ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal25k20 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT008979.1| Triticum aestivum clone wdk2c.pk005.k24:fis, full insert mRNA sequence Length = 1418 Score = 658 bits (332), Expect = 0.0 Identities = 383/399 (95%), Gaps = 1/399 (0%) Strand = Plus / Plus Query: 1 atttccggcggaacctcgcgccaggnatggcacccacggcgacggagccggagcagagcc 60 |||||||||||||||||||| |||| ||||||||||||||||||| | |||||||||||| Sbjct: 79 atttccggcggaacctcgcgtcagg-atggcacccacggcgacggcggcggagcagagcc 137 Query: 61 agcagcacacgaagaaggcggtgggcctggcggcgctcgacgcctccggccgcctctccc 120 ||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||| Sbjct: 138 agcagcacacgaagaaggcggtgggtctggcggcgctcgacgcctccggccacctctccc 197 Query: 121 cgctcgccatcacccgaagaagcaccggagacgacgatgtcatgataaagattctgtact 180 ||||||||||||||||||| ||||||||||| ||||||||| |||||||||||||||||| Sbjct: 198 cgctcgccatcacccgaaggagcaccggagatgacgatgtcgtgataaagattctgtact 257 Query: 181 gcgggatctgccactctgacctgcacagcatcaagaacgactggaagaacgctaagtacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 258 gcgggatctgccactctgacctgcacagcatcaagaacgactggaagaacgccaagtacc 317 Query: 241 ccatgatccctgggcacgagatcgccggcgaggtcaccgaggtcggcaagaacgtgacca 300 ||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 318 ccatgattcccgggcacgagatcgccggcgaggtcaccgaggtcggcaagaacgtgacca 377 Query: 301 agttcaaggccggcgaccgtgtcggtgtcgggtgcatggtgaactcgtgccagtcctgcg 360 |||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 378 agttcaaggcaggcgaccgtgtcggcgtcgggtgcatggtgaactcgtgccagtcctgcg 437 Query: 361 agagctgcgacaagggcttngagaaccactgcccgggca 399 ||||||||||||||||||| ||||| ||||||||||||| Sbjct: 438 agagctgcgacaagggcttcgagaatcactgcccgggca 476
>gb|AF472592.1| Lolium perenne cinnamyl alcohol dehydrogenase (CAD2) mRNA, complete cds Length = 1378 Score = 416 bits (210), Expect = e-113 Identities = 332/373 (89%) Strand = Plus / Plus Query: 27 atggcacccacggcgacggagccggagcagagccagcagcacacgaagaaggcggtgggc 86 ||||||||||||||| |||||| | | || ||| |||||||| | |||||||||||| Sbjct: 102 atggcacccacggcggcggagcagacggagcaccaccagcacaccaggaaggcggtgggg 161 Query: 87 ctggcggcgctcgacgcctccggccgcctctccccgctcgccatcacccgaagaagcacc 146 |||||||||| ||||| | |||||| ||||||||||||||||||||| || || ||||| Sbjct: 162 ctggcggcgcgcgacgacgccggccacctctccccgctcgccatcacacggaggagcaca 221 Query: 147 ggagacgacgatgtcatgataaagattctgtactgcgggatctgccactctgacctgcac 206 |||||||||||||| ||||||||||| |||||||||| ||||||||||||||||||||| Sbjct: 222 ggagacgacgatgtggtgataaagattttgtactgcggaatctgccactctgacctgcac 281 Query: 207 agcatcaagaacgactggaagaacgctaagtaccccatgatccctgggcacgagatcgcc 266 | | |||||||||||||||||| | | |||||| |||||||| ||||||||||||||| Sbjct: 282 gccctgaagaacgactggaagaactcaaggtacccgatgatccccgggcacgagatcgcc 341 Query: 267 ggcgaggtcaccgaggtcggcaagaacgtgaccaagttcaaggccggcgaccgtgtcggt 326 ||||||||||| ||||| ||||||||||||| ||||||||||||||||||||| || || Sbjct: 342 ggcgaggtcacggaggtgggcaagaacgtgagcaagttcaaggccggcgaccgcgtgggc 401 Query: 327 gtcgggtgcatggtgaactcgtgccagtcctgcgagagctgcgacaagggcttngagaac 386 ||||||||||||||||||||||||| ||| ||||||||||||||||||||||| |||||| Sbjct: 402 gtcgggtgcatggtgaactcgtgccggtcgtgcgagagctgcgacaagggcttcgagaac 461 Query: 387 cactgcccgggca 399 ||||||||||||| Sbjct: 462 cactgcccgggca 474
>dbj|AK099176.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023090E20, full insert sequence Length = 1394 Score = 258 bits (130), Expect = 1e-65 Identities = 273/321 (85%) Strand = Plus / Plus Query: 76 aggcggtgggcctggcggcgctcgacgcctccggccgcctctccccgctcgccatcaccc 135 |||||||||| |||||||||| |||| ||||||||| ||||||||| |||||||| ||| Sbjct: 123 aggcggtggggctggcggcgcgcgactcctccggccacctctcccctttcgccatctccc 182 Query: 136 gaagaagcaccggagacgacgatgtcatgataaagattctgtactgcgggatctgccact 195 | || ||||| ||||| |||||||| |||||||||||||| ||| || |||||||||| Sbjct: 183 ggaggagcactggagatgacgatgtggcgataaagattctgttctgtggaatctgccact 242 Query: 196 ctgacctgcacagcatcaagaacgactggaagaacgctaagtaccccatgatccctgggc 255 ||||||||||| |||||||||| || |||||| || | | ||||| | | ||||||| Sbjct: 243 ctgacctgcactgcatcaagaatgagtggaagcactccatctacccacttgttcctgggc 302 Query: 256 acgagatcgccggcgaggtcaccgaggtcggcaagaacgtgaccaagttcaaggccggcg 315 ||||||||||||| | ||| || ||||| || |||||||| |||| |||||||||||||| Sbjct: 303 acgagatcgccggtgtggtgacggaggtggggaagaacgtcaccaggttcaaggccggcg 362 Query: 316 accgtgtcggtgtcgggtgcatggtgaactcgtgccagtcctgcgagagctgcgacaagg 375 || | ||||| || |||||||||||||||||||||| ||| ||||||||||| |||| | Sbjct: 363 acagggtcggcgtggggtgcatggtgaactcgtgccggtcatgcgagagctgtaacaatg 422 Query: 376 gcttngagaaccactgcccgg 396 |||| |||||||||||||||| Sbjct: 423 gcttcgagaaccactgcccgg 443
>dbj|AK069040.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023003B20, full insert sequence Length = 1565 Score = 258 bits (130), Expect = 1e-65 Identities = 273/321 (85%) Strand = Plus / Plus Query: 76 aggcggtgggcctggcggcgctcgacgcctccggccgcctctccccgctcgccatcaccc 135 |||||||||| |||||||||| |||| ||||||||| ||||||||| |||||||| ||| Sbjct: 245 aggcggtggggctggcggcgcgcgactcctccggccacctctcccctttcgccatctccc 304 Query: 136 gaagaagcaccggagacgacgatgtcatgataaagattctgtactgcgggatctgccact 195 | || ||||| ||||| |||||||| |||||||||||||| ||| || |||||||||| Sbjct: 305 ggaggagcactggagatgacgatgtggcgataaagattctgttctgtggaatctgccact 364 Query: 196 ctgacctgcacagcatcaagaacgactggaagaacgctaagtaccccatgatccctgggc 255 ||||||||||| |||||||||| || |||||| || | | ||||| | | ||||||| Sbjct: 365 ctgacctgcactgcatcaagaatgagtggaagcactccatctacccacttgttcctgggc 424 Query: 256 acgagatcgccggcgaggtcaccgaggtcggcaagaacgtgaccaagttcaaggccggcg 315 ||||||||||||| | ||| || ||||| || |||||||| |||| |||||||||||||| Sbjct: 425 acgagatcgccggtgtggtgacggaggtggggaagaacgtcaccaggttcaaggccggcg 484 Query: 316 accgtgtcggtgtcgggtgcatggtgaactcgtgccagtcctgcgagagctgcgacaagg 375 || | ||||| || |||||||||||||||||||||| ||| ||||||||||| |||| | Sbjct: 485 acagggtcggcgtggggtgcatggtgaactcgtgccggtcatgcgagagctgtaacaatg 544 Query: 376 gcttngagaaccactgcccgg 396 |||| |||||||||||||||| Sbjct: 545 gcttcgagaaccactgcccgg 565
>dbj|AK104047.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-022-H02, full insert sequence Length = 1416 Score = 250 bits (126), Expect = 3e-63 Identities = 272/321 (84%) Strand = Plus / Plus Query: 76 aggcggtgggcctggcggcgctcgacgcctccggccgcctctccccgctcgccatcaccc 135 |||||||||| |||||||||| |||| ||||||||| ||||||||| |||||||| ||| Sbjct: 159 aggcggtggggctggcggcgcgcgactcctccggccacctctcccctttcgccatctccc 218 Query: 136 gaagaagcaccggagacgacgatgtcatgataaagattctgtactgcgggatctgccact 195 | || ||||| ||||| |||||||| |||||||||||||| ||| || |||||||||| Sbjct: 219 ggaggagcactggagatgacgatgtggcgataaagattctgttctgtggaatctgccact 278 Query: 196 ctgacctgcacagcatcaagaacgactggaagaacgctaagtaccccatgatccctgggc 255 ||||||||||| |||||||||| || |||||| || | | ||||| | | ||||||| Sbjct: 279 ctgacctgcactgcatcaagaatgagtggaagcactccatctacccacttgttcctgggc 338 Query: 256 acgagatcgccggcgaggtcaccgaggtcggcaagaacgtgaccaagttcaaggccggcg 315 ||||||||||||| | ||| || ||||| || |||||||| |||| |||||||||||||| Sbjct: 339 acgagatcgccggtgtggtgacggaggtggggaagaacgtcaccaggttcaaggccggcg 398 Query: 316 accgtgtcggtgtcgggtgcatggtgaactcgtgccagtcctgcgagagctgcgacaagg 375 || | ||||| || |||||||||||||||||||||| ||| |||||| |||| |||| | Sbjct: 399 acagggtcggcgtggggtgcatggtgaactcgtgccggtcatgcgagggctgtaacaatg 458 Query: 376 gcttngagaaccactgcccgg 396 |||| |||||||||||||||| Sbjct: 459 gcttcgagaaccactgcccgg 479
>ref|NM_196623.1| Oryza sativa (japonica cultivar-group) putative cinnamyl alcohol dehydrogenase (OSJNBa0073D04.1), mRNA Length = 1491 Score = 200 bits (101), Expect = 2e-48 Identities = 217/256 (84%) Strand = Plus / Plus Query: 141 agcaccggagacgacgatgtcatgataaagattctgtactgcgggatctgccactctgac 200 ||||| ||||| |||||||| |||||||||||||| ||| || ||||||||||||||| Sbjct: 271 agcactggagatgacgatgtggcgataaagattctgttctgtggaatctgccactctgac 330 Query: 201 ctgcacagcatcaagaacgactggaagaacgctaagtaccccatgatccctgggcacgag 260 |||||| |||||||||| || |||||| || | | ||||| | | |||||||||||| Sbjct: 331 ctgcactgcatcaagaatgagtggaagcactccatctacccacttgttcctgggcacgag 390 Query: 261 atcgccggcgaggtcaccgaggtcggcaagaacgtgaccaagttcaaggccggcgaccgt 320 |||||||| | ||| || ||||| || |||||||| |||| |||||||||||||||| | Sbjct: 391 atcgccggtgtggtgacggaggtggggaagaacgtcaccaggttcaaggccggcgacagg 450 Query: 321 gtcggtgtcgggtgcatggtgaactcgtgccagtcctgcgagagctgcgacaagggcttn 380 ||||| || |||||||||||||||||||||| ||| ||||||||||| |||| ||||| Sbjct: 451 gtcggcgtggggtgcatggtgaactcgtgccggtcatgcgagagctgtaacaatggcttc 510 Query: 381 gagaaccactgcccgg 396 |||||||||||||||| Sbjct: 511 gagaaccactgcccgg 526
>gb|AY107698.1| Zea mays PCO143419 mRNA sequence Length = 1374 Score = 163 bits (82), Expect = 5e-37 Identities = 172/202 (85%) Strand = Plus / Plus Query: 169 agattctgtactgcgggatctgccactctgacctgcacagcatcaagaacgactggaaga 228 |||| |||||||||||||| ||||||||||||||||||| |||||||||||| ||||||| Sbjct: 263 agatactgtactgcgggatatgccactctgacctgcacaccatcaagaacgagtggaaga 322 Query: 229 acgctaagtaccccatgatccctgggcacgagatcgccggcgaggtcaccgaggtcggca 288 |||| || ||||| | |||||||||||||||||||||| | |||||||||| |||| Sbjct: 323 acgccaactaccctgttgtccctgggcacgagatcgccgggctgatcaccgaggttggca 382 Query: 289 agaacgtgaccaagttcaaggccggcgaccgtgtcggtgtcgggtgcatggtgaactcgt 348 ||||||||| | |||||| | ||| ||| || || |||||||||||||| ||| | | Sbjct: 383 agaacgtgaagaggttcaacgtcggagacaaggttggcgtcgggtgcatggtcaacacat 442 Query: 349 gccagtcctgcgagagctgcga 370 ||||||||||| |||||||||| Sbjct: 443 gccagtcctgcaagagctgcga 464
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 157 bits (79), Expect = 3e-35 Identities = 126/142 (88%) Strand = Plus / Minus Query: 253 ggcacgagatcgccggcgaggtcaccgaggtcggcaagaacgtgaccaagttcaaggccg 312 |||||||||||||||||| ||| || |||| |||||||||||||||||||||||||| || Sbjct: 10350041 ggcacgagatcgccggcgtggtgacggaggccggcaagaacgtgaccaagttcaagggcg 10349982 Query: 313 gcgaccgtgtcggtgtcgggtgcatggtgaactcgtgccagtcctgcgagagctgcgaca 372 ||||| || || |||||||||||||||||||||||||| |||||||| |||||| || Sbjct: 10349981 gcgacaaggtgggcgtcgggtgcatggtgaactcgtgccactcctgcgacagctgcaacc 10349922 Query: 373 agggcttngagaaccactgccc 394 |||| || |||||||||||||| Sbjct: 10349921 aggggttggagaaccactgccc 10349900 Score = 111 bits (56), Expect = 2e-21 Identities = 83/92 (90%) Strand = Plus / Minus Query: 141 agcaccggagacgacgatgtcatgataaagattctgtactgcgggatctgccactctgac 200 ||||| ||||| || ||||| ||||||||||||| ||||| |||||||||||||| ||| Sbjct: 10350590 agcactggagatgatgatgtggtgataaagattctttactgtgggatctgccactccgac 10350531 Query: 201 ctgcacagcatcaagaacgactggaagaacgc 232 |||||||||||||||||||| ||||||||||| Sbjct: 10350530 ctgcacagcatcaagaacgagtggaagaacgc 10350499 Score = 56.0 bits (28), Expect = 9e-05 Identities = 52/60 (86%) Strand = Plus / Minus Query: 77 ggcggtgggcctggcggcgctcgacgcctccggccgcctctccccgctcgccatcacccg 136 ||||| ||| ||||| |||| |||||| ||||||| ||||||||||||| ||||| |||| Sbjct: 10352018 ggcggcggggctggcagcgcgcgacgcgtccggccacctctccccgctcaccatctcccg 10351959 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 258 gagatcgccggcgaggtcac 277 |||||||||||||||||||| Sbjct: 1751714 gagatcgccggcgaggtcac 1751695
>dbj|AP005731.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0091D16 Length = 174222 Score = 157 bits (79), Expect = 3e-35 Identities = 126/142 (88%) Strand = Plus / Minus Query: 253 ggcacgagatcgccggcgaggtcaccgaggtcggcaagaacgtgaccaagttcaaggccg 312 |||||||||||||||||| ||| || |||| |||||||||||||||||||||||||| || Sbjct: 50999 ggcacgagatcgccggcgtggtgacggaggccggcaagaacgtgaccaagttcaagggcg 50940 Query: 313 gcgaccgtgtcggtgtcgggtgcatggtgaactcgtgccagtcctgcgagagctgcgaca 372 ||||| || || |||||||||||||||||||||||||| |||||||| |||||| || Sbjct: 50939 gcgacaaggtgggcgtcgggtgcatggtgaactcgtgccactcctgcgacagctgcaacc 50880 Query: 373 agggcttngagaaccactgccc 394 |||| || |||||||||||||| Sbjct: 50879 aggggttggagaaccactgccc 50858 Score = 111 bits (56), Expect = 2e-21 Identities = 83/92 (90%) Strand = Plus / Minus Query: 141 agcaccggagacgacgatgtcatgataaagattctgtactgcgggatctgccactctgac 200 ||||| ||||| || ||||| ||||||||||||| ||||| |||||||||||||| ||| Sbjct: 51548 agcactggagatgatgatgtggtgataaagattctttactgtgggatctgccactccgac 51489 Query: 201 ctgcacagcatcaagaacgactggaagaacgc 232 |||||||||||||||||||| ||||||||||| Sbjct: 51488 ctgcacagcatcaagaacgagtggaagaacgc 51457 Score = 56.0 bits (28), Expect = 9e-05 Identities = 52/60 (86%) Strand = Plus / Minus Query: 77 ggcggtgggcctggcggcgctcgacgcctccggccgcctctccccgctcgccatcacccg 136 ||||| ||| ||||| |||| |||||| ||||||| ||||||||||||| ||||| |||| Sbjct: 52976 ggcggcggggctggcagcgcgcgacgcgtccggccacctctccccgctcaccatctcccg 52917
>gb|AC087542.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone nbxb0073D04, complete sequence Length = 155372 Score = 145 bits (73), Expect = 1e-31 Identities = 126/144 (87%) Strand = Plus / Minus Query: 253 ggcacgagatcgccggcgaggtcaccgaggtcggcaagaacgtgaccaagttcaaggccg 312 |||||||||||||||| | ||| || ||||| || |||||||| |||| ||||||||||| Sbjct: 116107 ggcacgagatcgccggtgtggtgacggaggtggggaagaacgtcaccaggttcaaggccg 116048 Query: 313 gcgaccgtgtcggtgtcgggtgcatggtgaactcgtgccagtcctgcgagagctgcgaca 372 ||||| | ||||| || |||||||||||||||||||||| ||| ||||||||||| ||| Sbjct: 116047 gcgacagggtcggcgtggggtgcatggtgaactcgtgccggtcatgcgagagctgtaaca 115988 Query: 373 agggcttngagaaccactgcccgg 396 | ||||| |||||||||||||||| Sbjct: 115987 atggcttcgagaaccactgcccgg 115964 Score = 85.7 bits (43), Expect = 1e-13 Identities = 76/87 (87%) Strand = Plus / Minus Query: 141 agcaccggagacgacgatgtcatgataaagattctgtactgcgggatctgccactctgac 200 ||||| ||||| |||||||| |||||||||||||| ||| || ||||||||||||||| Sbjct: 116493 agcactggagatgacgatgtggcgataaagattctgttctgtggaatctgccactctgac 116434 Query: 201 ctgcacagcatcaagaacgactggaag 227 |||||| |||||||||| || |||||| Sbjct: 116433 ctgcactgcatcaagaatgagtggaag 116407
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 145 bits (73), Expect = 1e-31 Identities = 126/144 (87%) Strand = Plus / Minus Query: 253 ggcacgagatcgccggcgaggtcaccgaggtcggcaagaacgtgaccaagttcaaggccg 312 |||||||||||||||| | ||| || ||||| || |||||||| |||| ||||||||||| Sbjct: 14790958 ggcacgagatcgccggtgtggtgacggaggtggggaagaacgtcaccaggttcaaggccg 14790899 Query: 313 gcgaccgtgtcggtgtcgggtgcatggtgaactcgtgccagtcctgcgagagctgcgaca 372 ||||| | ||||| || |||||||||||||||||||||| ||| ||||||||||| ||| Sbjct: 14790898 gcgacagggtcggcgtggggtgcatggtgaactcgtgccggtcatgcgagagctgtaaca 14790839 Query: 373 agggcttngagaaccactgcccgg 396 | ||||| |||||||||||||||| Sbjct: 14790838 atggcttcgagaaccactgcccgg 14790815 Score = 85.7 bits (43), Expect = 1e-13 Identities = 76/87 (87%) Strand = Plus / Minus Query: 141 agcaccggagacgacgatgtcatgataaagattctgtactgcgggatctgccactctgac 200 ||||| ||||| |||||||| |||||||||||||| ||| || ||||||||||||||| Sbjct: 14791344 agcactggagatgacgatgtggcgataaagattctgttctgtggaatctgccactctgac 14791285 Query: 201 ctgcacagcatcaagaacgactggaag 227 |||||| |||||||||| || |||||| Sbjct: 14791284 ctgcactgcatcaagaatgagtggaag 14791258
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 145 bits (73), Expect = 1e-31 Identities = 126/144 (87%) Strand = Plus / Minus Query: 253 ggcacgagatcgccggcgaggtcaccgaggtcggcaagaacgtgaccaagttcaaggccg 312 |||||||||||||||| | ||| || ||||| || |||||||| |||| ||||||||||| Sbjct: 14799199 ggcacgagatcgccggtgtggtgacggaggtggggaagaacgtcaccaggttcaaggccg 14799140 Query: 313 gcgaccgtgtcggtgtcgggtgcatggtgaactcgtgccagtcctgcgagagctgcgaca 372 ||||| | ||||| || |||||||||||||||||||||| ||| ||||||||||| ||| Sbjct: 14799139 gcgacagggtcggcgtggggtgcatggtgaactcgtgccggtcatgcgagagctgtaaca 14799080 Query: 373 agggcttngagaaccactgcccgg 396 | ||||| |||||||||||||||| Sbjct: 14799079 atggcttcgagaaccactgcccgg 14799056 Score = 85.7 bits (43), Expect = 1e-13 Identities = 76/87 (87%) Strand = Plus / Minus Query: 141 agcaccggagacgacgatgtcatgataaagattctgtactgcgggatctgccactctgac 200 ||||| ||||| |||||||| |||||||||||||| ||| || ||||||||||||||| Sbjct: 14799585 agcactggagatgacgatgtggcgataaagattctgttctgtggaatctgccactctgac 14799526 Query: 201 ctgcacagcatcaagaacgactggaag 227 |||||| |||||||||| || |||||| Sbjct: 14799525 ctgcactgcatcaagaatgagtggaag 14799499
>ref|XM_473865.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1233 Score = 95.6 bits (48), Expect = 1e-16 Identities = 147/180 (81%) Strand = Plus / Plus Query: 165 ataaagattctgtactgcgggatctgccactctgacctgcacagcatcaagaacgactgg 224 |||||| | |||||||| ||||| || |||||||||||||||| ||||||||| || ||| Sbjct: 154 ataaaggtgctgtactgtgggatttgtcactctgacctgcacaccatcaagaatgagtgg 213 Query: 225 aagaacgctaagtaccccatgatccctgggcacgagatcgccggcgaggtcaccgaggtc 284 | |||||| ||||| | | | |||||||||||| |||| | ||| |||||||| Sbjct: 214 agaaacgctgtctacccagttgttgcagggcacgagatcaccggggtggtgaccgaggtg 273 Query: 285 ggcaagaacgtgaccaagttcaaggccggcgaccgtgtcggtgtcgggtgcatggtgaac 344 || ||||||||| | | |||||||||||||||| ||||| |||||||||||||||||| Sbjct: 274 gggaagaacgtggcgaggttcaaggccggcgacgaggtcggcgtcgggtgcatggtgaac 333
>dbj|AK102452.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033093P08, full insert sequence Length = 1329 Score = 95.6 bits (48), Expect = 1e-16 Identities = 147/180 (81%) Strand = Plus / Plus Query: 165 ataaagattctgtactgcgggatctgccactctgacctgcacagcatcaagaacgactgg 224 |||||| | |||||||| ||||| || |||||||||||||||| ||||||||| || ||| Sbjct: 200 ataaaggtgctgtactgtgggatttgtcactctgacctgcacaccatcaagaatgagtgg 259 Query: 225 aagaacgctaagtaccccatgatccctgggcacgagatcgccggcgaggtcaccgaggtc 284 | |||||| ||||| | | | |||||||||||| |||| | ||| |||||||| Sbjct: 260 agaaacgctgtctacccagttgttgcagggcacgagatcaccggggtggtgaccgaggtg 319 Query: 285 ggcaagaacgtgaccaagttcaaggccggcgaccgtgtcggtgtcgggtgcatggtgaac 344 || ||||||||| | | |||||||||||||||| ||||| |||||||||||||||||| Sbjct: 320 gggaagaacgtggcgaggttcaaggccggcgacgaggtcggcgtcgggtgcatggtgaac 379
>gb|AY104431.1| Zea mays PCO149657 mRNA sequence Length = 1491 Score = 85.7 bits (43), Expect = 1e-13 Identities = 115/139 (82%) Strand = Plus / Plus Query: 149 agacgacgatgtcatgataaagattctgtactgcgggatctgccactctgacctgcacag 208 |||||||||||||| ||| ||| | || |||||||||||||||||| | ||||||||| Sbjct: 318 agacgacgatgtcacgatcaaggtgctctactgcgggatctgccacaccgacctgcacgt 377 Query: 209 catcaagaacgactggaagaacgctaagtaccccatgatccctgggcacgagatcgccgg 268 |||||||||||||||| ||||| | |||||| | |||| ||||||||||||| || Sbjct: 378 catcaagaacgactggcgaaacgccatgtacccagtcgtcccggggcacgagatcgtggg 437 Query: 269 cgaggtcaccgaggtcggc 287 || ||| ||||| |||||| Sbjct: 438 cgtggtgaccgacgtcggc 456
>dbj|AK067085.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013096I15, full insert sequence Length = 1916 Score = 81.8 bits (41), Expect = 2e-12 Identities = 116/141 (82%) Strand = Plus / Plus Query: 177 tactgcgggatctgccactctgacctgcacagcatcaagaacgactggaagaacgctaag 236 |||||||| ||||||||| |||||||||||| | ||||||| || ||| ||||| | | Sbjct: 730 tactgcggcatctgccacactgacctgcacatcgtcaagaatgattggggcaacgccatg 789 Query: 237 taccccatgatccctgggcacgagatcgccggcgaggtcaccgaggtcggcaagaacgtg 296 |||||||| |||| || |||||||||| ||||| ||||||| |||||| |||| Sbjct: 790 taccccatcgtccccggccacgagatcgtcggcgtcgtcaccggcgtcggcgccggcgtg 849 Query: 297 accaagttcaaggccggcgac 317 ||||||||||||||||||||| Sbjct: 850 accaagttcaaggccggcgac 870
>emb|AL731610.4|OSJN00255 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0070C17, complete sequence Length = 160484 Score = 79.8 bits (40), Expect = 6e-12 Identities = 79/92 (85%) Strand = Plus / Plus Query: 253 ggcacgagatcgccggcgaggtcaccgaggtcggcaagaacgtgaccaagttcaaggccg 312 ||||||||||| |||| | ||| |||||||| || ||||||||| | | ||||||||||| Sbjct: 87986 ggcacgagatcaccggggtggtgaccgaggtggggaagaacgtggcgaggttcaaggccg 88045 Query: 313 gcgaccgtgtcggtgtcgggtgcatggtgaac 344 ||||| ||||| |||||||||||||||||| Sbjct: 88046 gcgacgaggtcggcgtcgggtgcatggtgaac 88077 Score = 58.0 bits (29), Expect = 2e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 165 ataaagattctgtactgcgggatctgccactctgacctgcacagcatcaagaa 217 |||||| | |||||||| ||||| || |||||||||||||||| ||||||||| Sbjct: 87337 ataaaggtgctgtactgtgggatttgtcactctgacctgcacaccatcaagaa 87389 Score = 46.1 bits (23), Expect = 0.086 Identities = 47/55 (85%) Strand = Plus / Plus Query: 62 gcagcacacgaagaaggcggtgggcctggcggcgctcgacgcctccggccgcctc 116 |||||| |||| |||||||||||| || || |||| ||||| |||||||| |||| Sbjct: 85713 gcagcatacgaggaaggcggtggggctcgccgcgcacgacgactccggccacctc 85767
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 79.8 bits (40), Expect = 6e-12 Identities = 79/92 (85%) Strand = Plus / Plus Query: 253 ggcacgagatcgccggcgaggtcaccgaggtcggcaagaacgtgaccaagttcaaggccg 312 ||||||||||| |||| | ||| |||||||| || ||||||||| | | ||||||||||| Sbjct: 31105905 ggcacgagatcaccggggtggtgaccgaggtggggaagaacgtggcgaggttcaaggccg 31105964 Query: 313 gcgaccgtgtcggtgtcgggtgcatggtgaac 344 ||||| ||||| |||||||||||||||||| Sbjct: 31105965 gcgacgaggtcggcgtcgggtgcatggtgaac 31105996 Score = 58.0 bits (29), Expect = 2e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 165 ataaagattctgtactgcgggatctgccactctgacctgcacagcatcaagaa 217 |||||| | |||||||| ||||| || |||||||||||||||| ||||||||| Sbjct: 31105256 ataaaggtgctgtactgtgggatttgtcactctgacctgcacaccatcaagaa 31105308 Score = 52.0 bits (26), Expect = 0.001 Identities = 128/162 (79%) Strand = Plus / Minus Query: 176 gtactgcgggatctgccactctgacctgcacagcatcaagaacgactggaagaacgctaa 235 |||||||||||| |||||| | ||||||||| |||| | ||||||||| || | | | Sbjct: 8596996 gtactgcgggatgtgccacacggacctgcacttcatccacaacgactgggggatcaccat 8596937 Query: 236 gtaccccatgatccctgggcacgagatcgccggcgaggtcaccgaggtcggcaagaacgt 295 |||||| || | || |||||||||||| |||||| ||| ||| |||| |||| ||||| Sbjct: 8596936 gtacccggtggtgccggggcacgagatcaccggcgtggtgaccaaggtgggcaccaacgt 8596877 Query: 296 gaccaagttcaaggccggcgaccgtgtcggtgtcgggtgcat 337 | || |||||||| |||||||| || || || |||||||| Sbjct: 8596876 ggccgggttcaaggtgggcgaccgcgtgggcgtggggtgcat 8596835 Score = 46.1 bits (23), Expect = 0.086 Identities = 47/55 (85%) Strand = Plus / Plus Query: 62 gcagcacacgaagaaggcggtgggcctggcggcgctcgacgcctccggccgcctc 116 |||||| |||| |||||||||||| || || |||| ||||| |||||||| |||| Sbjct: 31103632 gcagcatacgaggaaggcggtggggctcgccgcgcacgacgactccggccacctc 31103686
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 73.8 bits (37), Expect = 4e-10 Identities = 115/141 (81%) Strand = Plus / Plus Query: 177 tactgcgggatctgccactctgacctgcacagcatcaagaacgactggaagaacgctaag 236 ||||| || ||||||||| | |||||||||| |||||||||||| ||| ||||| | | Sbjct: 13947044 tactgtggcatctgccacaccgacctgcacatcatcaagaacgagtggggcaacgccatg 13947103 Query: 237 taccccatgatccctgggcacgagatcgccggcgaggtcaccgaggtcggcaagaacgtg 296 |||||| | |||| ||||||||||||| ||||| ||||||| |||||| |||| Sbjct: 13947104 taccccgtcgtccccgggcacgagatcgtcggcgtcgtcaccggcgtcggcgccggcgtg 13947163 Query: 297 accaagttcaaggccggcgac 317 || |||||||||||||||||| Sbjct: 13947164 acaaagttcaaggccggcgac 13947184 Score = 73.8 bits (37), Expect = 4e-10 Identities = 115/141 (81%) Strand = Plus / Plus Query: 177 tactgcgggatctgccactctgacctgcacagcatcaagaacgactggaagaacgctaag 236 |||||||| ||||||||| |||||||||||| | ||||||| || ||| ||||| | | Sbjct: 13940740 tactgcggcatctgccacactgacctgcacatcgtcaagaatgattggggcaacgccatg 13940799 Query: 237 taccccatgatccctgggcacgagatcgccggcgaggtcaccgaggtcggcaagaacgtg 296 |||||| | |||| || |||||||||| ||||| ||||||| |||||| |||| Sbjct: 13940800 taccccgtcgtccccggccacgagatcgtcggcgtcgtcaccggcgtcggcgccggcgtg 13940859 Query: 297 accaagttcaaggccggcgac 317 ||||||||||||||||||||| Sbjct: 13940860 accaagttcaaggccggcgac 13940880 Score = 65.9 bits (33), Expect = 9e-08 Identities = 114/141 (80%) Strand = Plus / Minus Query: 177 tactgcgggatctgccactctgacctgcacagcatcaagaacgactggaagaacgctaag 236 |||||||| ||||||||| | ||||||||| | |||||||||| ||| ||||| | | Sbjct: 13933379 tactgcggcatctgccacaccgacctgcacgtcgtcaagaacgattggggcaacgccatg 13933320 Query: 237 taccccatgatccctgggcacgagatcgccggcgaggtcaccgaggtcggcaagaacgtg 296 |||||| | |||| || |||||||||| ||||| ||||||| |||||| |||| Sbjct: 13933319 taccccgtcgtccccggccacgagatcgtcggcgtcgtcaccggcgtcggcgccggcgtg 13933260 Query: 297 accaagttcaaggccggcgac 317 ||||||||||||||||||||| Sbjct: 13933259 accaagttcaaggccggcgac 13933239 Score = 58.0 bits (29), Expect = 2e-05 Identities = 113/141 (80%) Strand = Plus / Minus Query: 177 tactgcgggatctgccactctgacctgcacagcatcaagaacgactggaagaacgctaag 236 |||||||| ||||| ||| | |||||||||| |||||||||||| ||| ||||| | | Sbjct: 13929501 tactgcggcatctgtcacaccgacctgcacaccatcaagaacgagtggggcaacgccatg 13929442 Query: 237 taccccatgatccctgggcacgagatcgccggcgaggtcaccgaggtcggcaagaacgtg 296 |||||| | |||| || |||||||||| ||||| ||| ||| |||||| |||| Sbjct: 13929441 taccccgtcgtccccggccacgagatcgtcggcgtcgtcgccggcgtcggcgccggcgtg 13929382 Query: 297 accaagttcaaggccggcgac 317 |||| |||||||||||||||| Sbjct: 13929381 accaggttcaaggccggcgac 13929361
>dbj|AP005421.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0435D08 Length = 148912 Score = 73.8 bits (37), Expect = 4e-10 Identities = 115/141 (81%) Strand = Plus / Plus Query: 177 tactgcgggatctgccactctgacctgcacagcatcaagaacgactggaagaacgctaag 236 ||||| || ||||||||| | |||||||||| |||||||||||| ||| ||||| | | Sbjct: 100721 tactgtggcatctgccacaccgacctgcacatcatcaagaacgagtggggcaacgccatg 100780 Query: 237 taccccatgatccctgggcacgagatcgccggcgaggtcaccgaggtcggcaagaacgtg 296 |||||| | |||| ||||||||||||| ||||| ||||||| |||||| |||| Sbjct: 100781 taccccgtcgtccccgggcacgagatcgtcggcgtcgtcaccggcgtcggcgccggcgtg 100840 Query: 297 accaagttcaaggccggcgac 317 || |||||||||||||||||| Sbjct: 100841 acaaagttcaaggccggcgac 100861 Score = 73.8 bits (37), Expect = 4e-10 Identities = 115/141 (81%) Strand = Plus / Plus Query: 177 tactgcgggatctgccactctgacctgcacagcatcaagaacgactggaagaacgctaag 236 |||||||| ||||||||| |||||||||||| | ||||||| || ||| ||||| | | Sbjct: 94417 tactgcggcatctgccacactgacctgcacatcgtcaagaatgattggggcaacgccatg 94476 Query: 237 taccccatgatccctgggcacgagatcgccggcgaggtcaccgaggtcggcaagaacgtg 296 |||||| | |||| || |||||||||| ||||| ||||||| |||||| |||| Sbjct: 94477 taccccgtcgtccccggccacgagatcgtcggcgtcgtcaccggcgtcggcgccggcgtg 94536 Query: 297 accaagttcaaggccggcgac 317 ||||||||||||||||||||| Sbjct: 94537 accaagttcaaggccggcgac 94557 Score = 65.9 bits (33), Expect = 9e-08 Identities = 114/141 (80%) Strand = Plus / Minus Query: 177 tactgcgggatctgccactctgacctgcacagcatcaagaacgactggaagaacgctaag 236 |||||||| ||||||||| | ||||||||| | |||||||||| ||| ||||| | | Sbjct: 87056 tactgcggcatctgccacaccgacctgcacgtcgtcaagaacgattggggcaacgccatg 86997 Query: 237 taccccatgatccctgggcacgagatcgccggcgaggtcaccgaggtcggcaagaacgtg 296 |||||| | |||| || |||||||||| ||||| ||||||| |||||| |||| Sbjct: 86996 taccccgtcgtccccggccacgagatcgtcggcgtcgtcaccggcgtcggcgccggcgtg 86937 Query: 297 accaagttcaaggccggcgac 317 ||||||||||||||||||||| Sbjct: 86936 accaagttcaaggccggcgac 86916 Score = 58.0 bits (29), Expect = 2e-05 Identities = 113/141 (80%) Strand = Plus / Minus Query: 177 tactgcgggatctgccactctgacctgcacagcatcaagaacgactggaagaacgctaag 236 |||||||| ||||| ||| | |||||||||| |||||||||||| ||| ||||| | | Sbjct: 83178 tactgcggcatctgtcacaccgacctgcacaccatcaagaacgagtggggcaacgccatg 83119 Query: 237 taccccatgatccctgggcacgagatcgccggcgaggtcaccgaggtcggcaagaacgtg 296 |||||| | |||| || |||||||||| ||||| ||| ||| |||||| |||| Sbjct: 83118 taccccgtcgtccccggccacgagatcgtcggcgtcgtcgccggcgtcggcgccggcgtg 83059 Query: 297 accaagttcaaggccggcgac 317 |||| |||||||||||||||| Sbjct: 83058 accaggttcaaggccggcgac 83038
>dbj|AP005321.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0650H04 Length = 134533 Score = 73.8 bits (37), Expect = 4e-10 Identities = 115/141 (81%) Strand = Plus / Plus Query: 177 tactgcgggatctgccactctgacctgcacagcatcaagaacgactggaagaacgctaag 236 ||||| || ||||||||| | |||||||||| |||||||||||| ||| ||||| | | Sbjct: 49518 tactgtggcatctgccacaccgacctgcacatcatcaagaacgagtggggcaacgccatg 49577 Query: 237 taccccatgatccctgggcacgagatcgccggcgaggtcaccgaggtcggcaagaacgtg 296 |||||| | |||| ||||||||||||| ||||| ||||||| |||||| |||| Sbjct: 49578 taccccgtcgtccccgggcacgagatcgtcggcgtcgtcaccggcgtcggcgccggcgtg 49637 Query: 297 accaagttcaaggccggcgac 317 || |||||||||||||||||| Sbjct: 49638 acaaagttcaaggccggcgac 49658 Score = 73.8 bits (37), Expect = 4e-10 Identities = 115/141 (81%) Strand = Plus / Plus Query: 177 tactgcgggatctgccactctgacctgcacagcatcaagaacgactggaagaacgctaag 236 |||||||| ||||||||| |||||||||||| | ||||||| || ||| ||||| | | Sbjct: 43214 tactgcggcatctgccacactgacctgcacatcgtcaagaatgattggggcaacgccatg 43273 Query: 237 taccccatgatccctgggcacgagatcgccggcgaggtcaccgaggtcggcaagaacgtg 296 |||||| | |||| || |||||||||| ||||| ||||||| |||||| |||| Sbjct: 43274 taccccgtcgtccccggccacgagatcgtcggcgtcgtcaccggcgtcggcgccggcgtg 43333 Query: 297 accaagttcaaggccggcgac 317 ||||||||||||||||||||| Sbjct: 43334 accaagttcaaggccggcgac 43354 Score = 65.9 bits (33), Expect = 9e-08 Identities = 114/141 (80%) Strand = Plus / Minus Query: 177 tactgcgggatctgccactctgacctgcacagcatcaagaacgactggaagaacgctaag 236 |||||||| ||||||||| | ||||||||| | |||||||||| ||| ||||| | | Sbjct: 35853 tactgcggcatctgccacaccgacctgcacgtcgtcaagaacgattggggcaacgccatg 35794 Query: 237 taccccatgatccctgggcacgagatcgccggcgaggtcaccgaggtcggcaagaacgtg 296 |||||| | |||| || |||||||||| ||||| ||||||| |||||| |||| Sbjct: 35793 taccccgtcgtccccggccacgagatcgtcggcgtcgtcaccggcgtcggcgccggcgtg 35734 Query: 297 accaagttcaaggccggcgac 317 ||||||||||||||||||||| Sbjct: 35733 accaagttcaaggccggcgac 35713 Score = 58.0 bits (29), Expect = 2e-05 Identities = 113/141 (80%) Strand = Plus / Minus Query: 177 tactgcgggatctgccactctgacctgcacagcatcaagaacgactggaagaacgctaag 236 |||||||| ||||| ||| | |||||||||| |||||||||||| ||| ||||| | | Sbjct: 31975 tactgcggcatctgtcacaccgacctgcacaccatcaagaacgagtggggcaacgccatg 31916 Query: 237 taccccatgatccctgggcacgagatcgccggcgaggtcaccgaggtcggcaagaacgtg 296 |||||| | |||| || |||||||||| ||||| ||| ||| |||||| |||| Sbjct: 31915 taccccgtcgtccccggccacgagatcgtcggcgtcgtcgccggcgtcggcgccggcgtg 31856 Query: 297 accaagttcaaggccggcgac 317 |||| |||||||||||||||| Sbjct: 31855 accaggttcaaggccggcgac 31835
>dbj|AK072000.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013094F14, full insert sequence Length = 2015 Score = 73.8 bits (37), Expect = 4e-10 Identities = 115/141 (81%) Strand = Plus / Minus Query: 177 tactgcgggatctgccactctgacctgcacagcatcaagaacgactggaagaacgctaag 236 |||||||| ||||||||| |||||||||||| | ||||||| || ||| ||||| | | Sbjct: 1067 tactgcggcatctgccacactgacctgcacatcgtcaagaatgattggggcaacgccatg 1008 Query: 237 taccccatgatccctgggcacgagatcgccggcgaggtcaccgaggtcggcaagaacgtg 296 |||||| | |||| || |||||||||| ||||| ||||||| |||||| |||| Sbjct: 1007 taccccgtcgtccccggccacgagatcgtcggcgtcgtcaccggcgtcggcgccggcgtg 948 Query: 297 accaagttcaaggccggcgac 317 ||||||||||||||||||||| Sbjct: 947 accaagttcaaggccggcgac 927
>emb|AJ291708.1|MSM291708 Mycobacterium smegmatis adhC gene for alcohol dehydrogenase, class C Length = 1900 Score = 69.9 bits (35), Expect = 6e-09 Identities = 80/95 (84%) Strand = Plus / Plus Query: 237 taccccatgatccctgggcacgagatcgccggcgaggtcaccgaggtcggcaagaacgtg 296 |||||| || |||| || |||||||||||||||| |||||||||||| ||| | | || Sbjct: 639 taccccgtggtccccggtcacgagatcgccggcgtggtcaccgaggtgggctcggaggtc 698 Query: 297 accaagttcaaggccggcgaccgtgtcggtgtcgg 331 ||||||| ||||| ||||||||| ||||| ||||| Sbjct: 699 accaagtacaaggtcggcgaccgcgtcggcgtcgg 733
>gb|AF472591.1| Lolium perenne cinnamyl alcohol dehydrogenase (CAD1) mRNA, complete cds Length = 1325 Score = 69.9 bits (35), Expect = 6e-09 Identities = 65/75 (86%) Strand = Plus / Plus Query: 150 gacgacgatgtcatgataaagattctgtactgcgggatctgccactctgacctgcacagc 209 ||||||||||| | ||| ||| | || | |||||||||||||||| ||||||| |||| | Sbjct: 112 gacgacgatgtgacgatcaaggtgctcttctgcgggatctgccacactgacctccacatc 171 Query: 210 atcaagaacgactgg 224 ||||||||||||||| Sbjct: 172 atcaagaacgactgg 186
>dbj|AK108849.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-152-A05, full insert sequence Length = 1084 Score = 65.9 bits (33), Expect = 9e-08 Identities = 114/141 (80%) Strand = Plus / Minus Query: 177 tactgcgggatctgccactctgacctgcacagcatcaagaacgactggaagaacgctaag 236 |||||||| ||||||||| | ||||||||| | |||||||||| ||| ||||| | | Sbjct: 965 tactgcggcatctgccacaccgacctgcacgtcgtcaagaacgattggggcaacgccatg 906 Query: 237 taccccatgatccctgggcacgagatcgccggcgaggtcaccgaggtcggcaagaacgtg 296 |||||| | |||| || |||||||||| ||||| ||||||| |||||| |||| Sbjct: 905 taccccgtcgtccccggccacgagatcgtcggcgtcgtcaccggcgtcggcgccggcgtg 846 Query: 297 accaagttcaaggccggcgac 317 ||||||||||||||||||||| Sbjct: 845 accaagttcaaggccggcgac 825
>gb|AY850131.1| Populus tremula x Populus tremuloides sinapyl alcohol dehydrogenase-like protein (SAD1) mRNA, complete cds Length = 1089 Score = 61.9 bits (31), Expect = 1e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 174 ctgtactgcgggatctgccactctgacctgcacagcatcaagaacgactgg 224 |||||||||||||| ||||| |||||||| ||||| |||||||| |||||| Sbjct: 133 ctgtactgcgggatatgccattctgaccttcacagtatcaagaatgactgg 183
>dbj|AK059858.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-207-B03, full insert sequence Length = 1407 Score = 58.0 bits (29), Expect = 2e-05 Identities = 113/141 (80%) Strand = Plus / Plus Query: 177 tactgcgggatctgccactctgacctgcacagcatcaagaacgactggaagaacgctaag 236 |||||||| ||||| ||| | |||||||||| |||||||||||| ||| ||||| | | Sbjct: 236 tactgcggcatctgtcacaccgacctgcacaccatcaagaacgagtggggcaacgccatg 295 Query: 237 taccccatgatccctgggcacgagatcgccggcgaggtcaccgaggtcggcaagaacgtg 296 |||||| | |||| || |||||||||| ||||| ||| ||| |||||| |||| Sbjct: 296 taccccgtcgtccccggccacgagatcgtcggcgtcgtcgccggcgtcggcgccggcgtg 355 Query: 297 accaagttcaaggccggcgac 317 |||| |||||||||||||||| Sbjct: 356 accaggttcaaggccggcgac 376
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 58.0 bits (29), Expect = 2e-05 Identities = 80/97 (82%) Strand = Plus / Plus Query: 255 cacgagatcgccggcgaggtcaccgaggtcggcaagaacgtgaccaagttcaaggccggc 314 |||||||||||||||| ||||||||||| ||| | | || ||||||| ||||| ||| Sbjct: 3441716 cacgagatcgccggcgtcgtcaccgaggtgggcgcggaggtcaccaagtacaaggtgggc 3441775 Query: 315 gaccgtgtcggtgtcgggtgcatggtgaactcgtgcc 351 |||| ||||| || || |||||||||||||| |||| Sbjct: 3441776 gaccacgtcggcgtgggctgcatggtgaactcctgcc 3441812 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 256 acgagatcgccggcgaggtca 276 ||||||||||||||||||||| Sbjct: 284056 acgagatcgccggcgaggtca 284036 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 255 cacgagatcgccggcgaggt 274 |||||||||||||||||||| Sbjct: 3988683 cacgagatcgccggcgaggt 3988702
>gb|AF273256.1|AF273256 Populus tremuloides sinapyl alcohol dehydrogenase mRNA, complete cds Length = 1425 Score = 54.0 bits (27), Expect = 4e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 174 ctgtactgcgggatctgccactctgacctgcacagcatcaagaacgactgg 224 |||||||||||| | ||||| |||||||| ||||| |||||||| |||||| Sbjct: 139 ctgtactgcggggtatgccattctgaccttcacagtatcaagaatgactgg 189
>ref|XM_474988.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1083 Score = 52.0 bits (26), Expect = 0.001 Identities = 128/162 (79%) Strand = Plus / Plus Query: 176 gtactgcgggatctgccactctgacctgcacagcatcaagaacgactggaagaacgctaa 235 |||||||||||| |||||| | ||||||||| |||| | ||||||||| || | | | Sbjct: 129 gtactgcgggatgtgccacacggacctgcacttcatccacaacgactgggggatcaccat 188 Query: 236 gtaccccatgatccctgggcacgagatcgccggcgaggtcaccgaggtcggcaagaacgt 295 |||||| || | || |||||||||||| |||||| ||| ||| |||| |||| ||||| Sbjct: 189 gtacccggtggtgccggggcacgagatcaccggcgtggtgaccaaggtgggcaccaacgt 248 Query: 296 gaccaagttcaaggccggcgaccgtgtcggtgtcgggtgcat 337 | || |||||||| |||||||| || || || |||||||| Sbjct: 249 ggccgggttcaaggtgggcgaccgcgtgggcgtggggtgcat 290
>dbj|AK099270.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023021L06, full insert sequence Length = 1355 Score = 52.0 bits (26), Expect = 0.001 Identities = 128/162 (79%) Strand = Plus / Plus Query: 176 gtactgcgggatctgccactctgacctgcacagcatcaagaacgactggaagaacgctaa 235 |||||||||||| |||||| | ||||||||| |||| | ||||||||| || | | | Sbjct: 225 gtactgcgggatgtgccacacggacctgcacttcatccacaacgactgggggatcaccat 284 Query: 236 gtaccccatgatccctgggcacgagatcgccggcgaggtcaccgaggtcggcaagaacgt 295 |||||| || | || |||||||||||| |||||| ||| ||| |||| |||| ||||| Sbjct: 285 gtacccggtggtgccggggcacgagatcaccggcgtggtgaccaaggtgggcaccaacgt 344 Query: 296 gaccaagttcaaggccggcgaccgtgtcggtgtcgggtgcat 337 | || |||||||| |||||||| || || || |||||||| Sbjct: 345 ggccgggttcaaggtgggcgaccgcgtgggcgtggggtgcat 386
>dbj|AK071484.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023091M10, full insert sequence Length = 1378 Score = 52.0 bits (26), Expect = 0.001 Identities = 128/162 (79%) Strand = Plus / Plus Query: 176 gtactgcgggatctgccactctgacctgcacagcatcaagaacgactggaagaacgctaa 235 |||||||||||| |||||| | ||||||||| |||| | ||||||||| || | | | Sbjct: 228 gtactgcgggatgtgccacacggacctgcacttcatccacaacgactgggggatcaccat 287 Query: 236 gtaccccatgatccctgggcacgagatcgccggcgaggtcaccgaggtcggcaagaacgt 295 |||||| || | || |||||||||||| |||||| ||| ||| |||| |||| ||||| Sbjct: 288 gtacccggtggtgccggggcacgagatcaccggcgtggtgaccaaggtgggcaccaacgt 347 Query: 296 gaccaagttcaaggccggcgaccgtgtcggtgtcgggtgcat 337 | || |||||||| |||||||| || || || |||||||| Sbjct: 348 ggccgggttcaaggtgggcgaccgcgtgggcgtggggtgcat 389
>emb|AL731598.2|OSJN00248 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0065B15, complete sequence Length = 150007 Score = 52.0 bits (26), Expect = 0.001 Identities = 128/162 (79%) Strand = Plus / Minus Query: 176 gtactgcgggatctgccactctgacctgcacagcatcaagaacgactggaagaacgctaa 235 |||||||||||| |||||| | ||||||||| |||| | ||||||||| || | | | Sbjct: 57439 gtactgcgggatgtgccacacggacctgcacttcatccacaacgactgggggatcaccat 57380 Query: 236 gtaccccatgatccctgggcacgagatcgccggcgaggtcaccgaggtcggcaagaacgt 295 |||||| || | || |||||||||||| |||||| ||| ||| |||| |||| ||||| Sbjct: 57379 gtacccggtggtgccggggcacgagatcaccggcgtggtgaccaaggtgggcaccaacgt 57320 Query: 296 gaccaagttcaaggccggcgaccgtgtcggtgtcgggtgcat 337 | || |||||||| |||||||| || || || |||||||| Sbjct: 57319 ggccgggttcaaggtgggcgaccgcgtgggcgtggggtgcat 57278
>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome Length = 4712337 Score = 50.1 bits (25), Expect = 0.006 Identities = 43/49 (87%) Strand = Plus / Plus Query: 303 ttcaaggccggcgaccgtgtcggtgtcgggtgcatggtgaactcgtgcc 351 ||||||||||||||||| ||||| || || ||||||||| | ||||||| Sbjct: 2686199 ttcaaggccggcgaccgcgtcggcgtaggctgcatggtggattcgtgcc 2686247
>gb|CP000133.1| Rhizobium etli CFN 42, complete genome Length = 4381608 Score = 46.1 bits (23), Expect = 0.086 Identities = 32/35 (91%) Strand = Plus / Plus Query: 297 accaagttcaaggccggcgaccgtgtcggtgtcgg 331 ||||||||||||| ||||||||| ||||| ||||| Sbjct: 2873368 accaagttcaaggtcggcgaccgcgtcggcgtcgg 2873402
>gb|AF188295.1|AF188295 Festuca arundinacea cinnamyl alcohol dehydrogenase 2b mRNA, complete cds Length = 1526 Score = 46.1 bits (23), Expect = 0.086 Identities = 29/31 (93%) Strand = Plus / Plus Query: 172 ttctgtactgcgggatctgccactctgacct 202 ||||||||||||| ||||||||| ||||||| Sbjct: 215 ttctgtactgcggcatctgccacactgacct 245
>gb|AF188294.1|AF188294 Festuca arundinacea cinnamyl alcohol dehydrogenase 2a mRNA, complete cds Length = 1322 Score = 46.1 bits (23), Expect = 0.086 Identities = 29/31 (93%) Strand = Plus / Plus Query: 172 ttctgtactgcgggatctgccactctgacct 202 ||||||||||||| ||||||||| ||||||| Sbjct: 215 ttctgtactgcggcatctgccacactgacct 245
>gb|AF188293.1|AF188293 Festuca arundinacea cinnamyl alcohol dehydrogenase 1b mRNA, complete cds Length = 1339 Score = 46.1 bits (23), Expect = 0.086 Identities = 29/31 (93%) Strand = Plus / Plus Query: 172 ttctgtactgcgggatctgccactctgacct 202 ||||||||||||| ||||||||| ||||||| Sbjct: 164 ttctgtactgcggcatctgccacactgacct 194
>gb|AF188292.1|AF188292 Festuca arundinacea cinnamyl alcohol dehydrogenase 1a mRNA, complete cds Length = 1501 Score = 46.1 bits (23), Expect = 0.086 Identities = 29/31 (93%) Strand = Plus / Plus Query: 172 ttctgtactgcgggatctgccactctgacct 202 ||||||||||||| ||||||||| ||||||| Sbjct: 164 ttctgtactgcggcatctgccacactgacct 194
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 46.1 bits (23), Expect = 0.086 Identities = 35/39 (89%) Strand = Plus / Plus Query: 309 gccggcgaccgtgtcggtgtcgggtgcatggtgaactcg 347 |||||||||| ||||| ||||||||||||||| ||||| Sbjct: 3609633 gccggcgacctcgtcggcgtcgggtgcatggtggactcg 3609671 Score = 46.1 bits (23), Expect = 0.086 Identities = 29/31 (93%) Strand = Plus / Plus Query: 177 tactgcgggatctgccactctgacctgcaca 207 |||||||| ||||||||||| |||||||||| Sbjct: 3609492 tactgcggcatctgccactcggacctgcaca 3609522
>gb|AF010290.1|AF010290 Lolium perenne cinnamyl alcohol dehydrogenase mRNA, complete cds Length = 1382 Score = 46.1 bits (23), Expect = 0.086 Identities = 29/31 (93%) Strand = Plus / Plus Query: 172 ttctgtactgcgggatctgccactctgacct 202 ||||||||||||| ||||||||| ||||||| Sbjct: 205 ttctgtactgcggcatctgccacactgacct 235
>ref|XM_463664.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1329 Score = 44.1 bits (22), Expect = 0.34 Identities = 22/22 (100%) Strand = Plus / Plus Query: 287 caagaacgtgaccaagttcaag 308 |||||||||||||||||||||| Sbjct: 432 caagaacgtgaccaagttcaag 453
>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome Length = 6438405 Score = 44.1 bits (22), Expect = 0.34 Identities = 25/26 (96%) Strand = Plus / Plus Query: 275 caccgaggtcggcaagaacgtgacca 300 |||||||||||||||| ||||||||| Sbjct: 475420 caccgaggtcggcaaggacgtgacca 475445 Score = 40.1 bits (20), Expect = 5.3 Identities = 32/36 (88%) Strand = Plus / Plus Query: 305 caaggccggcgaccgtgtcggtgtcgggtgcatggt 340 ||||| |||||||| ||||||||||| |||||||| Sbjct: 4662115 caaggtcggcgacctggtcggtgtcggctgcatggt 4662150
>emb|AJ231135.1|SOF231135 Saccharum officinarum mRNA for cinnamyl alcohol dehydrogenase Length = 1593 Score = 44.1 bits (22), Expect = 0.34 Identities = 25/26 (96%) Strand = Plus / Plus Query: 234 aagtaccccatgatccctgggcacga 259 |||||||||||| ||||||||||||| Sbjct: 367 aagtaccccatggtccctgggcacga 392
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 44.1 bits (22), Expect = 0.34 Identities = 22/22 (100%) Strand = Plus / Minus Query: 269 cgaggtcaccgaggtcggcaag 290 |||||||||||||||||||||| Sbjct: 3455546 cgaggtcaccgaggtcggcaag 3455525
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 44.1 bits (22), Expect = 0.34 Identities = 70/86 (81%) Strand = Plus / Minus Query: 255 cacgagatcgccggcgaggtcaccgaggtcggcaagaacgtgaccaagttcaaggccggc 314 ||||||||||||||| ||| ||||||||||| ||| ||||||||| ||| |||| Sbjct: 4126088 cacgagatcgccggcatcgtcgccgaggtcggctccggcgtcaccaagttccaggtcggc 4126029 Query: 315 gaccgtgtcggtgtcgggtgcatggt 340 ||||| || || ||||| |||||||| Sbjct: 4126028 gaccgggtgggcgtcggctgcatggt 4126003 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 266 cggcgaggtcaccgaggtcg 285 |||||||||||||||||||| Sbjct: 6536792 cggcgaggtcaccgaggtcg 6536773
>emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid complete sequence Length = 2094509 Score = 44.1 bits (22), Expect = 0.34 Identities = 34/38 (89%) Strand = Plus / Minus Query: 303 ttcaaggccggcgaccgtgtcggtgtcgggtgcatggt 340 |||||||||||||||| |||||| || || |||||||| Sbjct: 1421766 ttcaaggccggcgaccctgtcggcgtgggctgcatggt 1421729 Score = 40.1 bits (20), Expect = 5.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 169 agattctgtactgcgggatctgccactc 196 |||| |||||||||||| |||||||||| Sbjct: 1421900 agatcctgtactgcggggtctgccactc 1421873
>gb|CP000112.1| Desulfovibrio desulfuricans G20, complete genome Length = 3730232 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 288 aagaacgtgaccaagttcaaggccg 312 ||||||||||||| ||||||||||| Sbjct: 1912108 aagaacgtgaccatgttcaaggccg 1912084
>ref|XM_550027.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1157 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 101 cgcctccggccgcctctccccgctc 125 |||||||| |||||||||||||||| Sbjct: 72 cgcctccgcccgcctctccccgctc 96
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 42.1 bits (21), Expect = 1.4 Identities = 30/33 (90%) Strand = Plus / Plus Query: 247 tccctgggcacgagatcgccggcgaggtcaccg 279 ||||||| |||||||||||||||| ||| |||| Sbjct: 3402200 tccctggccacgagatcgccggcgtggtgaccg 3402232
>ref|XM_324179.1| Neurospora crassa OR74A hypothetical protein (NCU04823.1) partial mRNA Length = 1095 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 280 aggtcggcaagaacgtgaccaagttcaag 308 |||||||||||||||||||| || ||||| Sbjct: 227 aggtcggcaagaacgtgaccgagatcaag 255
>ref|XM_955289.1| Neurospora crassa OR74A hypothetical protein (NCU04823.1) partial mRNA Length = 1095 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 280 aggtcggcaagaacgtgaccaagttcaag 308 |||||||||||||||||||| || ||||| Sbjct: 227 aggtcggcaagaacgtgaccgagatcaag 255
>emb|X63450.1|MBADH M.bovis adh gene for alcohol dehydrogenase Length = 1619 Score = 42.1 bits (21), Expect = 1.4 Identities = 30/33 (90%) Strand = Plus / Plus Query: 247 tccctgggcacgagatcgccggcgaggtcaccg 279 ||||||| |||||||||||||||| ||| |||| Sbjct: 405 tccctggccacgagatcgccggcgtggtgaccg 437
>gb|BT009165.1| Triticum aestivum clone wl1n.pk0095.d1:fis, full insert mRNA sequence Length = 1414 Score = 42.1 bits (21), Expect = 1.4 Identities = 87/109 (79%) Strand = Plus / Plus Query: 179 ctgcgggatctgccactctgacctgcacagcatcaagaacgactggaagaacgctaagta 238 ||||||| | |||||| ||||||| ||| |||||||||||| | ||||| ||||| Sbjct: 220 ctgcgggctttgccacactgacctccacgtcatcaagaacgagtttggcaacgccaagta 279 Query: 239 ccccatgatccctgggcacgagatcgccggcgaggtcaccgaggtcggc 287 |||| | | || ||||||||||||| ||||| |||||||| |||||| Sbjct: 280 ccccgtcgttcccgggcacgagatcgtcggcgtcgtcaccgacgtcggc 328
>emb|BX842581.1| Mycobacterium tuberculosis H37Rv complete genome; segment 10/13 Length = 348676 Score = 42.1 bits (21), Expect = 1.4 Identities = 30/33 (90%) Strand = Plus / Plus Query: 247 tccctgggcacgagatcgccggcgaggtcaccg 279 ||||||| |||||||||||||||| ||| |||| Sbjct: 287426 tccctggccacgagatcgccggcgtggtgaccg 287458
>emb|BX248344.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 11/14 Length = 318050 Score = 42.1 bits (21), Expect = 1.4 Identities = 30/33 (90%) Strand = Plus / Plus Query: 247 tccctgggcacgagatcgccggcgaggtcaccg 279 ||||||| |||||||||||||||| ||| |||| Sbjct: 238023 tccctggccacgagatcgccggcgtggtgaccg 238055
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 101 cgcctccggccgcctctccccgctc 125 |||||||| |||||||||||||||| Sbjct: 1816531 cgcctccgcccgcctctccccgctc 1816507
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 42.1 bits (21), Expect = 1.4 Identities = 33/37 (89%) Strand = Plus / Plus Query: 252 gggcacgagatcgccggcgaggtcaccgaggtcggca 288 ||||||||| || ||||| ||||||||||||||||| Sbjct: 3260722 gggcacgagttctccggcacggtcaccgaggtcggca 3260758
>dbj|AP003214.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0083M16 Length = 179428 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 101 cgcctccggccgcctctccccgctc 125 |||||||| |||||||||||||||| Sbjct: 57913 cgcctccgcccgcctctccccgctc 57889
>emb|AJ582913.1| Mus musculus mRNA for A-kinase anchor protein 9 (Akap9 gene) Length = 12009 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 205 acagcatcaagaacgactggaagaa 229 |||| |||||||||||||||||||| Sbjct: 4287 acagtatcaagaacgactggaagaa 4311
>dbj|AK068422.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013151G18, full insert sequence Length = 1157 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 101 cgcctccggccgcctctccccgctc 125 |||||||| |||||||||||||||| Sbjct: 72 cgcctccgcccgcctctccccgctc 96
>gb|AF466200.2| Sorghum bicolor putative protein kinase gene, partial cds; putative Cf-2, fertilization-independent endosperm proteins, hypothetical protein, putative non-LTR retroelement reverse transcriptase, OCL5 protein, tryptophan synthase beta-subunit, hypothetical proteins, putative AP endonuclease, putative RNA polymerase II complex component SRB7, putative beta-1,3-glucanase, hypothetical protein, TNP2-like protein, hypothetical protein, putative phosphate/phosphoenolpyruvate translocator, putative protein, hypothetical proteins, putative galactosyltransferase family, hypothetical protein, putative cytochrome P450 family, putative lipid transfer protein, putative photoreceptor-interacting protein, and hypothetical protein genes, complete cds; and hypothetical protein gene, partial cds Length = 202197 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 257 cgagatcgccggcgaggtcac 277 ||||||||||||||||||||| Sbjct: 146892 cgagatcgccggcgaggtcac 146912
>gb|AY106482.1| Zea mays PCO097882 mRNA sequence Length = 1500 Score = 42.1 bits (21), Expect = 1.4 Identities = 87/109 (79%) Strand = Plus / Plus Query: 179 ctgcgggatctgccactctgacctgcacagcatcaagaacgactggaagaacgctaagta 238 ||||||| | |||||| ||||||| ||| |||||||||||| | ||||| ||||| Sbjct: 333 ctgcgggctttgccacactgacctccacgtcatcaagaacgagtttggcaacgccaagta 392 Query: 239 ccccatgatccctgggcacgagatcgccggcgaggtcaccgaggtcggc 287 |||| | | || ||||||||||||| ||||| |||||||| |||||| Sbjct: 393 ccccgtcgttcccgggcacgagatcgtcggcgtcgtcaccgacgtcggc 441
>gb|AC064793.3| Mus musculus strain C57BL6/J chromosome 5 clone RP23-369O21, complete sequence Length = 196933 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 205 acagcatcaagaacgactggaagaa 229 |||| |||||||||||||||||||| Sbjct: 88856 acagtatcaagaacgactggaagaa 88832
>emb|AL939130.1|SCO939130 Streptomyces coelicolor A3(2) complete genome; segment 27/29 Length = 303450 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 267 ggcgaggtcaccgaggtcggc 287 ||||||||||||||||||||| Sbjct: 181353 ggcgaggtcaccgaggtcggc 181333
>ref|NM_194462.1| Mus musculus A kinase (PRKA) anchor protein (yotiao) 9 (Akap9), mRNA Length = 12009 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 205 acagcatcaagaacgactggaagaa 229 |||| |||||||||||||||||||| Sbjct: 4287 acagtatcaagaacgactggaagaa 4311
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 354 tcctgcgagagctgcgacaag 374 ||||||||||||||||||||| Sbjct: 2915357 tcctgcgagagctgcgacaag 2915377
>ref|XM_479937.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1671 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 258 gagatcgccggcgaggtcac 277 |||||||||||||||||||| Sbjct: 1324 gagatcgccggcgaggtcac 1343
>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence Length = 3587082 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 85 gcctggcggcgctcgacgcc 104 |||||||||||||||||||| Sbjct: 2848221 gcctggcggcgctcgacgcc 2848240
>ref|XM_593721.2| PREDICTED: Bos taurus similar to Nucleoside diphosphate kinase 3 (NDK 3) (NDP kinase 3) (Nucleoside diphosphate kinase C) (NDPKC) (nm23-H3) (DR-nm23), transcript variant 1 (LOC515663), mRNA Length = 820 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 278 cgaggtcggcaagaacgtga 297 |||||||||||||||||||| Sbjct: 403 cgaggtcggcaagaacgtga 422
>ref|XM_415701.1| PREDICTED: Gallus gallus similar to dynein intermediate chain (LOC417453), mRNA Length = 4219 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 52 agcagagccagcagcacacg 71 |||||||||||||||||||| Sbjct: 3426 agcagagccagcagcacacg 3445
>gb|AE017180.1| Geobacter sulfurreducens PCA, complete genome Length = 3814139 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 261 atcgccggcgaggtcaccgaggtc 284 |||||||||| ||||||||||||| Sbjct: 2846313 atcgccggcgtggtcaccgaggtc 2846290
>ref|XM_580560.2| PREDICTED: Bos taurus similar to zinc finger protein 93 homolog (LOC504436), mRNA Length = 3094 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 356 ctgcgagagctgcgacaagggctt 379 |||||||||||||| ||||||||| Sbjct: 1122 ctgcgagagctgcggcaagggctt 1145
>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome Length = 6093698 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 311 cggcgaccgtgtcggtgtcg 330 |||||||||||||||||||| Sbjct: 232669 cggcgaccgtgtcggtgtcg 232650
>gb|CP000058.1| Pseudomonas syringae pv. phaseolicola 1448A, complete genome Length = 5928787 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 311 cggcgaccgtgtcggtgtcg 330 |||||||||||||||||||| Sbjct: 243971 cggcgaccgtgtcggtgtcg 243952
>gb|AC121801.2| Mus musculus BAC clone RP23-432P18 from 14, complete sequence Length = 194612 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 243 atgatccctgggcacgagat 262 |||||||||||||||||||| Sbjct: 16084 atgatccctgggcacgagat 16065
>gb|AC159983.8| Mus musculus BAC clone RP23-192C23 from chromosome 13, complete sequence Length = 193502 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 gagccagcagcacacgaaga 75 |||||||||||||||||||| Sbjct: 67443 gagccagcagcacacgaaga 67462
>gb|AY352047.1| Catharanthus roseus 10-hydroxygeraniol oxidoreductase mRNA, complete cds Length = 1324 Score = 40.1 bits (20), Expect = 5.3 Identities = 38/44 (86%) Strand = Plus / Plus Query: 177 tactgcgggatctgccactctgacctgcacagcatcaagaacga 220 |||||||||||||| ||||| || || |||| ||||||||||| Sbjct: 196 tactgcgggatctgtcactcggatcttcacatgatcaagaacga 239
>emb|BX572598.1| Rhodopseudomonas palustris CGA009 complete genome; segment 6/16 Length = 346879 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 289 agaacgtgaccaagttcaag 308 |||||||||||||||||||| Sbjct: 258837 agaacgtgaccaagttcaag 258856
>gb|AC091782.5| Genomic sequence for Mus musculus, clone RP23-103P23, complete sequence Length = 195574 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 gagccagcagcacacgaaga 75 |||||||||||||||||||| Sbjct: 67310 gagccagcagcacacgaaga 67329
>gb|AF145989.1| Larix gmelini clone 6 cinnamyl alcohol dehydrogenase (CAD) gene, partial cds Length = 1348 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 177 tactgcgggatctgccactctgac 200 |||||||| ||||||||||||||| Sbjct: 157 tactgcggaatctgccactctgac 180
>gb|AF145988.1| Larix gmelini clone 3 cinnamyl alcohol dehydrogenase (CAD) gene, partial cds Length = 1350 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 177 tactgcgggatctgccactctgac 200 |||||||| ||||||||||||||| Sbjct: 157 tactgcggaatctgccactctgac 180
>gb|AF145987.1| Larix gmelini clone 2 cinnamyl alcohol dehydrogenase (CAD) gene, partial cds Length = 1348 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 177 tactgcgggatctgccactctgac 200 |||||||| ||||||||||||||| Sbjct: 157 tactgcggaatctgccactctgac 180
>gb|AF146013.1| Metasequoia glyptostroboides clone 1 cinnamyl alcohol dehydrogenase (CAD) gene, partial cds Length = 1363 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 177 tactgcgggatctgccactctgac 200 |||||||| ||||||||||||||| Sbjct: 161 tactgcggaatctgccactctgac 184
>gb|AF146011.1| Abies holophylla clone 2 cinnamyl alcohol dehydrogenase (CAD) gene, partial cds Length = 1251 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 177 tactgcgggatctgccactctgac 200 |||||||| ||||||||||||||| Sbjct: 157 tactgcggaatctgccactctgac 180
>gb|AF146010.1| Abies beshanzuensis clone 7 cinnamyl alcohol dehydrogenase (CAD) gene, partial cds Length = 1298 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 177 tactgcgggatctgccactctgac 200 |||||||| ||||||||||||||| Sbjct: 157 tactgcggaatctgccactctgac 180
>gb|AF146009.1| Abies firma clone 1 cinnamyl alcohol dehydrogenase (CAD) gene, partial cds Length = 1298 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 177 tactgcgggatctgccactctgac 200 |||||||| ||||||||||||||| Sbjct: 157 tactgcggaatctgccactctgac 180
>gb|AF146008.1| Abies firma clone 2 cinnamyl alcohol dehydrogenase (CAD) gene, partial cds Length = 1360 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 177 tactgcgggatctgccactctgac 200 |||||||| ||||||||||||||| Sbjct: 161 tactgcggaatctgccactctgac 184
>gb|AF146007.1| Pseudolarix amabilis clone 2 cinnamyl alcohol dehydrogenase (CAD) gene, partial cds Length = 1286 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 177 tactgcgggatctgccactctgac 200 |||||||| ||||||||||||||| Sbjct: 156 tactgcggaatctgccactctgac 179
>gb|AF146006.1| Nothotsuga longibracteata clone 2 cinnamyl alcohol dehydrogenase (CAD) gene, partial cds Length = 1363 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 177 tactgcgggatctgccactctgac 200 |||||||| ||||||||||||||| Sbjct: 161 tactgcggaatctgccactctgac 184
>gb|AF146005.1| Nothotsuga longibracteata clone 1 cinnamyl alcohol dehydrogenase (CAD) gene, partial cds Length = 1398 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 177 tactgcgggatctgccactctgac 200 |||||||| ||||||||||||||| Sbjct: 154 tactgcggaatctgccactctgac 177
>gb|AF146004.1| Nothotsuga longibracteata clone 5 cinnamyl alcohol dehydrogenase (CAD) gene, partial cds Length = 1288 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 177 tactgcgggatctgccactctgac 200 |||||||| ||||||||||||||| Sbjct: 121 tactgcggaatctgccactctgac 144
>gb|AF146003.1| Nothotsuga longibracteata clone 3 cinnamyl alcohol dehydrogenase (CAD) gene, partial cds Length = 1307 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 177 tactgcgggatctgccactctgac 200 |||||||| ||||||||||||||| Sbjct: 143 tactgcggaatctgccactctgac 166
>gb|AF146002.1| Tsuga mertensiana clone 6 cinnamyl alcohol dehydrogenase (CAD) gene, partial cds Length = 1318 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 177 tactgcgggatctgccactctgac 200 |||||||| ||||||||||||||| Sbjct: 125 tactgcggaatctgccactctgac 148
>gb|AF146001.1| Tsuga mertensiana clone 5 cinnamyl alcohol dehydrogenase (CAD) gene, partial cds Length = 1322 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 177 tactgcgggatctgccactctgac 200 |||||||| ||||||||||||||| Sbjct: 132 tactgcggaatctgccactctgac 155
>gb|AF146000.1| Tsuga mertensiana clone 2 cinnamyl alcohol dehydrogenase (CAD) gene, partial cds Length = 1362 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 177 tactgcgggatctgccactctgac 200 |||||||| ||||||||||||||| Sbjct: 161 tactgcggaatctgccactctgac 184
>gb|AF145999.1| Tsuga mertensiana clone 1 cinnamyl alcohol dehydrogenase (CAD) gene, partial cds Length = 1364 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 177 tactgcgggatctgccactctgac 200 |||||||| ||||||||||||||| Sbjct: 161 tactgcggaatctgccactctgac 184
>gb|AF145998.1| Tsuga canadensis clone 8 cinnamyl alcohol dehydrogenase (CAD) gene, partial cds Length = 1326 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 177 tactgcgggatctgccactctgac 200 |||||||| ||||||||||||||| Sbjct: 139 tactgcggaatctgccactctgac 162
>gb|AF145997.1| Tsuga canadensis clone 3 cinnamyl alcohol dehydrogenase (CAD) gene, partial cds Length = 1306 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 177 tactgcgggatctgccactctgac 200 |||||||| ||||||||||||||| Sbjct: 143 tactgcggaatctgccactctgac 166
>gb|AF145996.1| Tsuga canadensis clone 4 cinnamyl alcohol dehydrogenase (CAD) gene, partial cds Length = 1339 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 177 tactgcgggatctgccactctgac 200 |||||||| ||||||||||||||| Sbjct: 145 tactgcggaatctgccactctgac 168
>gb|AF145995.1| Tsuga canadensis clone 2 cinnamyl alcohol dehydrogenase (CAD) gene, partial cds Length = 1339 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 177 tactgcgggatctgccactctgac 200 |||||||| ||||||||||||||| Sbjct: 145 tactgcggaatctgccactctgac 168
>gb|AF145986.1| Pseudotsuga menziesii clone 2 cinnamyl alcohol dehydrogenase (CAD) gene, partial cds Length = 1336 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 177 tactgcgggatctgccactctgac 200 |||||||| ||||||||||||||| Sbjct: 157 tactgcggaatctgccactctgac 180
>gb|AF145985.1| Pseudotsuga menziesii clone 1 cinnamyl alcohol dehydrogenase (CAD) gene, partial cds Length = 1336 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 177 tactgcgggatctgccactctgac 200 |||||||| ||||||||||||||| Sbjct: 157 tactgcggaatctgccactctgac 180
>gb|AF145984.1| Cedrus atlantica clone 1 cinnamyl alcohol dehydrogenase (CAD) gene, partial cds Length = 1392 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 177 tactgcgggatctgccactctgac 200 |||||||| ||||||||||||||| Sbjct: 294 tactgcggaatctgccactctgac 317
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 259 agatcgccggcgaggtcacc 278 |||||||||||||||||||| Sbjct: 494106 agatcgccggcgaggtcacc 494087
>gb|DQ358689.1| Phleum pratense cinnamyl alcohol dehydrogenase gene, partial cds Length = 1075 Score = 40.1 bits (20), Expect = 5.3 Identities = 29/32 (90%) Strand = Plus / Plus Query: 189 tgccactctgacctgcacagcatcaagaacga 220 |||||| ||||||| |||| |||||||||||| Sbjct: 1 tgccacactgacctccacatcatcaagaacga 32
>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome Length = 3304561 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 254 gcacgagatcgccggcgagg 273 |||||||||||||||||||| Sbjct: 420039 gcacgagatcgccggcgagg 420020
>dbj|AP005250.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBb0009H02 Length = 155388 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 258 gagatcgccggcgaggtcac 277 |||||||||||||||||||| Sbjct: 34075 gagatcgccggcgaggtcac 34056
>gb|AF096929.1|AF096929 Rhodococcus erythropolis hypothetical repressor protein KstR (kstR) and 3-ketosteroid dehydrogenase (kstD1) genes, complete cds Length = 2398 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 264 gccggcgaggtcaccgaggtcggc 287 ||||||||||||||||| |||||| Sbjct: 1260 gccggcgaggtcaccgatgtcggc 1237
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 40.1 bits (20), Expect = 5.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 86 cctggcggcgctcgacgcctccggccgc 113 ||||||||||||||||| |||| ||||| Sbjct: 3373558 cctggcggcgctcgacggctcctgccgc 3373531
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome Length = 6181863 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 238 accccatgatccctgggcac 257 |||||||||||||||||||| Sbjct: 2281804 accccatgatccctgggcac 2281785
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence Length = 2914771 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 253 ggcacgagatcgccggcgag 272 |||||||||||||||||||| Sbjct: 2653080 ggcacgagatcgccggcgag 2653061
>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome Length = 2595221 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 313 gcgaccgtgtcggtgtcggg 332 |||||||||||||||||||| Sbjct: 1516938 gcgaccgtgtcggtgtcggg 1516957
>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome Length = 3551823 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 33 cccacggcgacggagccgga 52 |||||||||||||||||||| Sbjct: 2119612 cccacggcgacggagccgga 2119593 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,443,796 Number of Sequences: 3902068 Number of extensions: 2443796 Number of successful extensions: 53988 Number of sequences better than 10.0: 114 Number of HSP's better than 10.0 without gapping: 116 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 51450 Number of HSP's gapped (non-prelim): 2533 length of query: 399 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 377 effective length of database: 17,147,199,772 effective search space: 6464494314044 effective search space used: 6464494314044 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
