>RL21_ARATH (Q43291) 60S ribosomal protein L21|
          Length = 164

 Score = 84.0 bits (206), Expect = 1e-16
 Identities = 37/42 (88%), Positives = 42/42 (100%)
 Frame = +1

Query: 1   HGLRSRTRDLFARPFRKKGYIPLTTYLRTYKVGEYVDVKVNG 126
           HG+R+RTRDLFARPFRKKGYIPL+TYLRT+KVG+YVDVKVNG
Sbjct: 5   HGVRARTRDLFARPFRKKGYIPLSTYLRTFKVGDYVDVKVNG 46

>RL21A_YEAST (Q02753) 60S ribosomal protein L21-A|
          Length = 160

 Score = 58.9 bits (141), Expect = 4e-09
 Identities = 26/42 (61%), Positives = 32/42 (76%)
 Frame = +1

Query: 1   HGLRSRTRDLFARPFRKKGYIPLTTYLRTYKVGEYVDVKVNG 126
           HG RSRTR +F R FRK G + L+TYL+ YKVG+ VD+K NG
Sbjct: 5   HGYRSRTRYMFQRDFRKHGAVHLSTYLKVYKVGDIVDIKANG 46

>RL21B_YEAST (Q12672) 60S ribosomal protein L21-B|
          Length = 160

 Score = 57.8 bits (138), Expect = 8e-09
 Identities = 25/42 (59%), Positives = 32/42 (76%)
 Frame = +1

Query: 1   HGLRSRTRDLFARPFRKKGYIPLTTYLRTYKVGEYVDVKVNG 126
           HG RSRTR +F R FRK G + ++TYL+ YKVG+ VD+K NG
Sbjct: 5   HGYRSRTRYMFQRDFRKHGAVHMSTYLKIYKVGDIVDIKANG 46

>RL21B_SCHPO (O42706) 60S ribosomal protein L21-B|
          Length = 160

 Score = 57.8 bits (138), Expect = 8e-09
 Identities = 26/42 (61%), Positives = 34/42 (80%)
 Frame = +1

Query: 1   HGLRSRTRDLFARPFRKKGYIPLTTYLRTYKVGEYVDVKVNG 126
           +G+R+RTR  F R FR+ G I L+TYL+TYKVG+ VD+KVNG
Sbjct: 5   YGIRARTRYTFQRGFREHGQIRLSTYLKTYKVGDIVDIKVNG 46

>RL21A_SCHPO (Q9UUC1) 60S ribosomal protein L21-A|
          Length = 160

 Score = 57.8 bits (138), Expect = 8e-09
 Identities = 26/42 (61%), Positives = 34/42 (80%)
 Frame = +1

Query: 1   HGLRSRTRDLFARPFRKKGYIPLTTYLRTYKVGEYVDVKVNG 126
           +G+R+RTR  F R FR+ G I L+TYL+TYKVG+ VD+KVNG
Sbjct: 5   YGIRARTRYTFQRGFREHGQIRLSTYLKTYKVGDIVDIKVNG 46

>RL21_PIG (P49666) 60S ribosomal protein L21 (Fragment)|
          Length = 61

 Score = 51.6 bits (122), Expect = 6e-07
 Identities = 23/41 (56%), Positives = 29/41 (70%)
 Frame = +1

Query: 4   GLRSRTRDLFARPFRKKGYIPLTTYLRTYKVGEYVDVKVNG 126
           G R  TR +F+RPFRK G +PL TY+R YK G+ VD+K  G
Sbjct: 5   GKRRGTRYMFSRPFRKHGVVPLATYMRIYKKGDIVDIKGMG 45

>RL21_RAT (P20280) 60S ribosomal protein L21|
          Length = 159

 Score = 51.6 bits (122), Expect = 6e-07
 Identities = 23/41 (56%), Positives = 29/41 (70%)
 Frame = +1

Query: 4   GLRSRTRDLFARPFRKKGYIPLTTYLRTYKVGEYVDVKVNG 126
           G R  TR +F+RPFRK G +PL TY+R YK G+ VD+K  G
Sbjct: 5   GKRRGTRYMFSRPFRKHGVVPLATYMRIYKKGDIVDIKGMG 45

>RL21_MOUSE (O09167) 60S ribosomal protein L21|
          Length = 159

 Score = 51.6 bits (122), Expect = 6e-07
 Identities = 23/41 (56%), Positives = 29/41 (70%)
 Frame = +1

Query: 4   GLRSRTRDLFARPFRKKGYIPLTTYLRTYKVGEYVDVKVNG 126
           G R  TR +F+RPFRK G +PL TY+R YK G+ VD+K  G
Sbjct: 5   GKRRGTRYMFSRPFRKHGVVPLATYMRIYKKGDIVDIKGMG 45

>RL21_HUMAN (P46778) 60S ribosomal protein L21|
          Length = 159

 Score = 51.6 bits (122), Expect = 6e-07
 Identities = 23/41 (56%), Positives = 29/41 (70%)
 Frame = +1

Query: 4   GLRSRTRDLFARPFRKKGYIPLTTYLRTYKVGEYVDVKVNG 126
           G R  TR +F+RPFRK G +PL TY+R YK G+ VD+K  G
Sbjct: 5   GKRRGTRYMFSRPFRKHGVVPLATYMRIYKKGDIVDIKGMG 45

>RL21_CHILA (Q6QN05) 60S ribosomal protein L21|
          Length = 159

 Score = 50.4 bits (119), Expect = 1e-06
 Identities = 22/41 (53%), Positives = 29/41 (70%)
 Frame = +1

Query: 4   GLRSRTRDLFARPFRKKGYIPLTTYLRTYKVGEYVDVKVNG 126
           G R  TR +F+RP+RK G +PL TY+R YK G+ VD+K  G
Sbjct: 5   GKRRGTRYMFSRPYRKHGVVPLATYMRIYKKGDIVDIKGMG 45

>RL21_CYAPA (O82574) 60S ribosomal protein L21|
          Length = 161

 Score = 50.4 bits (119), Expect = 1e-06
 Identities = 23/41 (56%), Positives = 30/41 (73%)
 Frame = +1

Query: 1   HGLRSRTRDLFARPFRKKGYIPLTTYLRTYKVGEYVDVKVN 123
           +G R+RTR LFAR F+  G + L+TYL  +K+GEYVDV  N
Sbjct: 5   YGYRARTRALFARAFKTNGPVHLSTYLTNFKIGEYVDVVGN 45

>RL21_CAEEL (P34334) 60S ribosomal protein L21|
          Length = 160

 Score = 47.0 bits (110), Expect = 1e-05
 Identities = 23/41 (56%), Positives = 27/41 (65%)
 Frame = +1

Query: 4   GLRSRTRDLFARPFRKKGYIPLTTYLRTYKVGEYVDVKVNG 126
           GLR  TR +FAR FRK G   L+TY   YK G+ VD+K NG
Sbjct: 5   GLRRGTRYMFARDFRKHGVEHLSTYYTQYKRGDLVDIKTNG 45

>RL21_AERPE (P58077) 50S ribosomal protein L21e|
          Length = 107

 Score = 44.7 bits (104), Expect = 7e-05
 Identities = 22/41 (53%), Positives = 30/41 (73%), Gaps = 1/41 (2%)
 Frame = +1

Query: 4   GLRSRTRDLFARPFRKKGYIP-LTTYLRTYKVGEYVDVKVN 123
           G R+RTR L  +P R+KG IP L+TYLR Y+VG+ V + +N
Sbjct: 7   GYRNRTRRLLRKPVREKGSIPRLSTYLREYRVGDKVAIIIN 47

>RL21_ENTHI (P38653) 60S ribosomal protein L21|
          Length = 166

 Score = 43.5 bits (101), Expect = 2e-04
 Identities = 21/41 (51%), Positives = 25/41 (60%)
 Frame = +1

Query: 1   HGLRSRTRDLFARPFRKKGYIPLTTYLRTYKVGEYVDVKVN 123
           +G   RTR LF RPFR  G    +T L TYKVG+YV +  N
Sbjct: 5   NGRNRRTRKLFKRPFRGHGLSNTSTILHTYKVGDYVTILCN 45

>RL21_XENLA (P49628) 60S ribosomal protein L21 (Fragment)|
          Length = 33

 Score = 43.1 bits (100), Expect = 2e-04
 Identities = 18/30 (60%), Positives = 23/30 (76%)
 Frame = +1

Query: 37  RPFRKKGYIPLTTYLRTYKVGEYVDVKVNG 126
           RPFRK G +PL+TY+R YK G+ VD+K  G
Sbjct: 1   RPFRKHGAVPLSTYMRIYKKGDIVDIKGMG 30

>RL21_PYUST (P49667) 60S ribosomal protein L21 (Fragment)|
          Length = 155

 Score = 42.7 bits (99), Expect = 3e-04
 Identities = 18/37 (48%), Positives = 26/37 (70%)
 Frame = +1

Query: 16  RTRDLFARPFRKKGYIPLTTYLRTYKVGEYVDVKVNG 126
           R  D+F++ FR++G IPL  YL  YK G+ VD+K +G
Sbjct: 8   RGSDMFSKKFRERGAIPLNKYLTVYKKGDIVDIKGDG 44

>RL21_SULAC (Q4JB11) 50S ribosomal protein L21e|
          Length = 103

 Score = 38.5 bits (88), Expect = 0.005
 Identities = 20/41 (48%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
 Frame = +1

Query: 4   GLRSRTRDLFARPFRKKGYIP-LTTYLRTYKVGEYVDVKVN 123
           G RS+TR L  +  R+KG IP L+  +  Y  GEYV VK+N
Sbjct: 7   GYRSKTRKLLEKKVREKGAIPKLSLLMHDYSQGEYVVVKIN 47

>RL21_SULTO (Q975F2) 50S ribosomal protein L21e|
          Length = 103

 Score = 35.8 bits (81), Expect = 0.034
 Identities = 16/41 (39%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
 Frame = +1

Query: 4   GLRSRTRDLFARPFRKKGYIP-LTTYLRTYKVGEYVDVKVN 123
           G R+RTR L  +  R++G +P L+  +  +K G+YV +K+N
Sbjct: 7   GYRTRTRKLLTKNVRERGAVPRLSLLMEEFKEGDYVVIKIN 47

>RL21_METJA (P54013) 50S ribosomal protein L21e|
          Length = 98

 Score = 35.0 bits (79), Expect = 0.058
 Identities = 15/40 (37%), Positives = 25/40 (62%)
 Frame = +1

Query: 4   GLRSRTRDLFARPFRKKGYIPLTTYLRTYKVGEYVDVKVN 123
           G R +TR   ++  R++G  P+T  LR +K GEYV + ++
Sbjct: 7   GFRRKTRKKLSKHPRERGLYPITRALREFKEGEYVHIVID 46

>RL21_PYRFU (Q8U217) 50S ribosomal protein L21e|
          Length = 97

 Score = 32.3 bits (72), Expect = 0.38
 Identities = 13/40 (32%), Positives = 25/40 (62%)
 Frame = +1

Query: 1   HGLRSRTRDLFARPFRKKGYIPLTTYLRTYKVGEYVDVKV 120
           H  R +TR   ++  R++G  PLT +L+ ++VG+ V + +
Sbjct: 6   HSFRRKTRKKLSKHPRRRGLPPLTRFLQEFEVGQRVHIVI 45

>RL21_PYRAE (Q8ZTB5) 50S ribosomal protein L21e|
          Length = 100

 Score = 32.3 bits (72), Expect = 0.38
 Identities = 16/41 (39%), Positives = 24/41 (58%)
 Frame = +1

Query: 1   HGLRSRTRDLFARPFRKKGYIPLTTYLRTYKVGEYVDVKVN 123
           HG R +TR L  +  R+KG   L+  L  YKVG+ V + ++
Sbjct: 6   HGYRYKTRKLLRKKPREKGLSGLSRLLYEYKVGDKVIIDID 46

>RL21_PYRKO (Q5JI51) 50S ribosomal protein L21e|
          Length = 98

 Score = 32.3 bits (72), Expect = 0.38
 Identities = 13/40 (32%), Positives = 25/40 (62%)
 Frame = +1

Query: 1   HGLRSRTRDLFARPFRKKGYIPLTTYLRTYKVGEYVDVKV 120
           H  R +TR   ++  R++G  PLT +L+ ++VG+ V + +
Sbjct: 6   HSFRRKTRGKLSKHPRRRGLPPLTRFLQEFEVGQKVHIVI 45

>RL21_PYRHO (O74001) 50S ribosomal protein L21e|
          Length = 97

 Score = 31.6 bits (70), Expect = 0.64
 Identities = 13/40 (32%), Positives = 24/40 (60%)
 Frame = +1

Query: 1   HGLRSRTRDLFARPFRKKGYIPLTTYLRTYKVGEYVDVKV 120
           H  R +TR    +  R++G  PLT +L+ ++VG+ V + +
Sbjct: 6   HSFRRKTRKKLRKHPRRRGLPPLTRFLQEFEVGQKVHIVI 45

>RL21_PYRAB (Q9UZP1) 50S ribosomal protein L21e|
          Length = 97

 Score = 31.6 bits (70), Expect = 0.64
 Identities = 13/40 (32%), Positives = 24/40 (60%)
 Frame = +1

Query: 1   HGLRSRTRDLFARPFRKKGYIPLTTYLRTYKVGEYVDVKV 120
           H  R +TR    +  R++G  PLT +L+ ++VG+ V + +
Sbjct: 6   HSFRRKTRKKLRKHPRRRGLPPLTRFLQEFEVGQRVHIVI 45

>RL21_METMP (Q6M125) 50S ribosomal protein L21e|
          Length = 97

 Score = 30.8 bits (68), Expect = 1.1
 Identities = 16/37 (43%), Positives = 21/37 (56%)
 Frame = +1

Query: 4   GLRSRTRDLFARPFRKKGYIPLTTYLRTYKVGEYVDV 114
           G RS+TR    +  R+KG  PLT  L+ Y  G+ V V
Sbjct: 6   GFRSKTRYKLQKHPRQKGMAPLTRALKCYTEGDLVHV 42

>YAE1_SCHPO (Q09842) Hypothetical PWWP domain protein C23D3.01|
          Length = 407

 Score = 28.5 bits (62), Expect = 5.4
 Identities = 17/41 (41%), Positives = 26/41 (63%), Gaps = 4/41 (9%)
 Frame = +1

Query: 13  SRTRDLFARPFRKKG----YIPLTTYLRTYKVGEYVDVKVN 123
           S T++L  R  +KKG    Y+P T+  ++YK GEYV  K++
Sbjct: 34  SNTKNL--RDVKKKGKQLAYVPRTSPRKSYKNGEYVLAKMS 72


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,323,298
Number of Sequences: 219361
Number of extensions: 120524
Number of successful extensions: 450
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 444
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 448
length of database: 80,573,946
effective HSP length: 17
effective length of database: 76,844,809
effective search space used: 1844275416
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)