| Clone Name | baal25j12 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK102797.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033108D09, full insert sequence Length = 2625 Score = 367 bits (185), Expect = 3e-98 Identities = 391/457 (85%), Gaps = 2/457 (0%) Strand = Plus / Plus Query: 89 gagtgggagcccatacgggccgtcaaggcgcgcctcagggacctcgaccggaagcgccag 148 |||||||||||||||||| |||||||||||||||||||| | || |||| ||| ||| Sbjct: 527 gagtgggagcccatacggatggtcaaggcgcgcctcagggagatggagcggaggcggcag 586 Query: 149 gaccaggccagcgacgtgctccacaaggttcaagctcagcctgaaatcgatgagctttgc 208 ||||||| |||| ||||||||||||| |||||||||| ||||||| |||||||||| Sbjct: 587 tggcaggccaccgacatgctccacaaggt-caagctcagcttgaaatcaatgagctttgt 645 Query: 209 acctgaagcatctgaggaagtaccaccactgggatttaaacgaactccttgcatattttc 268 ||||||||||||||||||||| ||||| || | ||||| |||||||| |||||||| | Sbjct: 646 acctgaagcatctgaggaagttccaccgctag-atttaggtgaactcctggcatatttcc 704 Query: 269 taaagcaatctggaccattgtttgaccaacttggtataaaaagagatgtgtgtgacaagt 328 ||||||||||||| |||||||||||||||||||||||||||||||| ||||| || ||| Sbjct: 705 taaagcaatctgggccattgtttgaccaacttggtataaaaagagacgtgtgcgataagc 764 Query: 329 tggtggagtctctatgcagcaagcgcaaggaccattttgtatatgatcctttgtcaacta 388 ||||||| ||||| |||||||| ||||||||||| ||| |||| || | || || | | Sbjct: 765 tggtggaatctctgtgcagcaaacgcaaggaccaccttgcatataattcatttccagcaa 824 Query: 389 gtgaatcatcttccttcagaaatgacaatacttgtgatgaacttgacctaagaatagcta 448 ||||| |||| | ||||| ||||||||| || ||||||||||||||||||||||||||| Sbjct: 825 gtgaaccatccgcattcagcaatgacaatgctggtgatgaacttgacctaagaatagcta 884 Query: 449 gcgtccttcaaagtacagggcatcattatgaaggtgggttttgggatgatgggcaaaaat 508 | ||| | ||||||||||| || ||||||||||||| |||||| |||||||||| |||| Sbjct: 885 gtgtcgtgcaaagtacaggacacaattatgaaggtggattttggaatgatgggcataaat 944 Query: 509 atgacgtagctgacaagagacatgttgccatagtcac 545 |||| |||||||||||| |||||||| |||||||| Sbjct: 945 atgaaacagctgacaagaggcatgttgcgatagtcac 981
>gb|AC133217.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0052H02, complete sequence Length = 159632 Score = 163 bits (82), Expect = 8e-37 Identities = 193/230 (83%) Strand = Plus / Plus Query: 316 gtgtgtgacaagttggtggagtctctatgcagcaagcgcaaggaccattttgtatatgat 375 ||||| || ||| ||||||| ||||| |||||||| ||||||||||| ||| |||| || Sbjct: 82793 gtgtgcgataagctggtggaatctctgtgcagcaaacgcaaggaccaccttgcatataat 82852 Query: 376 cctttgtcaactagtgaatcatcttccttcagaaatgacaatacttgtgatgaacttgac 435 | || || | |||||| |||| | ||||| ||||||||| || |||||||||||||| Sbjct: 82853 tcatttccagcaagtgaaccatccgcattcagcaatgacaatgctggtgatgaacttgac 82912 Query: 436 ctaagaatagctagcgtccttcaaagtacagggcatcattatgaaggtgggttttgggat 495 |||||||||||||| ||| | ||||||||||| || ||||||||||||| |||||| || Sbjct: 82913 ctaagaatagctagtgtcgtgcaaagtacaggacacaattatgaaggtggattttggaat 82972 Query: 496 gatgggcaaaaatatgacgtagctgacaagagacatgttgccatagtcac 545 |||||||| |||||||| |||||||||||| |||||||| |||||||| Sbjct: 82973 gatgggcataaatatgaaacagctgacaagaggcatgttgcgatagtcac 83022 Score = 103 bits (52), Expect = 6e-19 Identities = 61/64 (95%) Strand = Plus / Plus Query: 250 gaactccttgcatattttctaaagcaatctggaccattgtttgaccaacttggtataaaa 309 |||||||| |||||||| |||||||||||||| ||||||||||||||||||||||||||| Sbjct: 82620 gaactcctggcatatttcctaaagcaatctgggccattgtttgaccaacttggtataaaa 82679 Query: 310 agag 313 |||| Sbjct: 82680 agag 82683 Score = 71.9 bits (36), Expect = 2e-09 Identities = 85/100 (85%), Gaps = 1/100 (1%) Strand = Plus / Plus Query: 89 gagtgggagcccatacgggccgtcaaggcgcgcctcagggacctcgaccggaagcgccag 148 |||||||||||||||||| |||||||||||||||||||| | || |||| ||| ||| Sbjct: 80743 gagtgggagcccatacggatggtcaaggcgcgcctcagggagatggagcggaggcggcag 80802 Query: 149 gaccaggccagcgacgtgctccacaaggttcaagctcagc 188 ||||||| |||| |||||||||||| ||||||||||| Sbjct: 80803 tggcaggccaccgacatgctccacaagg-tcaagctcagc 80841 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 191 gaaatcgatgagctttgcacctgaagcatctgaggaagta 230 |||||| |||||||||| ||||||||||||||||| |||| Sbjct: 82088 gaaatcaatgagctttgtacctgaagcatctgaggtagta 82127
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 163 bits (82), Expect = 8e-37 Identities = 193/230 (83%) Strand = Plus / Plus Query: 316 gtgtgtgacaagttggtggagtctctatgcagcaagcgcaaggaccattttgtatatgat 375 ||||| || ||| ||||||| ||||| |||||||| ||||||||||| ||| |||| || Sbjct: 2802986 gtgtgcgataagctggtggaatctctgtgcagcaaacgcaaggaccaccttgcatataat 2803045 Query: 376 cctttgtcaactagtgaatcatcttccttcagaaatgacaatacttgtgatgaacttgac 435 | || || | |||||| |||| | ||||| ||||||||| || |||||||||||||| Sbjct: 2803046 tcatttccagcaagtgaaccatccgcattcagcaatgacaatgctggtgatgaacttgac 2803105 Query: 436 ctaagaatagctagcgtccttcaaagtacagggcatcattatgaaggtgggttttgggat 495 |||||||||||||| ||| | ||||||||||| || ||||||||||||| |||||| || Sbjct: 2803106 ctaagaatagctagtgtcgtgcaaagtacaggacacaattatgaaggtggattttggaat 2803165 Query: 496 gatgggcaaaaatatgacgtagctgacaagagacatgttgccatagtcac 545 |||||||| |||||||| |||||||||||| |||||||| |||||||| Sbjct: 2803166 gatgggcataaatatgaaacagctgacaagaggcatgttgcgatagtcac 2803215 Score = 103 bits (52), Expect = 6e-19 Identities = 61/64 (95%) Strand = Plus / Plus Query: 250 gaactccttgcatattttctaaagcaatctggaccattgtttgaccaacttggtataaaa 309 |||||||| |||||||| |||||||||||||| ||||||||||||||||||||||||||| Sbjct: 2802813 gaactcctggcatatttcctaaagcaatctgggccattgtttgaccaacttggtataaaa 2802872 Query: 310 agag 313 |||| Sbjct: 2802873 agag 2802876 Score = 71.9 bits (36), Expect = 2e-09 Identities = 85/100 (85%), Gaps = 1/100 (1%) Strand = Plus / Plus Query: 89 gagtgggagcccatacgggccgtcaaggcgcgcctcagggacctcgaccggaagcgccag 148 |||||||||||||||||| |||||||||||||||||||| | || |||| ||| ||| Sbjct: 2800936 gagtgggagcccatacggatggtcaaggcgcgcctcagggagatggagcggaggcggcag 2800995 Query: 149 gaccaggccagcgacgtgctccacaaggttcaagctcagc 188 ||||||| |||| |||||||||||| ||||||||||| Sbjct: 2800996 tggcaggccaccgacatgctccacaagg-tcaagctcagc 2801034 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 191 gaaatcgatgagctttgcacctgaagcatctgaggaagta 230 |||||| |||||||||| ||||||||||||||||| |||| Sbjct: 2802281 gaaatcaatgagctttgtacctgaagcatctgaggtagta 2802320
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 163 bits (82), Expect = 8e-37 Identities = 193/230 (83%) Strand = Plus / Plus Query: 316 gtgtgtgacaagttggtggagtctctatgcagcaagcgcaaggaccattttgtatatgat 375 ||||| || ||| ||||||| ||||| |||||||| ||||||||||| ||| |||| || Sbjct: 2812017 gtgtgcgataagctggtggaatctctgtgcagcaaacgcaaggaccaccttgcatataat 2812076 Query: 376 cctttgtcaactagtgaatcatcttccttcagaaatgacaatacttgtgatgaacttgac 435 | || || | |||||| |||| | ||||| ||||||||| || |||||||||||||| Sbjct: 2812077 tcatttccagcaagtgaaccatccgcattcagcaatgacaatgctggtgatgaacttgac 2812136 Query: 436 ctaagaatagctagcgtccttcaaagtacagggcatcattatgaaggtgggttttgggat 495 |||||||||||||| ||| | ||||||||||| || ||||||||||||| |||||| || Sbjct: 2812137 ctaagaatagctagtgtcgtgcaaagtacaggacacaattatgaaggtggattttggaat 2812196 Query: 496 gatgggcaaaaatatgacgtagctgacaagagacatgttgccatagtcac 545 |||||||| |||||||| |||||||||||| |||||||| |||||||| Sbjct: 2812197 gatgggcataaatatgaaacagctgacaagaggcatgttgcgatagtcac 2812246 Score = 103 bits (52), Expect = 6e-19 Identities = 61/64 (95%) Strand = Plus / Plus Query: 250 gaactccttgcatattttctaaagcaatctggaccattgtttgaccaacttggtataaaa 309 |||||||| |||||||| |||||||||||||| ||||||||||||||||||||||||||| Sbjct: 2811844 gaactcctggcatatttcctaaagcaatctgggccattgtttgaccaacttggtataaaa 2811903 Query: 310 agag 313 |||| Sbjct: 2811904 agag 2811907 Score = 71.9 bits (36), Expect = 2e-09 Identities = 85/100 (85%), Gaps = 1/100 (1%) Strand = Plus / Plus Query: 89 gagtgggagcccatacgggccgtcaaggcgcgcctcagggacctcgaccggaagcgccag 148 |||||||||||||||||| |||||||||||||||||||| | || |||| ||| ||| Sbjct: 2809967 gagtgggagcccatacggatggtcaaggcgcgcctcagggagatggagcggaggcggcag 2810026 Query: 149 gaccaggccagcgacgtgctccacaaggttcaagctcagc 188 ||||||| |||| |||||||||||| ||||||||||| Sbjct: 2810027 tggcaggccaccgacatgctccacaagg-tcaagctcagc 2810065 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 191 gaaatcgatgagctttgcacctgaagcatctgaggaagta 230 |||||| |||||||||| ||||||||||||||||| |||| Sbjct: 2811312 gaaatcaatgagctttgtacctgaagcatctgaggtagta 2811351
>ref|XM_472431.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2328 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Plus Query: 273 gcaatctggaccattgtttgaccaacttggtataaaaagagatgtgtgtgacaa 326 ||||||||||||||| | |||||||||||||| | ||||||| | |||||||| Sbjct: 657 gcaatctggaccatttctggaccaacttggtattagaagagatttatgtgacaa 710
>gb|AC084208.5| Homo sapiens BAC clone RP11-228P15 from 2, complete sequence Length = 141130 Score = 48.1 bits (24), Expect = 0.031 Identities = 24/24 (100%) Strand = Plus / Minus Query: 304 ataaaaagagatgtgtgtgacaag 327 |||||||||||||||||||||||| Sbjct: 23666 ataaaaagagatgtgtgtgacaag 23643
>emb|AJ871581.1| Streptomyces achromogenes subsp. rubradiris complete rubradirin gene cluster, strain NRRL 3061 Length = 105657 Score = 48.1 bits (24), Expect = 0.031 Identities = 24/24 (100%) Strand = Plus / Minus Query: 76 cgaggacgccgccgagtgggagcc 99 |||||||||||||||||||||||| Sbjct: 21247 cgaggacgccgccgagtgggagcc 21224
>ref|NM_180230.1| Arabidopsis thaliana DGD1 (DIGALACTOSYL DIACYLGLYCEROL DEFICIENT 1); galactolipid galactosyltransferase AT3G11670 (DGD1) transcript variant AT3G11670.2 mRNA, complete cds Length = 2044 Score = 46.1 bits (23), Expect = 0.12 Identities = 35/39 (89%) Strand = Plus / Plus Query: 454 cttcaaagtacagggcatcattatgaaggtgggttttgg 492 |||||||| ||||| || |||||||| |||||||||||| Sbjct: 1006 cttcaaagcacaggacaccattatgatggtgggttttgg 1044
>ref|NM_111999.2| Arabidopsis thaliana DGD1 (DIGALACTOSYL DIACYLGLYCEROL DEFICIENT 1); galactolipid galactosyltransferase/ transferase, transferring glycosyl groups AT3G11670 (DGD1) transcript variant AT3G11670.1 mRNA, complete cds Length = 2670 Score = 46.1 bits (23), Expect = 0.12 Identities = 35/39 (89%) Strand = Plus / Plus Query: 454 cttcaaagtacagggcatcattatgaaggtgggttttgg 492 |||||||| ||||| || |||||||| |||||||||||| Sbjct: 1006 cttcaaagcacaggacaccattatgatggtgggttttgg 1044
>gb|AC009918.5|ATAC009918 Arabidopsis thaliana chromosome III BAC T19F11 genomic sequence, complete sequence Length = 45173 Score = 46.1 bits (23), Expect = 0.12 Identities = 35/39 (89%) Strand = Plus / Minus Query: 454 cttcaaagtacagggcatcattatgaaggtgggttttgg 492 |||||||| ||||| || |||||||| |||||||||||| Sbjct: 19543 cttcaaagcacaggacaccattatgatggtgggttttgg 19505
>gb|AY101521.1| Arabidopsis thaliana AT3g11670/T19F11_7 mRNA, complete cds Length = 2427 Score = 46.1 bits (23), Expect = 0.12 Identities = 35/39 (89%) Strand = Plus / Plus Query: 454 cttcaaagtacagggcatcattatgaaggtgggttttgg 492 |||||||| ||||| || |||||||| |||||||||||| Sbjct: 955 cttcaaagcacaggacaccattatgatggtgggttttgg 993
>gb|AY075649.1| Arabidopsis thaliana AT3g11670/T19F11_7 mRNA, complete cds Length = 2670 Score = 46.1 bits (23), Expect = 0.12 Identities = 35/39 (89%) Strand = Plus / Plus Query: 454 cttcaaagtacagggcatcattatgaaggtgggttttgg 492 |||||||| ||||| || |||||||| |||||||||||| Sbjct: 1006 cttcaaagcacaggacaccattatgatggtgggttttgg 1044
>gb|AF149842.1|AF149842 Arabidopsis thaliana digalactosyldiacylglycerol synthase (DGD1) gene, complete cds Length = 5128 Score = 46.1 bits (23), Expect = 0.12 Identities = 35/39 (89%) Strand = Plus / Plus Query: 454 cttcaaagtacagggcatcattatgaaggtgggttttgg 492 |||||||| ||||| || |||||||| |||||||||||| Sbjct: 2324 cttcaaagcacaggacaccattatgatggtgggttttgg 2362
>gb|AF149841.1|AF149841 Arabidopsis thaliana digalactosyldiacylglycerol synthase (DGD1) mRNA, complete cds Length = 2643 Score = 46.1 bits (23), Expect = 0.12 Identities = 35/39 (89%) Strand = Plus / Plus Query: 454 cttcaaagtacagggcatcattatgaaggtgggttttgg 492 |||||||| ||||| || |||||||| |||||||||||| Sbjct: 1016 cttcaaagcacaggacaccattatgatggtgggttttgg 1054
>gb|AC139244.4| Mus musculus BAC clone RP23-324J8 from 16, complete sequence Length = 209201 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 63 ggaggtgggaggacgaggacgccgccg 89 |||||||||||| |||||||||||||| Sbjct: 169877 ggaggtgggagggcgaggacgccgccg 169903
>gb|AE017351.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 11, complete sequence Length = 1019846 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 60 gctggaggtgggaggacgagga 81 |||||||||||||||||||||| Sbjct: 761161 gctggaggtgggaggacgagga 761182
>gb|AC133003.3| Oryza sativa chromosome 3 BAC OSJNBa0010D22 genomic sequence, complete sequence Length = 190055 Score = 44.1 bits (22), Expect = 0.49 Identities = 28/30 (93%) Strand = Plus / Plus Query: 60 gctggaggtgggaggacgaggacgccgccg 89 |||||||||||| |||||| |||||||||| Sbjct: 100507 gctggaggtggggggacgacgacgccgccg 100536
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 44.1 bits (22), Expect = 0.49 Identities = 28/30 (93%) Strand = Plus / Plus Query: 60 gctggaggtgggaggacgaggacgccgccg 89 |||||||||||| |||||| |||||||||| Sbjct: 21407596 gctggaggtggggggacgacgacgccgccg 21407625
>ref|XM_567861.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein (CNK02610) partial mRNA Length = 1113 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 60 gctggaggtgggaggacgagga 81 |||||||||||||||||||||| Sbjct: 90 gctggaggtgggaggacgagga 69
>emb|AL008635.1|HS510H16 Human DNA sequence from clone RP3-510H16 on chromosome 22q12.1-12.3, complete sequence Length = 102484 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 453 ccttcaaagtacagggcatcat 474 |||||||||||||||||||||| Sbjct: 63015 ccttcaaagtacagggcatcat 63036
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 44.1 bits (22), Expect = 0.49 Identities = 28/30 (93%) Strand = Plus / Plus Query: 60 gctggaggtgggaggacgaggacgccgccg 89 |||||||||||| |||||| |||||||||| Sbjct: 21400625 gctggaggtggggggacgacgacgccgccg 21400654
>emb|Z82097.1|HSF77D12 Human DNA sequence from clone CITF22-77D12 on chromosome 22, complete sequence Length = 41611 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 453 ccttcaaagtacagggcatcat 474 |||||||||||||||||||||| Sbjct: 35160 ccttcaaagtacagggcatcat 35139
>ref|NM_106042.2| Arabidopsis thaliana unknown protein AT1G73820 mRNA, complete cds Length = 863 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 413 acaatacttgtgatgaacttg 433 ||||||||||||||||||||| Sbjct: 447 acaatacttgtgatgaacttg 467
>gb|U43521.1|PBU43521 Plasmodium berghei merozoite surface protein-1 gene, complete cds Length = 5750 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 409 aatgacaatacttgtgatgaa 429 ||||||||||||||||||||| Sbjct: 767 aatgacaatacttgtgatgaa 787
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome Length = 2584158 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 71 gaggacgaggacgccgccgag 91 ||||||||||||||||||||| Sbjct: 1563699 gaggacgaggacgccgccgag 1563679
>ref|XM_745655.1| Aspergillus fumigatus Af293 protein kinase (Afu6g08590) partial mRNA Length = 2922 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 393 atcatcttccttcagaaatga 413 ||||||||||||||||||||| Sbjct: 1296 atcatcttccttcagaaatga 1316
>ref|XM_673413.1| Plasmodium berghei strain ANKA merozoite surface protein 1, precursor (PB000172.01.0) partial mRNA Length = 4671 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 409 aatgacaatacttgtgatgaa 429 ||||||||||||||||||||| Sbjct: 424 aatgacaatacttgtgatgaa 444
>emb|AL606598.3|OSJN00036 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0033G16, complete sequence Length = 114051 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Plus Query: 273 gcaatctggaccattgtttgaccaacttggtat 305 ||||||||||||||| | |||||||||||||| Sbjct: 32175 gcaatctggaccatttctggaccaacttggtat 32207
>emb|AL606453.2|OSJN00010 Oryza sativa genomic DNA, chromosome 4, BAC clone: OJ991214_12, complete sequence Length = 116952 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Plus Query: 273 gcaatctggaccattgtttgaccaacttggtat 305 ||||||||||||||| | |||||||||||||| Sbjct: 108469 gcaatctggaccatttctggaccaacttggtat 108501
>emb|BX510356.7| Zebrafish DNA sequence from clone DKEY-6I22 in linkage group 14, complete sequence Length = 167499 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 259 gcatattttctaaagcaatct 279 ||||||||||||||||||||| Sbjct: 145534 gcatattttctaaagcaatct 145514
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Plus Query: 273 gcaatctggaccattgtttgaccaacttggtat 305 ||||||||||||||| | |||||||||||||| Sbjct: 20597841 gcaatctggaccatttctggaccaacttggtat 20597873
>emb|BX818636.1|CNS0ACQL Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL89ZH11 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 754 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 413 acaatacttgtgatgaacttg 433 ||||||||||||||||||||| Sbjct: 389 acaatacttgtgatgaacttg 409
>emb|BX817366.1|CNS0ACR1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL18ZF03 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 810 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 413 acaatacttgtgatgaacttg 433 ||||||||||||||||||||| Sbjct: 423 acaatacttgtgatgaacttg 443
>gb|AC012679.5|AC012679 Arabidopsis thaliana chromosome 1 BAC F25P22 genomic sequence, complete sequence Length = 105937 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 413 acaatacttgtgatgaacttg 433 ||||||||||||||||||||| Sbjct: 83872 acaatacttgtgatgaacttg 83852
>gb|BT005558.1| Arabidopsis thaliana clone U51071 unknown protein (At1g73820) mRNA, complete cds Length = 613 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 413 acaatacttgtgatgaacttg 433 ||||||||||||||||||||| Sbjct: 394 acaatacttgtgatgaacttg 414
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 71 gaggacgaggacgccgccgag 91 ||||||||||||||||||||| Sbjct: 2044566 gaggacgaggacgccgccgag 2044586
>dbj|AK119020.1| Arabidopsis thaliana At1g73820 mRNA for unknown protein, complete cds, clone: RAFL21-34-J07 Length = 863 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 413 acaatacttgtgatgaacttg 433 ||||||||||||||||||||| Sbjct: 447 acaatacttgtgatgaacttg 467
>gb|AF187232.1|AF187232 Plasmodium berghei merozoite surface antigen 1 gene, complete cds Length = 5376 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 409 aatgacaatacttgtgatgaa 429 ||||||||||||||||||||| Sbjct: 640 aatgacaatacttgtgatgaa 660
>gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, complete sequence Length = 3131724 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 71 gaggacgaggacgccgccgag 91 ||||||||||||||||||||| Sbjct: 2668978 gaggacgaggacgccgccgag 2668998
>gb|CP000144.1| Rhodobacter sphaeroides 2.4.1 chromosome 2, complete genome Length = 943016 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 15 ggcgttcgaggccgaggtcg 34 |||||||||||||||||||| Sbjct: 15572 ggcgttcgaggccgaggtcg 15591
>gb|AC136449.21| Medicago truncatula clone mth2-11k13, complete sequence Length = 112369 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 271 aagcaatctggaccattgtt 290 |||||||||||||||||||| Sbjct: 81223 aagcaatctggaccattgtt 81204
>emb|AL512324.14| Human DNA sequence from clone RP11-432I13 on chromosome 10 Contains the 3' end of a breast cancer antigen (NY-BR-1) pseudogene, the 3' end of a novel gene, a pseudogene similar to part of cubilin (intrinsic factor-cobalamin receptor, CUBN), a seven transmembrane helix receptor (FLJ31393) pseudogene, the OR13A1 gene for olfactory receptor family 13 subfamily A member 1 and two CpG islands, complete sequence Length = 168473 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 476 atgaaggtgggttttgggat 495 |||||||||||||||||||| Sbjct: 121376 atgaaggtgggttttgggat 121395
>emb|AL512636.12| Human DNA sequence from clone RP11-213D12 on chromosome 6 Contains part of a novel gene, complete sequence Length = 160255 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 253 ctccttgcatattttctaaa 272 |||||||||||||||||||| Sbjct: 95121 ctccttgcatattttctaaa 95102
>emb|AL162591.16| Human DNA sequence from clone RP11-350G8 on chromosome 1 Contains the 3' end of the AQP10 gene for aquaporin 10, the ATP8B2 gene for ATPase, Class I, type 8B, member 2, a mitochondrial ribosomal protein S33 (MRPS33) pseudogene, a novel gene, the IL6R gene for interleukin 6 receptor, a proteasome (prosome, macropain) 26S subunit, non-ATPase, 8 (PSMD8) pseduogene, a novel gene (LOC126669), the 5' end of a novel gene (DKFZp434M202) and a CpG island, complete sequence Length = 201167 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 391 gaatcatcttccttcagaaa 410 |||||||||||||||||||| Sbjct: 44440 gaatcatcttccttcagaaa 44459
>emb|AL939132.1|SCO939132 Streptomyces coelicolor A3(2) complete genome; segment 29/29 Length = 302007 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 66 ggtgggaggacgaggacgcc 85 |||||||||||||||||||| Sbjct: 236094 ggtgggaggacgaggacgcc 236075
>gb|AC103749.2| Homo sapiens chromosome 15, clone RP11-4F5, complete sequence Length = 190678 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 220 ctgaggaagtaccaccactg 239 |||||||||||||||||||| Sbjct: 180023 ctgaggaagtaccaccactg 180042
>emb|AJ514266.1|MAR514266 Cicindela arachnoides partial mp20 gene for muscular protein 20, exons 1-4 Length = 1239 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 303 tataaaaagagatgtgtgtg 322 |||||||||||||||||||| Sbjct: 43 tataaaaagagatgtgtgtg 24
>gb|AC148528.15| Medicago truncatula clone mth2-53h4, complete sequence Length = 141776 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 271 aagcaatctggaccattgtt 290 |||||||||||||||||||| Sbjct: 24248 aagcaatctggaccattgtt 24229
>dbj|AK147270.1| Mus musculus cDNA, RIKEN full-length enriched library, clone:M5C1004K09 product:RIKEN cDNA 1700020I14 gene, full insert sequence Length = 8279 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 394 tcatcttccttcagaaatgacaat 417 |||||||||||||||||| ||||| Sbjct: 6406 tcatcttccttcagaaataacaat 6429
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 70 ggaggacgaggacgccgccg 89 |||||||||||||||||||| Sbjct: 12516730 ggaggacgaggacgccgccg 12516749
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 70 ggaggacgaggacgccgccg 89 |||||||||||||||||||| Sbjct: 5889229 ggaggacgaggacgccgccg 5889210
>gb|AC158187.2| Selaginella moellendorffii clone JGIASXY-5I19, complete sequence Length = 40590 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 75 acgaggacgccgccgagtgg 94 |||||||||||||||||||| Sbjct: 34053 acgaggacgccgccgagtgg 34034
>gb|AC135626.4| Homo sapiens chromosome 15, clone RP11-354B3, complete sequence Length = 180684 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 220 ctgaggaagtaccaccactg 239 |||||||||||||||||||| Sbjct: 35910 ctgaggaagtaccaccactg 35929
>dbj|AK130291.1| Homo sapiens cDNA FLJ26781 fis, clone PRS03883 Length = 4590 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 220 ctgaggaagtaccaccactg 239 |||||||||||||||||||| Sbjct: 2950 ctgaggaagtaccaccactg 2931
>dbj|AK068287.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013149F18, full insert sequence Length = 815 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 70 ggaggacgaggacgccgccg 89 |||||||||||||||||||| Sbjct: 424 ggaggacgaggacgccgccg 405
>emb|AJ867418.1| Physodeutera alluaudi partial mp20 gene for muscular protein 20, exons 1-4 Length = 1216 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 303 tataaaaagagatgtgtgtg 322 |||||||||||||||||||| Sbjct: 37 tataaaaagagatgtgtgtg 18
>dbj|AP000872.5| Homo sapiens genomic DNA, chromosome 11q clone:RP11-727A20, complete sequences Length = 157330 Score = 40.1 bits (20), Expect = 7.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 398 cttccttcagaaatgacaatacttgtga 425 ||||| |||||||||||||| ||||||| Sbjct: 80096 cttccctcagaaatgacaatccttgtga 80123
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 70 ggaggacgaggacgccgccg 89 |||||||||||||||||||| Sbjct: 12471100 ggaggacgaggacgccgccg 12471119
>emb|AL732534.4|CNS08C99 Oryza sativa chromosome 12, . BAC OSJNBb0061N09 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 92799 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 70 ggaggacgaggacgccgccg 89 |||||||||||||||||||| Sbjct: 13492 ggaggacgaggacgccgccg 13511
>emb|AL954826.3|CNS08CD2 Oryza sativa chromosome 12, . BAC OSJNBb0080P14 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 132241 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 70 ggaggacgaggacgccgccg 89 |||||||||||||||||||| Sbjct: 118208 ggaggacgaggacgccgccg 118227
>gb|AC140409.3| Mus musculus BAC clone RP23-138K22 from 9, complete sequence Length = 200157 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 529 catgttgccatagtcactac 548 |||||||||||||||||||| Sbjct: 195890 catgttgccatagtcactac 195871
>emb|AL844536.13| Mouse DNA sequence from clone RP23-22A15 on chromosome 2, complete sequence Length = 245993 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 394 tcatcttccttcagaaatgacaat 417 |||||||||||||||||| ||||| Sbjct: 67260 tcatcttccttcagaaataacaat 67283
>gb|M58318.1|HUMALA Homo sapiens ala gene Length = 7076 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 358 gaccattttgtatatgatcctttg 381 ||||||||||||||| |||||||| Sbjct: 925 gaccattttgtatatcatcctttg 948 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,772,461 Number of Sequences: 3902068 Number of extensions: 4772461 Number of successful extensions: 89071 Number of sequences better than 10.0: 63 Number of HSP's better than 10.0 without gapping: 63 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 88487 Number of HSP's gapped (non-prelim): 578 length of query: 562 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 539 effective length of database: 17,143,297,704 effective search space: 9240237462456 effective search space used: 9240237462456 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)