>EF1B_WHEAT (P29546) Elongation factor 1-beta (EF-1-beta) (Elongation factor|
           1B-alpha 2) (eEF-1B alpha) (Elongation factor 1-beta')
           (EF-1-beta')
          Length = 215

 Score =  113 bits (282), Expect = 2e-25
 Identities = 56/71 (78%), Positives = 58/71 (81%)
 Frame = +1

Query: 85  AVTFSDLHSADGLKALEAHLAGKTYISGDAITKDDVKVFAAVPVKPSAEFPNXXXXXXXX 264
           AVTFSDLH+ADGLKALEAHLAGKTYISGD ITKDDVKVFAAVP+KPSAEFPN        
Sbjct: 1   AVTFSDLHTADGLKALEAHLAGKTYISGDGITKDDVKVFAAVPLKPSAEFPNAARWYDTV 60

Query: 265 XXXVSPRFPGQ 297
              VS RFPGQ
Sbjct: 61  AAAVSSRFPGQ 71

>EF1B_ORYSA (P29545) Elongation factor 1-beta (EF-1-beta) (Elongation factor|
           1B-alpha 2) (eEF-1B alpha) (Elongation factor 1-beta')
           (EF-1-beta')
          Length = 223

 Score =  100 bits (248), Expect = 2e-21
 Identities = 46/73 (63%), Positives = 57/73 (78%)
 Frame = +1

Query: 85  AVTFSDLHSADGLKALEAHLAGKTYISGDAITKDDVKVFAAVPVKPSAEFPNXXXXXXXX 264
           AVTF+DLH+ADGLKALE HL+GKTY+SG+AI+KDD+KVFAAVP KP AEFPN        
Sbjct: 1   AVTFTDLHTADGLKALEQHLSGKTYVSGNAISKDDIKVFAAVPSKPGAEFPNAARWYDTV 60

Query: 265 XXXVSPRFPGQXL 303
              ++ RFPG+ +
Sbjct: 61  AAALASRFPGKAV 73

>EF1B2_ARATH (Q9SCX3) Elongation factor 1-beta 2 (EF-1-beta 2) (Elongation|
           factor 1B-alpha 2) (eEF-1B alpha 2) (Elongation factor
           1-beta' 2) (EF-1-beta' 2)
          Length = 224

 Score = 90.1 bits (222), Expect = 2e-18
 Identities = 42/74 (56%), Positives = 54/74 (72%)
 Frame = +1

Query: 82  MAVTFSDLHSADGLKALEAHLAGKTYISGDAITKDDVKVFAAVPVKPSAEFPNXXXXXXX 261
           MAVTFSDLH+ +G+K++E HLAGKTYISGD ++ DDVKV+AAVPVKPS  FPN       
Sbjct: 1   MAVTFSDLHTEEGVKSVEEHLAGKTYISGDQLSVDDVKVYAAVPVKPSDAFPNASKWYES 60

Query: 262 XXXXVSPRFPGQXL 303
               ++  FPG+ +
Sbjct: 61  VASQLAKSFPGKAV 74

>EF1B1_ARATH (Q84WM9) Elongation factor 1-beta 1 (EF-1-beta 1) (Elongation|
           factor 1B-alpha 1) (eEF-1B alpha 1) (Elongation factor
           1-beta' 1) (EF-1-beta' 1)
          Length = 228

 Score = 80.1 bits (196), Expect = 2e-15
 Identities = 40/72 (55%), Positives = 47/72 (65%)
 Frame = +1

Query: 82  MAVTFSDLHSADGLKALEAHLAGKTYISGDAITKDDVKVFAAVPVKPSAEFPNXXXXXXX 261
           MAVTFSDLH+  GLK LE HLAGKTYISGD ++ DDVKV+AAV   P   FPN       
Sbjct: 1   MAVTFSDLHTERGLKTLEEHLAGKTYISGDQLSVDDVKVYAAVLENPGDGFPNASKWYDS 60

Query: 262 XXXXVSPRFPGQ 297
               ++  FPG+
Sbjct: 61  VASHLAKSFPGK 72

>EF1D_BETVU (O81918) Elongation factor 1-delta (EF-1-delta) (Elongation factor|
           1B-beta) (eEF-1B beta)
          Length = 230

 Score = 52.0 bits (123), Expect = 7e-07
 Identities = 26/52 (50%), Positives = 36/52 (69%)
 Frame = +1

Query: 85  AVTFSDLHSADGLKALEAHLAGKTYISGDAITKDDVKVFAAVPVKPSAEFPN 240
           AVTFSDL S  GL +L+A+L  ++YI+G   +KDD+ VF+AVP    A + N
Sbjct: 1   AVTFSDLSSPAGLDSLDAYLLSRSYITGYQASKDDLTVFSAVPKASLASYVN 52

>EF1D2_ARATH (Q9SI20) Elongation factor 1-delta 2 (EF-1-delta 2) (Elongation|
           factor 1B-beta 2) (eEF-1B beta 2)
          Length = 231

 Score = 48.5 bits (114), Expect = 8e-06
 Identities = 22/49 (44%), Positives = 33/49 (67%)
 Frame = +1

Query: 94  FSDLHSADGLKALEAHLAGKTYISGDAITKDDVKVFAAVPVKPSAEFPN 240
           F +L+S  GLK L+ HL  ++YI+G   +KDD+ VF A+   P++EF N
Sbjct: 4   FPNLNSGSGLKKLDEHLLTRSYITGYQASKDDITVFTALSKPPTSEFVN 52

>EF1D_PIMBR (P93447) Elongation factor 1-delta (EF-1-delta) (Elongation factor|
           1B-beta) (eEF-1B beta)
          Length = 225

 Score = 47.8 bits (112), Expect = 1e-05
 Identities = 24/52 (46%), Positives = 35/52 (67%)
 Frame = +1

Query: 85  AVTFSDLHSADGLKALEAHLAGKTYISGDAITKDDVKVFAAVPVKPSAEFPN 240
           AVTF DL S  GL+ L+ +L  ++YISG   +KDD+ V AA+   PS+++ N
Sbjct: 1   AVTFYDLSSEAGLEKLDEYLLSRSYISGYQASKDDLAVHAALAKPPSSKYVN 52

>EF1D2_ORYSA (Q40682) Elongation factor 1-delta 2 (EF-1-delta 2) (Elongation|
           factor 1B-beta 2) (eEF-1B beta 2)
          Length = 225

 Score = 47.0 bits (110), Expect = 2e-05
 Identities = 21/52 (40%), Positives = 36/52 (69%)
 Frame = +1

Query: 85  AVTFSDLHSADGLKALEAHLAGKTYISGDAITKDDVKVFAAVPVKPSAEFPN 240
           A+T S+++S  GL+ L+ +L  ++YISG   +KDD+ VF ++P  P+A + N
Sbjct: 1   AITLSNVNSEAGLQKLDEYLLTRSYISGYQASKDDMTVFTSLPSAPAASYVN 52

>EF1D1_ARATH (P48006) Elongation factor 1-delta 1 (EF-1-delta 1) (Elongation|
           factor 1B-beta 1) (eEF-1B beta 1)
          Length = 231

 Score = 46.2 bits (108), Expect = 4e-05
 Identities = 21/49 (42%), Positives = 34/49 (69%)
 Frame = +1

Query: 94  FSDLHSADGLKALEAHLAGKTYISGDAITKDDVKVFAAVPVKPSAEFPN 240
           F +L+S  GLK L+ HL  ++YI+G   +KDD+ VFAA+   P++++ N
Sbjct: 4   FPNLNSDAGLKKLDEHLLTRSYITGYQASKDDITVFAALAKPPTSQYVN 52

>EF1D1_ORYSA (Q40680) Elongation factor 1-delta 1 (EF-1-delta 1) (Elongation|
           factor 1B-beta 1) (eEF-1B beta 1)
          Length = 228

 Score = 43.5 bits (101), Expect = 2e-04
 Identities = 20/52 (38%), Positives = 34/52 (65%)
 Frame = +1

Query: 85  AVTFSDLHSADGLKALEAHLAGKTYISGDAITKDDVKVFAAVPVKPSAEFPN 240
           AV+F+++ S  GLK L+ +L  ++YISG   + DD+ V++A    PS+ + N
Sbjct: 1   AVSFTNVSSEAGLKKLDEYLLTRSYISGYQASNDDLAVYSAFSTAPSSSYTN 52

>EF1B_DROME (O96827) Probable elongation factor 1-beta (EF-1-beta)|
          Length = 221

 Score = 40.0 bits (92), Expect = 0.003
 Identities = 22/49 (44%), Positives = 29/49 (59%)
 Frame = +1

Query: 94  FSDLHSADGLKALEAHLAGKTYISGDAITKDDVKVFAAVPVKPSAEFPN 240
           F D+ +  GLK L A LA  +YISG   +K D+ VF A+   PSA+  N
Sbjct: 2   FGDVTTPQGLKELNAFLADNSYISGYTPSKADLSVFDALGKAPSADNVN 50

>EF1B_CHICK (Q9YGQ1) Elongation factor 1-beta (EF-1-beta)|
          Length = 224

 Score = 40.0 bits (92), Expect = 0.003
 Identities = 21/46 (45%), Positives = 27/46 (58%)
 Frame = +1

Query: 94  FSDLHSADGLKALEAHLAGKTYISGDAITKDDVKVFAAVPVKPSAE 231
           F DL SA GL+ L   LA K+YI G   ++ D+ VF AV   P A+
Sbjct: 2   FGDLKSAAGLRVLNDFLADKSYIEGYVPSQADIAVFEAVGAPPPAD 47

>EF1B_XENLA (P30151) Elongation factor 1-beta (EF-1-beta) (p30)|
          Length = 226

 Score = 39.3 bits (90), Expect = 0.005
 Identities = 21/46 (45%), Positives = 27/46 (58%)
 Frame = +1

Query: 94  FSDLHSADGLKALEAHLAGKTYISGDAITKDDVKVFAAVPVKPSAE 231
           F DL S  GLK L+  LA K+YI G   ++ DV VF A+   P A+
Sbjct: 2   FGDLKSPAGLKVLKEFLADKSYIEGYVPSQADVAVFDALSAAPPAD 47

>EF1B_HUMAN (P24534) Elongation factor 1-beta (EF-1-beta)|
          Length = 224

 Score = 38.9 bits (89), Expect = 0.006
 Identities = 21/46 (45%), Positives = 27/46 (58%)
 Frame = +1

Query: 94  FSDLHSADGLKALEAHLAGKTYISGDAITKDDVKVFAAVPVKPSAE 231
           F DL S  GL+ L  +LA K+YI G   ++ DV VF AV   P A+
Sbjct: 2   FGDLKSPAGLQVLNDYLADKSYIEGYVPSQADVAVFEAVSSPPPAD 47

>EF1B_RABIT (P34826) Elongation factor 1-beta (EF-1-beta)|
          Length = 224

 Score = 38.5 bits (88), Expect = 0.008
 Identities = 21/46 (45%), Positives = 27/46 (58%)
 Frame = +1

Query: 94  FSDLHSADGLKALEAHLAGKTYISGDAITKDDVKVFAAVPVKPSAE 231
           F DL S  GL+ L  +LA K+YI G   ++ DV VF AV   P A+
Sbjct: 2   FGDLKSPAGLQVLNDYLADKSYIEGYVPSQADVAVFEAVSGPPPAD 47

>EF1B_PIG (P29412) Elongation factor 1-beta (EF-1-beta)|
          Length = 224

 Score = 38.5 bits (88), Expect = 0.008
 Identities = 21/45 (46%), Positives = 26/45 (57%)
 Frame = +1

Query: 94  FSDLHSADGLKALEAHLAGKTYISGDAITKDDVKVFAAVPVKPSA 228
           F DL S  GL+ L  +LA K+YI G   ++ DV VF AV   P A
Sbjct: 2   FGDLKSPAGLQVLNDYLADKSYIEGYVPSQADVAVFEAVSXPPPA 46

>EF1B_BOVIN (Q5E983) Elongation factor 1-beta (EF-1-beta)|
          Length = 224

 Score = 38.5 bits (88), Expect = 0.008
 Identities = 21/46 (45%), Positives = 27/46 (58%)
 Frame = +1

Query: 94  FSDLHSADGLKALEAHLAGKTYISGDAITKDDVKVFAAVPVKPSAE 231
           F DL S  GL+ L  +LA K+YI G   ++ DV VF AV   P A+
Sbjct: 2   FGDLKSPAGLQVLNDYLADKSYIEGYVPSQADVAVFEAVSGPPPAD 47

>EF1B2_BOMMO (P29522) Elongation factor 1-beta'|
          Length = 221

 Score = 38.5 bits (88), Expect = 0.008
 Identities = 19/47 (40%), Positives = 29/47 (61%)
 Frame = +1

Query: 100 DLHSADGLKALEAHLAGKTYISGDAITKDDVKVFAAVPVKPSAEFPN 240
           D+ +A GL  L  +LA K+Y+SG   ++ DV+VF  V   P+A  P+
Sbjct: 4   DVKTAQGLNDLNQYLAEKSYVSGYTPSQADVQVFEQVGKAPAANLPH 50

>EF1B_XENTR (Q6DET9) Elongation factor 1-beta (EF-1-beta)|
          Length = 227

 Score = 37.7 bits (86), Expect = 0.013
 Identities = 21/46 (45%), Positives = 26/46 (56%)
 Frame = +1

Query: 94  FSDLHSADGLKALEAHLAGKTYISGDAITKDDVKVFAAVPVKPSAE 231
           F DL S  GLK L   LA K+YI G   ++ DV VF A+   P A+
Sbjct: 2   FGDLKSPAGLKVLNEFLADKSYIEGYVPSQADVAVFDALSGAPPAD 47

>EF1B_SCHPO (O74173) Elongation factor 1-beta (EF-1-beta)|
          Length = 214

 Score = 37.7 bits (86), Expect = 0.013
 Identities = 23/50 (46%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
 Frame = +1

Query: 94  FSDLHSADGLKALEAHLAGKTYISGDAITKDDVKVFAAVPVKP-SAEFPN 240
           FSDL S  GLK L   L  K++I G   ++ D  VF AV V P +A++PN
Sbjct: 3   FSDLTSDAGLKQLNDFLLDKSFIEGYEPSQADAVVFKAVGVAPDTAKYPN 52

>EF1B_MOUSE (O70251) Elongation factor 1-beta (EF-1-beta)|
          Length = 224

 Score = 37.4 bits (85), Expect = 0.017
 Identities = 20/46 (43%), Positives = 27/46 (58%)
 Frame = +1

Query: 94  FSDLHSADGLKALEAHLAGKTYISGDAITKDDVKVFAAVPVKPSAE 231
           F DL +  GL+ L  +LA K+YI G   ++ DV VF AV   P A+
Sbjct: 2   FGDLKTPAGLQVLNDYLADKSYIEGYVPSQADVAVFEAVSGPPPAD 47

>EF1B_CANAL (P78590) Elongation factor 1-beta (EF-1-beta)|
          Length = 213

 Score = 35.8 bits (81), Expect = 0.050
 Identities = 19/50 (38%), Positives = 27/50 (54%)
 Frame = +1

Query: 88  VTFSDLHSADGLKALEAHLAGKTYISGDAITKDDVKVFAAVPVKPSAEFP 237
           ++FSD    + +K+L   LA K+YI G   T+ DV V+ A       EFP
Sbjct: 1   MSFSDFSKVESIKSLNEFLADKSYIDGTTATQADVTVYKAF----QKEFP 46

>EF1B1_CAEEL (P34460) Probable elongation factor 1-beta/1-delta 1|
           (EF-1-beta/delta 1)
          Length = 213

 Score = 31.2 bits (69), Expect = 1.2
 Identities = 16/49 (32%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
 Frame = +1

Query: 97  SDLHSADGLKALEAHLAGKTYISGDAITKDDVKVFAAVPVKPSAE-FPN 240
           +D+ S  GL A    LA + + +G  ++ +D ++FAA+   P+A  +PN
Sbjct: 3   ADVKSPAGLAAFNTTLAEQAFATGFVLSGEDAQLFAALGSAPNASTYPN 51

>EF1B_ARTSA (P12262) Elongation factor 1-beta (EF-1-beta)|
          Length = 206

 Score = 31.2 bits (69), Expect = 1.2
 Identities = 16/46 (34%), Positives = 25/46 (54%)
 Frame = +1

Query: 100 DLHSADGLKALEAHLAGKTYISGDAITKDDVKVFAAVPVKPSAEFP 237
           DL +  G + L   LA K+Y+ G   +++DV  F  +   PS +FP
Sbjct: 4   DLKAEKGQEQLNELLANKSYLQGYEPSQEDVAAFNQLNKAPSDKFP 49

>SYC_MOUSE (Q9ER72) Cysteinyl-tRNA synthetase (EC 6.1.1.16) (Cysteine--tRNA|
           ligase) (CysRS)
          Length = 831

 Score = 30.0 bits (66), Expect = 2.8
 Identities = 12/35 (34%), Positives = 24/35 (68%)
 Frame = +1

Query: 121 LKALEAHLAGKTYISGDAITKDDVKVFAAVPVKPS 225
           ++AL+ HL+ ++YI G ++++ DV VF  +   P+
Sbjct: 25  VQALDQHLSTRSYIQGYSLSQADVDVFRQLSAPPA 59

>CAD89_DROME (Q9VEU1) Cadherin 89D precursor|
          Length = 2240

 Score = 30.0 bits (66), Expect = 2.8
 Identities = 18/62 (29%), Positives = 29/62 (46%), Gaps = 10/62 (16%)
 Frame = -3

Query: 396  IAEQIHVXH----------HHLHPWKQQEQLQQEIDDALTPEXLAREPRRNSRGNGVVPA 247
            + +Q+H  H          HH +  +QQ Q ++E  D   P+ +A+     S G+G V  
Sbjct: 1988 LEQQLHHHHQQQAMATQQQHHQYLNEQQRQQKREYIDVPLPKSIAKAAAVTSGGDGAVGV 2047

Query: 246  GS 241
            GS
Sbjct: 2048 GS 2049

>GST26_SCHJA (P08515) Glutathione S-transferase 26 kDa (EC 2.5.1.18) (GST 26)|
           (SJ26 antigen) (GST class-mu)
          Length = 217

 Score = 28.9 bits (63), Expect = 6.2
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = +1

Query: 121 LKALEAHLAGKTYISGDAITKDDVKVFAAVPV 216
           LK  E  L  KTY++GD +T  D  ++ A+ V
Sbjct: 129 LKMFEDRLCHKTYLNGDHVTHPDFMLYDALDV 160

>BMP2K_HUMAN (Q9NSY1) BMP-2-inducible protein kinase (EC 2.7.11.1) (BIKe)|
          Length = 1161

 Score = 28.9 bits (63), Expect = 6.2
 Identities = 10/22 (45%), Positives = 16/22 (72%)
 Frame = -3

Query: 390 EQIHVXHHHLHPWKQQEQLQQE 325
           +Q+H+ H H H  +QQ+Q QQ+
Sbjct: 449 QQLHLQHRHPHQQQQQQQQQQQ 470

>RPOC1_PINTH (P52733) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (PEP)|
           (Plastid-encoded RNA polymerase beta' subunit) (RNA
           polymerase beta' subunit)
          Length = 696

 Score = 28.5 bits (62), Expect = 8.1
 Identities = 21/59 (35%), Positives = 29/59 (49%)
 Frame = -3

Query: 345 QEQLQQEIDDALTPEXLAREPRRNSRGNGVVPAGSVWELRAGLHGHCREHLDVVLGDRI 169
           Q +L QE  DAL    + R+P R+S      P  S  ++  G  G  RE+L   LG R+
Sbjct: 339 QTKLIQEAVDALLDNGICRQPMRDSHNR---PYKSFSDVIEGKEGRFRENL---LGKRV 391

>CHS2_HORVU (Q96562) Chalcone synthase 2 (EC 2.3.1.74) (Naringenin-chalcone|
           synthase 2)
          Length = 399

 Score = 28.5 bits (62), Expect = 8.1
 Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
 Frame = -3

Query: 351 KQQEQLQQEIDDALTPEXLAREPRRNSRGNGVVPAGSVWELRA-GLHGHCREHLDVVLGD 175
           K+    QQ      T   LA++   N+RG  V+   S  E+ A    G C+ HLD ++G 
Sbjct: 157 KRLMMYQQGCFGGATVLRLAKDIAENNRGARVLVVCS--EITAMAFRGPCKSHLDSLVGH 214

Query: 174 RIAGD 160
            + GD
Sbjct: 215 ALFGD 219


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 48,462,690
Number of Sequences: 219361
Number of extensions: 803840
Number of successful extensions: 2832
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 2640
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2783
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2735358828
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)