>dbj|AK108378.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-142-E03, full
           insert sequence
          Length = 904

 Score =  172 bits (87), Expect = 5e-40
 Identities = 129/143 (90%)
 Strand = Plus / Plus

                                                                       
Query: 182 ctcacggttctgttcgggtatgctatgccggcgttggagtgcttcaaggcgatcgagcag 241
           |||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 163 ctcacggcgctgttcgggtatgctatgccggcgttggagtgcttcaaggcgatcgagcag 222

                                                                       
Query: 242 cggaccggccggaccgatcagctccggttttggtgccagtattggatcatcctggtcatc 301
           ||| | || ||||| || || ||||||||||||||||| ||||||||||| || || |||
Sbjct: 223 cggcctggtcggacggaccatctccggttttggtgccaatattggatcatactagtaatc 282

                                  
Query: 302 ctggtcatattcgatgaaatcgc 324
           || |||||||||||||| |||||
Sbjct: 283 ctcgtcatattcgatgatatcgc 305

>emb|AL606453.2|OSJN00010 Oryza sativa genomic DNA, chromosome 4, BAC clone: OJ991214_12,
             complete sequence
          Length = 116952

 Score =  135 bits (68), Expect = 1e-28
 Identities = 89/96 (92%)
 Strand = Plus / Plus

                                                                         
Query: 191   ctgttcgggtatgctatgccggcgttggagtgcttcaaggcgatcgagcagcggaccggc 250
             |||||||||||||||||||||||||||||||||||||||||||||||||||||| | || 
Sbjct: 46038 ctgttcgggtatgctatgccggcgttggagtgcttcaaggcgatcgagcagcggcctggt 46097

                                                 
Query: 251   cggaccgatcagctccggttttggtgccagtattgg 286
             ||||| || || ||||||||||||||||| ||||||
Sbjct: 46098 cggacggaccatctccggttttggtgccaatattgg 46133



 Score = 40.1 bits (20), Expect = 5.1
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                     
Query: 285   ggatcatcctggtcatcctggtcatattcgatgaaatcgc 324
             ||||||| || || ||||| |||||||||||||| |||||
Sbjct: 46474 ggatcatactagtaatcctcgtcatattcgatgatatcgc 46513

>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score =  135 bits (68), Expect = 1e-28
 Identities = 89/96 (92%)
 Strand = Plus / Plus

                                                                            
Query: 191      ctgttcgggtatgctatgccggcgttggagtgcttcaaggcgatcgagcagcggaccggc 250
                |||||||||||||||||||||||||||||||||||||||||||||||||||||| | || 
Sbjct: 20535410 ctgttcgggtatgctatgccggcgttggagtgcttcaaggcgatcgagcagcggcctggt 20535469

                                                    
Query: 251      cggaccgatcagctccggttttggtgccagtattgg 286
                ||||| || || ||||||||||||||||| ||||||
Sbjct: 20535470 cggacggaccatctccggttttggtgccaatattgg 20535505



 Score = 40.1 bits (20), Expect = 5.1
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                        
Query: 285      ggatcatcctggtcatcctggtcatattcgatgaaatcgc 324
                ||||||| || || ||||| |||||||||||||| |||||
Sbjct: 20535846 ggatcatactagtaatcctcgtcatattcgatgatatcgc 20535885

>gb|AY111187.1| Zea mays CL7288_1 mRNA sequence
          Length = 1098

 Score =  135 bits (68), Expect = 1e-28
 Identities = 187/224 (83%), Gaps = 2/224 (0%)
 Strand = Plus / Plus

                                                                       
Query: 162 tcgagctgctgacgaaattcctcacggttctgttcgggtatgctatgccggcgttggagt 221
           ||||||| |||||||||||||||||  | |||||||||||||| ||||| ||| ||||||
Sbjct: 137 tcgagctcctgacgaaattcctcacattgctgttcgggtatgccatgccagcgctggagt 196

                                                                       
Query: 222 gcttcaaggcgatcg-agcagcggaccggccggaccgatcagctccggttttggtgccag 280
           ||||||||||||||| | |||||| ||||||||   |||||||||||  | |||||| ||
Sbjct: 197 gcttcaaggcgatcgaaccagcggcccggccgg-gagatcagctccgcgtctggtgcgag 255

                                                                       
Query: 281 tattggatcatcctggtcatcctggtcatattcgatgaaatcgcaggcgccctaatatcg 340
           |||||||||||||| ||| |||| ||||| ||||| ||||| || || |  || || || 
Sbjct: 256 tattggatcatcctagtcctcctcgtcatgttcgacgaaattgctggggttctcatttct 315

                                                       
Query: 341 aggattccgatgtactacgaagtcaagctcgccttcctcgtcta 384
           | ||| || |||||||||||  | ||||| ||||||||||||||
Sbjct: 316 aagatcccaatgtactacgagctgaagctagccttcctcgtcta 359

>ref|XM_472420.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 561

 Score =  109 bits (55), Expect = 7e-21
 Identities = 61/63 (96%)
 Strand = Plus / Plus

                                                                       
Query: 182 ctcacggttctgttcgggtatgctatgccggcgttggagtgcttcaaggcgatcgagcag 241
           |||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 28  ctcacggcgctgttcgggtatgctatgccggcgttggagtgcttcaaggcgatcgagcag 87

              
Query: 242 cgg 244
           |||
Sbjct: 88  cgg 90



 Score = 40.1 bits (20), Expect = 5.1
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                   
Query: 285 ggatcatcctggtcatcctggtcatattcgatgaaatcgc 324
           ||||||| || || ||||| |||||||||||||| |||||
Sbjct: 113 ggatcatactagtaatcctcgtcatattcgatgatatcgc 152

>gb|AC134048.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0076K20, complete sequence
          Length = 127338

 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                             
Query: 182   ctcacggttctgttcgggtatgctatgccggcgttggagtgcttcaag 229
             |||| ||| ||||||||||| || ||||||||||| ||||||||||||
Sbjct: 61007 ctcagggtgctgttcgggtacgccatgccggcgttcgagtgcttcaag 60960

>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 43/48 (89%)
 Strand = Plus / Plus

                                                               
Query: 182     ctcacggttctgttcgggtatgctatgccggcgttggagtgcttcaag 229
               |||| ||| ||||||||||| || ||||||||||| ||||||||||||
Sbjct: 2665791 ctcagggtgctgttcgggtacgccatgccggcgttcgagtgcttcaag 2665838

>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 43/48 (89%)
 Strand = Plus / Plus

                                                               
Query: 182     ctcacggttctgttcgggtatgctatgccggcgttggagtgcttcaag 229
               |||| ||| ||||||||||| || ||||||||||| ||||||||||||
Sbjct: 2674822 ctcagggtgctgttcgggtacgccatgccggcgttcgagtgcttcaag 2674869

>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 36/39 (92%)
 Strand = Plus / Plus

                                                      
Query: 191     ctgttcgggtatgctatgccggcgttggagtgcttcaag 229
               ||||||||||| || ||||||||||| ||||||||||||
Sbjct: 2927363 ctgttcgggtacgcgatgccggcgttcgagtgcttcaag 2927401

>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 36/39 (92%)
 Strand = Plus / Plus

                                                      
Query: 191     ctgttcgggtatgctatgccggcgttggagtgcttcaag 229
               ||||||||||| || ||||||||||| ||||||||||||
Sbjct: 2927307 ctgttcgggtacgcgatgccggcgttcgagtgcttcaag 2927345

>emb|AL844498.4|CNS08CAV Oryza sativa chromosome 12, . BAC OSJNBb0059G18 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 145661

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 36/39 (92%)
 Strand = Plus / Minus

                                                    
Query: 191   ctgttcgggtatgctatgccggcgttggagtgcttcaag 229
             ||||||||||| || ||||||||||| ||||||||||||
Sbjct: 88739 ctgttcgggtacgcgatgccggcgttcgagtgcttcaag 88701

>gb|AY105101.1| Zea mays PCO066358 mRNA sequence
          Length = 764

 Score = 48.1 bits (24), Expect = 0.021
 Identities = 42/48 (87%)
 Strand = Plus / Plus

                                                           
Query: 191 ctgttcgggtatgctatgccggcgttggagtgcttcaaggcgatcgag 238
           |||||||| || || ||||||||||| |||||||||||| || |||||
Sbjct: 355 ctgttcggctacgccatgccggcgttcgagtgcttcaagacggtcgag 402

>gb|CP000089.1| Dechloromonas aromatica RCB, complete genome
          Length = 4501104

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 311     ttcgatgaaatcgcaggcgccc 332
               ||||||||||||||||||||||
Sbjct: 3351668 ttcgatgaaatcgcaggcgccc 3351647

>gb|AC007414.6| Drosophila melanogaster, chromosome 2R, region 46C-46D, BAC clone
             BACR06J01, complete sequence
          Length = 172904

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 42    gggcaggggcggccattatct 62
             |||||||||||||||||||||
Sbjct: 33428 gggcaggggcggccattatct 33448

>gb|AC007413.5|AC007413 Drosophila melanogaster, chromosome 2R, region 46C-46D, BAC clone
              BACR01L01, complete sequence
          Length = 160301

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 42     gggcaggggcggccattatct 62
              |||||||||||||||||||||
Sbjct: 144875 gggcaggggcggccattatct 144895

>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 225    tcaaggcgatcgagcagcggaccgg 249
              |||||||| ||||||||||||||||
Sbjct: 134649 tcaaggcgctcgagcagcggaccgg 134673

>gb|AE003831.3| Drosophila melanogaster chromosome 2R, section 19 of 73 of the complete
              sequence
          Length = 275390

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 42     gggcaggggcggccattatct 62
              |||||||||||||||||||||
Sbjct: 130721 gggcaggggcggccattatct 130741

>gb|U32088.1|DMU32088 Drosophila melanogaster even-skipped (eve) gene, allele Wa-f, 5'
            regulatory region, including stripe 2 enhancer, and
            partial cds
          Length = 2071

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 42   gggcaggggcggccattatct 62
            |||||||||||||||||||||
Sbjct: 993  gggcaggggcggccattatct 1013

>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome
          Length = 4403837

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 230     gcgatcgagcagcggaccgg 249
               ||||||||||||||||||||
Sbjct: 2858586 gcgatcgagcagcggaccgg 2858567

>emb|BX248343.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment
             10/14
          Length = 307550

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 230   gcgatcgagcagcggaccgg 249
             ||||||||||||||||||||
Sbjct: 12395 gcgatcgagcagcggaccgg 12376

>emb|BX842580.1| Mycobacterium tuberculosis H37Rv complete genome; segment 9/13
          Length = 346051

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 230   gcgatcgagcagcggaccgg 249
             ||||||||||||||||||||
Sbjct: 90062 gcgatcgagcagcggaccgg 90043

>gb|AY168010.1| Mus musculus DLX5 protein (Dlx5) gene, partial cds; and Dlx5/Dlx6
            intergenic region, partial sequence
          Length = 10606

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 11   caagtcacaggccacaccaaacacatca 38
            |||||||||| | |||||||||||||||
Sbjct: 7213 caagtcacagactacaccaaacacatca 7186

>gb|CP000252.1| Syntrophus aciditrophicus SB, complete genome
          Length = 3179300

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 42      gggcaggggcggccattatc 61
               ||||||||||||||||||||
Sbjct: 2434486 gggcaggggcggccattatc 2434505

>ref|XM_321016.2| Anopheles gambiae str. PEST ENSANGP00000007830
           (ENSANGG00000005903), partial mRNA
          Length = 2769

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 238 gcagcggaccggccggaccg 257
           ||||||||||||||||||||
Sbjct: 344 gcagcggaccggccggaccg 363

>dbj|AP003171.2| Homo sapiens genomic DNA, chromosome 11q clone:RP11-676F20, complete
              sequence
          Length = 137000

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 13     agtcacaggccacaccaaacacat 36
              ||||||||||||||||||| ||||
Sbjct: 132763 agtcacaggccacaccaaatacat 132740

>dbj|AP002371.3| Homo sapiens genomic DNA, chromosome 11q clone:RP11-183A22,
           complete sequence
          Length = 159441

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 13  agtcacaggccacaccaaacacat 36
           ||||||||||||||||||| ||||
Sbjct: 396 agtcacaggccacaccaaatacat 373

>gb|AC122240.4| Mus musculus BAC clone RP23-145L9 from 6, complete sequence
          Length = 211740

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 11     caagtcacaggccacaccaaacacatca 38
              |||||||||| | |||||||||||||||
Sbjct: 114473 caagtcacagactacaccaaacacatca 114500

>gb|U00090.1| Rhizobium sp. NGR234 plasmid pNGR234a, complete sequence
          Length = 536165

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 286    gatcatcctggtcatcctggtcat 309
              ||||||||||||||||| ||||||
Sbjct: 341381 gatcatcctggtcatcccggtcat 341358


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,882,067
Number of Sequences: 3902068
Number of extensions: 1882067
Number of successful extensions: 32438
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 32236
Number of HSP's gapped (non-prelim): 201
length of query: 384
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 362
effective length of database: 17,147,199,772
effective search space: 6207286317464
effective search space used: 6207286317464
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)