ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal25i16 |
|---|---|
| Clone Library Name | barley_pub |
>1A1D_PYRHO (O57809) Putative 1-aminocyclopropane-1-carboxylate deaminase (EC| 3.5.99.7) (ACC deaminase) Length = 325 Score = 40.0 bits (92), Expect = 0.002 Identities = 16/25 (64%), Positives = 22/25 (88%) Frame = +2 Query: 110 GTEVWIKRDDLSGMQLSGNKVRKLE 184 G +V+IKRDDL+G+ + GNK+RKLE Sbjct: 35 GADVYIKRDDLTGLGIGGNKIRKLE 59
>1A1D_PYRAB (Q9V2L2) Putative 1-aminocyclopropane-1-carboxylate deaminase (EC| 3.5.99.7) (ACC deaminase) Length = 330 Score = 39.7 bits (91), Expect = 0.002 Identities = 15/25 (60%), Positives = 22/25 (88%) Frame = +2 Query: 110 GTEVWIKRDDLSGMQLSGNKVRKLE 184 G +V++KRDDL+G+ + GNK+RKLE Sbjct: 35 GVDVYVKRDDLTGLGIGGNKIRKLE 59
>1A1D_PYRFU (Q8U4R3) Putative 1-aminocyclopropane-1-carboxylate deaminase (EC| 3.5.99.7) (ACC deaminase) Length = 329 Score = 39.3 bits (90), Expect = 0.003 Identities = 14/25 (56%), Positives = 22/25 (88%) Frame = +2 Query: 110 GTEVWIKRDDLSGMQLSGNKVRKLE 184 G ++++KRDDL+G+ + GNK+RKLE Sbjct: 35 GADIYVKRDDLTGLGIGGNKIRKLE 59
>DCYD_ECOLI (P76316) D-cysteine desulfhydrase (EC 4.4.1.15)| Length = 327 Score = 36.6 bits (83), Expect = 0.019 Identities = 15/25 (60%), Positives = 21/25 (84%) Frame = +2 Query: 110 GTEVWIKRDDLSGMQLSGNKVRKLE 184 G E++IKRDD++ M + GNK+RKLE Sbjct: 31 GREIFIKRDDVTPMAMGGNKLRKLE 55
>DCYD_ECOL6 (P59329) D-cysteine desulfhydrase (EC 4.4.1.15)| Length = 327 Score = 36.6 bits (83), Expect = 0.019 Identities = 15/25 (60%), Positives = 21/25 (84%) Frame = +2 Query: 110 GTEVWIKRDDLSGMQLSGNKVRKLE 184 G E++IKRDD++ M + GNK+RKLE Sbjct: 31 GREIFIKRDDVTPMAMGGNKLRKLE 55
>DCYD_ECO57 (Q8XBC7) D-cysteine desulfhydrase (EC 4.4.1.15)| Length = 327 Score = 36.6 bits (83), Expect = 0.019 Identities = 15/25 (60%), Positives = 21/25 (84%) Frame = +2 Query: 110 GTEVWIKRDDLSGMQLSGNKVRKLE 184 G E++IKRDD++ M + GNK+RKLE Sbjct: 31 GREIFIKRDDVTPMAMGGNKLRKLE 55
>DCYD_YERPE (Q8ZF73) D-cysteine desulfhydrase (EC 4.4.1.15)| Length = 330 Score = 36.2 bits (82), Expect = 0.025 Identities = 15/25 (60%), Positives = 21/25 (84%) Frame = +2 Query: 110 GTEVWIKRDDLSGMQLSGNKVRKLE 184 G E++IKRDD++ + L GNK+RKLE Sbjct: 33 GREIYIKRDDVTPVALGGNKLRKLE 57
>DCYD_SALTY (Q8ZNT7) D-cysteine desulfhydrase (EC 4.4.1.15)| Length = 327 Score = 35.4 bits (80), Expect = 0.042 Identities = 14/25 (56%), Positives = 21/25 (84%) Frame = +2 Query: 110 GTEVWIKRDDLSGMQLSGNKVRKLE 184 G E++IKRDD++ + + GNK+RKLE Sbjct: 31 GREIYIKRDDVTPIAMGGNKLRKLE 55
>DCYD_SALTI (Q8Z5S9) D-cysteine desulfhydrase (EC 4.4.1.15)| Length = 327 Score = 35.4 bits (80), Expect = 0.042 Identities = 14/25 (56%), Positives = 21/25 (84%) Frame = +2 Query: 110 GTEVWIKRDDLSGMQLSGNKVRKLE 184 G E++IKRDD++ + + GNK+RKLE Sbjct: 31 GREIYIKRDDVTPIAMGGNKLRKLE 55
>DCYD_SHIFL (P59330) D-cysteine desulfhydrase (EC 4.4.1.15)| Length = 327 Score = 35.0 bits (79), Expect = 0.055 Identities = 14/25 (56%), Positives = 21/25 (84%) Frame = +2 Query: 110 GTEVWIKRDDLSGMQLSGNKVRKLE 184 G E++IKRD+++ M + GNK+RKLE Sbjct: 31 GREIFIKRDEVTPMAMGGNKLRKLE 55
>1A1D_THEMA (Q9WY68) Putative 1-aminocyclopropane-1-carboxylate deaminase (EC| 3.5.99.7) (ACC deaminase) Length = 312 Score = 34.3 bits (77), Expect = 0.094 Identities = 14/27 (51%), Positives = 21/27 (77%) Frame = +2 Query: 104 RXGTEVWIKRDDLSGMQLSGNKVRKLE 184 + G +++KRDDL+ + SGNK+RKLE Sbjct: 21 KYGFNIYVKRDDLTELVGSGNKIRKLE 47
>1A1D_AGRTU (Q9AHF0) 1-aminocyclopropane-1-carboxylate deaminase (EC 3.5.99.7)| (ACC deaminase) (ACCD) Length = 337 Score = 32.7 bits (73), Expect = 0.27 Identities = 14/24 (58%), Positives = 19/24 (79%), Gaps = 1/24 (4%) Frame = +2 Query: 116 EVWIKRDDL-SGMQLSGNKVRKLE 184 E+W KR+D SG+ + GNK+RKLE Sbjct: 32 EIWAKREDCNSGLAMGGNKLRKLE 55
>1A1D_RHILV (Q93AG0) 1-aminocyclopropane-1-carboxylate deaminase (EC 3.5.99.7)| (ACC deaminase) (ACCD) Length = 339 Score = 29.6 bits (65), Expect = 2.3 Identities = 13/24 (54%), Positives = 19/24 (79%), Gaps = 1/24 (4%) Frame = +2 Query: 116 EVWIKRDDL-SGMQLSGNKVRKLE 184 +++ KRDD SG+ + GNK+RKLE Sbjct: 34 DIYAKRDDCNSGLAMGGNKLRKLE 57
>1A1D_SCHPO (Q9URX3) Probable 1-aminocyclopropane-1-carboxylate deaminase (EC| 3.5.99.7) (ACC deaminase) (ACCD) Length = 338 Score = 28.9 bits (63), Expect = 3.9 Identities = 13/24 (54%), Positives = 18/24 (75%), Gaps = 1/24 (4%) Frame = +2 Query: 116 EVWIKRDDL-SGMQLSGNKVRKLE 184 E++ KR+D SG+ GNK+RKLE Sbjct: 33 EIFAKREDCNSGLAFGGNKIRKLE 56
>1A1D_BURPS (Q63KN7) 1-aminocyclopropane-1-carboxylate deaminase (EC 3.5.99.7)| (ACC deaminase) (ACCD) Length = 338 Score = 28.9 bits (63), Expect = 3.9 Identities = 14/24 (58%), Positives = 17/24 (70%), Gaps = 1/24 (4%) Frame = +2 Query: 116 EVWIKRDDL-SGMQLSGNKVRKLE 184 E++ KRDD SG+ GNK RKLE Sbjct: 33 ELYAKRDDCNSGLAFGGNKTRKLE 56
>1A1D_BURMA (Q62CE3) 1-aminocyclopropane-1-carboxylate deaminase (EC 3.5.99.7)| (ACC deaminase) (ACCD) Length = 338 Score = 28.9 bits (63), Expect = 3.9 Identities = 14/24 (58%), Positives = 17/24 (70%), Gaps = 1/24 (4%) Frame = +2 Query: 116 EVWIKRDDL-SGMQLSGNKVRKLE 184 E++ KRDD SG+ GNK RKLE Sbjct: 33 ELYAKRDDCNSGLAFGGNKTRKLE 56
>1A1D_RHILO (Q98AM7) 1-aminocyclopropane-1-carboxylate deaminase (EC 3.5.99.7)| (ACC deaminase) (ACCD) Length = 337 Score = 28.5 bits (62), Expect = 5.1 Identities = 13/24 (54%), Positives = 18/24 (75%), Gaps = 1/24 (4%) Frame = +2 Query: 116 EVWIKRDDL-SGMQLSGNKVRKLE 184 E++ KR+D SG+ GNK+RKLE Sbjct: 32 EIYAKREDCNSGLAFGGNKLRKLE 55
>1A1D_BRAJA (Q89XR6) 1-aminocyclopropane-1-carboxylate deaminase (EC 3.5.99.7)| (ACC deaminase) (ACCD) Length = 337 Score = 28.1 bits (61), Expect = 6.7 Identities = 13/24 (54%), Positives = 18/24 (75%), Gaps = 1/24 (4%) Frame = +2 Query: 116 EVWIKRDDL-SGMQLSGNKVRKLE 184 E++ KR+D SG+ GNK+RKLE Sbjct: 32 EIYAKREDCNSGLAYGGNKLRKLE 55 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 24,823,980 Number of Sequences: 219361 Number of extensions: 391677 Number of successful extensions: 1050 Number of sequences better than 10.0: 18 Number of HSP's better than 10.0 without gapping: 1041 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1050 length of database: 80,573,946 effective HSP length: 36 effective length of database: 72,676,950 effective search space used: 1744246800 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
