Clone Name	baal26a06
Clone Library Name	barley_pub

---

No.	Definition	Score (bits)	E Value
1	gb|AC127433.1| Mus musculus BAC clone RP23-151I7 from 1, complet...	42	2.3
2	emb|CR931737.1| Medicago truncatula chromosome 5 clone mth2-65j2...	42	2.3
3	gb|AC087274.8| Homo sapiens chromosome 8, clone RP11-681J6, comp...	42	2.3
4	gb|AC021694.8| Homo sapiens, clone RP11-24F3, complete sequence	42	2.3
5	ref|NM_130057.2| Arabidopsis thaliana unknown protein AT2G44920 ...	40	9.1
6	ref|NM_130056.4| Arabidopsis thaliana unknown protein AT2G44920 ...	40	9.1
7	ref|XM_642128.1| Dictyostelium discoideum RGS domain-containing ...	40	9.1
8	gb|AY234384.1|AY234384S1 Rubrivivax gelatinosus strain S1 5' reg...	40	9.1
9	gb|AC159991.9| Mus musculus chromosome 1, clone RP23-413H17, com...	40	9.1
10	ref|XM_716931.1| Candida albicans SC5314 putative cytoplasmic me...	40	9.1
11	ref|XM_716771.1| Candida albicans SC5314 putative cytoplasmic me...	40	9.1
12	gb|CP000233.1| Lactobacillus salivarius subsp. salivarius UCC118...	40	9.1
13	gb|AC118704.17| Mus musculus chromosome 13, clone RP24-114K21, c...	40	9.1
14	gb|AC105052.3| Homo sapiens BAC clone RP11-577H5 from 7, complet...	40	9.1
15	gb|AC006477.4| Homo sapiens PAC clone RP4-802G15 from 7, complet...	40	9.1
16	gb|AC144808.2| Mus musculus BAC clone RP24-434O1 from chromosome...	40	9.1
17	ref|XM_745197.1| Aspergillus fumigatus Af293 hypothetical protei...	40	9.1
18	gb|BT000902.1| Arabidopsis thaliana clone C105048 unknown protei...	40	9.1
19	gb|AY050941.2| Arabidopsis thaliana At2g44920 mRNA sequence	40	9.1
20	emb|BX640442.1| Bordetella bronchiseptica strain RB50, complete ...	40	9.1
21	emb|BX640430.1| Bordetella parapertussis strain 12822, complete ...	40	9.1
22	emb|BX640416.1| Bordetella pertussis strain Tohama I, complete g...	40	9.1
23	gb|AC152419.2| Pan troglodytes BAC clone RP43-4P10 from chromoso...	40	9.1
24	emb|AL596167.1| Listeria innocua Clip11262 complete genome, segm...	40	9.1
25	emb|BX950214.7| Zebrafish DNA sequence from clone CH211-214C2 in...	40	9.1
26	dbj|AB243297.1| Rhizosolenia setigera RNA virus RsRNAV ORF-1, Rs...	40	9.1
27	gb|AC002388.3| Arabidopsis thaliana chromosome 2 clone T13E15 ma...	40	9.1
28	gb|AC005925.1| Homo sapiens 12p13.3 PAC RPCI1-41B7 (Roswell Park...	40	9.1
29	ref|XM_628231.1| Cryptosporidium parvum Iowa II hypothetical pro...	40	9.1
30	gb|AY033393.1| Ovis aries estrogen receptor alpha mRNA, partial cds	40	9.1
31	dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D...	40	9.1
32	emb|BX822009.1|CNS0AA4Z Arabidopsis thaliana Full-length cDNA Co...	40	9.1
33	gb|AC010900.12| Homo sapiens BAC clone RP11-544H14 from 2, compl...	40	9.1
34	ref|NM_205829.1| Xenopus tropicalis hypothetical protein MGC7584...	40	9.1
35	dbj|AP005735.3| Oryza sativa (japonica cultivar-group) genomic D...	40	9.1
36	gb|BC066129.1| Xenopus tropicalis hypothetical protein MGC75848,...	40	9.1
37	emb|AL749527.1| Zebrafish DNA sequence from clone XX-180I15 in l...	40	9.1
38	emb|CR761091.2| Xenopus tropicalis finished cDNA, clone TEgg073i18	40	9.1
39	gb|AC102099.14| Mus musculus chromosome 5, clone RP23-52A2, comp...	40	9.1
40	gb|AC172110.2| Rhesus Macaque CHR7 BAC CH250-119L7 (Children's H...	40	9.1

---

>gb|AC127433.1| Mus musculus BAC clone RP23-151I7 from 1, complete sequence
          Length = 228489

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 91     tgcagcagcctgcacactgctcagc 115
              |||| ||||||||||||||||||||
Sbjct: 121379 tgcaacagcctgcacactgctcagc 121403

---

>emb|CR931737.1| Medicago truncatula chromosome 5 clone mth2-65j24, COMPLETE SEQUENCE
          Length = 126498

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 146   agtgatgatgatggttttaccaaca 170
             |||||||||| ||||||||||||||
Sbjct: 99130 agtgatgatgctggttttaccaaca 99106

---

>gb|AC087274.8| Homo sapiens chromosome 8, clone RP11-681J6, complete sequence
          Length = 191786

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 93    cagcagcctgcacactgctcagcac 117
             |||||||| ||||||||||||||||
Sbjct: 14655 cagcagccagcacactgctcagcac 14631

---

>gb|AC021694.8| Homo sapiens, clone RP11-24F3, complete sequence
          Length = 149179

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 199  aatggaatttgctatttgcta 219
            |||||||||||||||||||||
Sbjct: 8999 aatggaatttgctatttgcta 9019

---

>ref|NM_130057.2| Arabidopsis thaliana unknown protein AT2G44920 transcript variant
           AT2G44920.1 mRNA, complete cds
          Length = 1050

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 259 caactttgcacccttgaagt 278
           ||||||||||||||||||||
Sbjct: 398 caactttgcacccttgaagt 379

---

>ref|NM_130056.4| Arabidopsis thaliana unknown protein AT2G44920 transcript variant
           AT2G44920.2 mRNA, complete cds
          Length = 1014

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 259 caactttgcacccttgaagt 278
           ||||||||||||||||||||
Sbjct: 398 caactttgcacccttgaagt 379

---

>ref|XM_642128.1| Dictyostelium discoideum RGS domain-containing protein (DDB0229847),
            partial mRNA
          Length = 6693

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 141  tattaagtgatgatgatggt 160
            ||||||||||||||||||||
Sbjct: 1735 tattaagtgatgatgatggt 1716

---

>gb|AY234384.1|AY234384S1 Rubrivivax gelatinosus strain S1 5' region photosynthesis gene cluster,
             partial sequence
          Length = 24637

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 636   cggtggcggcgctgacgcgc 655
             ||||||||||||||||||||
Sbjct: 12071 cggtggcggcgctgacgcgc 12090

---

>gb|AC159991.9| Mus musculus chromosome 1, clone RP23-413H17, complete sequence
          Length = 180715

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 621   tgttcctgagctccacggtg 640
             ||||||||||||||||||||
Sbjct: 97617 tgttcctgagctccacggtg 97636

---

>ref|XM_716931.1| Candida albicans SC5314 putative cytoplasmic methionyl tRNA
           synthetase (CaO19_11437), mRNA
          Length = 2247

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 225 atatatttttgaaattgcac 244
           ||||||||||||||||||||
Sbjct: 872 atatatttttgaaattgcac 891

---

>ref|XM_716771.1| Candida albicans SC5314 putative cytoplasmic methionyl tRNA
           synthetase (CaO19_3955), mRNA
          Length = 2247

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 225 atatatttttgaaattgcac 244
           ||||||||||||||||||||
Sbjct: 872 atatatttttgaaattgcac 891

---

>gb|CP000233.1| Lactobacillus salivarius subsp. salivarius UCC118, complete genome
          Length = 1827111

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 576    ttgatgatgatactgctatg 595
              ||||||||||||||||||||
Sbjct: 312494 ttgatgatgatactgctatg 312513

---

>gb|AC118704.17| Mus musculus chromosome 13, clone RP24-114K21, complete sequence
          Length = 197574

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 101   tgcacactgctcagcactgtctgc 124
             ||||||| ||||||||||||||||
Sbjct: 91038 tgcacaccgctcagcactgtctgc 91015

---

>gb|AC105052.3| Homo sapiens BAC clone RP11-577H5 from 7, complete sequence
          Length = 186465

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 255    tgcccaactttgcacccttg 274
              ||||||||||||||||||||
Sbjct: 177621 tgcccaactttgcacccttg 177602

---

>gb|AC006477.4| Homo sapiens PAC clone RP4-802G15 from 7, complete sequence
          Length = 121520

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 255   tgcccaactttgcacccttg 274
             ||||||||||||||||||||
Sbjct: 53535 tgcccaactttgcacccttg 53516

---

>gb|AC144808.2| Mus musculus BAC clone RP24-434O1 from chromosome 5, complete sequence
          Length = 152463

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 91    tgcagcagcctgcacactgc 110
             ||||||||||||||||||||
Sbjct: 45063 tgcagcagcctgcacactgc 45082

---

>ref|XM_745197.1| Aspergillus fumigatus Af293 hypothetical protein (Afu1g05410)
           partial mRNA
          Length = 1854

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 612 agttcctcttgttcctgagc 631
           ||||||||||||||||||||
Sbjct: 557 agttcctcttgttcctgagc 538

---

>gb|BT000902.1| Arabidopsis thaliana clone C105048 unknown protein (At2g44920)
           mRNA, complete cds
          Length = 664

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 259 caactttgcacccttgaagt 278
           ||||||||||||||||||||
Sbjct: 384 caactttgcacccttgaagt 365

---

>gb|AY050941.2| Arabidopsis thaliana At2g44920 mRNA sequence
          Length = 612

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 259 caactttgcacccttgaagt 278
           ||||||||||||||||||||
Sbjct: 415 caactttgcacccttgaagt 396

---

>emb|BX640442.1| Bordetella bronchiseptica strain RB50, complete genome; segment 6/16
          Length = 349876

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 636   cggtggcggcgctgacgcgc 655
             ||||||||||||||||||||
Sbjct: 96179 cggtggcggcgctgacgcgc 96198

---

>emb|BX640430.1| Bordetella parapertussis strain 12822, complete genome; segment 8/14
          Length = 348014

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 636  cggtggcggcgctgacgcgc 655
            ||||||||||||||||||||
Sbjct: 7081 cggtggcggcgctgacgcgc 7100

---

>emb|BX640416.1| Bordetella pertussis strain Tohama I, complete genome; segment 6/12
          Length = 349354

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 636    cggtggcggcgctgacgcgc 655
              ||||||||||||||||||||
Sbjct: 291999 cggtggcggcgctgacgcgc 292018

---

>gb|AC152419.2| Pan troglodytes BAC clone RP43-4P10 from chromosome 7, complete sequence
          Length = 154622

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 255    tgcccaactttgcacccttg 274
              ||||||||||||||||||||
Sbjct: 139671 tgcccaactttgcacccttg 139652

---

>emb|AL596167.1| Listeria innocua Clip11262 complete genome, segment 5/12
          Length = 253050

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 158    ggttttaccaacaaagaaattagt 181
              |||||||| |||||||||||||||
Sbjct: 209287 ggttttacaaacaaagaaattagt 209310

---

>emb|BX950214.7| Zebrafish DNA sequence from clone CH211-214C2 in linkage group 5,
              complete sequence
          Length = 197499

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 212    atttgctactcctatatatt 231
              ||||||||||||||||||||
Sbjct: 131378 atttgctactcctatatatt 131397

---

>dbj|AB243297.1| Rhizosolenia setigera RNA virus RsRNAV ORF-1, RsRNAV ORF-2 genes for
            polyprotein, capsid proteins, complete cds
          Length = 8877

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 577  tgatgatgatactgctatgg 596
            ||||||||||||||||||||
Sbjct: 1425 tgatgatgatactgctatgg 1444

---

>gb|AC002388.3| Arabidopsis thaliana chromosome 2 clone T13E15 map m336, complete
             sequence
          Length = 85534

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 259   caactttgcacccttgaagt 278
             ||||||||||||||||||||
Sbjct: 27691 caactttgcacccttgaagt 27710

---

>gb|AC005925.1| Homo sapiens 12p13.3 PAC RPCI1-41B7 (Roswell Park Cancer Institute
            Human PAC Library) complete sequence
          Length = 40446

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 90   ttgcagcagcctgcacactg 109
            ||||||||||||||||||||
Sbjct: 6548 ttgcagcagcctgcacactg 6529

---

>ref|XM_628231.1| Cryptosporidium parvum Iowa II hypothetical protein (cgd7_420),
            partial mRNA
          Length = 6129

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 125  aatttccaagtatttctatt 144
            ||||||||||||||||||||
Sbjct: 5554 aatttccaagtatttctatt 5535

---

>gb|AY033393.1| Ovis aries estrogen receptor alpha mRNA, partial cds
          Length = 5653

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 224  tatatatttttgaaattgca 243
            ||||||||||||||||||||
Sbjct: 3341 tatatatttttgaaattgca 3360

---

>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 207      ttgctatttgctactcctatatat 230
                |||||| |||||||||||||||||
Sbjct: 19842952 ttgctaattgctactcctatatat 19842975

---

>emb|BX822009.1|CNS0AA4Z Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL91ZH02 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 971

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 259 caactttgcacccttgaagt 278
           ||||||||||||||||||||
Sbjct: 357 caactttgcacccttgaagt 338

---

>gb|AC010900.12| Homo sapiens BAC clone RP11-544H14 from 2, complete sequence
          Length = 208024

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 217    ctactcctatatatttttgaaatt 240
              |||||||| |||||||||||||||
Sbjct: 127411 ctactcctgtatatttttgaaatt 127388

---

>ref|NM_205829.1| Xenopus tropicalis hypothetical protein MGC75848 (MGC75848), mRNA
          Length = 2099

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 566 atggatcaacttgatgatga 585
           ||||||||||||||||||||
Sbjct: 727 atggatcaacttgatgatga 746

---

>dbj|AP005735.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OSJNBb0034B12
          Length = 124083

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 207   ttgctatttgctactcctatatat 230
             |||||| |||||||||||||||||
Sbjct: 67392 ttgctaattgctactcctatatat 67415

---

>gb|BC066129.1| Xenopus tropicalis hypothetical protein MGC75848, mRNA (cDNA clone
           MGC:75848 IMAGE:5382660), complete cds
          Length = 2099

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 566 atggatcaacttgatgatga 585
           ||||||||||||||||||||
Sbjct: 727 atggatcaacttgatgatga 746

---

>emb|AL749527.1| Zebrafish DNA sequence from clone XX-180I15 in linkage group 9,
             complete sequence
          Length = 61817

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 301   cttccggattttcagagaca 320
             ||||||||||||||||||||
Sbjct: 18241 cttccggattttcagagaca 18222

---

>emb|CR761091.2| Xenopus tropicalis finished cDNA, clone TEgg073i18
          Length = 2003

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 566 atggatcaacttgatgatga 585
           ||||||||||||||||||||
Sbjct: 679 atggatcaacttgatgatga 698

---

>gb|AC102099.14| Mus musculus chromosome 5, clone RP23-52A2, complete sequence
          Length = 235239

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 160    ttttaccaacaaagaaatta 179
              ||||||||||||||||||||
Sbjct: 138947 ttttaccaacaaagaaatta 138928

---

>gb|AC172110.2| Rhesus Macaque CHR7 BAC CH250-119L7 (Children's Hospital Oakland Research
              Institute Rhesus macaque Adult Male BAC Library) complete
              sequence
          Length = 219949

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 125    aatttccaagtatttctatt 144
              ||||||||||||||||||||
Sbjct: 219130 aatttccaagtatttctatt 219111


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,042,172
Number of Sequences: 3902068
Number of extensions: 6042172
Number of successful extensions: 107624
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 107510
Number of HSP's gapped (non-prelim): 114
length of query: 667
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 644
effective length of database: 17,143,297,704
effective search space: 11040283721376
effective search space used: 11040283721376
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

---