>NCOR1_MOUSE (Q60974) Nuclear receptor corepressor 1 (N-CoR1) (N-CoR) (Retinoid X|
            receptor-interacting protein 13) (RIP13)
          Length = 2453

 Score = 36.6 bits (83), Expect = 0.048
 Identities = 16/49 (32%), Positives = 28/49 (57%)
 Frame = -1

Query: 500  SEVPLGKAPGGMLQHDCSSGGSVVYEGNLGHVPSVDKGRDGCAGTAEPR 354
            S +P+ ++    ++ + +S G V+YEG  GH+ S D  ++   GT  PR
Sbjct: 1199 SRMPIEESSPEKVREEAASKGHVIYEGKSGHILSYDNIKNAREGTRSPR 1247

>NCOR1_HUMAN (O75376) Nuclear receptor corepressor 1 (N-CoR1) (N-CoR)|
          Length = 2440

 Score = 33.9 bits (76), Expect = 0.31
 Identities = 16/49 (32%), Positives = 26/49 (53%)
 Frame = -1

Query: 500  SEVPLGKAPGGMLQHDCSSGGSVVYEGNLGHVPSVDKGRDGCAGTAEPR 354
            S +P+  +     + + +S G V+YEG  GH+ S D  ++   GT  PR
Sbjct: 1188 SRMPIEDSSPEKGREEAASKGHVIYEGKSGHILSYDNIKNAREGTRSPR 1236

>NCOR1_XENLA (Q8QG78) Nuclear receptor corepressor 1 (N-CoR1) (N-CoR) (xN-CoR)|
          Length = 2498

 Score = 33.1 bits (74), Expect = 0.53
 Identities = 15/36 (41%), Positives = 21/36 (58%)
 Frame = -1

Query: 461  QHDCSSGGSVVYEGNLGHVPSVDKGRDGCAGTAEPR 354
            + D S+ G V+YEG  GH+ S D  ++   GT  PR
Sbjct: 1260 REDTSAKGHVIYEGKSGHIVSYDTIKNMREGTRSPR 1295

>EVX1_MOUSE (P23683) Homeobox even-skipped homolog protein 1 (EVX-1)|
          Length = 416

 Score = 32.0 bits (71), Expect = 1.2
 Identities = 15/37 (40%), Positives = 21/37 (56%)
 Frame = -1

Query: 545 DCSIGVMEHEHSVAPSEVPLGKAPGGMLQHDCSSGGS 435
           DC+ G  E++HS AP    LG +P    +   S+GGS
Sbjct: 130 DCATGNAEYQHSKAPGSDALGSSPTSGSEAPKSNGGS 166

>CEFD_STRCL (P18549) Isopenicillin N epimerase (EC 5.1.1.17)|
          Length = 397

 Score = 30.0 bits (66), Expect = 4.5
 Identities = 21/78 (26%), Positives = 29/78 (37%)
 Frame = +3

Query: 225 DPAVARVNNGSFGCCPASVLEAQARWQRLFLAQPDAFYFDGLQPGXXXXXXXXXXXXXXG 404
           DP V  +N GS G  P S  E    ++    A+P  F    + P               G
Sbjct: 15  DPTVVNLNTGSGGPLPRSAFERVTGFRAHLAAEPMDFLLREV-PALLWQARESLARLIGG 73

Query: 405 DVSEISLVDNATTAAAIV 458
           D   ++L  N T A  +V
Sbjct: 74  DPLRLALATNVTAAVNLV 91

>KCNH4_HUMAN (Q9UQ05) Potassium voltage-gated channel subfamily H member 4|
            (Voltage-gated potassium channel subunit Kv12.3)
            (Ether-a-go-go-like potassium channel 1) (ELK channel 1)
            (ELK1) (Brain-specific eag-like channel 2) (BEC2)
          Length = 1017

 Score = 29.3 bits (64), Expect = 7.7
 Identities = 19/54 (35%), Positives = 24/54 (44%)
 Frame = +1

Query: 379  PSRPLSTLGTCPRFPS*TTLPPLLQSCCSMPPGALPRGTSLGATLCSCSITPME 540
            P  P  +  T P  P     PP L  C S PP +L + T+L    C  S+  ME
Sbjct: 915  PGHPAGSAWT-PDPPCPQLRPPCLSPCASRPPPSL-QDTTLAEVHCPASVGTME 966

>INHA_PIG (P04087) Inhibin alpha chain precursor|
          Length = 364

 Score = 29.3 bits (64), Expect = 7.7
 Identities = 15/42 (35%), Positives = 19/42 (45%)
 Frame = +1

Query: 358 GSAVPAQPSRPLSTLGTCPRFPS*TTLPPLLQSCCSMPPGAL 483
           G  +P  P+ PLS  G  P       L P  Q CC+  PG +
Sbjct: 292 GCGLPTLPNLPLSVPGAPPTPVQPLLLVPGAQPCCAALPGTM 333


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 48,173,812
Number of Sequences: 219361
Number of extensions: 762933
Number of successful extensions: 2585
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2513
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2584
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4430660157
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)