ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal25j23 |
|---|---|
| Clone Library Name | barley_pub |
>FILA_MOUSE (P11088) Filaggrin (Fragment)| Length = 336 Score = 37.0 bits (84), Expect = 0.012 Identities = 27/74 (36%), Positives = 32/74 (43%), Gaps = 11/74 (14%) Frame = +3 Query: 90 QGHEVEHQHQGRGGLPRLRHREQ-----GHWPGHQ------ALPRPVPPCASGAVQPGLS 236 +GH+ +HQHQ P HR+Q GH HQ A PR S + S Sbjct: 176 RGHQHQHQHQHEHEQPESGHRQQQSSGRGHQGAHQEQGRDSARPRGSNQGHSSSRHQADS 235 Query: 237 GRVGAVDGEQGRGQ 278 RV A G GRGQ Sbjct: 236 PRVSARSGSGGRGQ 249
>ACSA_DROME (Q9VP61) Acetyl-coenzyme A synthetase (EC 6.2.1.1) (Acetate--CoA| ligase) (Acyl-activating enzyme) (Acetyl-CoA synthetase) (ACS) (AceCS) Length = 670 Score = 32.7 bits (73), Expect = 0.23 Identities = 12/35 (34%), Positives = 21/35 (60%) Frame = +1 Query: 166 GQAIKHSLGQSHPVRLVPYNPDFLDESVLWTESRD 270 G +++ + SH R+ P PD ++E + WT+ RD Sbjct: 221 GHSVEKCIVVSHLKRVTPCQPDHVEEEIPWTDDRD 255
>SPD2_NEPCL (P46804) Spidroin 2 (Dragline silk fibroin 2) (Fragment)| Length = 627 Score = 32.7 bits (73), Expect = 0.23 Identities = 19/51 (37%), Positives = 23/51 (45%) Frame = +3 Query: 117 QGRGGLPRLRHREQGHWPGHQALPRPVPPCASGAVQPGLSGRVGAVDGEQG 269 QG GG + G+ PG Q L P A+ A PG G G G+QG Sbjct: 218 QGPGGYGPGQQGPGGYGPGQQGLSGPGSAAAAAAAGPGQQGPGGYGPGQQG 268
>SYK_HAEDU (Q7VLU5) Lysyl-tRNA synthetase (EC 6.1.1.6) (Lysine--tRNA ligase)| (LysRS) Length = 498 Score = 32.0 bits (71), Expect = 0.39 Identities = 22/83 (26%), Positives = 37/83 (44%), Gaps = 11/83 (13%) Frame = +1 Query: 115 IKDEEGYPAFAIVNKATGQAIKHSLGQ-----SHPVRLVPY------NPDFLDESVLWTE 261 I+ ++ + A+VN + +H L Q +HP + P NP+ D L+ Sbjct: 354 IEVQKSWGLGAVVNAIFEEVAEHQLIQPTFLMAHPAEISPLARRNDENPEVTDRFELFIG 413 Query: 262 SRDVGNGFRCVRMVNNIYLNFDA 330 R++GNGF + + FDA Sbjct: 414 GREIGNGFSELNDAEDQAARFDA 436
>AGO2_DROME (Q9VUQ5) Argonaute 2 protein| Length = 1214 Score = 30.4 bits (67), Expect = 1.1 Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 5/60 (8%) Frame = +3 Query: 90 QGHEVEHQHQGRGGLPRL-----RHREQGHWPGHQALPRPVPPCASGAVQPGLSGRVGAV 254 QG E +Q + G P +++ +G QA P P+PP +G+++ G G+ G V Sbjct: 357 QGQEGGYQQRPPGQQPNQTQSQGQYQSRGPPQQQQAAPLPLPPQPAGSIKRGTIGKPGQV 416
>SPR2F_MOUSE (O70557) Small proline-rich protein 2F| Length = 76 Score = 30.4 bits (67), Expect = 1.1 Identities = 11/23 (47%), Positives = 12/23 (52%) Frame = -2 Query: 280 RCPRPCSPSTAPTRPESPGCTAP 212 +CP PCSPS P P C P Sbjct: 22 KCPEPCSPSVCPEPCPPPKCPEP 44
>RELA_STRAT (O85709) GTP pyrophosphokinase (EC 2.7.6.5) (ATP:GTP| 3'-pyrophosphotransferase) (ppGpp synthetase I) ((P)ppGpp synthetase) Length = 841 Score = 30.0 bits (66), Expect = 1.5 Identities = 24/62 (38%), Positives = 25/62 (40%), Gaps = 5/62 (8%) Frame = +3 Query: 81 ALDQGHEVEHQHQGRGGLPRLRHREQGHWPGHQALPRPVPPCASGAVQP-----GLSGRV 245 A D G VEH P R R + P PRP PP A A QP G S RV Sbjct: 27 AQDGGGPVEHDRSAPADKPAERTRPK---PAPPERPRPPPPRARAAGQPAARSGGSSNRV 83 Query: 246 GA 251 A Sbjct: 84 RA 85
>IGHG3_HUMAN (P01860) Ig gamma-3 chain C region (Heavy chain disease protein)| (HDC) Length = 290 Score = 29.6 bits (65), Expect = 1.9 Identities = 12/27 (44%), Positives = 14/27 (51%) Frame = -2 Query: 277 CPRPCSPSTAPTRPESPGCTAPDAQGG 197 CPR P + T P P C AP+ GG Sbjct: 54 CPRCPEPKSCDTPPPCPRCPAPELLGG 80
>MUCDL_HUMAN (Q9HBB8) Mucin and cadherin-like protein precursor| (Mu-protocadherin) Length = 845 Score = 29.6 bits (65), Expect = 1.9 Identities = 15/36 (41%), Positives = 16/36 (44%) Frame = -2 Query: 301 PCART*SRCPRPCSPSTAPTRPESPGCTAPDAQGGT 194 P T S PRP PS P+ S G T P GT Sbjct: 473 PWTSTTSEVPRPPEPSQGPSTTSSGGGTGPHPPSGT 508
>RL21_ARCFU (O28743) 50S ribosomal protein L21e| Length = 97 Score = 29.6 bits (65), Expect = 1.9 Identities = 14/36 (38%), Positives = 18/36 (50%) Frame = +3 Query: 198 PPCASGAVQPGLSGRVGAVDGEQGRGQRLQVRAHGE 305 P G P GR G V G++GR +QVR G+ Sbjct: 46 PASQKGMPHPRFQGRTGVVIGQRGRAYLVQVRDGGK 81
>Y4762_ARATH (Q8RY73) Protein At4g17620, chloroplast precursor| Length = 544 Score = 29.6 bits (65), Expect = 1.9 Identities = 21/56 (37%), Positives = 26/56 (46%) Frame = +3 Query: 75 LPALDQGHEVEHQHQGRGGLPRLRHREQGHWPGHQALPRPVPPCASGAVQPGLSGR 242 +P L G ++ H GRGG+ R R PG LPRP P G + G GR Sbjct: 135 IPVLPAGWSNDN-HGGRGGMGRGRWSNGRGGPG--LLPRPGPYPGRGGNRGGFGGR 187
>ZN646_HUMAN (O15015) Zinc finger protein 646| Length = 1829 Score = 29.6 bits (65), Expect = 1.9 Identities = 14/36 (38%), Positives = 17/36 (47%) Frame = +3 Query: 132 LPRLRHREQGHWPGHQALPRPVPPCASGAVQPGLSG 239 LP LR Q H PG +P C G + PG +G Sbjct: 860 LPALRSHFQNHRPGEATSAQPFLCCLCGMIFPGRAG 895
>MUC1_HUMAN (P15941) Mucin-1 precursor (MUC-1) (Polymorphic epithelial mucin)| (PEM) (PEMT) (Episialin) (Tumor-associated mucin) (Carcinoma-associated mucin) (Tumor-associated epithelial membrane antigen) (EMA) (H23AG) (Peanut-reactive urinary mucin) (PUM) Length = 1255 Score = 25.0 bits (53), Expect(2) = 1.9 Identities = 17/36 (47%), Positives = 18/36 (50%), Gaps = 10/36 (27%) Frame = -2 Query: 271 RPCSPSTAP----------TRPESPGCTAPDAQGGT 194 RP STAP TRP +PG TAP A G T Sbjct: 905 RPAPGSTAPPAHGVTSAPDTRP-APGSTAPPAHGVT 939 Score = 23.1 bits (48), Expect(2) = 1.9 Identities = 11/21 (52%), Positives = 12/21 (57%) Frame = -3 Query: 207 HRVGLAEGVLDGLASGLVHDG 145 H V A G G AS LVH+G Sbjct: 956 HNVTSASGSASGSASTLVHNG 976
>M3K12_HUMAN (Q12852) Mitogen-activated protein kinase kinase kinase 12 (EC| 2.7.11.25) (Mixed lineage kinase) (Leucine-zipper protein kinase) (ZPK) (Dual leucine zipper bearing kinase) (DLK) (MAPK-upstream kinase) (MUK) Length = 859 Score = 28.9 bits (63), Expect = 3.3 Identities = 11/26 (42%), Positives = 15/26 (57%) Frame = -2 Query: 274 PRPCSPSTAPTRPESPGCTAPDAQGG 197 P P T P+ +PG T+PD+ GG Sbjct: 635 PPPARGDTPPSEGSAPGSTSPDSPGG 660
>LCE2B_HUMAN (O14633) Late cornified envelope protein 2B (Late envelope protein| 10) (Small proline-rich-like epidermal differentiation complex protein 1B) (Skin-specific protein Xp5) Length = 110 Score = 28.9 bits (63), Expect = 3.3 Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 1/34 (2%) Frame = -2 Query: 280 RCPRPCSPSTAP-TRPESPGCTAPDAQGGTGRGS 182 +CP PCSP+ + P S GC P + G G+ Sbjct: 35 QCPAPCSPAVSSCCGPISGGCCGPSSGGCCNSGA 68
>SYK_PASMU (P57822) Lysyl-tRNA synthetase (EC 6.1.1.6) (Lysine--tRNA ligase)| (LysRS) Length = 501 Score = 28.9 bits (63), Expect = 3.3 Identities = 21/83 (25%), Positives = 37/83 (44%), Gaps = 11/83 (13%) Frame = +1 Query: 115 IKDEEGYPAFAIVNKATGQAIKHSLGQ-----SHPVRLVPY------NPDFLDESVLWTE 261 I+ ++ + ++VN + +H L Q +HP + P NP+ D L+ Sbjct: 357 IEVQKSWGLGSLVNVIFEEVAEHHLIQPTFLMAHPAEISPLARRNDENPEVTDRFELFIG 416 Query: 262 SRDVGNGFRCVRMVNNIYLNFDA 330 R++GNGF + + FDA Sbjct: 417 GREIGNGFSELNDAEDQNERFDA 439
>VE4_HPV5B (P26550) Probable protein E4| Length = 245 Score = 28.9 bits (63), Expect = 3.3 Identities = 16/49 (32%), Positives = 22/49 (44%) Frame = +3 Query: 159 GHWPGHQALPRPVPPCASGAVQPGLSGRVGAVDGEQGRGQRLQVRAHGE 305 G PG P+P P P S R+G + ++ G+ QV A GE Sbjct: 88 GLGPGRAPSPKPTPLGPPPGPGPRRSARLGPLQADRDPGEGPQVPAEGE 136
>E75BC_DROME (P17671) Ecdysone-induced protein 75B isoforms C/D (E75-A)| Length = 1199 Score = 28.5 bits (62), Expect = 4.3 Identities = 15/36 (41%), Positives = 17/36 (47%) Frame = -2 Query: 295 ART*SRCPRPCSPSTAPTRPESPGCTAPDAQGGTGR 188 A+T C + AP PE P TAP G TGR Sbjct: 11 AKTSVICSTVSASMLAPPAPEQPSTTAPPILGVTGR 46
>LOZEN_DROME (Q9W349) Protein lozenge| Length = 826 Score = 28.5 bits (62), Expect = 4.3 Identities = 15/52 (28%), Positives = 21/52 (40%) Frame = +3 Query: 147 HREQGHWPGHQALPRPVPPCASGAVQPGLSGRVGAVDGEQGRGQRLQVRAHG 302 H H ALP P PP A+ V G+ G + G G + + +G Sbjct: 558 HHAHAHLQHQMALPPPPPPPAAAPVSVGVGGNGATMGMGMGVGVGMGMNHYG 609
>DCUP_BRUSU (Q8FY24) Uroporphyrinogen decarboxylase (EC 4.1.1.37) (URO-D) (UPD)| Length = 341 Score = 28.5 bits (62), Expect = 4.3 Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 3/52 (5%) Frame = -3 Query: 261 LRPQHRLVQKVRVVRHQTHRVGLAEGVLDGLASGLVHDG---EGGVALLVLD 115 +RP R+VQKVR V Q +G +G +G+++ G + GV +L LD Sbjct: 218 IRPVARIVQKVRAVYPQARIIGFPKG------AGMLYAGYREKTGVDMLGLD 263
>DCUP_BRUME (Q8YJT1) Uroporphyrinogen decarboxylase (EC 4.1.1.37) (URO-D) (UPD)| Length = 341 Score = 28.5 bits (62), Expect = 4.3 Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 3/52 (5%) Frame = -3 Query: 261 LRPQHRLVQKVRVVRHQTHRVGLAEGVLDGLASGLVHDG---EGGVALLVLD 115 +RP R+VQKVR V Q +G +G +G+++ G + GV +L LD Sbjct: 218 IRPVARIVQKVRAVYPQARIIGFPKG------AGMLYAGYREKTGVDMLGLD 263
>RLUB_XANAC (Q8PK58) Ribosomal large subunit pseudouridine synthase B (EC| 5.4.99.-) (rRNA-uridine isomerase B) (rRNA pseudouridylate synthase B) Length = 550 Score = 28.5 bits (62), Expect = 4.3 Identities = 16/43 (37%), Positives = 17/43 (39%) Frame = +3 Query: 147 HREQGHWPGHQALPRPVPPCASGAVQPGLSGRVGAVDGEQGRG 275 HR G RP G +PG G VGA G GRG Sbjct: 400 HRNAGPSGPGTGQARPYAKKGPGGARPGTGGPVGARSGGPGRG 442
>ADRB3_BOVIN (P46626) Beta-3 adrenergic receptor (Beta-3 adrenoceptor) (Beta-3| adrenoreceptor) Length = 405 Score = 28.5 bits (62), Expect = 4.3 Identities = 20/58 (34%), Positives = 26/58 (44%), Gaps = 4/58 (6%) Frame = +3 Query: 138 RLRHREQGHWPGHQALPRPVPPCASGAVQPGLSGRVGAVDGEQGRGQR----LQVRAH 299 RL RE G +P P PP S + PGL+G + G G+R L +R H Sbjct: 236 RLLRRELGRFP-----PEESPPAPSRSGSPGLAGPCASPAGVPSYGRRPARLLPLREH 288
>SPR2H_MOUSE (O70559) Small proline-rich protein 2H| Length = 108 Score = 28.5 bits (62), Expect = 4.3 Identities = 10/23 (43%), Positives = 11/23 (47%) Frame = -2 Query: 280 RCPRPCSPSTAPTRPESPGCTAP 212 +CP PC P P P CT P Sbjct: 58 KCPEPCPPPKCPEPCPPPKCTEP 80 Score = 28.1 bits (61), Expect = 5.6 Identities = 10/23 (43%), Positives = 11/23 (47%) Frame = -2 Query: 280 RCPRPCSPSTAPTRPESPGCTAP 212 +CP PC P P P CT P Sbjct: 22 QCPEPCPPPKCPEPCPPPKCTEP 44
>HGFA_CANFA (Q6QNF4) Hepatocyte growth factor activator precursor (EC 3.4.21.-)| (HGF activator) (HGFA) [Contains: Hepatocyte growth factor activator short chain; Hepatocyte growth factor activator long chain] Length = 654 Score = 28.1 bits (61), Expect = 5.6 Identities = 14/28 (50%), Positives = 18/28 (64%) Frame = -2 Query: 268 PCSPSTAPTRPESPGCTAPDAQGGTGRG 185 P P T+ T P +P +AP+AQG GRG Sbjct: 54 PMIPVTSVT-PVTPATSAPEAQGPRGRG 80
>PIGR_BOVIN (P81265) Polymeric-immunoglobulin receptor precursor (Poly-Ig| receptor) (PIGR) [Contains: Secretory component] Length = 757 Score = 28.1 bits (61), Expect = 5.6 Identities = 21/85 (24%), Positives = 34/85 (40%), Gaps = 1/85 (1%) Frame = +1 Query: 58 ANPKDDYQHWIKDMRWSTSIKDEEGYPAF-AIVNKATGQAIKHSLGQSHPVRLVPYNPDF 234 A P+ + Q W + +E PA ++V G ++ S PYNP Sbjct: 326 AQPEGEPQDGWPVQAWQLFVNEETAIPASPSVVKGVRGGSVTVSC---------PYNPKD 376 Query: 235 LDESVLWTESRDVGNGFRCVRMVNN 309 + + W + NG RC R+V + Sbjct: 377 ANSAKYWCHWEEAQNG-RCPRLVES 400
>M3K12_RAT (Q63796) Mitogen-activated protein kinase kinase kinase 12 (EC| 2.7.11.25) (Mixed lineage kinase) (Leucine-zipper protein kinase) (ZPK) (Dual leucine zipper bearing kinase) (DLK) (MAPK-upstream kinase) (MUK) Length = 888 Score = 28.1 bits (61), Expect = 5.6 Identities = 11/26 (42%), Positives = 15/26 (57%) Frame = -2 Query: 274 PRPCSPSTAPTRPESPGCTAPDAQGG 197 P P T P+ +PG T+PD+ GG Sbjct: 668 PPPPQGDTPPSEGSAPGSTSPDSPGG 693
>M3K12_MOUSE (Q60700) Mitogen-activated protein kinase kinase kinase 12 (EC| 2.7.11.25) (Mixed lineage kinase) (Leucine-zipper protein kinase) (ZPK) (Dual leucine zipper bearing kinase) (DLK) (MAPK-upstream kinase) (MUK) Length = 888 Score = 28.1 bits (61), Expect = 5.6 Identities = 11/26 (42%), Positives = 15/26 (57%) Frame = -2 Query: 274 PRPCSPSTAPTRPESPGCTAPDAQGG 197 P P T P+ +PG T+PD+ GG Sbjct: 668 PPPPQGDTPPSEGSAPGSTSPDSPGG 693
>SPR2D_HUMAN (P22532) Small proline-rich protein 2D (SPR-2D) (Small proline-rich| protein II) (SPR-II) Length = 72 Score = 28.1 bits (61), Expect = 5.6 Identities = 10/23 (43%), Positives = 11/23 (47%) Frame = -2 Query: 280 RCPRPCSPSTAPTRPESPGCTAP 212 +CP PC P P SP C P Sbjct: 22 KCPEPCPPPKCPEPCPSPKCPQP 44
>SYV_MYCLE (Q9CBY7) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 886 Score = 28.1 bits (61), Expect = 5.6 Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 1/31 (3%) Frame = +1 Query: 25 SVRNGKXVLAPANPKDDYQHWIKDMR-WSTS 114 +VRNG V+ PA+ + + W+ DMR W S Sbjct: 384 AVRNGDTVIHPASMESRWFAWVDDMRDWCIS 414
>NOTC3_HUMAN (Q9UM47) Neurogenic locus notch homolog protein 3 precursor (Notch| 3) [Contains: Notch 3 extracellular truncation; Notch 3 intracellular domain] Length = 2321 Score = 28.1 bits (61), Expect = 5.6 Identities = 14/35 (40%), Positives = 14/35 (40%), Gaps = 1/35 (2%) Frame = -2 Query: 298 CART*SRC-PRPCSPSTAPTRPESPGCTAPDAQGG 197 CAR C PC P T S CT P GG Sbjct: 884 CARDVDECLSNPCGPGTCTDHVASFTCTCPPGYGG 918
>LIPA_PSEFL (P26504) Lipase precursor (EC 3.1.1.3) (Triacylglycerol lipase)| Length = 449 Score = 28.1 bits (61), Expect = 5.6 Identities = 13/26 (50%), Positives = 15/26 (57%), Gaps = 2/26 (7%) Frame = -2 Query: 79 GSRPWGWPARAPPC--RCARTWRSWG 8 G +P GW +RAP CA T R WG Sbjct: 420 GYQPTGWCSRAPTAAPTCATTRRPWG 445
>STNB_DROME (Q24212) Protein stoned-B (StonedB) (Stn-B)| Length = 1262 Score = 28.1 bits (61), Expect = 5.6 Identities = 12/21 (57%), Positives = 12/21 (57%) Frame = -2 Query: 274 PRPCSPSTAPTRPESPGCTAP 212 PRP P AP RP PG AP Sbjct: 236 PRPPPPRPAPPRPAPPGQAAP 256
>RLUB_XANCP (Q8P8M6) Ribosomal large subunit pseudouridine synthase B (EC| 5.4.99.-) (rRNA-uridine isomerase B) (rRNA pseudouridylate synthase B) Length = 492 Score = 28.1 bits (61), Expect = 5.6 Identities = 19/57 (33%), Positives = 23/57 (40%), Gaps = 6/57 (10%) Frame = +3 Query: 147 HREQGHWPGHQALPRPVPPCASGAVQPGLSGR-VGAVDGE-----QGRGQRLQVRAH 299 HR G PRP G +PG G+ GA G+ QG+GQR H Sbjct: 400 HRNAGPGGAGTGQPRPYAKKGPGGARPGAGGQGRGAAGGQGQSQGQGQGQRKHPYGH 456
>DNAJ_BRAJA (P94319) Chaperone protein dnaJ| Length = 377 Score = 28.1 bits (61), Expect = 5.6 Identities = 14/32 (43%), Positives = 18/32 (56%) Frame = -3 Query: 228 RVVRHQTHRVGLAEGVLDGLASGLVHDGEGGV 133 RV R +T V + +GV DG L +GE GV Sbjct: 209 RVTRERTLSVNIPQGVEDGTRIRLAGEGEAGV 240
>CAC1C_RAT (P22002) Voltage-dependent L-type calcium channel alpha-1C subunit| (Voltage-gated calcium channel alpha subunit Cav1.2) (Calcium channel, L type, alpha-1 polypeptide, isoform 1, cardiac muscle) (RAT brain class C) (RBC) Length = 2169 Score = 28.1 bits (61), Expect = 5.6 Identities = 20/49 (40%), Positives = 20/49 (40%) Frame = +3 Query: 96 HEVEHQHQGRGGLPRLRHREQGHWPGHQALPRPVPPCASGAVQPGLSGR 242 H V HQ GL L R H P PRP PP V PG GR Sbjct: 1952 HLVHHQALAVAGLSPLLQRS--HSPSTFPRPRPTPP-----VTPGSRGR 1993
>ELN_RAT (Q99372) Elastin precursor (Tropoelastin)| Length = 870 Score = 28.1 bits (61), Expect = 5.6 Identities = 21/50 (42%), Positives = 21/50 (42%) Frame = +3 Query: 120 GRGGLPRLRHREQGHWPGHQALPRPVPPCASGAVQPGLSGRVGAVDGEQG 269 G GG L G PG ALP VP GAV L G V V G G Sbjct: 490 GAGGAGTLGGLVPGAVPG--ALPGAVPGALPGAVPGALPGAVPGVPGTGG 537
>TOM40_RAT (Q75Q40) Probable mitochondrial import receptor subunit TOM40| homolog (Translocase of outer membrane 40 kDa subunit homolog) (38 kDa mitochondrial outer membrane protein) (OM38) Length = 361 Score = 27.7 bits (60), Expect = 7.4 Identities = 13/31 (41%), Positives = 13/31 (41%) Frame = -2 Query: 274 PRPCSPSTAPTRPESPGCTAPDAQGGTGRGS 182 P P P P PG T P GG G GS Sbjct: 18 PTPSLVGLPPPPPSPPGFTLPPLGGGLGTGS 48
>SEM5A_MOUSE (Q62217) Semaphorin-5A precursor (Semaphorin F) (Sema F)| Length = 1077 Score = 27.7 bits (60), Expect = 7.4 Identities = 19/51 (37%), Positives = 25/51 (49%) Frame = +1 Query: 127 EGYPAFAIVNKATGQAIKHSLGQSHPVRLVPYNPDFLDESVLWTESRDVGN 279 E Y A A+ AI SLG P+R YN +L+E + S D+GN Sbjct: 178 ELYAATAMDFPGRDPAIYRSLGTLPPLRTAQYNSKWLNEP-NFVSSYDIGN 227
>APTX_DROME (Q8MSG8) Protein aprataxin-like| Length = 662 Score = 27.7 bits (60), Expect = 7.4 Identities = 18/47 (38%), Positives = 23/47 (48%), Gaps = 3/47 (6%) Frame = +3 Query: 147 HREQGHW--PGHQALPRPVPPCASGAVQ-PGLSGRVGAVDGEQGRGQ 278 H++Q + PG A +P PP SG Q P S G G G+GQ Sbjct: 536 HQQQNRFRPPGFNACRQPYPPYHSGHQQFPNASSVGGGQTGLPGQGQ 582
>IF2_LEIXX (Q6AG49) Translation initiation factor IF-2| Length = 916 Score = 27.7 bits (60), Expect = 7.4 Identities = 17/39 (43%), Positives = 18/39 (46%) Frame = -2 Query: 283 SRCPRPCSPSTAPTRPESPGCTAPDAQGGTGRGSA*WPG 167 S PRP AP RP SP AP GG +G PG Sbjct: 195 SNIPRP-----APPRPGSPRIGAPRPGGGQRQGGGGRPG 228
>TRPG_SERMA (P00900) Anthranilate synthase component II (EC 4.1.3.27)| (Glutamine amido-transferase) Length = 192 Score = 27.7 bits (60), Expect = 7.4 Identities = 12/22 (54%), Positives = 15/22 (68%) Frame = -3 Query: 204 RVGLAEGVLDGLASGLVHDGEG 139 +VG A +L G AS + HDGEG Sbjct: 96 QVGQAGEILHGKASAIAHDGEG 117
>ZDHC1_MOUSE (Q8R0N9) Probable palmitoyltransferase ZDHHC1 (EC 2.3.1.-) (Zinc| finger DHHC domain-containing protein 1) (DHHC-1) Length = 484 Score = 27.7 bits (60), Expect = 7.4 Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 4/43 (9%) Frame = -1 Query: 269 SLLSVHSTDSSRKSGLYG--TRRTGWDWPRECL--MAWPVALF 153 S+ + S DS L G +RR GW WP L +AW + LF Sbjct: 16 SVWTAPSQDSGPSPELQGQRSRRNGWSWPPHPLQIVAWLLYLF 58
>WASP_MOUSE (P70315) Wiskott-Aldrich syndrome protein homolog (WASp)| Length = 520 Score = 27.7 bits (60), Expect = 7.4 Identities = 20/57 (35%), Positives = 25/57 (43%) Frame = +3 Query: 117 QGRGGLPRLRHREQGHWPGHQALPRPVPPCASGAVQPGLSGRVGAVDGEQGRGQRLQ 287 + +GGL +R + P LP P PPC G G G G G G GQ L+ Sbjct: 297 EDQGGLEAVRQEMRRQEP----LPPPPPPCRGG----GGGGGGGGGGGGGGGGQPLR 345
>GALT6_BOVIN (Q5EA41) Polypeptide N-acetylgalactosaminyltransferase 6 (EC| 2.4.1.41) (Protein-UDP acetylgalactosaminyltransferase 6) (UDP-GalNAc:polypeptide N-acetylgalactosaminyltransferase 6) (Polypeptide GalNAc transferase 6) (GalNAc-T6) (pp-GaNTase 6) Length = 622 Score = 27.7 bits (60), Expect = 7.4 Identities = 9/23 (39%), Positives = 16/23 (69%) Frame = +1 Query: 22 MSVRNGKXVLAPANPKDDYQHWI 90 ++ ++ K V+A NP D +QHW+ Sbjct: 598 LTSKDKKPVMATCNPSDPHQHWL 620
>GSLG1_CHICK (Q02391) Golgi apparatus protein 1 precursor (Cysteine-rich| fibroblast growth factor receptor) Length = 1142 Score = 27.7 bits (60), Expect = 7.4 Identities = 18/48 (37%), Positives = 19/48 (39%), Gaps = 2/48 (4%) Frame = -2 Query: 301 PCART*SRCPRPC--SPSTAPTRPESPGCTAPDAQGGTGRGSA*WPGQ 164 PC R SRCP P RP G A Q G G +A P Q Sbjct: 3 PCGRVRSRCPGPALLLLLALAARPALAGPPAAALQAGPGLNAAGQPAQ 50
>NOTC3_RAT (Q9R172) Neurogenic locus notch homolog protein 3 precursor (Notch| 3) [Contains: Notch 3 extracellular truncation; Notch 3 intracellular domain] Length = 2319 Score = 27.7 bits (60), Expect = 7.4 Identities = 14/35 (40%), Positives = 14/35 (40%), Gaps = 1/35 (2%) Frame = -2 Query: 298 CART*SRC-PRPCSPSTAPTRPESPGCTAPDAQGG 197 CAR C PC P T S CT P GG Sbjct: 886 CARDVDECLSSPCGPGTCTDHVASFTCTCPPGYGG 920
>FOXGB_HUMAN (P55315) Forkhead box protein G1B (Forkhead-related protein FKHL1)| (Transcription factor BF-1) (Brain factor 1) (BF1) (HFK1) Length = 477 Score = 23.9 bits (50), Expect(2) = 9.3 Identities = 12/47 (25%), Positives = 15/47 (31%) Frame = +3 Query: 87 DQGHEVEHQHQGRGGLPRLRHREQGHWPGHQALPRPVPPCASGAVQP 227 + H H H H H P+P PP A+ QP Sbjct: 30 NDNHHASHGHHNSHHPQHHHHHHHHHHHPPPPAPQPPPPRAAQQQQP 76 Score = 21.9 bits (45), Expect(2) = 9.3 Identities = 10/23 (43%), Positives = 13/23 (56%) Frame = +3 Query: 207 ASGAVQPGLSGRVGAVDGEQGRG 275 A G +PG G VG + E+G G Sbjct: 116 AGGCCRPGELGPVGPDEKEKGAG 138
>LCE2D_HUMAN (Q5TA82) Late cornified envelope protein 2D (Late envelope protein| 12) (Small proline-rich-like epidermal differentiation complex protein 1A) Length = 110 Score = 27.3 bits (59), Expect = 9.6 Identities = 12/33 (36%), Positives = 16/33 (48%), Gaps = 1/33 (3%) Frame = -2 Query: 280 RCPRPCSPSTAP-TRPESPGCTAPDAQGGTGRG 185 +CP PCSP+ + P S C P + G G Sbjct: 35 QCPAPCSPAVSSCCGPSSGSCCGPSSGGCCSSG 67
>DTX_DROME (Q23985) Protein deltex| Length = 738 Score = 27.3 bits (59), Expect = 9.6 Identities = 13/37 (35%), Positives = 18/37 (48%) Frame = +3 Query: 90 QGHEVEHQHQGRGGLPRLRHREQGHWPGHQALPRPVP 200 Q + HQHQ + + +H+ Q H HQ PR P Sbjct: 274 QQQQHHHQHQQQQHQQQQQHQMQHHQIHHQTAPRKPP 310
>SEM5B_MOUSE (Q60519) Semaphorin-5B precursor (Semaphorin G) (Sema G)| Length = 1093 Score = 27.3 bits (59), Expect = 9.6 Identities = 17/48 (35%), Positives = 23/48 (47%), Gaps = 2/48 (4%) Frame = +1 Query: 106 STSIKDEEG--YPAFAIVNKATGQAIKHSLGQSHPVRLVPYNPDFLDE 243 ST++ +G Y A I AI SLG P+R YN +L+E Sbjct: 179 STAVISSQGELYAATVIDFSGRDPAIYRSLGSGPPLRTAQYNSKWLNE 226
>SEM5B_HUMAN (Q9P283) Semaphorin-5B precursor| Length = 1093 Score = 27.3 bits (59), Expect = 9.6 Identities = 17/48 (35%), Positives = 23/48 (47%), Gaps = 2/48 (4%) Frame = +1 Query: 106 STSIKDEEG--YPAFAIVNKATGQAIKHSLGQSHPVRLVPYNPDFLDE 243 ST++ +G Y A I AI SLG P+R YN +L+E Sbjct: 179 STAVISSQGELYAATVIDFSGRDPAIYRSLGSGPPLRTAQYNSKWLNE 226
>AOX2_ARATH (O22049) Alternative oxidase 2, mitochondrial precursor (EC| 1.-.-.-) Length = 353 Score = 27.3 bits (59), Expect = 9.6 Identities = 9/16 (56%), Positives = 10/16 (62%) Frame = -1 Query: 215 TRRTGWDWPRECLMAW 168 TR+ G DWP C M W Sbjct: 115 TRKDGSDWPWNCFMPW 130
>SYV_NOCFA (Q5Z048) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 893 Score = 27.3 bits (59), Expect = 9.6 Identities = 24/81 (29%), Positives = 40/81 (49%), Gaps = 4/81 (4%) Frame = +1 Query: 25 SVRNGKXVLAPANPKDDYQHWIKDMR-WSTSIKDEEGYPAFAIVNKATGQAIKHSLGQSH 201 +VRNG+ V+ PA+ + + W+ +M W+ S + G+ I G+ + G++ Sbjct: 388 AVRNGQVVIHPASQEPRWFEWVDNMHDWTISRQLWWGH-RIPIWYGPDGEVVCLGPGETP 446 Query: 202 PVRLVPYNPDFLD---ESVLW 255 P V +PD LD S LW Sbjct: 447 PEGWV-QDPDVLDTWFSSGLW 466 Score = 27.3 bits (59), Expect = 9.6 Identities = 22/91 (24%), Positives = 34/91 (37%) Frame = +1 Query: 16 YAMSVRNGKXVLAPANPKDDYQHWIKDMRWSTSIKDEEGYPAFAIVNKATGQAIKHSLGQ 195 Y SV + + P P+ Q W+K + KA G A+++ Sbjct: 352 YIHSVGHSERTGEPIEPRLSMQWWVK----------------VEALAKAAGDAVRNGQVV 395 Query: 196 SHPVRLVPYNPDFLDESVLWTESRDVGNGFR 288 HP P +++D WT SR + G R Sbjct: 396 IHPASQEPRWFEWVDNMHDWTISRQLWWGHR 426
>MCSP_MOUSE (P15265) Sperm mitochondrial-associated cysteine-rich protein| Length = 143 Score = 27.3 bits (59), Expect = 9.6 Identities = 12/28 (42%), Positives = 14/28 (50%), Gaps = 1/28 (3%) Frame = -2 Query: 301 PCART*SRCP-RPCSPSTAPTRPESPGC 221 PC CP +PC P P P+SP C Sbjct: 13 PCCPPKPCCPPKPCCPQKPPCCPKSPCC 40
>IF2_MYCTU (P65131) Translation initiation factor IF-2| Length = 900 Score = 27.3 bits (59), Expect = 9.6 Identities = 15/33 (45%), Positives = 18/33 (54%) Frame = -2 Query: 283 SRCPRPCSPSTAPTRPESPGCTAPDAQGGTGRG 185 +R PRP +P RP +PG DA GG RG Sbjct: 203 ARPPRPGAPRPGG-RPGAPGAGRSDAGGGNYRG 234
>IF2_MYCBO (P65132) Translation initiation factor IF-2| Length = 900 Score = 27.3 bits (59), Expect = 9.6 Identities = 15/33 (45%), Positives = 18/33 (54%) Frame = -2 Query: 283 SRCPRPCSPSTAPTRPESPGCTAPDAQGGTGRG 185 +R PRP +P RP +PG DA GG RG Sbjct: 203 ARPPRPGAPRPGG-RPGAPGAGRSDAGGGNYRG 234
>TECTA_CHICK (Q9YH85) Alpha-tectorin precursor| Length = 2120 Score = 27.3 bits (59), Expect = 9.6 Identities = 14/28 (50%), Positives = 15/28 (53%) Frame = -2 Query: 283 SRCPRPCSPSTAPTRPESPGCTAPDAQG 200 S CP CS TAP R CTAP +G Sbjct: 588 SGCPATCSDLTAPLR-----CTAPCPEG 610
>GALT6_MOUSE (Q8C7U7) Polypeptide N-acetylgalactosaminyltransferase 6 (EC| 2.4.1.41) (Protein-UDP acetylgalactosaminyltransferase 6) (UDP-GalNAc:polypeptide N-acetylgalactosaminyltransferase 6) (Polypeptide GalNAc transferase 6) (GalNAc-T6) (pp-GaNTase 6) Length = 622 Score = 27.3 bits (59), Expect = 9.6 Identities = 9/23 (39%), Positives = 16/23 (69%) Frame = +1 Query: 22 MSVRNGKXVLAPANPKDDYQHWI 90 ++ ++ K +AP NP+D YQ W+ Sbjct: 598 LTSQDKKPAMAPCNPRDPYQLWL 620
>CO4A1_CAEEL (P17139) Collagen alpha-1(IV) chain precursor| Length = 1759 Score = 27.3 bits (59), Expect = 9.6 Identities = 18/40 (45%), Positives = 22/40 (55%), Gaps = 6/40 (15%) Frame = +3 Query: 168 PGHQALPRPV----PPCASGAV-QPGLSGRVGAVD-GEQG 269 PGH LP PV P A GA QPG+ G G + G++G Sbjct: 387 PGHDGLPGPVGPRGPVGAPGAPGQPGIDGMPGYTEKGDRG 426
>RELB_CHICK (P51509) Transcription factor RelB homolog| Length = 549 Score = 27.3 bits (59), Expect = 9.6 Identities = 13/33 (39%), Positives = 16/33 (48%) Frame = -2 Query: 280 RCPRPCSPSTAPTRPESPGCTAPDAQGGTGRGS 182 R P P T PT P C+ ++GG GR S Sbjct: 497 RTPPPTETPTPPTASWGPICSQGTSEGGGGRTS 529
>COJA1_HUMAN (Q14993) Collagen alpha-1(XIX) chain precursor (Collagen alpha-1(Y)| chain) Length = 1142 Score = 27.3 bits (59), Expect = 9.6 Identities = 25/79 (31%), Positives = 32/79 (40%), Gaps = 4/79 (5%) Frame = +3 Query: 78 PALDQGHEVEHQHQGRGGLPRLRHREQGHWPGHQALPRPV----PPCASGAVQPGLSGRV 245 P D G EH G+ G+ + + G G LP P PP S +PGL G Sbjct: 538 PPGDVGLPGEHGIPGKQGI-KGEKGDPGGIIGPPGLPGPKGEAGPPGKSLPGEPGLDGNP 596 Query: 246 GAVDGEQGRGQRLQVRAHG 302 GA +G+R HG Sbjct: 597 GAPGPRGPKGERGLPGVHG 615 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 41,296,064 Number of Sequences: 219361 Number of extensions: 828401 Number of successful extensions: 4633 Number of sequences better than 10.0: 62 Number of HSP's better than 10.0 without gapping: 4251 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4618 length of database: 80,573,946 effective HSP length: 89 effective length of database: 61,050,817 effective search space used: 1465219608 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
