ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal25k06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|M55449.1|BLYRCABG Hordeum vulgare subsp. vulgare ribulose 1,5... 803 0.0
2gb|M55448.1|BLYRCAB Hordeum vulgare rubisco activase (RcaB) mRNA... 803 0.0
3gb|AF251264.1|AF251264 Triticum aestivum ribulose bisphosphate c... 563 e-157
4gb|AF305876.2| Zea mays ribulose 1,5-bisphosphate carboxylase/ox... 172 7e-40
5gb|AF084478.3| Zea mays ribulose-1,5-bisphosphate carboxylase/ox... 172 7e-40
6gb|AY110044.1| Zea mays CL1146_1 mRNA sequence 157 4e-35
7gb|AC137064.4| Oryza sativa (japonica cultivar-group) chromosome... 100 8e-18
8gb|AC133008.3| Oryza sativa (japonica cultivar-group) chromosome... 100 8e-18
9dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 100 8e-18
10gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 100 8e-18
11gb|AF338238.1|AF338238 Zantedeschia aethiopica rubisco activase ... 96 1e-16
12gb|AF338237.1|AF338237 Zantedeschia aethiopica rubisco activase ... 96 1e-16
13dbj|AB110180.1| Oryza sativa (japonica cultivar-group) mRNA for ... 80 8e-12
14gb|AF338240.1|AF338240 Zantedeschia aethiopica rubisco activase ... 80 8e-12
15gb|AF338239.1|AF338239 Zantedeschia aethiopica rubisco activase ... 80 8e-12
16dbj|AK119513.1| Oryza sativa (japonica cultivar-group) cDNA clon... 80 8e-12
17dbj|AK104332.1| Oryza sativa (japonica cultivar-group) cDNA clon... 80 8e-12
18dbj|AK064986.1| Oryza sativa (japonica cultivar-group) cDNA clon... 80 8e-12
19dbj|AK060847.1| Oryza sativa (japonica cultivar-group) cDNA clon... 80 8e-12
20dbj|AK060841.1| Oryza sativa (japonica cultivar-group) cDNA clon... 80 8e-12
21dbj|AB034748.1| Oryza sativa OsrcaA2 mRNA for RuBisCO activase s... 80 8e-12
22dbj|AB034698.1| Oryza sativa OsrcaA1 mRNA for RuBisCO activase l... 80 8e-12
23gb|AY312573.1| Deschampsia antarctica Rubisco activase alpha for... 74 5e-10
24gb|U74321.1|OSU74321 Oryza sativa ribulose-1,5-bisphosphate carb... 74 5e-10
25gb|AF349638.1|AF349638 Oryza sativa ribulose-1,5-bisphosphate ca... 74 5e-10
26gb|AY312574.1| Deschampsia antarctica Rubisco activase beta form... 70 7e-09
27gb|AY206372.1| Triticum aestivum ribulose-1,5-bisphosphate carbo... 68 3e-08
28gb|BC029790.1| Homo sapiens, clone IMAGE:5192697, mRNA 68 3e-08
29emb|AJ635203.1| Triticum durum ssp. durum partial mRNA for putat... 68 3e-08
30gb|M55447.1|BLYRCAA2 Hordeum vulgare rubisco activase (RcaA2) mR... 68 3e-08
31gb|M55446.1|BLYRCAA1 Hordeum vulgare rubisco activase (RcaA1) mR... 68 3e-08
32gb|AY461703.1| Chlamydomonas reinhardtii rubisco activase (Rca) ... 54 4e-04
33gb|M62962.1|CRERBCOA C.reinhardtii ribulose 1,5-bisphosphate car... 54 4e-04
34emb|Y10657.1|CLRCAGENE C.littorale rca gene 48 0.027
35gb|AC079326.8| Homo sapiens chromosome 11, clone RP11-233I10, co... 42 1.7
36gb|AC091097.8| Homo sapiens chromosome 11, clone RP11-65C9, comp... 42 1.7
37ref|NM_124725.2| Arabidopsis thaliana GLT1 AT5G53460 (GLT1) mRNA... 40 6.5
38gb|AC155204.4| Colobus guereza clone CH272-163G5, complete sequence 40 6.5
39gb|AC091381.3| Papio anubis clone RP41-468N20, complete sequence 40 6.5
40gb|AY312575.1| Larrea tridentata Rubisco activase alpha form pre... 40 6.5
41gb|AC124814.10| Mus musculus chromosome 1, clone RP24-119P5, com... 40 6.5
42gb|AC093889.2| Homo sapiens BAC clone RP11-671G14 from 7, comple... 40 6.5
43gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, compl... 40 6.5
44emb|CR933822.8| Zebrafish DNA sequence from clone DKEY-30F7 in l... 40 6.5
45emb|AL589679.14| Mouse DNA sequence from clone RP23-189A16 on ch... 40 6.5
46gb|DQ430613.1| Sorghum propinquum locus S10003 genomic sequence 40 6.5
47gb|DQ430604.1| Sorghum bicolor voucher NSL56174 locus S10003 gen... 40 6.5
48gb|DP000005.1| Macaca mulatta target 1 genomic scaffold 40 6.5
49dbj|AB169855.1| Macaca fascicularis brain cDNA, clone: QccE-1378... 40 6.5
50gb|AC024259.17| Homo sapiens chromosome 7 clone RP11-105B19, com... 40 6.5
51gb|DP000029.1| Cercopithecus aethiops target 1 genomic scaffold 40 6.5
52gb|AC123966.4| Macaca mulatta clone CH250-72H9, complete sequence 40 6.5
53gb|AC092162.3| Homo sapiens BAC clone RP11-632P5 from 2, complet... 40 6.5
54gb|AC154224.1| Mus musculus BAC clone RP24-141J15 from chromosom... 40 6.5
55gb|AC098590.3| Homo sapiens BAC clone RP11-324J13 from 4, comple... 40 6.5
56gb|AC078941.6| Homo sapiens BAC clone RP11-180B10 from 2, comple... 40 6.5
57dbj|AB020754.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 40 6.5
58emb|CR956397.19| Pig DNA sequence from clone CH242-259E5 on chro... 40 6.5
59gb|AC154184.1| Mus musculus BAC clone RP24-67K24 from 13, comple... 40 6.5
60gb|AC138437.3| Cercopithecus aethiops clone CH252-390I5, complet... 40 6.5
61emb|AL805929.7| Mouse DNA sequence from clone RP23-252O5 on chro... 40 6.5 
>gb|M55449.1|BLYRCABG Hordeum vulgare subsp. vulgare ribulose 1,5-bisphosphate carboxylase
            activase (RcaB) gene, complete cds; and ribulose
            1,5-bisphosphate carboxylase activase  (RcaA) gene,
            alternatively spliced, complete cds
          Length = 8766

 Score =  803 bits (405), Expect = 0.0
 Identities = 455/464 (98%), Gaps = 6/464 (1%)
 Strand = Plus / Plus

                                                                        
Query: 1    ttcttcggcgcgctgcgggcacgggtgtacgacgacgaggtgcgcaagtgggtcggcgag 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3756 ttcttcggcgcgctgcgggcacgggtgtacgacgacgaggtgcgcaagtgggtcggcgag 3815

                                                                        
Query: 61   natcggcgtggagaacatctccaagcgcctcgtcaactccaggggaggggccgcccacgt 120
             ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 3816 -atcggcgtggagaacatctccaagcgcctcgtcaactccaggg-aggggccgcccacgt 3873

                                                                        
Query: 121  tcgaccagcccaaggatgaccatagagaagctcatgggagtacggccacatgctggtcca 180
            |||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 3874 tcgaccagcccaag-atgaccatagagaagctcatgg-agtacggccacatgctggtcca 3931

                                                                        
Query: 181  gggagcaggagaacgtcaagcgtgtgcagctcgccgacaagtacctcagcgaggcggcgc 240
            || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3932 gg-agcaggagaacgtcaagcgtgtgcagctcgccgacaagtacctcagcgaggcggcgc 3990

                                                                        
Query: 241  tcggccaagccaacgacgacgccatgaagaccggtgccttctacggcaagtagaaggtcc 300
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3991 tcggccaagccaacgacgacgccatgaagaccggtgccttctacggcaagtagaaggtcc 4050

                                                                        
Query: 301  tactctacttaagatgcatgcatgcactatatatatgttggactattttggacccgaaat 360
            |||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4051 tactctacttaagatcgatgcatgcactatatatatgttggactattttggacccgaaat 4110

                                                                        
Query: 361  ccactcaaactttttgattcatcgccgcacaggtaacccaattgtaagtctcttnttgaa 420
            |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 4111 ccactcaaactttttgattcatcgccgcacaggtaacccaattgtaagtctcttcttgaa 4170

                                                        
Query: 421  agagaaaggaattgtatatgttcttaaatcgtcattttccgctt 464
            |||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 4171 agag-aaggaattgtatatgttcttaaatcgtcattttccgctt 4213



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 49/54 (90%)
 Strand = Plus / Plus

                                                                  
Query: 4    ttcggcgcgctgcgggcacgggtgtacgacgacgaggtgcgcaagtgggtcggc 57
            ||||| || ||||| || |||||||||||||| |||||||||||||||||||||
Sbjct: 7027 ttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgggtcggc 7080



 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 49/54 (90%), Gaps = 1/54 (1%)
 Strand = Plus / Plus

                                                                  
Query: 158  gagtacggccacatgctggtccagggagcaggagaacgtcaagcgtgtgcagct 211
            |||||||| |||||||| ||||||| ||||||| || |||||||||||||||||
Sbjct: 7177 gagtacgggcacatgctcgtccagg-agcaggacaatgtcaagcgtgtgcagct 7229
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>gb|M55448.1|BLYRCAB Hordeum vulgare rubisco activase (RcaB) mRNA, complete cds
          Length = 1656

 Score =  803 bits (405), Expect = 0.0
 Identities = 455/464 (98%), Gaps = 6/464 (1%)
 Strand = Plus / Plus

                                                                        
Query: 1    ttcttcggcgcgctgcgggcacgggtgtacgacgacgaggtgcgcaagtgggtcggcgag 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1187 ttcttcggcgcgctgcgggcacgggtgtacgacgacgaggtgcgcaagtgggtcggcgag 1246

                                                                        
Query: 61   natcggcgtggagaacatctccaagcgcctcgtcaactccaggggaggggccgcccacgt 120
             ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 1247 -atcggcgtggagaacatctccaagcgcctcgtcaactccaggg-aggggccgcccacgt 1304

                                                                        
Query: 121  tcgaccagcccaaggatgaccatagagaagctcatgggagtacggccacatgctggtcca 180
            |||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 1305 tcgaccagcccaag-atgaccatagagaagctcatgg-agtacggccacatgctggtcca 1362

                                                                        
Query: 181  gggagcaggagaacgtcaagcgtgtgcagctcgccgacaagtacctcagcgaggcggcgc 240
            || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1363 gg-agcaggagaacgtcaagcgtgtgcagctcgccgacaagtacctcagcgaggcggcgc 1421

                                                                        
Query: 241  tcggccaagccaacgacgacgccatgaagaccggtgccttctacggcaagtagaaggtcc 300
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1422 tcggccaagccaacgacgacgccatgaagaccggtgccttctacggcaagtagaaggtcc 1481

                                                                        
Query: 301  tactctacttaagatgcatgcatgcactatatatatgttggactattttggacccgaaat 360
            |||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1482 tactctacttaagatcgatgcatgcactatatatatgttggactattttggacccgaaat 1541

                                                                        
Query: 361  ccactcaaactttttgattcatcgccgcacaggtaacccaattgtaagtctcttnttgaa 420
            |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 1542 ccactcaaactttttgattcatcgccgcacaggtaacccaattgtaagtctcttcttgaa 1601

                                                        
Query: 421  agagaaaggaattgtatatgttcttaaatcgtcattttccgctt 464
            |||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 1602 agag-aaggaattgtatatgttcttaaatcgtcattttccgctt 1644
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>gb|AF251264.1|AF251264 Triticum aestivum ribulose bisphosphate carboxylase activase B (RcaB)
            mRNA, complete cds; nuclear gene for chloroplast product
          Length = 1525

 Score =  563 bits (284), Expect = e-157
 Identities = 414/450 (92%), Gaps = 17/450 (3%)
 Strand = Plus / Plus

                                                                        
Query: 1    ttcttcggcgcgctgcgggcacgggtgtacgacgacgaggtgcgcaagtgggtcggcgag 60
            |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 1037 ttcttcggcgcgctgcgggcgcgggtgtacgacgacgaggtgcgcaagtgggtcggcgag 1096

                                                                        
Query: 61   natcggcgtggagaacatctccaagcgcctcgtcaactccaggggaggggccgcccacgt 120
             |||||||| ||||||||||||||||| |||||||||||||||| |||||||||| ||||
Sbjct: 1097 -atcggcgtcgagaacatctccaagcggctcgtcaactccaggg-aggggccgccgacgt 1154

                                                                        
Query: 121  tcgaccagcccaaggatgaccatagagaagctcatgggagtacggccacatgctggtcca 180
            |||||||||||||| |||||||| ||||||||||||| ||||||||||||||||||||||
Sbjct: 1155 tcgaccagcccaag-atgaccatcgagaagctcatgg-agtacggccacatgctggtcca 1212

                                                                        
Query: 181  gggagcaggagaacgtcaagcgtgtgcagctcgccgacaagtacctcagcgaggcggcgc 240
            || ||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 1213 gg-agcaggagaacgtgaagcgcgtgcagctcgccgacaagtacctcagcgaggcggcgc 1271

                                                                        
Query: 241  tcggccaagccaacgacgacgccatgaagaccggtgccttctacggcaagtagaaggtcc 300
            ||||||||||||||||||||||||||  |||||| |||||||||||||||||||| ||||
Sbjct: 1272 tcggccaagccaacgacgacgccatggcgaccggcgccttctacggcaagtagaaagtcc 1331

                                                                        
Query: 301  tactctacttaaga--------tgcatgcatgcactatatatatgttggactattttgga 352
            ||   |||||||||        ||||||||||||||||||||||| |||| |||||||||
Sbjct: 1332 ta---tacttaagatgcatgcgtgcatgcatgcactatatatatgctggaatattttgga 1388

                                                                        
Query: 353  cccgaaatccactcaaactttttgattcatcgccgcacaggtaacccaattgtaagtctc 412
            | || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 1389 ctcg-aatccactcaaactttttgattcatcgccgcacaggtagcccaattgtaagtctc 1447

                                          
Query: 413  ttnttgaaagagaaaggaattgtatatgtt 442
            || |||||||||||   |||||||||||||
Sbjct: 1448 ttcttgaaagagaatccaattgtatatgtt 1477
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>gb|AF305876.2| Zea mays ribulose 1,5-bisphosphate carboxylase/oxygenase activase
           precursor, mRNA, partial cds
          Length = 1336

 Score =  172 bits (87), Expect = 7e-40
 Identities = 230/271 (84%), Gaps = 5/271 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   ttcttcggcgcgctgcgggcacgggtgtacgacgacgaggtgcgcaagtgggtcggcgag 60
           ||||||||||||||||| || ||||| |||||||||||||| ||   ||||||  |||||
Sbjct: 643 ttcttcggcgcgctgcgtgcccgggtctacgacgacgaggtccgacggtgggtgagcgag 702

                                                                       
Query: 61  natcggcgtggagaacatctccaagcgcctcgtcaactccaggggaggggccgcccacgt 120
            | |||||| ||||||||| ||| |   |||||||||||||  |||||| ||||||||||
Sbjct: 703 -accggcgtcgagaacatcgccaggaagctcgtcaactcca-aggagggcccgcccacgt 760

                                                                       
Query: 121 tcgaccagcccaaggatgaccatagagaagctcatgggagtacggccacatgctggtcca 180
           |||| |||||||| ||| || || ||||||||| | ||||||||| |||||||||||   
Sbjct: 761 tcgagcagcccaa-gataacgatcgagaagctc-ttggagtacggacacatgctggt-gg 817

                                                                       
Query: 181 gggagcaggagaacgtcaagcgtgtgcagctcgccgacaagtacctcagcgaggcggcgc 240
            |||||||||||||||||||||||||||||| || ||||||||||||| |||||| || |
Sbjct: 818 cggagcaggagaacgtcaagcgtgtgcagcttgctgacaagtacctcaacgaggctgctc 877

                                          
Query: 241 tcggccaagccaacgacgacgccatgaagac 271
           | ||  |||||||||| ||||||||||||||
Sbjct: 878 ttggtgaagccaacgaggacgccatgaagac 908
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>gb|AF084478.3| Zea mays ribulose-1,5-bisphosphate carboxylase/oxygenase activase
            precursor (rca1) mRNA, complete cds
          Length = 1424

 Score =  172 bits (87), Expect = 7e-40
 Identities = 230/271 (84%), Gaps = 5/271 (1%)
 Strand = Plus / Plus

                                                                        
Query: 1    ttcttcggcgcgctgcgggcacgggtgtacgacgacgaggtgcgcaagtgggtcggcgag 60
            ||||||||||||||||| || ||||| |||||||||||||| ||   ||||||  |||||
Sbjct: 1038 ttcttcggcgcgctgcgtgcccgggtctacgacgacgaggtccgacggtgggtgagcgag 1097

                                                                        
Query: 61   natcggcgtggagaacatctccaagcgcctcgtcaactccaggggaggggccgcccacgt 120
             | |||||| ||||||||| ||| |   |||||||||||||  |||||| ||||||||||
Sbjct: 1098 -accggcgtcgagaacatcgccaggaagctcgtcaactcca-aggagggcccgcccacgt 1155

                                                                        
Query: 121  tcgaccagcccaaggatgaccatagagaagctcatgggagtacggccacatgctggtcca 180
            |||| |||||||| ||| || || ||||||||| | ||||||||| |||||||||||   
Sbjct: 1156 tcgagcagcccaa-gataacgatcgagaagctc-ttggagtacggacacatgctggt-gg 1212

                                                                        
Query: 181  gggagcaggagaacgtcaagcgtgtgcagctcgccgacaagtacctcagcgaggcggcgc 240
             |||||||||||||||||||||||||||||| || ||||||||||||| |||||| || |
Sbjct: 1213 cggagcaggagaacgtcaagcgtgtgcagcttgctgacaagtacctcaacgaggctgctc 1272

                                           
Query: 241  tcggccaagccaacgacgacgccatgaagac 271
            | ||  |||||||||| ||||||||||||||
Sbjct: 1273 ttggtgaagccaacgaggacgccatgaagac 1303
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>gb|AY110044.1| Zea mays CL1146_1 mRNA sequence
          Length = 1750

 Score =  157 bits (79), Expect = 4e-35
 Identities = 228/271 (84%), Gaps = 5/271 (1%)
 Strand = Plus / Plus

                                                                        
Query: 1    ttcttcggcgcgctgcgggcacgggtgtacgacgacgaggtgcgcaagtgggtcggcgag 60
            ||||||||||||||||| ||   ||| |||||||||||||| ||   ||||||  |||||
Sbjct: 1038 ttcttcggcgcgctgcgtgccacggtctacgacgacgaggtccgacggtgggtgagcgag 1097

                                                                        
Query: 61   natcggcgtggagaacatctccaagcgcctcgtcaactccaggggaggggccgcccacgt 120
             | |||||| ||||||||| ||| |   ||||||||||||| || |||| ||||||||||
Sbjct: 1098 -accggcgtcgagaacatcgccaggaagctcgtcaactccaagg-agggcccgcccacgt 1155

                                                                        
Query: 121  tcgaccagcccaaggatgaccatagagaagctcatgggagtacggccacatgctggtcca 180
            |||| |||||||| ||| || || ||||||||| | ||||||||| |||||||||||   
Sbjct: 1156 tcgagcagcccaa-gataacgatcgagaagctc-ttggagtacggacacatgctggt-gg 1212

                                                                        
Query: 181  gggagcaggagaacgtcaagcgtgtgcagctcgccgacaagtacctcagcgaggcggcgc 240
             |||||||||||||||||||||||||||||| || ||||||||||||| |||||| || |
Sbjct: 1213 cggagcaggagaacgtcaagcgtgtgcagcttgctgacaagtacctcaacgaggctgctc 1272

                                           
Query: 241  tcggccaagccaacgacgacgccatgaagac 271
            | ||  |||||||||| ||||||||||||||
Sbjct: 1273 ttggtgaagccaacgaggacgccatgaagac 1303
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>gb|AC137064.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0003C04
              map S10003, complete sequence
          Length = 119238

 Score = 99.6 bits (50), Expect = 8e-18
 Identities = 72/78 (92%), Gaps = 1/78 (1%)
 Strand = Plus / Minus

                                                                          
Query: 167    cacatgctggtccagggagcaggagaacgtcaagcgtgtgcagctcgccgacaagtacct 226
              |||||||||||  ||||||||||||||||||||| | |||| ||||||||| ||||||||
Sbjct: 112262 cacatgctggtg-agggagcaggagaacgtcaagagggtgcggctcgccgataagtacct 112204

                                
Query: 227    cagcgaggcggcgctcgg 244
              ||||||||||||||||||
Sbjct: 112203 cagcgaggcggcgctcgg 112186



 Score = 79.8 bits (40), Expect = 8e-12
 Identities = 139/168 (82%), Gaps = 3/168 (1%)
 Strand = Plus / Minus

                                                                          
Query: 119    gttcgaccagcccaaggatgaccatagagaagctcatgggagtacggccacatgctggtc 178
              |||||| ||||||||| ||||| || || |||||||||| |||||||  ||||||| || 
Sbjct: 108475 gttcgagcagcccaag-atgacgatcgaaaagctcatgg-agtacggatacatgcttgtg 108418

                                                                          
Query: 179    cagggagcaggagaacgtcaagcgtgtgcagctcgccgacaagtacctcagcgaggcggc 238
               ||| |||||||||||||||||||||||||||| || ||  ||||| | |||||||| ||
Sbjct: 108417 aagg-agcaggagaacgtcaagcgtgtgcagctggctgagcagtacttgagcgaggctgc 108359

                                                              
Query: 239    gctcggccaagccaacgacgacgccatgaagaccggtgccttctacgg 286
               || ||  | || |||  ||||||||||||||| ||| ||||||||||
Sbjct: 108358 tcttggtgacgctaactccgacgccatgaagactggttccttctacgg 108311



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 68/79 (86%), Gaps = 1/79 (1%)
 Strand = Plus / Minus

                                                                          
Query: 1      ttcttcggcgcgctgcgggcacgggtgtacgacgacgaggtgcgcaagtgggtcggcgag 60
              |||||||| ||||||||||| |||||||||| ||||||||||||   |||||| ||||  
Sbjct: 112421 ttcttcggggcgctgcgggcgcgggtgtacggcgacgaggtgcggcggtgggt-ggcgga 112363

                                 
Query: 61     natcggcgtggagaacatc 79
               ||||| ||||||||||||
Sbjct: 112362 gatcggggtggagaacatc 112344



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 47/53 (88%)
 Strand = Plus / Minus

                                                                   
Query: 1      ttcttcggcgcgctgcgggcacgggtgtacgacgacgaggtgcgcaagtgggt 53
              ||||||||||| || || || || || ||||||||||||||||||||||||||
Sbjct: 108591 ttcttcggcgctcttcgtgcccgtgtttacgacgacgaggtgcgcaagtgggt 108539
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>gb|AC133008.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0026K20 map S10559, complete sequence
          Length = 115996

 Score = 99.6 bits (50), Expect = 8e-18
 Identities = 72/78 (92%), Gaps = 1/78 (1%)
 Strand = Plus / Minus

                                                                         
Query: 167   cacatgctggtccagggagcaggagaacgtcaagcgtgtgcagctcgccgacaagtacct 226
             |||||||||||  ||||||||||||||||||||| | |||| ||||||||| ||||||||
Sbjct: 34139 cacatgctggtg-agggagcaggagaacgtcaagagggtgcggctcgccgataagtacct 34081

                               
Query: 227   cagcgaggcggcgctcgg 244
             ||||||||||||||||||
Sbjct: 34080 cagcgaggcggcgctcgg 34063



 Score = 79.8 bits (40), Expect = 8e-12
 Identities = 139/168 (82%), Gaps = 3/168 (1%)
 Strand = Plus / Minus

                                                                         
Query: 119   gttcgaccagcccaaggatgaccatagagaagctcatgggagtacggccacatgctggtc 178
             |||||| ||||||||| ||||| || || |||||||||| |||||||  ||||||| || 
Sbjct: 30352 gttcgagcagcccaag-atgacgatcgaaaagctcatgg-agtacggatacatgcttgtg 30295

                                                                         
Query: 179   cagggagcaggagaacgtcaagcgtgtgcagctcgccgacaagtacctcagcgaggcggc 238
              ||| |||||||||||||||||||||||||||| || ||  ||||| | |||||||| ||
Sbjct: 30294 aagg-agcaggagaacgtcaagcgtgtgcagctggctgagcagtacttgagcgaggctgc 30236

                                                             
Query: 239   gctcggccaagccaacgacgacgccatgaagaccggtgccttctacgg 286
              || ||  | || |||  ||||||||||||||| ||| ||||||||||
Sbjct: 30235 tcttggtgacgctaactccgacgccatgaagactggttccttctacgg 30188



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 68/79 (86%), Gaps = 1/79 (1%)
 Strand = Plus / Minus

                                                                         
Query: 1     ttcttcggcgcgctgcgggcacgggtgtacgacgacgaggtgcgcaagtgggtcggcgag 60
             |||||||| ||||||||||| |||||||||| ||||||||||||   |||||| ||||  
Sbjct: 34298 ttcttcggggcgctgcgggcgcgggtgtacggcgacgaggtgcggcggtgggt-ggcgga 34240

                                
Query: 61    natcggcgtggagaacatc 79
              ||||| ||||||||||||
Sbjct: 34239 gatcggggtggagaacatc 34221



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 47/53 (88%)
 Strand = Plus / Minus

                                                                  
Query: 1     ttcttcggcgcgctgcgggcacgggtgtacgacgacgaggtgcgcaagtgggt 53
             ||||||||||| || || || || || ||||||||||||||||||||||||||
Sbjct: 30468 ttcttcggcgctcttcgtgcccgtgtttacgacgacgaggtgcgcaagtgggt 30416
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 99.6 bits (50), Expect = 8e-18
 Identities = 72/78 (92%), Gaps = 1/78 (1%)
 Strand = Plus / Minus

                                                                            
Query: 167      cacatgctggtccagggagcaggagaacgtcaagcgtgtgcagctcgccgacaagtacct 226
                |||||||||||  ||||||||||||||||||||| | |||| ||||||||| ||||||||
Sbjct: 28307401 cacatgctggtg-agggagcaggagaacgtcaagagggtgcggctcgccgataagtacct 28307343

                                  
Query: 227      cagcgaggcggcgctcgg 244
                ||||||||||||||||||
Sbjct: 28307342 cagcgaggcggcgctcgg 28307325



 Score = 79.8 bits (40), Expect = 8e-12
 Identities = 139/168 (82%), Gaps = 3/168 (1%)
 Strand = Plus / Minus

                                                                            
Query: 119      gttcgaccagcccaaggatgaccatagagaagctcatgggagtacggccacatgctggtc 178
                |||||| ||||||||| ||||| || || |||||||||| |||||||  ||||||| || 
Sbjct: 28303614 gttcgagcagcccaag-atgacgatcgaaaagctcatgg-agtacggatacatgcttgtg 28303557

                                                                            
Query: 179      cagggagcaggagaacgtcaagcgtgtgcagctcgccgacaagtacctcagcgaggcggc 238
                 ||| |||||||||||||||||||||||||||| || ||  ||||| | |||||||| ||
Sbjct: 28303556 aagg-agcaggagaacgtcaagcgtgtgcagctggctgagcagtacttgagcgaggctgc 28303498

                                                                
Query: 239      gctcggccaagccaacgacgacgccatgaagaccggtgccttctacgg 286
                 || ||  | || |||  ||||||||||||||| ||| ||||||||||
Sbjct: 28303497 tcttggtgacgctaactccgacgccatgaagactggttccttctacgg 28303450



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 68/79 (86%), Gaps = 1/79 (1%)
 Strand = Plus / Minus

                                                                            
Query: 1        ttcttcggcgcgctgcgggcacgggtgtacgacgacgaggtgcgcaagtgggtcggcgag 60
                |||||||| ||||||||||| |||||||||| ||||||||||||   |||||| ||||  
Sbjct: 28307560 ttcttcggggcgctgcgggcgcgggtgtacggcgacgaggtgcggcggtgggt-ggcgga 28307502

                                   
Query: 61       natcggcgtggagaacatc 79
                 ||||| ||||||||||||
Sbjct: 28307501 gatcggggtggagaacatc 28307483



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 47/53 (88%)
 Strand = Plus / Minus

                                                                     
Query: 1        ttcttcggcgcgctgcgggcacgggtgtacgacgacgaggtgcgcaagtgggt 53
                ||||||||||| || || || || || ||||||||||||||||||||||||||
Sbjct: 28303730 ttcttcggcgctcttcgtgcccgtgtttacgacgacgaggtgcgcaagtgggt 28303678
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 99.6 bits (50), Expect = 8e-18
 Identities = 72/78 (92%), Gaps = 1/78 (1%)
 Strand = Plus / Minus

                                                                            
Query: 167      cacatgctggtccagggagcaggagaacgtcaagcgtgtgcagctcgccgacaagtacct 226
                |||||||||||  ||||||||||||||||||||| | |||| ||||||||| ||||||||
Sbjct: 28289850 cacatgctggtg-agggagcaggagaacgtcaagagggtgcggctcgccgataagtacct 28289792

                                  
Query: 227      cagcgaggcggcgctcgg 244
                ||||||||||||||||||
Sbjct: 28289791 cagcgaggcggcgctcgg 28289774



 Score = 79.8 bits (40), Expect = 8e-12
 Identities = 139/168 (82%), Gaps = 3/168 (1%)
 Strand = Plus / Minus

                                                                            
Query: 119      gttcgaccagcccaaggatgaccatagagaagctcatgggagtacggccacatgctggtc 178
                |||||| ||||||||| ||||| || || |||||||||| |||||||  ||||||| || 
Sbjct: 28286063 gttcgagcagcccaag-atgacgatcgaaaagctcatgg-agtacggatacatgcttgtg 28286006

                                                                            
Query: 179      cagggagcaggagaacgtcaagcgtgtgcagctcgccgacaagtacctcagcgaggcggc 238
                 ||| |||||||||||||||||||||||||||| || ||  ||||| | |||||||| ||
Sbjct: 28286005 aagg-agcaggagaacgtcaagcgtgtgcagctggctgagcagtacttgagcgaggctgc 28285947

                                                                
Query: 239      gctcggccaagccaacgacgacgccatgaagaccggtgccttctacgg 286
                 || ||  | || |||  ||||||||||||||| ||| ||||||||||
Sbjct: 28285946 tcttggtgacgctaactccgacgccatgaagactggttccttctacgg 28285899



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 68/79 (86%), Gaps = 1/79 (1%)
 Strand = Plus / Minus

                                                                            
Query: 1        ttcttcggcgcgctgcgggcacgggtgtacgacgacgaggtgcgcaagtgggtcggcgag 60
                |||||||| ||||||||||| |||||||||| ||||||||||||   |||||| ||||  
Sbjct: 28290009 ttcttcggggcgctgcgggcgcgggtgtacggcgacgaggtgcggcggtgggt-ggcgga 28289951

                                   
Query: 61       natcggcgtggagaacatc 79
                 ||||| ||||||||||||
Sbjct: 28289950 gatcggggtggagaacatc 28289932



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 47/53 (88%)
 Strand = Plus / Minus

                                                                     
Query: 1        ttcttcggcgcgctgcgggcacgggtgtacgacgacgaggtgcgcaagtgggt 53
                ||||||||||| || || || || || ||||||||||||||||||||||||||
Sbjct: 28286179 ttcttcggcgctcttcgtgcccgtgtttacgacgacgaggtgcgcaagtgggt 28286127
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>gb|AF338238.1|AF338238 Zantedeschia aethiopica rubisco activase (rca2) mRNA, partial cds
          Length = 1436

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 114/132 (86%), Gaps = 3/132 (2%)
 Strand = Plus / Plus

                                                                       
Query: 104 ggaggggccgcccacgttcgaccagcccaaggatgaccatagagaagctcatgggagtac 163
           |||||||||||| |||||||  ||||||||| |||||| | || |||||  ||| |||||
Sbjct: 824 ggaggggccgccgacgttcgcgcagcccaag-atgaccctggacaagctgctgg-agtac 881

                                                                       
Query: 164 ggccacatgctggtccagggagcaggagaacgtcaagcgtgtgcagctcgccgacaagta 223
           ||| |||||||||| |||| ||||||||||||| ||| | |||||||| |||||||||||
Sbjct: 882 ggcaacatgctggtgcagg-agcaggagaacgtgaagagggtgcagctggccgacaagta 940

                       
Query: 224 cctcagcgaggc 235
           ||| ||||||||
Sbjct: 941 cctgagcgaggc 952
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>gb|AF338237.1|AF338237 Zantedeschia aethiopica rubisco activase (rca1) mRNA, partial cds
          Length = 1597

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 114/132 (86%), Gaps = 3/132 (2%)
 Strand = Plus / Plus

                                                                        
Query: 104  ggaggggccgcccacgttcgaccagcccaaggatgaccatagagaagctcatgggagtac 163
            |||||||||||| |||||||  ||||||||| |||||| | || |||||  ||| |||||
Sbjct: 1018 ggaggggccgccgacgttcgcgcagcccaag-atgaccctggacaagctgctgg-agtac 1075

                                                                        
Query: 164  ggccacatgctggtccagggagcaggagaacgtcaagcgtgtgcagctcgccgacaagta 223
            ||| |||||||||| |||| ||||||||||||| ||| | |||||||| |||||||||||
Sbjct: 1076 ggcaacatgctggtgcagg-agcaggagaacgtgaagagggtgcagctggccgacaagta 1134

                        
Query: 224  cctcagcgaggc 235
            ||| ||||||||
Sbjct: 1135 cctgagcgaggc 1146
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>dbj|AB110180.1| Oryza sativa (japonica cultivar-group) mRNA for ribulose-bisphosphate
            carboxylase activase large isoform precursor protein,
            complete cds, clone: 13YPR038
          Length = 1558

 Score = 79.8 bits (40), Expect = 8e-12
 Identities = 139/168 (82%), Gaps = 3/168 (1%)
 Strand = Plus / Plus

                                                                        
Query: 119  gttcgaccagcccaaggatgaccatagagaagctcatgggagtacggccacatgctggtc 178
            |||||| ||||||||| ||||| || || |||||||||| |||||||  ||||||| || 
Sbjct: 1145 gttcgagcagcccaag-atgacgatcgaaaagctcatgg-agtacggatacatgcttgtg 1202

                                                                        
Query: 179  cagggagcaggagaacgtcaagcgtgtgcagctcgccgacaagtacctcagcgaggcggc 238
             ||| |||||||||||||||||||||||||||| || ||  ||||| | |||||||| ||
Sbjct: 1203 aagg-agcaggagaacgtcaagcgtgtgcagctggctgagcagtacttgagcgaggctgc 1261

                                                            
Query: 239  gctcggccaagccaacgacgacgccatgaagaccggtgccttctacgg 286
             || ||  | || |||  ||||||||||||||| ||| ||||||||||
Sbjct: 1262 tcttggtgacgctaactccgacgccatgaagactggttccttctacgg 1309



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 47/53 (88%)
 Strand = Plus / Plus

                                                                 
Query: 1    ttcttcggcgcgctgcgggcacgggtgtacgacgacgaggtgcgcaagtgggt 53
            ||||||||||| || || || || || ||||||||||||||||||||||||||
Sbjct: 1029 ttcttcggcgctcttcgtgcccgtgtttacgacgacgaggtgcgcaagtgggt 1081
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>gb|AF338240.1|AF338240 Zantedeschia aethiopica rubisco activase (rca4) mRNA, partial cds
          Length = 1674

 Score = 79.8 bits (40), Expect = 8e-12
 Identities = 112/132 (84%), Gaps = 3/132 (2%)
 Strand = Plus / Plus

                                                                        
Query: 104  ggaggggccgcccacgttcgaccagcccaaggatgaccatagagaagctcatgggagtac 163
            |||||||||||| |||||||  ||||||||| |||||| | || |||||  ||| |||||
Sbjct: 1125 ggaggggccgccgacgttcgcgcagcccaag-atgaccctggacaagctgctgg-agtac 1182

                                                                        
Query: 164  ggccacatgctggtccagggagcaggagaacgtcaagcgtgtgcagctcgccgacaagta 223
            ||| | |||||||| |||| | ||||||||||| ||| | |||||||| |||||||||||
Sbjct: 1183 ggcaatatgctggtgcaggaa-caggagaacgtgaagagggtgcagctggccgacaagta 1241

                        
Query: 224  cctcagcgaggc 235
            ||| ||||||||
Sbjct: 1242 cctgagcgaggc 1253
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>gb|AF338239.1|AF338239 Zantedeschia aethiopica rubisco activase (rca3) mRNA, partial cds
          Length = 1494

 Score = 79.8 bits (40), Expect = 8e-12
 Identities = 112/132 (84%), Gaps = 3/132 (2%)
 Strand = Plus / Plus

                                                                        
Query: 104  ggaggggccgcccacgttcgaccagcccaaggatgaccatagagaagctcatgggagtac 163
            |||||||||||| |||||||  ||||||||| |||||| | || |||||  ||| |||||
Sbjct: 988  ggaggggccgccgacgttcgcgcagcccaag-atgaccctggacaagctgctgg-agtac 1045

                                                                        
Query: 164  ggccacatgctggtccagggagcaggagaacgtcaagcgtgtgcagctcgccgacaagta 223
            ||| | |||||||| |||| | ||||||||||| ||| | |||||||| |||||||||||
Sbjct: 1046 ggcaatatgctggtgcaggaa-caggagaacgtgaagagggtgcagctggccgacaagta 1104

                        
Query: 224  cctcagcgaggc 235
            ||| ||||||||
Sbjct: 1105 cctgagcgaggc 1116
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>dbj|AK119513.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-200-F01, full
            insert sequence
          Length = 1721

 Score = 79.8 bits (40), Expect = 8e-12
 Identities = 139/168 (82%), Gaps = 3/168 (1%)
 Strand = Plus / Plus

                                                                        
Query: 119  gttcgaccagcccaaggatgaccatagagaagctcatgggagtacggccacatgctggtc 178
            |||||| ||||||||| ||||| || || |||||||||| |||||||  ||||||| || 
Sbjct: 1193 gttcgagcagcccaag-atgacgatcgaaaagctcatgg-agtacggatacatgcttgtg 1250

                                                                        
Query: 179  cagggagcaggagaacgtcaagcgtgtgcagctcgccgacaagtacctcagcgaggcggc 238
             ||| |||||||||||||||||||||||||||| || ||  ||||| | |||||||| ||
Sbjct: 1251 aagg-agcaggagaacgtcaagcgtgtgcagctggctgagcagtacttgagcgaggctgc 1309

                                                            
Query: 239  gctcggccaagccaacgacgacgccatgaagaccggtgccttctacgg 286
             || ||  | || |||  ||||||||||||||| ||| ||||||||||
Sbjct: 1310 tcttggtgacgctaactccgacgccatgaagactggttccttctacgg 1357



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 47/53 (88%)
 Strand = Plus / Plus

                                                                 
Query: 1    ttcttcggcgcgctgcgggcacgggtgtacgacgacgaggtgcgcaagtgggt 53
            ||||||||||| || || || || || ||||||||||||||||||||||||||
Sbjct: 1077 ttcttcggcgctcttcgtgcccgtgtttacgacgacgaggtgcgcaagtgggt 1129
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>dbj|AK104332.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-032-F04, full
            insert sequence
          Length = 1682

 Score = 79.8 bits (40), Expect = 8e-12
 Identities = 139/168 (82%), Gaps = 3/168 (1%)
 Strand = Plus / Plus

                                                                        
Query: 119  gttcgaccagcccaaggatgaccatagagaagctcatgggagtacggccacatgctggtc 178
            |||||| ||||||||| ||||| || || |||||||||| |||||||  ||||||| || 
Sbjct: 1144 gttcgagcagcccaag-atgacgatcgaaaagctcatgg-agtacggatacatgcttgtg 1201

                                                                        
Query: 179  cagggagcaggagaacgtcaagcgtgtgcagctcgccgacaagtacctcagcgaggcggc 238
             ||| |||||||||||||||||||||||||||| || ||  ||||| | |||||||| ||
Sbjct: 1202 aagg-agcaggagaacgtcaagcgtgtgcagctggctgagcagtacttgagcgaggctgc 1260

                                                            
Query: 239  gctcggccaagccaacgacgacgccatgaagaccggtgccttctacgg 286
             || ||  | || |||  ||||||||||||||| ||| ||||||||||
Sbjct: 1261 tcttggtgacgctaactccgacgccatgaagactggttccttctacgg 1308



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 47/53 (88%)
 Strand = Plus / Plus

                                                                 
Query: 1    ttcttcggcgcgctgcgggcacgggtgtacgacgacgaggtgcgcaagtgggt 53
            ||||||||||| || || || || || ||||||||||||||||||||||||||
Sbjct: 1028 ttcttcggcgctcttcgtgcccgtgtttacgacgacgaggtgcgcaagtgggt 1080
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>dbj|AK064986.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001C24, full
            insert sequence
          Length = 1680

 Score = 79.8 bits (40), Expect = 8e-12
 Identities = 139/168 (82%), Gaps = 3/168 (1%)
 Strand = Plus / Plus

                                                                        
Query: 119  gttcgaccagcccaaggatgaccatagagaagctcatgggagtacggccacatgctggtc 178
            |||||| ||||||||| ||||| || || |||||||||| |||||||  ||||||| || 
Sbjct: 1182 gttcgagcagcccaag-atgacgatcgaaaagctcatgg-agtacggatacatgcttgtg 1239

                                                                        
Query: 179  cagggagcaggagaacgtcaagcgtgtgcagctcgccgacaagtacctcagcgaggcggc 238
             ||| |||||||||||||||||||||||||||| || ||  ||||| | |||||||| ||
Sbjct: 1240 aagg-agcaggagaacgtcaagcgtgtgcagctggctgagcagtacttgagcgaggctgc 1298

                                                            
Query: 239  gctcggccaagccaacgacgacgccatgaagaccggtgccttctacgg 286
             || ||  | || |||  ||||||||||||||| ||| ||||||||||
Sbjct: 1299 tcttggtgacgctaactccgacgccatgaagactggttccttctacgg 1346



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 47/53 (88%)
 Strand = Plus / Plus

                                                                 
Query: 1    ttcttcggcgcgctgcgggcacgggtgtacgacgacgaggtgcgcaagtgggt 53
            ||||||||||| || || || || || ||||||||||||||||||||||||||
Sbjct: 1066 ttcttcggcgctcttcgtgcccgtgtttacgacgacgaggtgcgcaagtgggt 1118
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>dbj|AK060847.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-E04, full
            insert sequence
          Length = 1691

 Score = 79.8 bits (40), Expect = 8e-12
 Identities = 139/168 (82%), Gaps = 3/168 (1%)
 Strand = Plus / Plus

                                                                        
Query: 119  gttcgaccagcccaaggatgaccatagagaagctcatgggagtacggccacatgctggtc 178
            |||||| ||||||||| ||||| || || |||||||||| |||||||  ||||||| || 
Sbjct: 1181 gttcgagcagcccaag-atgacgatcgaaaagctcatgg-agtacggatacatgcttgtg 1238

                                                                        
Query: 179  cagggagcaggagaacgtcaagcgtgtgcagctcgccgacaagtacctcagcgaggcggc 238
             ||| |||||||||||||||||||||||||||| || ||  ||||| | |||||||| ||
Sbjct: 1239 aagg-agcaggagaacgtcaagcgtgtgcagctggctgagcagtacttgagcgaggctgc 1297

                                                            
Query: 239  gctcggccaagccaacgacgacgccatgaagaccggtgccttctacgg 286
             || ||  | || |||  ||||||||||||||| ||| ||||||||||
Sbjct: 1298 tcttggtgacgctaactccgacgccatgaagactggttccttctacgg 1345



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 47/53 (88%)
 Strand = Plus / Plus

                                                                 
Query: 1    ttcttcggcgcgctgcgggcacgggtgtacgacgacgaggtgcgcaagtgggt 53
            ||||||||||| || || || || || ||||||||||||||||||||||||||
Sbjct: 1065 ttcttcggcgctcttcgtgcccgtgtttacgacgacgaggtgcgcaagtgggt 1117
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>dbj|AK060841.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-D05, full
            insert sequence
          Length = 1470

 Score = 79.8 bits (40), Expect = 8e-12
 Identities = 139/168 (82%), Gaps = 3/168 (1%)
 Strand = Plus / Plus

                                                                        
Query: 119  gttcgaccagcccaaggatgaccatagagaagctcatgggagtacggccacatgctggtc 178
            |||||| ||||||||| ||||| || || |||||||||| |||||||  ||||||| || 
Sbjct: 965  gttcgagcagcccaag-atgacgatcgaaaagctcatgg-agtacggatacatgcttgtg 1022

                                                                        
Query: 179  cagggagcaggagaacgtcaagcgtgtgcagctcgccgacaagtacctcagcgaggcggc 238
             ||| |||||||||||||||||||||||||||| || ||  ||||| | |||||||| ||
Sbjct: 1023 aagg-agcaggagaacgtcaagcgtgtgcagctggctgagcagtacttgagcgaggctgc 1081

                                                            
Query: 239  gctcggccaagccaacgacgacgccatgaagaccggtgccttctacgg 286
             || ||  | || |||  ||||||||||||||| ||| ||||||||||
Sbjct: 1082 tcttggtgacgctaactccgacgccatgaagactggttccttctacgg 1129



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 47/53 (88%)
 Strand = Plus / Plus

                                                                
Query: 1   ttcttcggcgcgctgcgggcacgggtgtacgacgacgaggtgcgcaagtgggt 53
           ||||||||||| || || || || || ||||||||||||||||||||||||||
Sbjct: 849 ttcttcggcgctcttcgtgcccgtgtttacgacgacgaggtgcgcaagtgggt 901
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>dbj|AB034748.1| Oryza sativa OsrcaA2 mRNA for RuBisCO activase small isoform
            precursor, complete cds
          Length = 1706

 Score = 79.8 bits (40), Expect = 8e-12
 Identities = 139/168 (82%), Gaps = 3/168 (1%)
 Strand = Plus / Plus

                                                                        
Query: 119  gttcgaccagcccaaggatgaccatagagaagctcatgggagtacggccacatgctggtc 178
            |||||| ||||||||| ||||| || || |||||||||| |||||||  ||||||| || 
Sbjct: 1186 gttcgagcagcccaag-atgacgatcgaaaagctcatgg-agtacggatacatgcttgtg 1243

                                                                        
Query: 179  cagggagcaggagaacgtcaagcgtgtgcagctcgccgacaagtacctcagcgaggcggc 238
             ||| |||||||||||||||||||||||||||| || ||  ||||| | |||||||| ||
Sbjct: 1244 aagg-agcaggagaacgtcaagcgtgtgcagctggctgagcagtacttgagcgaggctgc 1302

                                                            
Query: 239  gctcggccaagccaacgacgacgccatgaagaccggtgccttctacgg 286
             || ||  | || |||  ||||||||||||||| ||| ||||||||||
Sbjct: 1303 tcttggtgacgctaactccgacgccatgaagactggttccttctacgg 1350



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 47/53 (88%)
 Strand = Plus / Plus

                                                                 
Query: 1    ttcttcggcgcgctgcgggcacgggtgtacgacgacgaggtgcgcaagtgggt 53
            ||||||||||| || || || || || ||||||||||||||||||||||||||
Sbjct: 1070 ttcttcggcgctcttcgtgcccgtgtttacgacgacgaggtgcgcaagtgggt 1122
to top
>dbj|AB034698.1| Oryza sativa OsrcaA1 mRNA for RuBisCO activase large isoform
            precursor, complete cds
          Length = 1623

 Score = 79.8 bits (40), Expect = 8e-12
 Identities = 139/168 (82%), Gaps = 3/168 (1%)
 Strand = Plus / Plus

                                                                        
Query: 119  gttcgaccagcccaaggatgaccatagagaagctcatgggagtacggccacatgctggtc 178
            |||||| ||||||||| ||||| || || |||||||||| |||||||  ||||||| || 
Sbjct: 1180 gttcgagcagcccaag-atgacgatcgaaaagctcatgg-agtacggatacatgcttgtg 1237

                                                                        
Query: 179  cagggagcaggagaacgtcaagcgtgtgcagctcgccgacaagtacctcagcgaggcggc 238
             ||| |||||||||||||||||||||||||||| || ||  ||||| | |||||||| ||
Sbjct: 1238 aagg-agcaggagaacgtcaagcgtgtgcagctggctgagcagtacttgagcgaggctgc 1296

                                                            
Query: 239  gctcggccaagccaacgacgacgccatgaagaccggtgccttctacgg 286
             || ||  | || |||  ||||||||||||||| ||| ||||||||||
Sbjct: 1297 tcttggtgacgctaactccgacgccatgaagactggttccttctacgg 1344



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 47/53 (88%)
 Strand = Plus / Plus

                                                                 
Query: 1    ttcttcggcgcgctgcgggcacgggtgtacgacgacgaggtgcgcaagtgggt 53
            ||||||||||| || || || || || ||||||||||||||||||||||||||
Sbjct: 1064 ttcttcggcgctcttcgtgcccgtgtttacgacgacgaggtgcgcaagtgggt 1116
to top
>gb|AY312573.1| Deschampsia antarctica Rubisco activase alpha form precursor (RCA1)
            mRNA, complete cds; nuclear gene for chloroplast product
          Length = 1616

 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 49/53 (92%)
 Strand = Plus / Plus

                                                                 
Query: 1    ttcttcggcgcgctgcgggcacgggtgtacgacgacgaggtgcgcaagtgggt 53
            |||||||| || ||||| || ||||||||||||||||||||||||||||||||
Sbjct: 1082 ttcttcggtgctctgcgtgctcgggtgtacgacgacgaggtgcgcaagtgggt 1134



 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 51/55 (92%), Gaps = 1/55 (1%)
 Strand = Plus / Plus

                                                                   
Query: 157  ggagtacggccacatgctggtccagggagcaggagaacgtcaagcgtgtgcagct 211
            |||||||||||||||||| ||||||| ||||||| || |||||||||||||||||
Sbjct: 1234 ggagtacggccacatgcttgtccagg-agcaggacaatgtcaagcgtgtgcagct 1287
to top
>gb|U74321.1|OSU74321 Oryza sativa ribulose-1,5-bisphosphate carboxylase/oxygenase activase
            (rca) mRNA, complete cds
          Length = 1675

 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 88/105 (83%)
 Strand = Plus / Plus

                                                                        
Query: 182  ggagcaggagaacgtcaagcgtgtgcagctcgccgacaagtacctcagcgaggcggcgct 241
            |||||||||||||||||||||||||||||| || ||  ||||| | |||||||| || ||
Sbjct: 1210 ggagcaggagaacgtcaagcgtgtgcagctggctgagcagtacttgagcgaggctgctct 1269

                                                         
Query: 242  cggccaagccaacgacgacgccatgaagaccggtgccttctacgg 286
             ||  | || |||  ||||||||||||||| ||| ||||||||||
Sbjct: 1270 tggtgacgctaactccgacgccatgaagactggttccttctacgg 1314



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 47/53 (88%)
 Strand = Plus / Plus

                                                                 
Query: 1    ttcttcggcgcgctgcgggcacgggtgtacgacgacgaggtgcgcaagtgggt 53
            ||||||||||| || || || || || ||||||||||||||||||||||||||
Sbjct: 1034 ttcttcggcgctcttcgtgcccgtgtttacgacgacgaggtgcgcaagtgggt 1086
to top
>gb|AF349638.1|AF349638 Oryza sativa ribulose-1,5-bisphosphate carboxylase activase mRNA,
           partial cds; nuclear gene for chloroplast product
          Length = 651

 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 88/105 (83%)
 Strand = Plus / Plus

                                                                       
Query: 182 ggagcaggagaacgtcaagcgtgtgcagctcgccgacaagtacctcagcgaggcggcgct 241
           |||||||||||||||||||||||||||||| || ||  ||||| | |||||||| || ||
Sbjct: 459 ggagcaggagaacgtcaagcgtgtgcagctggctgagcagtacttgagcgaggctgctct 518

                                                        
Query: 242 cggccaagccaacgacgacgccatgaagaccggtgccttctacgg 286
            ||  | || |||  ||||||||||||||| ||| ||||||||||
Sbjct: 519 tggtgacgctaactccgacgccatgaagactggttccttctacgg 563



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 47/53 (88%)
 Strand = Plus / Plus

                                                                
Query: 1   ttcttcggcgcgctgcgggcacgggtgtacgacgacgaggtgcgcaagtgggt 53
           ||||||||||| || || || || || ||||||||||||||||||||||||||
Sbjct: 283 ttcttcggcgctcttcgtgcccgtgtttacgacgacgaggtgcgcaagtgggt 335
to top
>gb|AY312574.1| Deschampsia antarctica Rubisco activase beta form precursor (RCA2)
            mRNA, complete cds; nuclear gene for chloroplast product
          Length = 1646

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 51/55 (92%), Gaps = 1/55 (1%)
 Strand = Plus / Plus

                                                                   
Query: 157  ggagtacggccacatgctggtccagggagcaggagaacgtcaagcgtgtgcagct 211
            |||||||||||||||||| ||||||| ||||||| || |||||||||||||||||
Sbjct: 1224 ggagtacggccacatgcttgtccagg-agcaggacaatgtcaagcgtgtgcagct 1277



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 47/53 (88%)
 Strand = Plus / Plus

                                                                 
Query: 1    ttcttcggcgcgctgcgggcacgggtgtacgacgacgaggtgcgcaagtgggt 53
            |||||||| || ||||| || |||||||||||||  |||||||||||||||||
Sbjct: 1072 ttcttcggtgctctgcgtgctcgggtgtacgacgttgaggtgcgcaagtgggt 1124
to top
>gb|AY206372.1| Triticum aestivum ribulose-1,5-bisphosphate carboxylase activase
           precursor RNA, partial cds; nuclear gene for chloroplast
           product
          Length = 850

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 46/50 (92%)
 Strand = Plus / Plus

                                                             
Query: 4   ttcggcgcgctgcgggcacgggtgtacgacgacgaggtgcgcaagtgggt 53
           ||||| || ||||| || ||||||||||||||||||||||||||||||||
Sbjct: 214 ttcggtgctctgcgtgctcgggtgtacgacgacgaggtgcgcaagtgggt 263



 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 49/54 (90%), Gaps = 1/54 (1%)
 Strand = Plus / Plus

                                                                 
Query: 158 gagtacggccacatgctggtccagggagcaggagaacgtcaagcgtgtgcagct 211
           |||||||| |||||||| ||||||| ||||||| || |||||||||||||||||
Sbjct: 364 gagtacgggcacatgctcgtccagg-agcaggacaatgtcaagcgtgtgcagct 416
to top
>gb|BC029790.1| Homo sapiens, clone IMAGE:5192697, mRNA
          Length = 1643

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 46/50 (92%)
 Strand = Plus / Plus

                                                              
Query: 4    ttcggcgcgctgcgggcacgggtgtacgacgacgaggtgcgcaagtgggt 53
            ||||| || ||||| || ||||||||||||||||||||||||||||||||
Sbjct: 1064 ttcggtgctctgcgtgctcgggtgtacgacgacgaggtgcgcaagtgggt 1113



 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 49/54 (90%), Gaps = 1/54 (1%)
 Strand = Plus / Plus

                                                                  
Query: 158  gagtacggccacatgctggtccagggagcaggagaacgtcaagcgtgtgcagct 211
            |||||||| |||||||| ||||||| ||||||| || |||||||||||||||||
Sbjct: 1214 gagtacgggcacatgctcgtccagg-agcaggacaatgtcaagcgtgtgcagct 1266
to top
>emb|AJ635203.1| Triticum durum ssp. durum partial mRNA for putative rubisco
          activase (rba1 gene)
          Length = 321

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 46/50 (92%)
 Strand = Plus / Plus

                                                            
Query: 4  ttcggcgcgctgcgggcacgggtgtacgacgacgaggtgcgcaagtgggt 53
          ||||| || ||||| || ||||||||||||||||||||||||||||||||
Sbjct: 8  ttcggtgctctgcgtgctcgggtgtacgacgacgaggtgcgcaagtgggt 57



 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 49/54 (90%), Gaps = 1/54 (1%)
 Strand = Plus / Plus

                                                                 
Query: 158 gagtacggccacatgctggtccagggagcaggagaacgtcaagcgtgtgcagct 211
           |||||||| |||||||| ||||||| ||||||| || |||||||||||||||||
Sbjct: 158 gagtacgggcacatgctcgtccagg-agcaggacaatgtcaagcgtgtgcagct 210
to top
>gb|M55447.1|BLYRCAA2 Hordeum vulgare rubisco activase (RcaA2) mRNA, complete cds
          Length = 1709

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 49/54 (90%)
 Strand = Plus / Plus

                                                                  
Query: 4    ttcggcgcgctgcgggcacgggtgtacgacgacgaggtgcgcaagtgggtcggc 57
            ||||| || ||||| || |||||||||||||| |||||||||||||||||||||
Sbjct: 1144 ttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgggtcggc 1197



 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 49/54 (90%), Gaps = 1/54 (1%)
 Strand = Plus / Plus

                                                                  
Query: 158  gagtacggccacatgctggtccagggagcaggagaacgtcaagcgtgtgcagct 211
            |||||||| |||||||| ||||||| ||||||| || |||||||||||||||||
Sbjct: 1294 gagtacgggcacatgctcgtccagg-agcaggacaatgtcaagcgtgtgcagct 1346
to top
>gb|M55446.1|BLYRCAA1 Hordeum vulgare rubisco activase (RcaA1) mRNA, 3' end
          Length = 1394

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 49/54 (90%)
 Strand = Plus / Plus

                                                                 
Query: 4   ttcggcgcgctgcgggcacgggtgtacgacgacgaggtgcgcaagtgggtcggc 57
           ||||| || ||||| || |||||||||||||| |||||||||||||||||||||
Sbjct: 889 ttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgggtcggc 942



 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 49/54 (90%), Gaps = 1/54 (1%)
 Strand = Plus / Plus

                                                                  
Query: 158  gagtacggccacatgctggtccagggagcaggagaacgtcaagcgtgtgcagct 211
            |||||||| |||||||| ||||||| ||||||| || |||||||||||||||||
Sbjct: 1039 gagtacgggcacatgctcgtccagg-agcaggacaatgtcaagcgtgtgcagct 1091
to top
>gb|AY461703.1| Chlamydomonas reinhardtii rubisco activase (Rca) gene, complete cds
          Length = 4500

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 33/35 (94%)
 Strand = Plus / Plus

                                               
Query: 183  gagcaggagaacgtcaagcgtgtgcagctcgccga 217
            |||||||||||||||||||| |||||||| |||||
Sbjct: 3205 gagcaggagaacgtcaagcgcgtgcagctggccga 3239



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 44/51 (86%)
 Strand = Plus / Plus

                                                               
Query: 1    ttcttcggcgcgctgcgggcacgggtgtacgacgacgaggtgcgcaagtgg 51
            ||||||||||| ||||| || || ||||||||||||  ||||||| |||||
Sbjct: 2689 ttcttcggcgccctgcgtgcccgcgtgtacgacgacatggtgcgccagtgg 2739
to top
>gb|M62962.1|CRERBCOA C.reinhardtii ribulose 1,5-bisphosphate carboxylase/oxygenase
            activase mRNA, complete cds
          Length = 1693

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 33/35 (94%)
 Strand = Plus / Plus

                                               
Query: 183  gagcaggagaacgtcaagcgtgtgcagctcgccga 217
            |||||||||||||||||||| |||||||| |||||
Sbjct: 1173 gagcaggagaacgtcaagcgcgtgcagctggccga 1207



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 44/51 (86%)
 Strand = Plus / Plus

                                                               
Query: 1    ttcttcggcgcgctgcgggcacgggtgtacgacgacgaggtgcgcaagtgg 51
            ||||||||||| ||||| || || ||||||||||||  ||||||| |||||
Sbjct: 999  ttcttcggcgccctgcgtgcccgcgtgtacgacgacatggtgcgccagtgg 1049
to top
>emb|Y10657.1|CLRCAGENE C.littorale rca gene
          Length = 2513

 Score = 48.1 bits (24), Expect = 0.027
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                            
Query: 183  gagcaggagaacgtcaagcgtgtgcagctcgc 214
            ||||||||||| |||||||| |||||||||||
Sbjct: 2105 gagcaggagaatgtcaagcgcgtgcagctcgc 2136
to top
>gb|AC079326.8| Homo sapiens chromosome 11, clone RP11-233I10, complete sequence
          Length = 180353

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 419    aaagagaaaggaattgtatatgttcttaa 447
              ||||||||||||||||| |||||| ||||
Sbjct: 123387 aaagagaaaggaattgtgtatgttattaa 123415
to top
>gb|AC091097.8| Homo sapiens chromosome 11, clone RP11-65C9, complete sequence
          Length = 162515

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 419    aaagagaaaggaattgtatatgttcttaa 447
              ||||||||||||||||| |||||| ||||
Sbjct: 140931 aaagagaaaggaattgtgtatgttattaa 140903
to top
>ref|NM_124725.2| Arabidopsis thaliana GLT1 AT5G53460 (GLT1) mRNA, complete cds
          Length = 6627

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 444 ttaaatcgtcattttccgct 463
           ||||||||||||||||||||
Sbjct: 278 ttaaatcgtcattttccgct 297
to top
>gb|AC155204.4| Colobus guereza clone CH272-163G5, complete sequence
          Length = 26789

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 419   aaagagaaaggaattgtata 438
             ||||||||||||||||||||
Sbjct: 16435 aaagagaaaggaattgtata 16416
to top
>gb|AC091381.3| Papio anubis clone RP41-468N20, complete sequence
          Length = 156353

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 419    aaagagaaaggaattgtata 438
              ||||||||||||||||||||
Sbjct: 124727 aaagagaaaggaattgtata 124708
to top
>gb|AY312575.1| Larrea tridentata Rubisco activase alpha form precursor (RCA1) mRNA,
            complete cds; nuclear gene for chloroplast product
          Length = 1724

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 30/32 (93%), Gaps = 1/32 (3%)
 Strand = Plus / Plus

                                            
Query: 169  catgctggtccagggagcaggagaacgtcaag 200
            |||||| ||||||| |||||||||||||||||
Sbjct: 1263 catgcttgtccagg-agcaggagaacgtcaag 1293
to top
>gb|AC124814.10| Mus musculus chromosome 1, clone RP24-119P5, complete sequence
          Length = 162020

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 314    atgcatgcatgcactatatatatg 337
              |||||||||||||||||| |||||
Sbjct: 122721 atgcatgcatgcactatacatatg 122744
to top
>gb|AC093889.2| Homo sapiens BAC clone RP11-671G14 from 7, complete sequence
          Length = 198453

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 318   atgcatgcactatatatatg 337
             ||||||||||||||||||||
Sbjct: 31492 atgcatgcactatatatatg 31511
to top
>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence
          Length = 4895836

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 6       cggcgcgctgcgggcacggg 25
               ||||||||||||||||||||
Sbjct: 2456155 cggcgcgctgcgggcacggg 2456174
to top
>emb|CR933822.8| Zebrafish DNA sequence from clone DKEY-30F7 in linkage group 19,
             complete sequence
          Length = 187377

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 314   atgcatgcatgcactatata 333
             ||||||||||||||||||||
Sbjct: 65551 atgcatgcatgcactatata 65570
to top
>emb|AL589679.14| Mouse DNA sequence from clone RP23-189A16 on chromosome 13 Contains the
              3' end of the Csh1 gene for chorionic somatomammotropin
              hormone 1,  two genes for novel proteins similar to
              chorionic somatomammotropin hormone 1 (Csh1), the Prlpi
              gene for prolactin-like protein I (Prlpj, decidualin), the
              Csh2 gene for chorionic somatomammotropin hormone 2, the
              gene for protein 1600016E11RIK similar to prolactin and a
              novel gene (4930511O05Rik), complete sequence
          Length = 207737

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 325    cactatatatatgttggactattt 348
              |||||||||||| |||||||||||
Sbjct: 162403 cactatatatattttggactattt 162426
to top
>gb|DQ430613.1| Sorghum propinquum locus S10003 genomic sequence
          Length = 619

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                               
Query: 1   ttcttcggcgcgctgcgggcacgggtgtacgacgac 36
           ||||||||||| || || || |||||||||||||||
Sbjct: 584 ttcttcggcgccctccgcgcccgggtgtacgacgac 619
to top
>gb|DQ430604.1| Sorghum bicolor voucher NSL56174 locus S10003 genomic sequence
          Length = 627

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                               
Query: 1   ttcttcggcgcgctgcgggcacgggtgtacgacgac 36
           ||||||||||| || || || |||||||||||||||
Sbjct: 592 ttcttcggcgccctccgcgcccgggtgtacgacgac 627
to top
>gb|DP000005.1| Macaca mulatta target 1 genomic scaffold
          Length = 1678549

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 419     aaagagaaaggaattgtata 438
               ||||||||||||||||||||
Sbjct: 1390510 aaagagaaaggaattgtata 1390491
to top
>dbj|AB169855.1| Macaca fascicularis brain cDNA, clone: QccE-13787, similar to human
            EH-domain containing 1 (EHD1), mRNA, RefSeq: NM_006795.2
          Length = 3456

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 175  ggtccagggagcaggagaac 194
            ||||||||||||||||||||
Sbjct: 2492 ggtccagggagcaggagaac 2511
to top
>gb|AC024259.17| Homo sapiens chromosome 7 clone RP11-105B19, complete sequence
          Length = 177303

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 318   atgcatgcactatatatatg 337
             ||||||||||||||||||||
Sbjct: 68652 atgcatgcactatatatatg 68633
to top
>gb|DP000029.1| Cercopithecus aethiops target 1 genomic scaffold
          Length = 1825024

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 419     aaagagaaaggaattgtata 438
               ||||||||||||||||||||
Sbjct: 1413326 aaagagaaaggaattgtata 1413307
to top
>gb|AC123966.4| Macaca mulatta clone CH250-72H9, complete sequence
          Length = 114602

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 419   aaagagaaaggaattgtata 438
             ||||||||||||||||||||
Sbjct: 65226 aaagagaaaggaattgtata 65207
to top
>gb|AC092162.3| Homo sapiens BAC clone RP11-632P5 from 2, complete sequence
          Length = 155011

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 411   tcttnttgaaagagaaaggaatt 433
             |||| ||||||||||||||||||
Sbjct: 63465 tctttttgaaagagaaaggaatt 63443
to top
>gb|AC154224.1| Mus musculus BAC clone RP24-141J15 from chromosome 13, complete
           sequence
          Length = 146998

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 320 gcatgcactatatatatgtt 339
           ||||||||||||||||||||
Sbjct: 90  gcatgcactatatatatgtt 109
to top
>gb|AC098590.3| Homo sapiens BAC clone RP11-324J13 from 4, complete sequence
          Length = 157544

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 315    tgcatgcatgcactatatatatgt 338
              |||||||||| |||||||||||||
Sbjct: 121036 tgcatgcatgtactatatatatgt 121059
to top
>gb|AC078941.6| Homo sapiens BAC clone RP11-180B10 from 2, complete sequence
          Length = 165176

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 419   aaagagaaaggaattgtatatgttctta 446
             ||||||||||||||||||| ||| ||||
Sbjct: 33392 aaagagaaaggaattgtatctgtactta 33365
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>dbj|AB020754.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MYN8
          Length = 54528

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 444   ttaaatcgtcattttccgct 463
             ||||||||||||||||||||
Sbjct: 41556 ttaaatcgtcattttccgct 41575
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>emb|CR956397.19| Pig DNA sequence from clone CH242-259E5 on chromosome 17, complete
              sequence
          Length = 177531

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 97     ctccaggggaggggccgccc 116
              ||||||||||||||||||||
Sbjct: 148648 ctccaggggaggggccgccc 148667
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>gb|AC154184.1| Mus musculus BAC clone RP24-67K24 from 13, complete sequence
          Length = 151468

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 320   gcatgcactatatatatgtt 339
             ||||||||||||||||||||
Sbjct: 19309 gcatgcactatatatatgtt 19290
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>gb|AC138437.3| Cercopithecus aethiops clone CH252-390I5, complete sequence
          Length = 182169

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 419    aaagagaaaggaattgtata 438
              ||||||||||||||||||||
Sbjct: 109427 aaagagaaaggaattgtata 109408
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>emb|AL805929.7| Mouse DNA sequence from clone RP23-252O5 on chromosome X, complete
             sequence
          Length = 175802

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 307   acttaagatgcatgcatgca 326
             ||||||||||||||||||||
Sbjct: 22306 acttaagatgcatgcatgca 22325


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,725,271
Number of Sequences: 3902068
Number of extensions: 3725271
Number of successful extensions: 76547
Number of sequences better than 10.0: 61
Number of HSP's better than 10.0 without gapping: 60
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 76252
Number of HSP's gapped (non-prelim): 250
length of query: 483
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 461
effective length of database: 17,147,199,772
effective search space: 7904859094892
effective search space used: 7904859094892
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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