>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score =  190 bits (96), Expect = 8e-46
 Identities = 129/140 (92%)
 Strand = Plus / Minus

                                                                           
Query: 5       tctaaaagaaggaacacagctatccataaacccactggtattgtgggcttgggctggtct 64
               |||||||||||||||| | ||||||||||| |||||||| || ||||| |||||||||||
Sbjct: 2266182 tctaaaagaaggaacaaaactatccataaatccactggtcttatgggcctgggctggtct 2266123

                                                                           
Query: 65      cctgatcaatgccatcaatagcatccccgcaggagagcttgacggcggccgcatagcgct 124
               ||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||  |
Sbjct: 2266122 cctgatcaatgccatcaatagcatccctgcaggagagcttgatggcggccgcatagcatt 2266063

                                   
Query: 125     cgccatgtggggaagaaagg 144
                |||||||||||||||||||
Sbjct: 2266062 tgccatgtggggaagaaagg 2266043

>dbj|AP002483.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
             clone:P0019D06
          Length = 167405

 Score =  190 bits (96), Expect = 8e-46
 Identities = 129/140 (92%)
 Strand = Plus / Minus

                                                                         
Query: 5     tctaaaagaaggaacacagctatccataaacccactggtattgtgggcttgggctggtct 64
             |||||||||||||||| | ||||||||||| |||||||| || ||||| |||||||||||
Sbjct: 49766 tctaaaagaaggaacaaaactatccataaatccactggtcttatgggcctgggctggtct 49707

                                                                         
Query: 65    cctgatcaatgccatcaatagcatccccgcaggagagcttgacggcggccgcatagcgct 124
             ||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||  |
Sbjct: 49706 cctgatcaatgccatcaatagcatccctgcaggagagcttgatggcggccgcatagcatt 49647

                                 
Query: 125   cgccatgtggggaagaaagg 144
              |||||||||||||||||||
Sbjct: 49646 tgccatgtggggaagaaagg 49627

>ref|XM_550092.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2054

 Score =  188 bits (95), Expect = 3e-45
 Identities = 128/139 (92%)
 Strand = Plus / Plus

                                                                        
Query: 5    tctaaaagaaggaacacagctatccataaacccactggtattgtgggcttgggctggtct 64
            |||||||||||||||| | ||||||||||| |||||||| || ||||| |||||||||||
Sbjct: 1292 tctaaaagaaggaacaaaactatccataaatccactggtcttatgggcctgggctggtct 1351

                                                                        
Query: 65   cctgatcaatgccatcaatagcatccccgcaggagagcttgacggcggccgcatagcgct 124
            ||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||  |
Sbjct: 1352 cctgatcaatgccatcaatagcatccctgcaggagagcttgatggcggccgcatagcatt 1411

                               
Query: 125  cgccatgtggggaagaaag 143
             ||||||||||||||||||
Sbjct: 1412 tgccatgtggggaagaaag 1430

>dbj|AK065031.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001G24, full
            insert sequence
          Length = 2054

 Score =  188 bits (95), Expect = 3e-45
 Identities = 128/139 (92%)
 Strand = Plus / Plus

                                                                        
Query: 5    tctaaaagaaggaacacagctatccataaacccactggtattgtgggcttgggctggtct 64
            |||||||||||||||| | ||||||||||| |||||||| || ||||| |||||||||||
Sbjct: 1292 tctaaaagaaggaacaaaactatccataaatccactggtcttatgggcctgggctggtct 1351

                                                                        
Query: 65   cctgatcaatgccatcaatagcatccccgcaggagagcttgacggcggccgcatagcgct 124
            ||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||  |
Sbjct: 1352 cctgatcaatgccatcaatagcatccctgcaggagagcttgatggcggccgcatagcatt 1411

                               
Query: 125  cgccatgtggggaagaaag 143
             ||||||||||||||||||
Sbjct: 1412 tgccatgtggggaagaaag 1430

>dbj|AK062266.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-047-H11, full
           insert sequence
          Length = 1198

 Score =  188 bits (95), Expect = 3e-45
 Identities = 128/139 (92%)
 Strand = Plus / Plus

                                                                       
Query: 5   tctaaaagaaggaacacagctatccataaacccactggtattgtgggcttgggctggtct 64
           |||||||||||||||| | ||||||||||| |||||||| || ||||| |||||||||||
Sbjct: 508 tctaaaagaaggaacaaaactatccataaatccactggtcttatgggcctgggctggtct 567

                                                                       
Query: 65  cctgatcaatgccatcaatagcatccccgcaggagagcttgacggcggccgcatagcgct 124
           ||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||  |
Sbjct: 568 cctgatcaatgccatcaatagcatccctgcaggagagcttgatggcggccgcatagcatt 627

                              
Query: 125 cgccatgtggggaagaaag 143
            ||||||||||||||||||
Sbjct: 628 tgccatgtggggaagaaag 646

>gb|AE012519.1| Xanthomonas campestris pv. campestris str. ATCC 33913,  section 427
            of 460 of the complete genome
          Length = 11384

 Score = 46.1 bits (23), Expect = 0.028
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 108  ggcggccgcatagcgctcgccat 130
            |||||||||||||||||||||||
Sbjct: 7633 ggcggccgcatagcgctcgccat 7655

>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome
          Length = 5148708

 Score = 46.1 bits (23), Expect = 0.028
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                      
Query: 108     ggcggccgcatagcgctcgccat 130
               |||||||||||||||||||||||
Sbjct: 4800697 ggcggccgcatagcgctcgccat 4800719

>gb|AE017180.1| Geobacter sulfurreducens PCA, complete genome
          Length = 3814139

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 87      atccccgcaggagagcttg 105
               |||||||||||||||||||
Sbjct: 1042535 atccccgcaggagagcttg 1042517

>ref|XM_657520.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN5008.2), mRNA
          Length = 348

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 105 gacggcggccgcatagcgc 123
           |||||||||||||||||||
Sbjct: 46  gacggcggccgcatagcgc 64

>gb|AY208501.1| Pomacentrus vaiuli isolate stri-10693 ATP synthase 8 and ATP
           synthase 6 genes, complete cds; mitochondrial genes for
           mitochondrial products
          Length = 842

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 17  aacacagctatccataaac 35
           |||||||||||||||||||
Sbjct: 446 aacacagctatccataaac 464

>gb|AY363759.1| Vidua orientalis aucupum isolate 90.o53 cytochrome oxidase c
           subunit II gene, partial cds; tRNA-Lys gene, complete
           sequence; ATP synthase F0 subunit 8 gene, complete cds;
           and ATP synthase F0 subunit 6 gene, partial cds;
           mitochondrial
          Length = 810

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 18  acacagctatccataaacc 36
           |||||||||||||||||||
Sbjct: 613 acacagctatccataaacc 631

>ref|XM_380969.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG00793.1)
           partial mRNA
          Length = 669

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 122 gctcgccatgtggggaaga 140
           |||||||||||||||||||
Sbjct: 86  gctcgccatgtggggaaga 68

>gb|AC004862.1| Homo sapiens PAC clone RP4-697H17 from 7, complete sequence
          Length = 158811

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 4      ttctaaaagaaggaacaca 22
              |||||||||||||||||||
Sbjct: 124708 ttctaaaagaaggaacaca 124726

>dbj|AB183488.1| Oryzias latipes DNA, MHC class I region
          Length = 540982

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 63     ctcctgatcaatgccatca 81
              |||||||||||||||||||
Sbjct: 502065 ctcctgatcaatgccatca 502083

>gb|AF157253.1|AF157253 Halteromyces radiatus translation elongation factor 1-alpha
           (EF-1alpha) gene, partial cds
          Length = 1422

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 68  gatcaatgccatcaatagcatcc 90
           |||||||| ||||||||||||||
Sbjct: 819 gatcaatggcatcaatagcatcc 797

>gb|AC147212.4| Pan troglodytes BAC clone RP43-126P16 from chromosome 7, complete
             sequence
          Length = 150935

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 4     ttctaaaagaaggaacaca 22
             |||||||||||||||||||
Sbjct: 86857 ttctaaaagaaggaacaca 86839

>gb|AE014299.1| Shewanella oneidensis MR-1, complete genome
          Length = 4969803

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 68      gatcaatgccatcaatagc 86
               |||||||||||||||||||
Sbjct: 1224608 gatcaatgccatcaatagc 1224626


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,224,337
Number of Sequences: 3902068
Number of extensions: 1224337
Number of successful extensions: 84391
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 84261
Number of HSP's gapped (non-prelim): 130
length of query: 144
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 123
effective length of database: 17,151,101,840
effective search space: 2109585526320
effective search space used: 2109585526320
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)