ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal25l05
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1C4D21_DROME (Q9VLZ7) Probable cytochrome P450 4d21 (EC 1.14.-.-)... 32 1.3
2GLMM_PROMP (Q7V349) Phosphoglucosamine mutase (EC 5.4.2.10) 30 6.7
3RBP2_PLAVB (Q00799) Reticulocyte-binding protein 2 precursor (Pv... 30 6.7
4TGM4_HUMAN (P49221) Protein-glutamine gamma-glutamyltransferase ... 29 8.7

>C4D21_DROME (Q9VLZ7) Probable cytochrome P450 4d21 (EC 1.14.-.-) (CYPIVD21)|
          Length = 511

 Score = 32.0 bits (71), Expect = 1.3
 Identities = 21/60 (35%), Positives = 31/60 (51%), Gaps = 5/60 (8%)
 Frame = +2

Query: 356 LIQTK*KRNMPSILSSQSL*KQAHL-----QLVYFNHLVSVSHRQTMRRNIMAQTLFMRC 520
           LI TK  +   SILSS +L K+AHL       +    L+S  ++ T RR ++A     +C
Sbjct: 80  LIYTKDLKYFESILSSSTLLKKAHLYRFLRDFLGDGLLLSTGNKWTSRRKVLAPAFHFKC 139



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>GLMM_PROMP (Q7V349) Phosphoglucosamine mutase (EC 5.4.2.10)|
          Length = 452

 Score = 29.6 bits (65), Expect = 6.7
 Identities = 22/103 (21%), Positives = 47/103 (45%)
 Frame = +1

Query: 178 LLGRNGTSLTSMPRKQLSMLLVESDSWDLKRDIPLRTRFSEMKQNGCESVFPQVILLALA 357
           +   NG  +      Q+ ++L  +++  LK     +T   E   N   +++ + ++  + 
Sbjct: 108 IFDNNGEKIKKKLENQIELILETANN--LKLSTYKKTSIRE--NNNLFNIYTEGLINTMG 163

Query: 358 DSDKMKAEYAIDSVITKPLKASTLAACLFQSLGISITQANNEK 486
           D +    +  +D+       A+T AA +FQ LG ++   NNE+
Sbjct: 164 DENLDGMKIVLDTCYGS---ATTCAASIFQKLGANVKVINNEQ 203



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>RBP2_PLAVB (Q00799) Reticulocyte-binding protein 2 precursor (PvRBP-2)|
          Length = 2867

 Score = 29.6 bits (65), Expect = 6.7
 Identities = 23/100 (23%), Positives = 45/100 (45%), Gaps = 4/100 (4%)
 Frame = +1

Query: 94   GATVTEYHLQRLGIASKSVRTIEQALSVLLGRNGTSLTSMPRKQLSMLLVESDSWDLKRD 273
            G T   Y+ ++   A++S   IEQ +++   + GTS TS    +L           +K +
Sbjct: 1287 GDTSNFYYTEQYNSATQSKAKIEQFINIATTKKGTSDTSQDINELE---------SIKEE 1337

Query: 274  IPLRTRFSEMKQNGCESVFPQVI----LLALADSDKMKAE 381
            +    +  + + N  E +  Q++    LL L +S+ +  E
Sbjct: 1338 VHKNLQLVKQESNSMEEMRKQILSMKDLLILNNSETIAKE 1377



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>TGM4_HUMAN (P49221) Protein-glutamine gamma-glutamyltransferase 4 (EC|
           2.3.2.13) (Transglutaminase-4) (TGase-4) (Prostate
           transglutaminase) (TGP) (TG(P)) (Prostate-specific
           transglutaminase) (Fibrinoligase)
          Length = 684

 Score = 29.3 bits (64), Expect = 8.7
 Identities = 20/78 (25%), Positives = 34/78 (43%), Gaps = 8/78 (10%)
 Frame = +1

Query: 70  CWLIKDQ*GATVTEYHLQRLGIASKSVRTIEQA--------LSVLLGRNGTSLTSMPRKQ 225
           CW+      A +    L+ LGI ++SV   + A        +   +  NG  +TSM    
Sbjct: 268 CWVF-----AGILTTVLRALGIPARSVTGFDSAHDTERNLTVDTYVNENGEKITSMTHDS 322

Query: 226 LSMLLVESDSWDLKRDIP 279
           +    V +D+W  + D+P
Sbjct: 323 VWNFHVWTDAWMKRPDLP 340


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 81,415,775
Number of Sequences: 219361
Number of extensions: 1661909
Number of successful extensions: 3620
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3558
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3620
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 5044307840
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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