ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal25i15 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_475752.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1173 Score = 327 bits (165), Expect = 2e-86 Identities = 278/315 (88%), Gaps = 3/315 (0%) Strand = Plus / Plus Query: 90 gaagaaaaggaagaggataatgagatgactcttgatgaatttgagaaagtaatggaggag 149 |||||||||||||||||||| || ||||||||||| || ||||||||| ||| ||||||| Sbjct: 742 gaagaaaaggaagaggataaggaaatgactcttgaggagtttgagaaattaagggaggag 801 Query: 150 aagaggaaagcacttgatgctttgaagaagtctgaagagaggaaggtcgaaattgataag 209 ||||||||||||||| | ||||||||| |||||||||||||||| |||||||| ||| Sbjct: 802 aagaggaaagcacttctttctttgaaga---ctgaagagaggaaggttgaaattgacaag 858 Query: 210 gatcttcaggctatgcaactactttccaccaagaaaggaaatgatgaggttttcatcaaa 269 ||| | || ||||||||| |||||||| ||||||| ||||||||| |||||||||||| Sbjct: 859 gatttgaagtctatgcaaccactttccaataagaaagaaaatgatgaagttttcatcaaa 918 Query: 270 ctgggtgctgataaggaggctttgaagaagaaagagaatgctgaacgtgaagagcgtgct 329 ||||| |||| ||||| ||||||||||||||||| |||||||||||||| ||||||||| Sbjct: 919 ctgggatctgacaaggatgctttgaagaagaaagaaaatgctgaacgtgatgagcgtgct 978 Query: 330 aagaagtctgtgagcatcaacgagttcctgaagcctgctgaaggagaaaggttctatggt 389 ||||||||||||||||||||||||||||| || || ||||||||||| |||| |||||| Sbjct: 979 aagaagtctgtgagcatcaacgagttcctaaaaccagctgaaggagagaggtactatggc 1038 Query: 390 ggccgaggccgtggc 404 ||||| || |||||| Sbjct: 1039 ggccgtggtcgtggc 1053
>dbj|AK067806.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013119G19, full insert sequence Length = 1091 Score = 319 bits (161), Expect = 4e-84 Identities = 277/315 (87%), Gaps = 3/315 (0%) Strand = Plus / Plus Query: 90 gaagaaaaggaagaggataatgagatgactcttgatgaatttgagaaagtaatggaggag 149 |||||||||||||||||||| || ||||||||||| || ||||||||| ||| ||||||| Sbjct: 433 gaagaaaaggaagaggataaggaaatgactcttgaggagtttgagaaattaagggaggag 492 Query: 150 aagaggaaagcacttgatgctttgaagaagtctgaagagaggaaggtcgaaattgataag 209 ||||||||||||||| | ||||||||| |||||||||||||||| |||||||| || Sbjct: 493 aagaggaaagcacttctttctttgaaga---ctgaagagaggaaggttgaaattgacaaa 549 Query: 210 gatcttcaggctatgcaactactttccaccaagaaaggaaatgatgaggttttcatcaaa 269 ||| | || ||||||||| |||||||| ||||||| ||||||||| |||||||||||| Sbjct: 550 gatttgaagtctatgcaaccactttccaataagaaagaaaatgatgaagttttcatcaaa 609 Query: 270 ctgggtgctgataaggaggctttgaagaagaaagagaatgctgaacgtgaagagcgtgct 329 ||||| |||| ||||| ||||||||||||||||| |||||||||||||| ||||||||| Sbjct: 610 ctgggatctgacaaggatgctttgaagaagaaagaaaatgctgaacgtgatgagcgtgct 669 Query: 330 aagaagtctgtgagcatcaacgagttcctgaagcctgctgaaggagaaaggttctatggt 389 ||||||||||||||||||||||||||||| || || ||||||||||| |||| |||||| Sbjct: 670 aagaagtctgtgagcatcaacgagttcctaaaaccagctgaaggagagaggtactatggc 729 Query: 390 ggccgaggccgtggc 404 ||||| || |||||| Sbjct: 730 ggccgtggtcgtggc 744
>ref|NM_191814.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1143 Score = 228 bits (115), Expect = 1e-56 Identities = 278/332 (83%), Gaps = 9/332 (2%) Strand = Plus / Plus Query: 72 ggtgctgcagttgtggaagaagaaaaggaagaggataatgagatgactcttgatgaattt 131 ||||||||| || ||||||||| |||||||||||||| |||||||||||||| || ||| Sbjct: 691 ggtgctgcaaatgaggaagaagagaaggaagaggataaggagatgactcttgaggagttt 750 Query: 132 gagaaagtaatggaggagaagaggaaagcacttgatgctttgaagaagtctgaagagagg 191 |||||| ||| |||||| ||| ||||||| ||| |||||| ||| ||||||||||| Sbjct: 751 gagaaattaagggaggaaaagcggaaagctcttcttgcttt---caaggctgaagagagg 807 Query: 192 aaggtcgaaattgataaggatcttcaggctatgcaactactttccaccaagaaaggaaat 251 ||||| || | |||||||| || ||| ||||||| | |||||| ||||||||||||||| Sbjct: 808 aaggttgaggtcgataaggacctgcagtctatgcagccactttctaccaagaaaggaaat 867 Query: 252 gatgaggttttcatcaaactgggtgctgataaggaggctttgaagaagaaagagaatgct 311 ||||| ||||||| || |||||| |||| ||||| |||||||| || |||||| Sbjct: 868 gatgaaattttcattaagctgggttctgacaagga------taagaagaaggaaaatgct 921 Query: 312 gaacgtgaagagcgtgctaagaagtctgtgagcatcaacgagttcctgaagcctgctgaa 371 || || || |||||||| |||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 922 gagcgcgatgagcgtgccaagaagtctgtgagcatcaatgagttcctgaagcctgcggaa 981 Query: 372 ggagaaaggttctatggtggccgaggccgtgg 403 |||||||||| |||||| ||||| || ||||| Sbjct: 982 ggagaaaggtactatggcggccgtggtcgtgg 1013
>dbj|AK121001.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023044L15, full insert sequence Length = 1611 Score = 220 bits (111), Expect = 3e-54 Identities = 277/332 (83%), Gaps = 9/332 (2%) Strand = Plus / Plus Query: 72 ggtgctgcagttgtggaagaagaaaaggaagaggataatgagatgactcttgatgaattt 131 ||||||||| || ||||||||| |||||||||||||| |||||||||||||| || ||| Sbjct: 927 ggtgctgcaaatgaggaagaagagaaggaagaggataaggagatgactcttgaggagttt 986 Query: 132 gagaaagtaatggaggagaagaggaaagcacttgatgctttgaagaagtctgaagagagg 191 |||||| ||| |||||| ||| ||||||| ||| |||||| ||| ||||||||||| Sbjct: 987 gagaaattaagggaggaaaagcggaaagctcttcttgcttt---caaggctgaagagagg 1043 Query: 192 aaggtcgaaattgataaggatcttcaggctatgcaactactttccaccaagaaaggaaat 251 ||||| || | |||||||| || ||| ||||||| | |||||| ||||||||||||||| Sbjct: 1044 aaggttgaggtcgataaggacctgcagtctatgcagccactttctaccaagaaaggaaat 1103 Query: 252 gatgaggttttcatcaaactgggtgctgataaggaggctttgaagaagaaagagaatgct 311 ||||| ||||||| || |||||| |||| ||||| ||||||| || |||||| Sbjct: 1104 gatgaaattttcattaagctgggttctgacaagga------taagaagagggaaaatgct 1157 Query: 312 gaacgtgaagagcgtgctaagaagtctgtgagcatcaacgagttcctgaagcctgctgaa 371 || || || |||||||| |||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 1158 gagcgcgatgagcgtgccaagaagtctgtgagcatcaatgagttcctgaagcctgcggaa 1217 Query: 372 ggagaaaggttctatggtggccgaggccgtgg 403 |||||||||| |||||| ||||| || ||||| Sbjct: 1218 ggagaaaggtactatggcggccgtggtcgtgg 1249
>gb|BT016648.1| Zea mays clone Contig481 mRNA sequence Length = 1556 Score = 210 bits (106), Expect = 3e-51 Identities = 296/359 (82%), Gaps = 9/359 (2%) Strand = Plus / Plus Query: 45 gcagatgagaacaaggccagcaaagatggtgctgcagttgtggaagaagaaaaggaagag 104 |||||||||||||| | | ||| |||| | ||||| || ||| ||||||||||||||| Sbjct: 849 gcagatgagaacaaagataacaaggatgctactgcaaatgaggaggaagaaaaggaagag 908 Query: 105 gataatgagatgactcttgatgaatttgagaaagtaatggaggagaagaggaaagcactt 164 || || ||||||||||| || |||||||||||| ||| |||||||||||||||||||| Sbjct: 909 gacaaggagatgactctggaggaatttgagaaaataagagaggagaagaggaaagcacta 968 Query: 165 gatgctttgaagaagtctgaagagaggaaggtcgaaattgataaggatcttcaggctatg 224 ||| |||||| |||| |||||||| || ||| |||| |||||| | ||| || || Sbjct: 969 cttgcattgaagg---ctgaggagaggaaagttgaagttgacaaggatttgcagtctctg 1025 Query: 225 caactactttccaccaagaaaggaaatgatgaggttttcatcaaactgggtgctgataag 284 || | |||||| | |||||||| ||||||||| |||||||| || |||||| |||| ||| Sbjct: 1026 cagccactttcaaacaagaaagaaaatgatgaagttttcattaagctgggttctgacaag 1085 Query: 285 gaggctttgaagaagaaagagaatgctgaacgtgaagagcgtgctaagaagtctgtgagc 344 || |||||||| || |||||||| ||||| |||||||| |||||||| |||||| Sbjct: 1086 gat------aagaagaaggaaaatgctgagcgtgatgagcgtgccaagaagtcggtgagc 1139 Query: 345 atcaacgagttcctgaagcctgctgaaggagaaaggttctatggtggccgaggccgtgg 403 ||||||||||||||||| ||||||||||||||||||| ||| || ||||| |||||||| Sbjct: 1140 atcaacgagttcctgaaacctgctgaaggagaaaggtactacggcggccgtggccgtgg 1198
>gb|AY103606.1| Zea mays PCO150737 mRNA sequence Length = 1811 Score = 210 bits (106), Expect = 3e-51 Identities = 296/359 (82%), Gaps = 9/359 (2%) Strand = Plus / Plus Query: 45 gcagatgagaacaaggccagcaaagatggtgctgcagttgtggaagaagaaaaggaagag 104 |||||||||||||| | | ||| |||| | ||||| || ||| ||||||||||||||| Sbjct: 1086 gcagatgagaacaaagataacaaggatgctactgcaaatgaggaggaagaaaaggaagag 1145 Query: 105 gataatgagatgactcttgatgaatttgagaaagtaatggaggagaagaggaaagcactt 164 || || ||||||||||| || |||||||||||| ||| |||||||||||||||||||| Sbjct: 1146 gacaaggagatgactctggaggaatttgagaaaataagagaggagaagaggaaagcacta 1205 Query: 165 gatgctttgaagaagtctgaagagaggaaggtcgaaattgataaggatcttcaggctatg 224 ||| |||||| |||| |||||||| || ||| |||| |||||| | ||| || || Sbjct: 1206 cttgcattgaagg---ctgaggagaggaaagttgaagttgacaaggatttgcagtctctg 1262 Query: 225 caactactttccaccaagaaaggaaatgatgaggttttcatcaaactgggtgctgataag 284 || | |||||| | |||||||| ||||||||| |||||||| || |||||| |||| ||| Sbjct: 1263 cagccactttcaaacaagaaagaaaatgatgaagttttcattaagctgggttctgacaag 1322 Query: 285 gaggctttgaagaagaaagagaatgctgaacgtgaagagcgtgctaagaagtctgtgagc 344 || |||||||| || |||||||| ||||| |||||||| |||||||| |||||| Sbjct: 1323 gat------aagaagaaggaaaatgctgagcgtgatgagcgtgccaagaagtcggtgagc 1376 Query: 345 atcaacgagttcctgaagcctgctgaaggagaaaggttctatggtggccgaggccgtgg 403 ||||||||||||||||| ||||||||||||||||||| ||| || ||||| |||||||| Sbjct: 1377 atcaacgagttcctgaaacctgctgaaggagaaaggtactacggcggccgtggccgtgg 1435
>gb|BT019307.1| Zea mays clone Contig980.F mRNA sequence Length = 869 Score = 194 bits (98), Expect = 2e-46 Identities = 294/359 (81%), Gaps = 9/359 (2%) Strand = Plus / Plus Query: 45 gcagatgagaacaaggccagcaaagatggtgctgcagttgtggaagaagaaaaggaagag 104 |||||||||||||| | | ||| |||| | ||||| || ||| ||||||||||||||| Sbjct: 185 gcagatgagaacaaagataacaaggatgctactgcaaatgaggaggaagaaaaggaagag 244 Query: 105 gataatgagatgactcttgatgaatttgagaaagtaatggaggagaagaggaaagcactt 164 || || |||||| |||| || |||||||||||| ||| |||||||||||||||||||| Sbjct: 245 gacaaggagatgcctctggaggaatttgagaaaataagagaggagaagaggaaagcacta 304 Query: 165 gatgctttgaagaagtctgaagagaggaaggtcgaaattgataaggatcttcaggctatg 224 ||| |||||| |||| |||||||| || ||| |||| |||||||| | || || Sbjct: 305 cttgcgttgaagg---ctgaggagaggaaagttgaagttgacaaggatctgcgttctctg 361 Query: 225 caactactttccaccaagaaaggaaatgatgaggttttcatcaaactgggtgctgataag 284 || | |||||| | |||||||| ||||||||| |||||||| || |||||| |||| ||| Sbjct: 362 cagccactttcaaacaagaaagaaaatgatgaagttttcattaagctgggttctgacaag 421 Query: 285 gaggctttgaagaagaaagagaatgctgaacgtgaagagcgtgctaagaagtctgtgagc 344 || |||||||| || |||||||| ||||| |||||||| |||||||| |||||| Sbjct: 422 gat------aagaagaaggaaaatgctgagcgtgatgagcgtgccaagaagtcggtgagc 475 Query: 345 atcaacgagttcctgaagcctgctgaaggagaaaggttctatggtggccgaggccgtgg 403 ||||||||||||||||| ||||||||||||||||||| ||| || ||||| |||||||| Sbjct: 476 atcaacgagttcctgaaacctgctgaaggagaaaggtactacggcggccgtggccgtgg 534
>gb|AF113521.1|AF113521 Zea mays putative transcription factor mRNA sequence Length = 1212 Score = 194 bits (98), Expect = 2e-46 Identities = 262/315 (83%), Gaps = 10/315 (3%) Strand = Plus / Plus Query: 90 gaagaaaaggaagaggataatgagatgactcttgatgaatttgagaaagtaatggaggag 149 ||||||||||||||||| || ||||||||||| || |||||||||||| ||| |||||| Sbjct: 600 gaagaaaaggaagaggacaaggagatgactctggaggaatttgagaaaataagagaggag 659 Query: 150 aagaggaaagcacttgatgctttgaagaagtctgaagagaggaaggtcgaaattgataag 209 |||||||||||||| ||| |||||| |||| |||||||| || ||| |||| ||| Sbjct: 660 aagaggaaagcactacttgcattgaagg---ctgaggagaggaaagttgaagttgacaag 716 Query: 210 gatcttcaggctatgcaactactttccaccaagaaaggaaatgatgaggttttcatcaaa 269 ||| | ||| || |||| | |||||| | |||||||| ||||||||| |||||||| || Sbjct: 717 gatttgcagtctctgcagccactttcaaacaagaaagaaaatgatgaagttttcattaag 776 Query: 270 ctgggtgctgataaggaggctttgaagaagaaagagaatgct-gaacgtgaagagcgtgc 328 |||||| |||| ||||| |||||||| || |||||| || ||||| |||||||| Sbjct: 777 ctgggttctgacaaggat------aagaagaaggaaaatgcttgagcgtgatgagcgtgc 830 Query: 329 taagaagtctgtgagcatcaacgagttcctgaagcctgctgaaggagaaaggttctatgg 388 |||||||| ||||||||||||||||||||||| ||||||||||||||||||| ||| || Sbjct: 831 caagaagtcggtgagcatcaacgagttcctgaaacctgctgaaggagaaaggtactacgg 890 Query: 389 tggccgaggccgtgg 403 ||||| |||||||| Sbjct: 891 cggccgtggccgtgg 905
>dbj|AK059581.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-030-B03, full insert sequence Length = 501 Score = 167 bits (84), Expect = 4e-38 Identities = 188/223 (84%), Gaps = 6/223 (2%) Strand = Plus / Plus Query: 181 ctgaagagaggaaggtcgaaattgataaggatcttcaggctatgcaactactttccacca 240 |||||||||||||||| || | |||||||| || ||| ||||||| | |||||| |||| Sbjct: 13 ctgaagagaggaaggttgaggtcgataaggacctgcagtctatgcagccactttctacca 72 Query: 241 agaaaggaaatgatgaggttttcatcaaactgggtgctgataaggaggctttgaagaaga 300 |||||||||||||||| ||||||| || |||||| |||| ||||| ||||||| Sbjct: 73 agaaaggaaatgatgaaattttcattaagctgggttctgacaaggat------aagaaga 126 Query: 301 aagagaatgctgaacgtgaagagcgtgctaagaagtctgtgagcatcaacgagttcctga 360 | || |||||||| || || |||||||| |||||||||||||||||||| |||||||||| Sbjct: 127 aggaaaatgctgagcgcgatgagcgtgccaagaagtctgtgagcatcaatgagttcctga 186 Query: 361 agcctgctgaaggagaaaggttctatggtggccgaggccgtgg 403 ||||||| ||||||||||||| |||||| ||||| || ||||| Sbjct: 187 agcctgcggaaggagaaaggtactatggcggccgtggtcgtgg 229
>gb|AC121365.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0053E05, complete sequence Length = 196284 Score = 147 bits (74), Expect = 3e-32 Identities = 139/160 (86%), Gaps = 3/160 (1%) Strand = Plus / Plus Query: 114 atgactcttgatgaatttgagaaagtaatggaggagaagaggaaagcacttgatgctttg 173 ||||||||||| || ||||||||| ||| |||||||||||||||||||||| | ||||| Sbjct: 110407 atgactcttgaggagtttgagaaattaagggaggagaagaggaaagcacttctttctttg 110466 Query: 174 aagaagtctgaagagaggaaggtcgaaattgataaggatcttcaggctatgcaactactt 233 |||| |||||||||||||||| |||||||| |||||| | || ||||||||| |||| Sbjct: 110467 aaga---ctgaagagaggaaggttgaaattgacaaggatttgaagtctatgcaaccactt 110523 Query: 234 tccaccaagaaaggaaatgatgaggttttcatcaaactgg 273 |||| ||||||| ||||||||| |||||||||||||||| Sbjct: 110524 tccaataagaaagaaaatgatgaagttttcatcaaactgg 110563 Score = 85.7 bits (43), Expect = 1e-13 Identities = 55/59 (93%) Strand = Plus / Plus Query: 277 ctgataaggaggctttgaagaagaaagagaatgctgaacgtgaagagcgtgctaagaag 335 |||| ||||| ||||||||||||||||| |||||||||||||| ||||||||||||||| Sbjct: 110651 ctgacaaggatgctttgaagaagaaagaaaatgctgaacgtgatgagcgtgctaagaag 110709 Score = 77.8 bits (39), Expect = 3e-11 Identities = 63/71 (88%) Strand = Plus / Plus Query: 334 agtctgtgagcatcaacgagttcctgaagcctgctgaaggagaaaggttctatggtggcc 393 ||||||||||||||||||||||||| || || ||||||||||| |||| |||||| |||| Sbjct: 111038 agtctgtgagcatcaacgagttcctaaaaccagctgaaggagagaggtactatggcggcc 111097 Query: 394 gaggccgtggc 404 | || |||||| Sbjct: 111098 gtggtcgtggc 111108 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 90 gaagaaaaggaagaggataa 109 |||||||||||||||||||| Sbjct: 109684 gaagaaaaggaagaggataa 109703
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 147 bits (74), Expect = 3e-32 Identities = 139/160 (86%), Gaps = 3/160 (1%) Strand = Plus / Plus Query: 114 atgactcttgatgaatttgagaaagtaatggaggagaagaggaaagcacttgatgctttg 173 ||||||||||| || ||||||||| ||| |||||||||||||||||||||| | ||||| Sbjct: 26259359 atgactcttgaggagtttgagaaattaagggaggagaagaggaaagcacttctttctttg 26259418 Query: 174 aagaagtctgaagagaggaaggtcgaaattgataaggatcttcaggctatgcaactactt 233 |||| |||||||||||||||| |||||||| |||||| | || ||||||||| |||| Sbjct: 26259419 aaga---ctgaagagaggaaggttgaaattgacaaggatttgaagtctatgcaaccactt 26259475 Query: 234 tccaccaagaaaggaaatgatgaggttttcatcaaactgg 273 |||| ||||||| ||||||||| |||||||||||||||| Sbjct: 26259476 tccaataagaaagaaaatgatgaagttttcatcaaactgg 26259515 Score = 85.7 bits (43), Expect = 1e-13 Identities = 55/59 (93%) Strand = Plus / Plus Query: 277 ctgataaggaggctttgaagaagaaagagaatgctgaacgtgaagagcgtgctaagaag 335 |||| ||||| ||||||||||||||||| |||||||||||||| ||||||||||||||| Sbjct: 26259603 ctgacaaggatgctttgaagaagaaagaaaatgctgaacgtgatgagcgtgctaagaag 26259661 Score = 77.8 bits (39), Expect = 3e-11 Identities = 63/71 (88%) Strand = Plus / Plus Query: 334 agtctgtgagcatcaacgagttcctgaagcctgctgaaggagaaaggttctatggtggcc 393 ||||||||||||||||||||||||| || || ||||||||||| |||| |||||| |||| Sbjct: 26259990 agtctgtgagcatcaacgagttcctaaaaccagctgaaggagagaggtactatggcggcc 26260049 Query: 394 gaggccgtggc 404 | || |||||| Sbjct: 26260050 gtggtcgtggc 26260060 Score = 44.1 bits (22), Expect = 0.36 Identities = 37/42 (88%) Strand = Plus / Plus Query: 340 tgagcatcaacgagttcctgaagcctgctgaaggagaaaggt 381 |||||||||| || ||| ||||||| ||||||||||| |||| Sbjct: 29138353 tgagcatcaatgaattcttgaagccggctgaaggagagaggt 29138394 Score = 44.1 bits (22), Expect = 0.36 Identities = 43/50 (86%) Strand = Plus / Plus Query: 111 gagatgactcttgatgaatttgagaaagtaatggaggagaagaggaaagc 160 ||||||||| | || |||| ||||||||| ||||||||||| ||||||| Sbjct: 29137944 gagatgactttggaggaatatgagaaagtgctggaggagaagcggaaagc 29137993 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 90 gaagaaaaggaagaggataa 109 |||||||||||||||||||| Sbjct: 26258636 gaagaaaaggaagaggataa 26258655
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 97.6 bits (49), Expect = 3e-17 Identities = 129/155 (83%), Gaps = 3/155 (1%) Strand = Plus / Minus Query: 111 gagatgactcttgatgaatttgagaaagtaatggaggagaagaggaaagcacttgatgct 170 |||||||||||||| || ||||||||| ||| |||||| ||| ||||||| ||| |||| Sbjct: 30089721 gagatgactcttgaggagtttgagaaattaagggaggaaaagcggaaagctcttcttgct 30089662 Query: 171 ttgaagaagtctgaagagaggaaggtcgaaattgataaggatcttcaggctatgcaacta 230 || ||| |||||||||||||||| || | |||||||| || ||| ||||||| | | Sbjct: 30089661 ttcaagg---ctgaagagaggaaggttgaggtcgataaggacctgcagtctatgcagcca 30089605 Query: 231 ctttccaccaagaaaggaaatgatgaggttttcat 265 ||||| |||||||||||||||||||| ||||||| Sbjct: 30089604 ctttctaccaagaaaggaaatgatgaaattttcat 30089570 Score = 91.7 bits (46), Expect = 2e-15 Identities = 64/70 (91%) Strand = Plus / Minus Query: 334 agtctgtgagcatcaacgagttcctgaagcctgctgaaggagaaaggttctatggtggcc 393 |||||||||||||||| ||||||||||||||||| ||||||||||||| |||||| |||| Sbjct: 30089109 agtctgtgagcatcaatgagttcctgaagcctgcggaaggagaaaggtactatggcggcc 30089050 Query: 394 gaggccgtgg 403 | || ||||| Sbjct: 30089049 gtggtcgtgg 30089040 Score = 60.0 bits (30), Expect = 6e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 111 gagatgactcttgatgaatttgagaaagtaatggaggagaagaggaaagc 160 ||||||||| | || |||| |||||||||| ||||||||||||||||||| Sbjct: 23737755 gagatgactttggaggaatatgagaaagtactggaggagaagaggaaagc 23737706 Score = 44.1 bits (22), Expect = 0.36 Identities = 34/38 (89%) Strand = Plus / Minus Query: 72 ggtgctgcagttgtggaagaagaaaaggaagaggataa 109 ||||||||| || ||||||||| |||||||||||||| Sbjct: 30090677 ggtgctgcaaatgaggaagaagagaaggaagaggataa 30090640 Score = 44.1 bits (22), Expect = 0.36 Identities = 34/38 (89%) Strand = Plus / Minus Query: 342 agcatcaacgagttcctgaagcctgctgaaggagaaag 379 |||||||| || ||||||||||| |||||||| ||||| Sbjct: 23737372 agcatcaatgaattcctgaagccggctgaaggtgaaag 23737335 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 86 ggaagaagaaaaggaagaggataa 109 |||||||||| ||||||||||||| Sbjct: 34410209 ggaagaagaagaggaagaggataa 34410232
>dbj|AP003292.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0690B02 Length = 153116 Score = 97.6 bits (49), Expect = 3e-17 Identities = 129/155 (83%), Gaps = 3/155 (1%) Strand = Plus / Minus Query: 111 gagatgactcttgatgaatttgagaaagtaatggaggagaagaggaaagcacttgatgct 170 |||||||||||||| || ||||||||| ||| |||||| ||| ||||||| ||| |||| Sbjct: 85711 gagatgactcttgaggagtttgagaaattaagggaggaaaagcggaaagctcttcttgct 85652 Query: 171 ttgaagaagtctgaagagaggaaggtcgaaattgataaggatcttcaggctatgcaacta 230 || ||| |||||||||||||||| || | |||||||| || ||| ||||||| | | Sbjct: 85651 ttcaagg---ctgaagagaggaaggttgaggtcgataaggacctgcagtctatgcagcca 85595 Query: 231 ctttccaccaagaaaggaaatgatgaggttttcat 265 ||||| |||||||||||||||||||| ||||||| Sbjct: 85594 ctttctaccaagaaaggaaatgatgaaattttcat 85560 Score = 91.7 bits (46), Expect = 2e-15 Identities = 64/70 (91%) Strand = Plus / Minus Query: 334 agtctgtgagcatcaacgagttcctgaagcctgctgaaggagaaaggttctatggtggcc 393 |||||||||||||||| ||||||||||||||||| ||||||||||||| |||||| |||| Sbjct: 85099 agtctgtgagcatcaatgagttcctgaagcctgcggaaggagaaaggtactatggcggcc 85040 Query: 394 gaggccgtgg 403 | || ||||| Sbjct: 85039 gtggtcgtgg 85030 Score = 44.1 bits (22), Expect = 0.36 Identities = 34/38 (89%) Strand = Plus / Minus Query: 72 ggtgctgcagttgtggaagaagaaaaggaagaggataa 109 ||||||||| || ||||||||| |||||||||||||| Sbjct: 86667 ggtgctgcaaatgaggaagaagagaaggaagaggataa 86630
>gb|AY104818.1| Zea mays PCO063451 mRNA sequence Length = 1163 Score = 71.9 bits (36), Expect = 2e-09 Identities = 81/96 (84%) Strand = Plus / Plus Query: 291 ttgaagaagaaagagaatgctgaacgtgaagagcgtgctaagaagtctgtgagcatcaac 350 ||||| |||||||| | ||||||| | ||||| || | |||||||| ||||||||||| Sbjct: 570 ttgaaaaagaaagaaagtgctgaaagagaagaacggggcaagaagtccctgagcatcaac 629 Query: 351 gagttcctgaagcctgctgaaggagaaaggttctat 386 |||||| ||||||| |||||||| ||||||| |||| Sbjct: 630 gagttcttgaagccagctgaaggcgaaaggtactat 665
>dbj|AB236828.1| Trifolium pratense RNA for putative nuclear antigen homolog, complete cds, clone: C2403 Length = 1546 Score = 69.9 bits (35), Expect = 6e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 327 gctaagaagtctgtgagcatcaacgagttcctgaagcctgctgaagg 373 ||||||||||||||||||||||| ||||| |||||||| |||||||| Sbjct: 1100 gctaagaagtctgtgagcatcaatgagtttctgaagccagctgaagg 1146
>dbj|AB236752.1| Trifolium pratense RNA for putative nuclear antigen homolog, complete cds, clone: C1477 Length = 1535 Score = 69.9 bits (35), Expect = 6e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 327 gctaagaagtctgtgagcatcaacgagttcctgaagcctgctgaagg 373 ||||||||||||||||||||||| ||||| |||||||| |||||||| Sbjct: 1079 gctaagaagtctgtgagcatcaatgagtttctgaagccagctgaagg 1125
>ref|NM_192656.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1068 Score = 60.0 bits (30), Expect = 6e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 111 gagatgactcttgatgaatttgagaaagtaatggaggagaagaggaaagc 160 ||||||||| | || |||| |||||||||| ||||||||||||||||||| Sbjct: 652 gagatgactttggaggaatatgagaaagtactggaggagaagaggaaagc 701 Score = 48.1 bits (24), Expect = 0.023 Identities = 42/48 (87%) Strand = Plus / Plus Query: 332 gaagtctgtgagcatcaacgagttcctgaagcctgctgaaggagaaag 379 ||||||| | |||||||| || ||||||||||| |||||||| ||||| Sbjct: 864 gaagtctcttagcatcaatgaattcctgaagccggctgaaggtgaaag 911
>dbj|AP003330.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1085F01 Length = 163671 Score = 60.0 bits (30), Expect = 6e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 111 gagatgactcttgatgaatttgagaaagtaatggaggagaagaggaaagc 160 ||||||||| | || |||| |||||||||| ||||||||||||||||||| Sbjct: 115459 gagatgactttggaggaatatgagaaagtactggaggagaagaggaaagc 115410 Score = 44.1 bits (22), Expect = 0.36 Identities = 34/38 (89%) Strand = Plus / Minus Query: 342 agcatcaacgagttcctgaagcctgctgaaggagaaag 379 |||||||| || ||||||||||| |||||||| ||||| Sbjct: 115076 agcatcaatgaattcctgaagccggctgaaggtgaaag 115039
>dbj|AP003022.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0681B11 Length = 144091 Score = 60.0 bits (30), Expect = 6e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 111 gagatgactcttgatgaatttgagaaagtaatggaggagaagaggaaagc 160 ||||||||| | || |||| |||||||||| ||||||||||||||||||| Sbjct: 18340 gagatgactttggaggaatatgagaaagtactggaggagaagaggaaagc 18291 Score = 44.1 bits (22), Expect = 0.36 Identities = 34/38 (89%) Strand = Plus / Minus Query: 342 agcatcaacgagttcctgaagcctgctgaaggagaaag 379 |||||||| || ||||||||||| |||||||| ||||| Sbjct: 17957 agcatcaatgaattcctgaagccggctgaaggtgaaag 17920
>dbj|AK065107.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001N19, full insert sequence Length = 1556 Score = 60.0 bits (30), Expect = 6e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 111 gagatgactcttgatgaatttgagaaagtaatggaggagaagaggaaagc 160 ||||||||| | || |||| |||||||||| ||||||||||||||||||| Sbjct: 952 gagatgactttggaggaatatgagaaagtactggaggagaagaggaaagc 1001 Score = 48.1 bits (24), Expect = 0.023 Identities = 42/48 (87%) Strand = Plus / Plus Query: 332 gaagtctgtgagcatcaacgagttcctgaagcctgctgaaggagaaag 379 ||||||| | |||||||| || ||||||||||| |||||||| ||||| Sbjct: 1164 gaagtctcttagcatcaatgaattcctgaagccggctgaaggtgaaag 1211
>gb|AF110226.1| Nicotiana tabacum nuclear RNA binding protein (RggA) mRNA, partial cds Length = 1150 Score = 58.0 bits (29), Expect = 2e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 342 agcatcaacgagttcctgaagcctgctgaaggagaaa 378 ||||| |||||||||||||||||||| |||||||||| Sbjct: 725 agcataaacgagttcctgaagcctgcagaaggagaaa 761 Score = 40.1 bits (20), Expect = 5.6 Identities = 47/56 (83%) Strand = Plus / Plus Query: 102 gaggataatgagatgactcttgatgaatttgagaaagtaatggaggagaagaggaa 157 ||||| || |||||||| ||||| || | |||||| ||||||| ||||||||||| Sbjct: 503 gaggagaaggagatgacccttgaagagtatgagaagctaatggaagagaagaggaa 558
>gb|AF110230.1| Spinacia oleracea nuclear RNA binding protein C (RggC) mRNA, partial cds Length = 890 Score = 56.0 bits (28), Expect = 9e-05 Identities = 40/44 (90%) Strand = Plus / Plus Query: 330 aagaagtctgtgagcatcaacgagttcctgaagcctgctgaagg 373 ||||||||||| ||||| |||||||| |||||||| |||||||| Sbjct: 565 aagaagtctgtcagcattaacgagtttctgaagcccgctgaagg 608
>gb|AF110229.1| Spinacia oleracea nuclear RNA binding protein B (RggB) mRNA, partial cds Length = 925 Score = 56.0 bits (28), Expect = 9e-05 Identities = 40/44 (90%) Strand = Plus / Plus Query: 330 aagaagtctgtgagcatcaacgagttcctgaagcctgctgaagg 373 ||||||||||| ||||| |||||||| |||||||| |||||||| Sbjct: 533 aagaagtctgtcagcattaacgagtttctgaagcccgctgaagg 576
>ref|XM_476001.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1152 Score = 54.0 bits (27), Expect = 4e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 102 gaggataatgagatgactcttgatgaatttgagaaagtaatggaggagaagaggaaagc 160 |||||||| ||||||||| | || |||| ||||||||| ||||||||||| ||||||| Sbjct: 727 gaggataaggagatgactttggaggaatatgagaaagtgctggaggagaagcggaaagc 785 Score = 48.1 bits (24), Expect = 0.023 Identities = 45/52 (86%) Strand = Plus / Plus Query: 330 aagaagtctgtgagcatcaacgagttcctgaagcctgctgaaggagaaaggt 381 |||||||| |||||||||| || ||| ||||||| ||||||||||| |||| Sbjct: 949 aagaagtccctgagcatcaatgaattcttgaagccggctgaaggagagaggt 1000
>dbj|AK073438.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033046L01, full insert sequence Length = 1699 Score = 54.0 bits (27), Expect = 4e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 102 gaggataatgagatgactcttgatgaatttgagaaagtaatggaggagaagaggaaagc 160 |||||||| ||||||||| | || |||| ||||||||| ||||||||||| ||||||| Sbjct: 951 gaggataaggagatgactttggaggaatatgagaaagtgctggaggagaagcggaaagc 1009 Score = 48.1 bits (24), Expect = 0.023 Identities = 45/52 (86%) Strand = Plus / Plus Query: 330 aagaagtctgtgagcatcaacgagttcctgaagcctgctgaaggagaaaggt 381 |||||||| |||||||||| || ||| ||||||| ||||||||||| |||| Sbjct: 1173 aagaagtccctgagcatcaatgaattcttgaagccggctgaaggagagaggt 1224
>ref|NM_117785.2| Arabidopsis thaliana RNA binding AT4G16830 mRNA, complete cds Length = 1536 Score = 52.0 bits (26), Expect = 0.001 Identities = 35/38 (92%) Strand = Plus / Plus Query: 327 gctaagaagtctgtgagcatcaacgagttcctgaagcc 364 ||||||||| ||||||||||||| ||||| |||||||| Sbjct: 1053 gctaagaaggctgtgagcatcaatgagtttctgaagcc 1090 Score = 48.1 bits (24), Expect = 0.023 Identities = 45/52 (86%) Strand = Plus / Plus Query: 102 gaggataatgagatgactcttgatgaatttgagaaagtaatggaggagaaga 153 |||||||| || |||||||||||||| | ||||||| || | |||||||||| Sbjct: 846 gaggataaggaaatgactcttgatgagtatgagaaaatactcgaggagaaga 897
>gb|DQ207876.1| Solanum tuberosum clone 092B12 nuclear RNA binding protein-like mRNA, complete cds Length = 1480 Score = 52.0 bits (26), Expect = 0.001 Identities = 35/38 (92%) Strand = Plus / Plus Query: 342 agcatcaacgagttcctgaagcctgctgaaggagaaag 379 ||||| |||||||| |||||||||||||| |||||||| Sbjct: 1100 agcataaacgagtttctgaagcctgctgagggagaaag 1137
>gb|BT000559.1| Arabidopsis thaliana nuclear antigen homolog (At4g16830/dl4440w) mRNA, complete cds Length = 1068 Score = 52.0 bits (26), Expect = 0.001 Identities = 35/38 (92%) Strand = Plus / Plus Query: 327 gctaagaagtctgtgagcatcaacgagttcctgaagcc 364 ||||||||| ||||||||||||| ||||| |||||||| Sbjct: 871 gctaagaaggctgtgagcatcaatgagtttctgaagcc 908 Score = 48.1 bits (24), Expect = 0.023 Identities = 45/52 (86%) Strand = Plus / Plus Query: 102 gaggataatgagatgactcttgatgaatttgagaaagtaatggaggagaaga 153 |||||||| || |||||||||||||| | ||||||| || | |||||||||| Sbjct: 664 gaggataaggaaatgactcttgatgagtatgagaaaatactcgaggagaaga 715
>gb|AY096500.1| Arabidopsis thaliana putative nuclear antigen-like protein (At4g16830) mRNA, complete cds Length = 1099 Score = 52.0 bits (26), Expect = 0.001 Identities = 35/38 (92%) Strand = Plus / Plus Query: 327 gctaagaagtctgtgagcatcaacgagttcctgaagcc 364 ||||||||| ||||||||||||| ||||| |||||||| Sbjct: 871 gctaagaaggctgtgagcatcaatgagtttctgaagcc 908 Score = 48.1 bits (24), Expect = 0.023 Identities = 45/52 (86%) Strand = Plus / Plus Query: 102 gaggataatgagatgactcttgatgaatttgagaaagtaatggaggagaaga 153 |||||||| || |||||||||||||| | ||||||| || | |||||||||| Sbjct: 664 gaggataaggaaatgactcttgatgagtatgagaaaatactcgaggagaaga 715
>gb|AY063896.1| Arabidopsis thaliana putative nuclear antigen homolog (At4g16830) mRNA, complete cds Length = 1443 Score = 52.0 bits (26), Expect = 0.001 Identities = 35/38 (92%) Strand = Plus / Plus Query: 327 gctaagaagtctgtgagcatcaacgagttcctgaagcc 364 ||||||||| ||||||||||||| ||||| |||||||| Sbjct: 1027 gctaagaaggctgtgagcatcaatgagtttctgaagcc 1064 Score = 48.1 bits (24), Expect = 0.023 Identities = 45/52 (86%) Strand = Plus / Plus Query: 102 gaggataatgagatgactcttgatgaatttgagaaagtaatggaggagaaga 153 |||||||| || |||||||||||||| | ||||||| || | |||||||||| Sbjct: 820 gaggataaggaaatgactcttgatgagtatgagaaaatactcgaggagaaga 871
>gb|AY127018.1| Arabidopsis thaliana AT4g16830/dl4440w mRNA, complete cds Length = 1431 Score = 52.0 bits (26), Expect = 0.001 Identities = 35/38 (92%) Strand = Plus / Plus Query: 327 gctaagaagtctgtgagcatcaacgagttcctgaagcc 364 ||||||||| ||||||||||||| ||||| |||||||| Sbjct: 1034 gctaagaaggctgtgagcatcaatgagtttctgaagcc 1071 Score = 48.1 bits (24), Expect = 0.023 Identities = 45/52 (86%) Strand = Plus / Plus Query: 102 gaggataatgagatgactcttgatgaatttgagaaagtaatggaggagaaga 153 |||||||| || |||||||||||||| | ||||||| || | |||||||||| Sbjct: 827 gaggataaggaaatgactcttgatgagtatgagaaaatactcgaggagaaga 878
>emb|BX827515.1|CNS0A2VZ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS68ZE03 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1287 Score = 52.0 bits (26), Expect = 0.001 Identities = 35/38 (92%) Strand = Plus / Plus Query: 327 gctaagaagtctgtgagcatcaacgagttcctgaagcc 364 ||||||||| ||||||||||||| ||||| |||||||| Sbjct: 869 gctaagaaggctgtgagcatcaatgagtttctgaagcc 906 Score = 48.1 bits (24), Expect = 0.023 Identities = 45/52 (86%) Strand = Plus / Plus Query: 102 gaggataatgagatgactcttgatgaatttgagaaagtaatggaggagaaga 153 |||||||| || |||||||||||||| | ||||||| || | |||||||||| Sbjct: 662 gaggataaggaaatgactcttgatgagtatgagaaaatactcgaggagaaga 713
>dbj|AB236845.1| Trifolium pratense RNA for hypothetical protein, complete cds, clone: C461 Length = 1552 Score = 50.1 bits (25), Expect = 0.006 Identities = 34/37 (91%) Strand = Plus / Plus Query: 340 tgagcatcaacgagttcctgaagcctgctgaaggaga 376 ||||||| || ||||| |||||||||||||||||||| Sbjct: 1109 tgagcattaatgagtttctgaagcctgctgaaggaga 1145
>emb|AJ313093.1|BVU313093 Beta vulgaris mRNA for salt tolerance protein 2 (sato2 gene) Length = 1071 Score = 50.1 bits (25), Expect = 0.006 Identities = 34/37 (91%) Strand = Plus / Plus Query: 250 atgatgaggttttcatcaaactgggtgctgataagga 286 |||||||||||||||| || |||||| |||||||||| Sbjct: 818 atgatgaggttttcataaagctgggttctgataagga 854 Score = 48.1 bits (24), Expect = 0.023 Identities = 39/44 (88%) Strand = Plus / Plus Query: 114 atgactcttgatgaatttgagaaagtaatggaggagaagaggaa 157 ||||||||||| || | |||||| ||| |||||||||||||||| Sbjct: 685 atgactcttgaggagtatgagaaggtattggaggagaagaggaa 728 Score = 44.1 bits (22), Expect = 0.36 Identities = 34/38 (89%) Strand = Plus / Plus Query: 330 aagaagtctgtgagcatcaacgagttcctgaagcctgc 367 |||||||||||||||||||| || || || |||||||| Sbjct: 892 aagaagtctgtgagcatcaatgaatttcttaagcctgc 929
>gb|AY084828.1| Arabidopsis thaliana clone 118826 mRNA, complete sequence Length = 1474 Score = 48.1 bits (24), Expect = 0.023 Identities = 45/52 (86%) Strand = Plus / Plus Query: 102 gaggataatgagatgactcttgatgaatttgagaaagtaatggaggagaaga 153 |||||||| || |||||||||||||| | ||||||| || | |||||||||| Sbjct: 823 gaggataaggaaatgactcttgatgagtatgagaaaatacttgaggagaaga 874 Score = 46.1 bits (23), Expect = 0.090 Identities = 32/35 (91%) Strand = Plus / Plus Query: 327 gctaagaagtctgtgagcatcaacgagttcctgaa 361 ||||||||| ||||||||||||| ||||| ||||| Sbjct: 1030 gctaagaaggctgtgagcatcaatgagtttctgaa 1064
>emb|AJ313092.1|BVU313092 Beta vulgaris mRNA for salt tolerance protein 1 (sato1 gene) Length = 1300 Score = 48.1 bits (24), Expect = 0.023 Identities = 39/44 (88%) Strand = Plus / Plus Query: 330 aagaagtctgtgagcatcaacgagttcctgaagcctgctgaagg 373 ||||||||||| ||||| || || || ||||||||||||||||| Sbjct: 939 aagaagtctgtcagcattaatgaatttctgaagcctgctgaagg 982
>ref|NM_178949.1| Arabidopsis thaliana unknown protein AT4G01450 transcript variant AT4G01450.1 mRNA, complete cds Length = 1359 Score = 46.1 bits (23), Expect = 0.090 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 gtggaagaagaaaaggaagagga 106 ||||||||||||||||||||||| Sbjct: 1085 gtggaagaagaaaaggaagagga 1107
>ref|NM_202766.1| Arabidopsis thaliana unknown protein AT4G01450 transcript variant AT4G01450.3 mRNA, complete cds Length = 1336 Score = 46.1 bits (23), Expect = 0.090 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 gtggaagaagaaaaggaagagga 106 ||||||||||||||||||||||| Sbjct: 1041 gtggaagaagaaaaggaagagga 1063
>ref|NM_116375.3| Arabidopsis thaliana unknown protein AT4G01450 transcript variant AT4G01450.2 mRNA, complete cds Length = 1453 Score = 46.1 bits (23), Expect = 0.090 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 gtggaagaagaaaaggaagagga 106 ||||||||||||||||||||||| Sbjct: 1139 gtggaagaagaaaaggaagagga 1161
>emb|AL161492.2|ATCHRIV4 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 4 Length = 198697 Score = 46.1 bits (23), Expect = 0.090 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 gtggaagaagaaaaggaagagga 106 ||||||||||||||||||||||| Sbjct: 32975 gtggaagaagaaaaggaagagga 32997
>emb|BX826492.1|CNS0A3BQ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB30ZF03 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1257 Score = 46.1 bits (23), Expect = 0.090 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 gtggaagaagaaaaggaagagga 106 ||||||||||||||||||||||| Sbjct: 1127 gtggaagaagaaaaggaagagga 1149
>emb|BX827878.1|CNS0A328 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH30ZC06 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1441 Score = 46.1 bits (23), Expect = 0.090 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 gtggaagaagaaaaggaagagga 106 ||||||||||||||||||||||| Sbjct: 1128 gtggaagaagaaaaggaagagga 1150
>gb|BT005510.1| Arabidopsis thaliana clone U50500 unknown protein (At4g01450) mRNA, complete cds Length = 1063 Score = 46.1 bits (23), Expect = 0.090 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 gtggaagaagaaaaggaagagga 106 ||||||||||||||||||||||| Sbjct: 955 gtggaagaagaaaaggaagagga 977
>gb|AF096370.1|F11O4 Arabidopsis thaliana BAC F11O4 Length = 72872 Score = 46.1 bits (23), Expect = 0.090 Identities = 23/23 (100%) Strand = Plus / Minus Query: 84 gtggaagaagaaaaggaagagga 106 ||||||||||||||||||||||| Sbjct: 70602 gtggaagaagaaaaggaagagga 70580
>dbj|AK117409.1| Arabidopsis thaliana At4g01450 mRNA for unknown protein, complete cds, clone: RAFL17-01-J10 Length = 1386 Score = 46.1 bits (23), Expect = 0.090 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 gtggaagaagaaaaggaagagga 106 ||||||||||||||||||||||| Sbjct: 1108 gtggaagaagaaaaggaagagga 1130
>emb|AL626772.10| Mouse DNA sequence from clone RP23-90D4 on chromosome 4, complete sequence Length = 230614 Score = 46.1 bits (23), Expect = 0.090 Identities = 23/23 (100%) Strand = Plus / Plus Query: 86 ggaagaagaaaaggaagaggata 108 ||||||||||||||||||||||| Sbjct: 151848 ggaagaagaaaaggaagaggata 151870
>ref|XM_458392.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0C17446g) partial mRNA Length = 1638 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 89 agaagaaaaggaagaggataat 110 |||||||||||||||||||||| Sbjct: 1281 agaagaaaaggaagaggataat 1302
>gb|AC136216.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0022J22, complete sequence Length = 142854 Score = 44.1 bits (22), Expect = 0.36 Identities = 37/42 (88%) Strand = Plus / Plus Query: 340 tgagcatcaacgagttcctgaagcctgctgaaggagaaaggt 381 |||||||||| || ||| ||||||| ||||||||||| |||| Sbjct: 21812 tgagcatcaatgaattcttgaagccggctgaaggagagaggt 21853 Score = 44.1 bits (22), Expect = 0.36 Identities = 43/50 (86%) Strand = Plus / Plus Query: 111 gagatgactcttgatgaatttgagaaagtaatggaggagaagaggaaagc 160 ||||||||| | || |||| ||||||||| ||||||||||| ||||||| Sbjct: 21403 gagatgactttggaggaatatgagaaagtgctggaggagaagcggaaagc 21452
>gb|AC105260.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1115_D04, complete sequence Length = 100800 Score = 44.1 bits (22), Expect = 0.36 Identities = 37/42 (88%) Strand = Plus / Plus Query: 340 tgagcatcaacgagttcctgaagcctgctgaaggagaaaggt 381 |||||||||| || ||| ||||||| ||||||||||| |||| Sbjct: 64577 tgagcatcaatgaattcttgaagccggctgaaggagagaggt 64618 Score = 44.1 bits (22), Expect = 0.36 Identities = 43/50 (86%) Strand = Plus / Plus Query: 111 gagatgactcttgatgaatttgagaaagtaatggaggagaagaggaaagc 160 ||||||||| | || |||| ||||||||| ||||||||||| ||||||| Sbjct: 64168 gagatgactttggaggaatatgagaaagtgctggaggagaagcggaaagc 64217
>emb|CT026474.3| Macaca mulatta chromosome 9 BAC CH250-270M9, complete sequence Length = 168693 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Minus Query: 81 gttgtggaagaagaaaaggaagagga 106 |||| ||||||||||||||||||||| Sbjct: 77660 gttggggaagaagaaaaggaagagga 77635
>emb|AL359922.10| Human DNA sequence from clone RP11-70L8 on chromosome 9 Contains a pseudogene similar to part of beta tubulin, the MTAP gene for methylthioadenosine phosphorylase (MSAP), a novel gene and a CpG island, complete sequence Length = 168656 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Plus Query: 81 gttgtggaagaagaaaaggaagagga 106 |||| ||||||||||||||||||||| Sbjct: 22850 gttggggaagaagaaaaggaagagga 22875
>emb|CR382135.1| Debaryomyces hansenii chromosome C of strain CBS767 of Debaryomyces hansenii Length = 1592360 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 89 agaagaaaaggaagaggataat 110 |||||||||||||||||||||| Sbjct: 1435421 agaagaaaaggaagaggataat 1435442
>ref|XM_213983.3| PREDICTED: Rattus norvegicus similar to KIAA1078 protein (predicted) (LOC289400), mRNA Length = 6845 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 140 aatggaggagaagaggaaagca 161 |||||||||||||||||||||| Sbjct: 1484 aatggaggagaagaggaaagca 1505
>gb|AC140111.3| Mus musculus BAC clone RP23-16F4 from 12, complete sequence Length = 175729 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Minus Query: 282 aaggaggctttgaagaagaaagagaa 307 |||||||| ||||||||||||||||| Sbjct: 153049 aaggaggcgttgaagaagaaagagaa 153024
>gb|AC126269.3| Mus musculus BAC clone RP23-230D6 from 12, complete sequence Length = 184181 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Minus Query: 282 aaggaggctttgaagaagaaagagaa 307 |||||||| ||||||||||||||||| Sbjct: 15138 aaggaggcgttgaagaagaaagagaa 15113
>gb|AC161382.4| Mus musculus BAC clone RP23-25A17 from chromosome 9, complete sequence Length = 169123 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 86 ggaagaagaaaaggaagaggataatgaga 114 |||||| ||||||||||||||||| |||| Sbjct: 35699 ggaagaggaaaaggaagaggataaagaga 35727
>gb|AC123609.11| Mus musculus chromosome 3, clone RP23-281B17, complete sequence Length = 223516 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 39 accaaggcagatgagaacaag 59 ||||||||||||||||||||| Sbjct: 114994 accaaggcagatgagaacaag 115014
>ref|NM_001003232.1| Canis familiaris calnexin (CANX), mRNA Length = 3302 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 86 ggaagaagaaaaggaagagga 106 ||||||||||||||||||||| Sbjct: 1685 ggaagaagaaaaggaagagga 1705
>gb|AY752997.1| Penaeus monodon clone ct108 microsatellite sequence Length = 679 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 86 ggaagaagaaaaggaagagga 106 ||||||||||||||||||||| Sbjct: 462 ggaagaagaaaaggaagagga 442
>gb|AF469174.1| Cryptosporidium parvum strain cpa16 microsatellite sequence Length = 238 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 86 ggaagaagaaaaggaagagga 106 ||||||||||||||||||||| Sbjct: 82 ggaagaagaaaaggaagagga 102
>gb|AC124981.25| Mus musculus chromosome 5, clone RP24-170P20, complete sequence Length = 153767 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 86 ggaagaagaaaaggaagagga 106 ||||||||||||||||||||| Sbjct: 137868 ggaagaagaaaaggaagagga 137888
>gb|AC166079.2| Mus musculus BAC clone RP23-51L15 from chromosome 7, complete sequence Length = 193749 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 86 ggaagaagaaaaggaagagga 106 ||||||||||||||||||||| Sbjct: 81939 ggaagaagaaaaggaagagga 81959
>gb|AC111143.10| Mus musculus chromosome 3, clone RP23-372C7, complete sequence Length = 147125 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 86 ggaagaagaaaaggaagagga 106 ||||||||||||||||||||| Sbjct: 76442 ggaagaagaaaaggaagagga 76422
>ref|XM_878987.1| PREDICTED: Bos taurus similar to nuclear receptor co-repressor 1, transcript variant 12 (LOC507663), mRNA Length = 8561 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 89 agaagaaaaggaagaggataa 109 ||||||||||||||||||||| Sbjct: 1612 agaagaaaaggaagaggataa 1632
>ref|XM_866711.1| PREDICTED: Bos taurus similar to nuclear receptor co-repressor 1, transcript variant 3 (LOC507663), mRNA Length = 8609 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 89 agaagaaaaggaagaggataa 109 ||||||||||||||||||||| Sbjct: 1612 agaagaaaaggaagaggataa 1632
>ref|XM_584318.2| PREDICTED: Bos taurus similar to nuclear receptor co-repressor 1, transcript variant 1 (LOC507663), mRNA Length = 8822 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 89 agaagaaaaggaagaggataa 109 ||||||||||||||||||||| Sbjct: 1615 agaagaaaaggaagaggataa 1635
>ref|XM_878906.1| PREDICTED: Bos taurus similar to nuclear receptor co-repressor 1, transcript variant 11 (LOC507663), mRNA Length = 8206 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 89 agaagaaaaggaagaggataa 109 ||||||||||||||||||||| Sbjct: 1215 agaagaaaaggaagaggataa 1235
>ref|XM_878879.1| PREDICTED: Bos taurus similar to nuclear receptor co-repressor 1, transcript variant 10 (LOC507663), mRNA Length = 8252 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 89 agaagaaaaggaagaggataa 109 ||||||||||||||||||||| Sbjct: 1612 agaagaaaaggaagaggataa 1632
>ref|XM_878850.1| PREDICTED: Bos taurus similar to nuclear receptor co-repressor 1, transcript variant 9 (LOC507663), mRNA Length = 7547 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 89 agaagaaaaggaagaggataa 109 ||||||||||||||||||||| Sbjct: 1612 agaagaaaaggaagaggataa 1632
>ref|XM_878817.1| PREDICTED: Bos taurus similar to nuclear receptor co-repressor 1, transcript variant 8 (LOC507663), mRNA Length = 2962 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 89 agaagaaaaggaagaggataa 109 ||||||||||||||||||||| Sbjct: 1614 agaagaaaaggaagaggataa 1634
>ref|XM_878787.1| PREDICTED: Bos taurus similar to nuclear receptor co-repressor 1, transcript variant 7 (LOC507663), mRNA Length = 2878 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 89 agaagaaaaggaagaggataa 109 ||||||||||||||||||||| Sbjct: 1530 agaagaaaaggaagaggataa 1550
>ref|XM_878726.1| PREDICTED: Bos taurus similar to nuclear receptor co-repressor 1, transcript variant 5 (LOC507663), mRNA Length = 2963 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 89 agaagaaaaggaagaggataa 109 ||||||||||||||||||||| Sbjct: 1615 agaagaaaaggaagaggataa 1635
>ref|XM_878695.1| PREDICTED: Bos taurus similar to nuclear receptor co-repressor 1, transcript variant 4 (LOC507663), mRNA Length = 7459 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 89 agaagaaaaggaagaggataa 109 ||||||||||||||||||||| Sbjct: 1612 agaagaaaaggaagaggataa 1632
>gb|AC161509.8| Mus musculus chromosome 7, clone RP23-53O17, complete sequence Length = 196638 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 86 ggaagaagaaaaggaagagga 106 ||||||||||||||||||||| Sbjct: 129521 ggaagaagaaaaggaagagga 129541
>gb|AC144902.2| Mus musculus BAC clone RP23-400D9 from chromosome 5, complete sequence Length = 204858 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 86 ggaagaagaaaaggaagagga 106 ||||||||||||||||||||| Sbjct: 184183 ggaagaagaaaaggaagagga 184163
>gb|AC126426.3| Mus musculus BAC clone RP24-291G13 from chromosome 13, complete sequence Length = 201051 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 87 gaagaagaaaaggaagaggat 107 ||||||||||||||||||||| Sbjct: 186399 gaagaagaaaaggaagaggat 186379
>gb|AC120837.6| Mus musculus Strain C57BL6/J chromosome 11 BAC, RP23-439E2, Complete Sequence, complete sequence Length = 211996 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 86 ggaagaagaaaaggaagagga 106 ||||||||||||||||||||| Sbjct: 206509 ggaagaagaaaaggaagagga 206489
>gb|AC129015.4| Mus musculus BAC clone RP24-364A8 from chromosome 5, complete sequence Length = 165259 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 86 ggaagaagaaaaggaagagga 106 ||||||||||||||||||||| Sbjct: 47141 ggaagaagaaaaggaagagga 47121
>gb|AC122540.4| Mus musculus BAC clone RP24-555K13 from chromosome 17, complete sequence Length = 149770 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 86 ggaagaagaaaaggaagagga 106 ||||||||||||||||||||| Sbjct: 92981 ggaagaagaaaaggaagagga 92961
>ref|XM_642900.1| Entamoeba histolytica HM-1:IMSS protein kinase (650.t00003) partial mRNA Length = 2400 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 118 ctcttgatgaatttgagaaag 138 ||||||||||||||||||||| Sbjct: 1721 ctcttgatgaatttgagaaag 1741
>gb|AC093582.3| Homo sapiens BAC clone RP13-254B10 from 7, complete sequence Length = 91224 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 86 ggaagaagaaaaggaagagga 106 ||||||||||||||||||||| Sbjct: 76930 ggaagaagaaaaggaagagga 76910
>gb|AC110236.8| Mus musculus chromosome 15, clone RP23-104L4, complete sequence Length = 233499 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 86 ggaagaagaaaaggaagagga 106 ||||||||||||||||||||| Sbjct: 66776 ggaagaagaaaaggaagagga 66756
>emb|AL391419.13| Human DNA sequence from clone RP11-54I5 on chromosome X Contains a glutamic-oxaloacetic transaminase 2 (GOT2) pseudogene, complete sequence Length = 34547 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 86 ggaagaagaaaaggaagagga 106 ||||||||||||||||||||| Sbjct: 331 ggaagaagaaaaggaagagga 351
>emb|AL445929.5| Human DNA sequence from clone RP11-408M7 on chromosome 13 Contains a CpG island, complete sequence Length = 169403 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 86 ggaagaagaaaaggaagagga 106 ||||||||||||||||||||| Sbjct: 140894 ggaagaagaaaaggaagagga 140874
>emb|AL160398.27| Human DNA sequence from clone RP11-15N12 on chromosome 6 Contains the 5' end of the gene for the possible ortholog of R. norvegicus ion transporter protein (NRITP), complete sequence Length = 134995 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 86 ggaagaagaaaaggaagagga 106 ||||||||||||||||||||| Sbjct: 26845 ggaagaagaaaaggaagagga 26865
>gb|AC129292.4| Mus musculus chromosome 5 clone RP24-507A8, complete sequence Length = 186200 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 86 ggaagaagaaaaggaagagga 106 ||||||||||||||||||||| Sbjct: 51475 ggaagaagaaaaggaagagga 51495
>emb|AL139139.9| Human DNA sequence from clone RP5-1052I5 on chromosome 1p22.1-31.1 Contains gene LOC339524 and the 3' end of a variant of the HS2ST1 gene for heparan sulfate 2-O-sulfotransferase 1 (FLJ11317), complete sequence Length = 82299 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 86 ggaagaagaaaaggaagagga 106 ||||||||||||||||||||| Sbjct: 16928 ggaagaagaaaaggaagagga 16908
>emb|AL117332.16|HSJ198K11 Human DNA sequence from clone RP1-198K11 on chromosome 20 Contains the 3' end of the C20orf19 gene for hypothalamus protein HT013, the 5' end of the XRN2 gene for 5'-3' exoribonuclease 2, a novel zinc finger pseudogene and a CpG island, complete sequence Length = 134132 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 86 ggaagaagaaaaggaagagga 106 ||||||||||||||||||||| Sbjct: 44259 ggaagaagaaaaggaagagga 44279
>emb|AL713870.26| Mouse DNA sequence from clone RP24-239D8 on chromosome 11 Contains the 5' end of the Slc36a3 gene for solute carrier family 36 (proton/amino acid symporter) member 3, two novel genes, the Tramd1 gene for tramdorin 1 (transmembrane domain rich protein), the Slc36a1 gene for solute carrier family 36 (proton/amino acid symporter) member 1 and the gene for the ortholog of human and rat FAT tumor suppressor homolog 2 (Drosophila) FAT2, complete sequence Length = 188782 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 86 ggaagaagaaaaggaagagga 106 ||||||||||||||||||||| Sbjct: 50159 ggaagaagaaaaggaagagga 50179
>emb|AL596110.15| Mouse DNA sequence from clone RP23-330N10 on chromosome 11 Contains the 3' end of a variant of the gene for a novel protein similar to human sperm antigen HCMOGT-1 (B230396K10Rik), the Adora2b gene for adenosine A2b receptor, the gene for a novel protein (2410012H22Rik), a somatic cytochrome c (Cycs) pseudogene, a novel gene, a novel pseudogene, the gene for a novel protein (2810460C24Rik), the 3' end of the Ncor1 gene for nuclear receptor co-repressor 1 and two CpG islands, complete sequence Length = 214834 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 89 agaagaaaaggaagaggataa 109 ||||||||||||||||||||| Sbjct: 3680 agaagaaaaggaagaggataa 3700
>emb|AL645594.9| Mouse DNA sequence from clone RP23-316C11 on chromosome 11 Contains the Cct6b gene for chaperonin subunit 6b (zeta), a barrier to autointegration factor 1 (Banf1) pseudogene, a GTP binding protein 3 (Gtpbp3) pseudogene, a ribosomal protein S20 (Rps20) pseudogene, three novel genes, the Lig3 gene for ATP-dependent DNA ligase III,, complete sequence Length = 178364 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 86 ggaagaagaaaaggaagagga 106 ||||||||||||||||||||| Sbjct: 93727 ggaagaagaaaaggaagagga 93747
>gb|BC062162.1| Mus musculus nuclear receptor co-repressor 1, mRNA (cDNA clone IMAGE:30240594), containing frame-shift errors Length = 1819 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 89 agaagaaaaggaagaggataa 109 ||||||||||||||||||||| Sbjct: 1779 agaagaaaaggaagaggataa 1799
>gb|BC029627.1| Mus musculus nuclear receptor co-repressor 1, mRNA (cDNA clone IMAGE:4501757), containing frame-shift errors Length = 1835 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 89 agaagaaaaggaagaggataa 109 ||||||||||||||||||||| Sbjct: 1778 agaagaaaaggaagaggataa 1798
>gb|AC090647.6| Genomic sequence for Mus musculus, clone RP23-252I12, complete sequence Length = 139891 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 86 ggaagaagaaaaggaagagga 106 ||||||||||||||||||||| Sbjct: 15079 ggaagaagaaaaggaagagga 15059
>ref|NM_011308.2| Mus musculus nuclear receptor co-repressor 1 (Ncor1), mRNA Length = 8740 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 89 agaagaaaaggaagaggataa 109 ||||||||||||||||||||| Sbjct: 1800 agaagaaaaggaagaggataa 1820
>gb|AC183380.3| Pan troglodytes BAC clone CH251-605G19 from chromosome 7, complete sequence Length = 223844 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 86 ggaagaagaaaaggaagagga 106 ||||||||||||||||||||| Sbjct: 60465 ggaagaagaaaaggaagagga 60445
>gb|AF042797.2| Takifugu rubripes FRG1 (FRG1), N-acylsphingosine amidohydrolase (ASAH), PCM1 (PCM1), squamous cell carcinoma antigen recognised by cytotoxic T lymphocytes (SART1), oxysterol binding protein 1 (OSBP1), and caspase 3 (CASP3) genes, complete cds Length = 42616 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 385 atggtggccgaggccgtggcg 405 ||||||||||||||||||||| Sbjct: 30150 atggtggccgaggccgtggcg 30130
>gb|AC006429.4| Arabidopsis thaliana chromosome 2 clone F15K19 map mi421, complete sequence Length = 94875 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 86 ggaagaagaaaaggaagagga 106 ||||||||||||||||||||| Sbjct: 64608 ggaagaagaaaaggaagagga 64588
>dbj|AK137695.1| Mus musculus adult female vagina cDNA, RIKEN full-length enriched library, clone:9930037N14 product:nuclear receptor co-repressor 1, full insert sequence Length = 2981 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 89 agaagaaaaggaagaggataa 109 ||||||||||||||||||||| Sbjct: 347 agaagaaaaggaagaggataa 367
>gb|AC093425.2| Homo sapiens chromosome 1 clone RP11-470E16, complete sequence Length = 179499 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 86 ggaagaagaaaaggaagagga 106 ||||||||||||||||||||| Sbjct: 28403 ggaagaagaaaaggaagagga 28423
>gb|AF292120.1|AF292120 Takifugu rubripes clone 16-k18 squamous-cell carcinoma T-cell-recognized antigen (SART1) mRNA, partial cds Length = 1583 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 385 atggtggccgaggccgtggcg 405 ||||||||||||||||||||| Sbjct: 920 atggtggccgaggccgtggcg 900
>gb|AF292119.1|AF292119 Takifugu rubripes clone 16-i12 squamous-cell carcinoma T-cell-recognized antigen (SART1) mRNA, partial cds Length = 1318 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 385 atggtggccgaggccgtggcg 405 ||||||||||||||||||||| Sbjct: 655 atggtggccgaggccgtggcg 635
>gb|BC086657.1| Mus musculus nuclear receptor co-repressor 1, mRNA (cDNA clone MGC:96258 IMAGE:30545994), complete cds Length = 7264 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 89 agaagaaaaggaagaggataa 109 ||||||||||||||||||||| Sbjct: 1581 agaagaaaaggaagaggataa 1601
>gb|AC156283.6| Mus musculus 6 BAC RP24-327I4 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 172188 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 86 ggaagaagaaaaggaagagga 106 ||||||||||||||||||||| Sbjct: 164435 ggaagaagaaaaggaagagga 164415
>gb|AC154733.2| Mus musculus BAC clone RP24-380I6 from chromosome 13, complete sequence Length = 209751 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 87 gaagaagaaaaggaagaggat 107 ||||||||||||||||||||| Sbjct: 34169 gaagaagaaaaggaagaggat 34149
>gb|AC084594.1|CBRG42E21 Caenorhabditis briggsae cosmid G42E21, complete sequence Length = 39130 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 86 ggaagaagaaaaggaagagga 106 ||||||||||||||||||||| Sbjct: 37381 ggaagaagaaaaggaagagga 37401
>gb|AC092875.2| Sus scrofa clone RP44-476K1, complete sequence Length = 155710 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 87 gaagaagaaaaggaagaggataatg 111 ||||||||||| ||||||||||||| Sbjct: 27499 gaagaagaaaaagaagaggataatg 27523
>emb|AM055943.1| Toxoplasma gondii, strain RH, genomic DNA chromosome Ib Length = 2013089 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 86 ggaagaagaaaaggaagagga 106 ||||||||||||||||||||| Sbjct: 493657 ggaagaagaaaaggaagagga 493677
>gb|AC140442.4| Mus musculus BAC clone RP24-106P1 from 12, complete sequence Length = 153574 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 86 ggaagaagaaaaggaagagga 106 ||||||||||||||||||||| Sbjct: 27762 ggaagaagaaaaggaagagga 27742
>gb|BC083571.1| Rattus norvegicus progesterone receptor membrane component 2, mRNA (cDNA clone MGC:93874 IMAGE:7112203), complete cds Length = 1974 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 86 ggaagaagaaaaggaagagga 106 ||||||||||||||||||||| Sbjct: 990 ggaagaagaaaaggaagagga 970
>emb|AL831741.16| Mouse DNA sequence from clone RP23-337N2 on chromosome 4, complete sequence Length = 213347 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 86 ggaagaagaaaaggaagagga 106 ||||||||||||||||||||| Sbjct: 130213 ggaagaagaaaaggaagagga 130193
>ref|NM_001008374.1| Rattus norvegicus progesterone receptor membrane component 2 (Pgrmc2), mRNA Length = 1974 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 86 ggaagaagaaaaggaagagga 106 ||||||||||||||||||||| Sbjct: 990 ggaagaagaaaaggaagagga 970
>gb|AC135017.3| Mus musculus BAC clone RP24-254D14 from 1, complete sequence Length = 190598 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 86 ggaagaagaaaaggaagagga 106 ||||||||||||||||||||| Sbjct: 106737 ggaagaagaaaaggaagagga 106717
>gb|AC132230.3| Mus musculus BAC clone RP24-484C13 from 1, complete sequence Length = 177845 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 86 ggaagaagaaaaggaagagga 106 ||||||||||||||||||||| Sbjct: 119725 ggaagaagaaaaggaagagga 119705
>gb|AC132431.3| Mus musculus BAC clone RP23-211M23 from 6, complete sequence Length = 207155 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 86 ggaagaagaaaaggaagagga 106 ||||||||||||||||||||| Sbjct: 126769 ggaagaagaaaaggaagagga 126789
>gb|AC131693.5| Mus musculus BAC clone RP23-391D10 from 14, complete sequence Length = 220202 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 86 ggaagaagaaaaggaagagga 106 ||||||||||||||||||||| Sbjct: 85741 ggaagaagaaaaggaagagga 85761
>gb|U35312.1|MMU35312 Mus musculus nuclear receptor co-repressor mRNA, complete cds Length = 7780 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 89 agaagaaaaggaagaggataa 109 ||||||||||||||||||||| Sbjct: 1658 agaagaaaaggaagaggataa 1678
>gb|AC163040.5| Mus musculus BAC clone RP23-71C23 from chromosome 12, complete sequence Length = 235086 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 86 ggaagaagaaaaggaagagga 106 ||||||||||||||||||||| Sbjct: 196559 ggaagaagaaaaggaagagga 196539
>emb|AL611924.14| Mouse DNA sequence from clone RP23-106K5 on chromosome 4, complete sequence Length = 164958 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 86 ggaagaagaaaaggaagagga 106 ||||||||||||||||||||| Sbjct: 53858 ggaagaagaaaaggaagagga 53878
>emb|AL713881.1|CNS07YOX Mus musculus chromosome 11 region in the Om locus area (D11Mit37-Scya6) clone 527G2 of library Caltech CITB-BAC from chromosome 11 of Mus musculus (mouse) Length = 143241 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 86 ggaagaagaaaaggaagagga 106 ||||||||||||||||||||| Sbjct: 89517 ggaagaagaaaaggaagagga 89537
>emb|AL590968.8| Mouse DNA sequence from clone RP23-392I3 on chromosome 11, complete sequence Length = 217092 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 86 ggaagaagaaaaggaagagga 106 ||||||||||||||||||||| Sbjct: 200110 ggaagaagaaaaggaagagga 200130
>emb|X53616.1|CDPP90 C.domesticus calnexin (pp90) mRNA Length = 3302 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 86 ggaagaagaaaaggaagagga 106 ||||||||||||||||||||| Sbjct: 1685 ggaagaagaaaaggaagagga 1705
>emb|AL824705.5| Mouse DNA sequence from clone RP23-102G9 on chromosome 4, complete sequence Length = 144458 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 136 aagtaatggaggagaagagga 156 ||||||||||||||||||||| Sbjct: 79793 aagtaatggaggagaagagga 79813
>emb|AL713886.1|CNS07YOY Mus musculus chromosome 11 region in the Om locus area (D11Mit37-Scya6) clone 247A17 of library Caltech CITB-BAC from chromosome 11 of Mus musculus (mouse) Length = 126128 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 86 ggaagaagaaaaggaagagga 106 ||||||||||||||||||||| Sbjct: 22938 ggaagaagaaaaggaagagga 22958
>gb|AC108429.11| Mus musculus chromosome 7, clone RP23-161B5, complete sequence Length = 186903 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 84 gtggaagaagaaaaggaaga 103 |||||||||||||||||||| Sbjct: 45092 gtggaagaagaaaaggaaga 45073
>ref|NM_121946.1| Arabidopsis thaliana ATPase, coupled to transmembrane movement of substances AT5G19410 mRNA, complete cds Length = 1875 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 87 gaagaagaaaaggaagagga 106 |||||||||||||||||||| Sbjct: 125 gaagaagaaaaggaagagga 106
>ref|XM_519350.1| PREDICTED: Pan troglodytes similar to GRIP and coiled-coil domain-containing protein 1 (Golgi coiled coil protein 1) (LOC463697), mRNA Length = 2130 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 360 aagcctgctgaaggagaaag 379 |||||||||||||||||||| Sbjct: 129 aagcctgctgaaggagaaag 148
>ref|NM_028900.2| Mus musculus golgi coiled coil 1 (Gcc1), mRNA Length = 4051 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 360 aagcctgctgaaggagaaag 379 |||||||||||||||||||| Sbjct: 537 aagcctgctgaaggagaaag 556
>gb|U89573.1|RNU89573 Rattus norvegicus microsatellite sequence D0Mco44 Length = 305 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 110 tgagatgactcttgatgaat 129 |||||||||||||||||||| Sbjct: 189 tgagatgactcttgatgaat 170
>ref|XM_594166.2| PREDICTED: Bos taurus calnexin (canx), partial mRNA Length = 4099 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 87 gaagaagaaaaggaagagga 106 |||||||||||||||||||| Sbjct: 1136 gaagaagaaaaggaagagga 1155
>gb|BC066807.1| Mus musculus golgi coiled coil 1, mRNA (cDNA clone MGC:76506 IMAGE:30101518), complete cds Length = 4048 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 360 aagcctgctgaaggagaaag 379 |||||||||||||||||||| Sbjct: 506 aagcctgctgaaggagaaag 525
>gb|AC079936.7| Oryza sativa (japonica cultivar-group) chromosome X clone OSJNBb0061I18, complete sequence Length = 143163 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 aaaaggaagaggataatgag 113 |||||||||||||||||||| Sbjct: 142858 aaaaggaagaggataatgag 142839
>gb|AC078839.4| Oryza sativa (japonica cultivar-group) chromosome X clone OSJNBa0094J09, complete sequence Length = 168192 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 94 aaaaggaagaggataatgag 113 |||||||||||||||||||| Sbjct: 160473 aaaaggaagaggataatgag 160492
>gb|BC081184.1| Xenopus laevis MGC84407 protein, mRNA (cDNA clone MGC:84407 IMAGE:7019024), complete cds Length = 3852 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 142 tggaggagaagaggaaagca 161 |||||||||||||||||||| Sbjct: 1170 tggaggagaagaggaaagca 1189
>gb|AC123658.9| Mus musculus chromosome 15, clone RP23-192C13, complete sequence Length = 211158 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 87 gaagaagaaaaggaagagga 106 |||||||||||||||||||| Sbjct: 13255 gaagaagaaaaggaagagga 13274 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 87 gaagaagaaaaggaagagga 106 |||||||||||||||||||| Sbjct: 13162 gaagaagaaaaggaagagga 13181
>gb|AC114459.6| Rattus norvegicus 4 BAC CH230-388N23 (Children's Hospital Oakland Research Institute) complete sequence Length = 190345 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 87 gaagaagaaaaggaagagga 106 |||||||||||||||||||| Sbjct: 6544 gaagaagaaaaggaagagga 6525
>ref|XM_416732.1| PREDICTED: Gallus gallus similar to SH3 domain-binding glutamic acid-rich protein (SH3BGR protein) (21-glutamic acid-rich protein) (21-GARP) (LOC418523), mRNA Length = 1217 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 86 ggaagaagaaaaggaagagg 105 |||||||||||||||||||| Sbjct: 629 ggaagaagaaaaggaagagg 648
>gb|AC163769.4| Pan troglodytes BAC clone CH251-59O12 from chromosome unknown, complete sequence Length = 185010 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 87 gaagaagaaaaggaagagga 106 |||||||||||||||||||| Sbjct: 141093 gaagaagaaaaggaagagga 141074
>gb|AC182400.3| Pan troglodytes BAC clone CH251-86D19 from chromosome 8, complete sequence Length = 150420 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 87 gaagaagaaaaggaagagga 106 |||||||||||||||||||| Sbjct: 128918 gaagaagaaaaggaagagga 128937
>gb|AC068608.5| Mus musculus strain C57BL6/J chromosome 6 clone RP23-434O14, complete sequence Length = 191358 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 360 aagcctgctgaaggagaaag 379 |||||||||||||||||||| Sbjct: 56590 aagcctgctgaaggagaaag 56571
>gb|AC100378.10| Mus musculus chromosome 10, clone RP23-130O4, complete sequence Length = 218363 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 87 gaagaagaaaaggaagagga 106 |||||||||||||||||||| Sbjct: 24440 gaagaagaaaaggaagagga 24421
>ref|XM_711792.1| Candida albicans SC5314 putative protein disulfide isomerase (CaO19_12595), mRNA Length = 1683 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 84 gtggaagaagaaaaggaaga 103 |||||||||||||||||||| Sbjct: 1603 gtggaagaagaaaaggaaga 1622
>gb|AC146249.2| Pan troglodytes BAC clone CH251-140O11 from Y, complete sequence Length = 173078 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 87 gaagaagaaaaggaagagga 106 |||||||||||||||||||| Sbjct: 125290 gaagaagaaaaggaagagga 125271
>gb|AC122895.5| Mus musculus BAC clone RP23-69K14 from chromosome 18, complete sequence Length = 215539 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 87 gaagaagaaaaggaagagga 106 |||||||||||||||||||| Sbjct: 114210 gaagaagaaaaggaagagga 114229 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 87 gaagaagaaaaggaagagga 106 |||||||||||||||||||| Sbjct: 113492 gaagaagaaaaggaagagga 113511
>ref|XM_451299.1| Kluyveromyces lactis NRRL Y-1140, KLLA0A06710g predicted mRNA Length = 1272 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 87 gaagaagaaaaggaagagga 106 |||||||||||||||||||| Sbjct: 481 gaagaagaaaaggaagagga 500
>gb|AC132844.7| Mus musculus chromosome 17, clone RP24-481P13, complete sequence Length = 225183 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 238 ccaagaaaggaaatgatgaggttt 261 ||||| |||||||||||||||||| Sbjct: 3273 ccaaggaaggaaatgatgaggttt 3296
>gb|AC107531.8| Rattus norvegicus 1 BAC CH230-158N3 (Children's Hospital Oakland Research Institute) complete sequence Length = 173190 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 89 agaagaaaaggaagaggataatga 112 |||||||||||||||||| ||||| Sbjct: 56349 agaagaaaaggaagaggaaaatga 56326
>gb|AY560385.1| Tagetes minuta thermoinhibition-associated THB-4 protein mRNA, partial cds Length = 345 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 102 gaggataatgagatgactcttgatgaat 129 |||||||| |||||||||||||| |||| Sbjct: 37 gaggataaggagatgactcttgaagaat 64
>gb|AC167229.4| Mus musculus BAC RP24-337D17 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 197711 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 87 gaagaagaaaaggaagagga 106 |||||||||||||||||||| Sbjct: 49325 gaagaagaaaaggaagagga 49306
>gb|BC059616.1| Danio rerio hypothetical protein LOC402878, mRNA (cDNA clone IMAGE:4786972), partial cds Length = 1217 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 142 tggaggagaagaggaaagca 161 |||||||||||||||||||| Sbjct: 1126 tggaggagaagaggaaagca 1145
>gb|AC147243.2| Mus musculus BAC clone RP23-444P22 from chromosome 6, complete sequence Length = 181025 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 140 aatggaggagaagaggaaag 159 |||||||||||||||||||| Sbjct: 131173 aatggaggagaagaggaaag 131192
>gb|AC139940.5| Mus musculus chromosome 15, clone RP23-468K16, complete sequence Length = 212183 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 87 gaagaagaaaaggaagagga 106 |||||||||||||||||||| Sbjct: 163834 gaagaagaaaaggaagagga 163853 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 87 gaagaagaaaaggaagagga 106 |||||||||||||||||||| Sbjct: 163741 gaagaagaaaaggaagagga 163760
>gb|AC133950.4| Mus musculus BAC clone RP24-243C16 from chromosome 7, complete sequence Length = 176244 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 84 gtggaagaagaaaaggaaga 103 |||||||||||||||||||| Sbjct: 161697 gtggaagaagaaaaggaaga 161678
>ref|XM_822401.1| Trypanosoma brucei TREU927 ATP-dependent DEAD/H RNA helicase (Tb09.211.3510) partial mRNA Length = 2208 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 393 cgaggccgtggcggcagggg 412 |||||||||||||||||||| Sbjct: 235 cgaggccgtggcggcagggg 254
>gb|AC121833.3| Mus musculus BAC clone RP24-69C16 from chromosome 3, complete sequence Length = 224456 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 87 gaagaagaaaaggaagagga 106 |||||||||||||||||||| Sbjct: 38206 gaagaagaaaaggaagagga 38187
>gb|AC129012.4| Mus musculus BAC clone RP24-545L10 from chromosome 10, complete sequence Length = 143029 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 87 gaagaagaaaaggaagagga 106 |||||||||||||||||||| Sbjct: 41855 gaagaagaaaaggaagagga 41874
>ref|XM_804721.1| Trypanosoma cruzi strain CL Brener cytoskeleton-associated protein CAP5.5 (Tc00.1047053508555.60) partial mRNA Length = 2421 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 87 gaagaagaaaaggaagagga 106 |||||||||||||||||||| Sbjct: 2185 gaagaagaaaaggaagagga 2204
>ref|XM_807409.1| Trypanosoma cruzi strain CL Brener glycosyl hydrolase-like protein (Tc00.1047053510283.70) partial mRNA Length = 3168 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 82 ttgtggaagaagaaaaggaagagg 105 |||||||||| ||||||||||||| Sbjct: 605 ttgtggaagaggaaaaggaagagg 628
>gb|AC125175.4| Mus musculus BAC clone RP24-572I8 from chromosome 6, complete sequence Length = 167991 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 140 aatggaggagaagaggaaag 159 |||||||||||||||||||| Sbjct: 2028 aatggaggagaagaggaaag 2047
>gb|AC121979.3| Mus musculus BAC clone RP24-289L14 from chromosome 9, complete sequence Length = 155274 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 87 gaagaagaaaaggaagagga 106 |||||||||||||||||||| Sbjct: 123140 gaagaagaaaaggaagagga 123159
>gb|AC122837.4| Mus musculus BAC clone RP23-189N3 from 16, complete sequence Length = 199988 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 87 gaagaagaaaaggaagagga 106 |||||||||||||||||||| Sbjct: 133678 gaagaagaaaaggaagagga 133659
>ref|XM_883840.1| Candida albicans SC5314 hypothetical protein (CaJ7.0374) partial mRNA Length = 1683 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 84 gtggaagaagaaaaggaaga 103 |||||||||||||||||||| Sbjct: 1603 gtggaagaagaaaaggaaga 1622
>ref|XM_711860.1| Candida albicans SC5314 protein disulfide isomerase (PDI1) partial mRNA Length = 1683 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 84 gtggaagaagaaaaggaaga 103 |||||||||||||||||||| Sbjct: 1603 gtggaagaagaaaaggaaga 1622
>gb|AC102567.8| Mus musculus chromosome 9, clone RP23-224F1, complete sequence Length = 198097 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 87 gaagaagaaaaggaagagga 106 |||||||||||||||||||| Sbjct: 127954 gaagaagaaaaggaagagga 127973
>gb|AC004932.4| Homo sapiens PAC clone RP5-943F2 from 7, complete sequence Length = 151183 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 140 aatggaggagaagaggaaag 159 |||||||||||||||||||| Sbjct: 119121 aatggaggagaagaggaaag 119102
>gb|AC019210.7| Homo sapiens BAC clone RP11-449G3 from 7, complete sequence Length = 177402 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 87 gaagaagaaaaggaagagga 106 |||||||||||||||||||| Sbjct: 91663 gaagaagaaaaggaagagga 91682
>gb|AC011228.9| Homo sapiens BAC clone GS1-18A18 from 7, complete sequence Length = 163782 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 87 gaagaagaaaaggaagagga 106 |||||||||||||||||||| Sbjct: 93151 gaagaagaaaaggaagagga 93170
>gb|AC164089.4| Mus musculus BAC clone RP23-70G12 from chromosome 3, complete sequence Length = 223387 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 87 gaagaagaaaaggaagagga 106 |||||||||||||||||||| Sbjct: 118619 gaagaagaaaaggaagagga 118600
>ref|XM_660364.1| Cryptosporidium hominis TU502 hypothetical protein (Chro.30409) partial mRNA Length = 2958 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 87 gaagaagaaaaggaagagga 106 |||||||||||||||||||| Sbjct: 634 gaagaagaaaaggaagagga 653
>gb|AC109210.26| Mus musculus chromosome 7, clone RP23-9C7, complete sequence Length = 236592 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 87 gaagaagaaaaggaagagga 106 |||||||||||||||||||| Sbjct: 57678 gaagaagaaaaggaagagga 57659
>gb|AY710267.1| Banana virus X RNA-dependent RNA polymerase gene, partial cds; and triple gene block protein 1, triple gene block protein 2, triple gene block protein 3, and capsid protein genes, complete cds Length = 2917 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 233 ttccaccaagaaaggaaatg 252 |||||||||||||||||||| Sbjct: 2164 ttccaccaagaaaggaaatg 2183
>gb|BC021462.1| Mus musculus golgi coiled coil 1, mRNA (cDNA clone IMAGE:5054618), complete cds Length = 1363 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 360 aagcctgctgaaggagaaag 379 |||||||||||||||||||| Sbjct: 397 aagcctgctgaaggagaaag 416
>gb|AC146910.16| Medicago truncatula clone mth2-59i21, complete sequence Length = 109724 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 87 gaagaagaaaaggaagagga 106 |||||||||||||||||||| Sbjct: 50072 gaagaagaaaaggaagagga 50091
>emb|AL450106.11| Human DNA sequence from clone RP11-280P22 on chromosome 9, complete sequence Length = 49221 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 87 gaagaagaaaaggaagagga 106 |||||||||||||||||||| Sbjct: 36655 gaagaagaaaaggaagagga 36636
>emb|AL139095.15| Human DNA sequence from clone RP11-69L16 on chromosome 6 Contains the 3' end of the RREB1 gene for ras responsive element binding protein 1, part of a novel gene, the SSR1 gene for signal sequence receptor alpha (translocon-associated protein alpha), the ATP5GP1 pseudogene (ATPsynthase, H+ transporting, mitochondrial F0 complex, subunit c (subunit 9)), a ribosomal protein S3 pseudogene, the CAGE1 gene for cancer antigen 1, the 5' end of the RIOK1 gene for RIO kinase 1 (yeast) and three CpG islands, complete sequence Length = 167206 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 80 agttgtggaagaagaaaaggaaga 103 |||||||||||||||||| ||||| Sbjct: 130498 agttgtggaagaagaaaatgaaga 130475
>gb|AC119618.4| Homo sapiens X BAC RP11-430A19 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 76836 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 75 gctgcagttgtggaagaaga 94 |||||||||||||||||||| Sbjct: 29764 gctgcagttgtggaagaaga 29745
>gb|AC157990.4| Mus musculus chromosome 5, clone RP24-307I24, complete sequence Length = 153860 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 87 gaagaagaaaaggaagagga 106 |||||||||||||||||||| Sbjct: 119457 gaagaagaaaaggaagagga 119476
>ref|XM_792752.1| PREDICTED: Strongylocentrotus purpuratus similar to deleted in malignant brain tumors 1 isoform b precursor (LOC593270), mRNA Length = 894 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 159 gcacttgatgctttgaagaa 178 |||||||||||||||||||| Sbjct: 353 gcacttgatgctttgaagaa 334
>ref|XM_780125.1| PREDICTED: Strongylocentrotus purpuratus similar to translocation protein 1 (LOC580046), partial mRNA Length = 495 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 294 aagaagaaagagaatgctga 313 |||||||||||||||||||| Sbjct: 28 aagaagaaagagaatgctga 47
>emb|Z97342.2|ATFCA7 Arabidopsis thaliana DNA chromosome 4, ESSA I FCA contig fragment No. 7 Length = 201471 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 337 ctgtgagcatcaacgagttcctgaagcc 364 ||||||||||||| ||||| |||||||| Sbjct: 34983 ctgtgagcatcaatgagtttctgaagcc 35010 Score = 40.1 bits (20), Expect = 5.6 Identities = 35/40 (87%) Strand = Plus / Plus Query: 114 atgactcttgatgaatttgagaaagtaatggaggagaaga 153 |||||||||||||| | ||||||| || | |||||||||| Sbjct: 34611 atgactcttgatgagtatgagaaaatactcgaggagaaga 34650
>emb|CR859994.1| Pongo pygmaeus mRNA; cDNA DKFZp459H158 (from clone DKFZp459H158) Length = 4144 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 360 aagcctgctgaaggagaaag 379 |||||||||||||||||||| Sbjct: 542 aagcctgctgaaggagaaag 561
>emb|CR382126.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome F of strain NRRL Y-1140 of Kluyveromyces lactis Length = 2602197 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 87 gaagaagaaaaggaagagga 106 |||||||||||||||||||| Sbjct: 47087 gaagaagaaaaggaagagga 47068
>emb|CR382121.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome A of strain NRRL Y-1140 of Kluyveromyces lactis Length = 1062590 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 87 gaagaagaaaaggaagagga 106 |||||||||||||||||||| Sbjct: 608583 gaagaagaaaaggaagagga 608602
>emb|AL662969.3|OSJN00169 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0043L24, complete sequence Length = 164577 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 86 ggaagaagaaaaggaagagg 105 |||||||||||||||||||| Sbjct: 139609 ggaagaagaaaaggaagagg 139628
>emb|AL161545.2|ATCHRIV45 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 45 Length = 199548 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 337 ctgtgagcatcaacgagttcctgaagcc 364 ||||||||||||| ||||| |||||||| Sbjct: 20812 ctgtgagcatcaatgagtttctgaagcc 20839 Score = 40.1 bits (20), Expect = 5.6 Identities = 35/40 (87%) Strand = Plus / Plus Query: 114 atgactcttgatgaatttgagaaagtaatggaggagaaga 153 |||||||||||||| | ||||||| || | |||||||||| Sbjct: 20440 atgactcttgatgagtatgagaaaatactcgaggagaaga 20479
>gb|AC164623.4| Mus musculus 10 BAC RP24-401L24 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 172657 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 126 gaatttgagaaagtaatgga 145 |||||||||||||||||||| Sbjct: 164520 gaatttgagaaagtaatgga 164539
>emb|AL645596.7| Mouse DNA sequence from clone RP23-301E19 on chromosome 11 Contains the Ccl11 and Ccl12 genes for chemokine (C-C motif) ligand 11 and 12, complete sequence Length = 63924 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 87 gaagaagaaaaggaagagga 106 |||||||||||||||||||| Sbjct: 3090 gaagaagaaaaggaagagga 3071
>gb|BC014100.2| Homo sapiens GRIP and coiled-coil domain containing 1, mRNA (cDNA clone MGC:20706 IMAGE:2988591), complete cds Length = 4153 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 360 aagcctgctgaaggagaaag 379 |||||||||||||||||||| Sbjct: 547 aagcctgctgaaggagaaag 566
>dbj|BS000599.1| Pan troglodytes chromosome Y clone:PTB-225K16, complete sequences Length = 105000 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 87 gaagaagaaaaggaagagga 106 |||||||||||||||||||| Sbjct: 18360 gaagaagaaaaggaagagga 18341
>gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence Length = 23952694 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 87 gaagaagaaaaggaagagga 106 |||||||||||||||||||| Sbjct: 22408249 gaagaagaaaaggaagagga 22408268
>gb|AC148241.21| Medicago truncatula clone mth2-14m21, complete sequence Length = 119208 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 120 cttgatgaatttgagaaagt 139 |||||||||||||||||||| Sbjct: 2572 cttgatgaatttgagaaagt 2591
>dbj|AK092878.1| Homo sapiens cDNA FLJ35559 fis, clone SPLEN2005009 Length = 3587 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 360 aagcctgctgaaggagaaag 379 |||||||||||||||||||| Sbjct: 3 aagcctgctgaaggagaaag 22
>gb|AF110227.1| Arabidopsis thaliana nuclear RNA binding protein (RGGA) gene, complete cds Length = 1688 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 337 ctgtgagcatcaacgagttcctgaagcc 364 ||||||||||||| ||||| |||||||| Sbjct: 1501 ctgtgagcatcaatgagtttctgaagcc 1528 Score = 40.1 bits (20), Expect = 5.6 Identities = 35/40 (87%) Strand = Plus / Plus Query: 114 atgactcttgatgaatttgagaaagtaatggaggagaaga 153 |||||||||||||| | ||||||| || | |||||||||| Sbjct: 1129 atgactcttgatgagtatgagaaaatactcgaggagaaga 1168
>gb|AC021915.11| Homo sapiens chromosome 8, clone RP11-26M5, complete sequence Length = 183101 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 240 aagaaaggaaatgatgaggt 259 |||||||||||||||||||| Sbjct: 83637 aagaaaggaaatgatgaggt 83656
>gb|AC104967.4| Homo sapiens chromosome 8, clone CTD-2306F16, complete sequence Length = 144098 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 87 gaagaagaaaaggaagagga 106 |||||||||||||||||||| Sbjct: 44737 gaagaagaaaaggaagagga 44718
>gb|AC159910.6| Mus musculus 10 BAC RP23-353C6 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 219861 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 87 gaagaagaaaaggaagagga 106 |||||||||||||||||||| Sbjct: 39509 gaagaagaaaaggaagagga 39528
>gb|AC026182.4| Homo sapiens chromosome 3 clone RP11-279B12 map 3p, complete sequence Length = 167179 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 107 taatgagatgactcttgatg 126 |||||||||||||||||||| Sbjct: 23109 taatgagatgactcttgatg 23090
>gb|AC012294.15| Mus musculus chromosome 11, clone RP23-328G11, complete sequence Length = 222121 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 87 gaagaagaaaaggaagagga 106 |||||||||||||||||||| Sbjct: 89733 gaagaagaaaaggaagagga 89752
>gb|AC091785.5| Genomic sequence for Mus musculus, clone RP23-349P1, complete sequence Length = 178271 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 140 aatggaggagaagaggaaag 159 |||||||||||||||||||| Sbjct: 123848 aatggaggagaagaggaaag 123829
>gb|AC104806.3| Homo sapiens BAC clone RP11-584P21 from 4, complete sequence Length = 147777 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 87 gaagaagaaaaggaagagga 106 |||||||||||||||||||| Sbjct: 4624 gaagaagaaaaggaagagga 4605
>gb|AC140227.7| Mus musculus BAC clone RP24-487N2 from chromosome 8, complete sequence Length = 188262 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 86 ggaagaagaaaaggaagagg 105 |||||||||||||||||||| Sbjct: 144360 ggaagaagaaaaggaagagg 144379
>ref|NM_024523.5| Homo sapiens GRIP and coiled-coil domain containing 1 (GCC1), mRNA Length = 4152 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 360 aagcctgctgaaggagaaag 379 |||||||||||||||||||| Sbjct: 547 aagcctgctgaaggagaaag 566
>ref|XM_691401.1| PREDICTED: Danio rerio hypothetical protein LOC402878 (LOC402878), mRNA Length = 1935 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 142 tggaggagaagaggaaagca 161 |||||||||||||||||||| Sbjct: 1121 tggaggagaagaggaaagca 1140
>gb|AC155322.5| Mus musculus 10 BAC RP24-149J3 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 187016 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 126 gaatttgagaaagtaatgga 145 |||||||||||||||||||| Sbjct: 71059 gaatttgagaaagtaatgga 71078
>ref|XM_627144.1| Cryptosporidium parvum Iowa II Ser/Thr protein kinase (cgd8_2430), partial mRNA Length = 1980 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 87 gaagaagaaaaggaagagga 106 |||||||||||||||||||| Sbjct: 160 gaagaagaaaaggaagagga 179
>gb|AC160759.4| Mus musculus BAC clone RP23-333K15 from chromosome 16, complete sequence Length = 190127 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 87 gaagaagaaaaggaagagga 106 |||||||||||||||||||| Sbjct: 44630 gaagaagaaaaggaagagga 44611
>gb|AC151987.4| Mus musculus BAC clone RP23-356C20 from chromosome 17, complete sequence Length = 245262 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 87 gaagaagaaaaggaagagga 106 |||||||||||||||||||| Sbjct: 104673 gaagaagaaaaggaagagga 104692
>gb|AC154902.2| Mus musculus BAC clone RP24-85I19 from chromosome 7, complete sequence Length = 213932 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 82 ttgtggaagaagaaaaggaa 101 |||||||||||||||||||| Sbjct: 136284 ttgtggaagaagaaaaggaa 136303
>gb|AC155301.2| Mus musculus BAC clone RP24-216J21 from chromosome 13, complete sequence Length = 192299 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 87 gaagaagaaaaggaagagga 106 |||||||||||||||||||| Sbjct: 125178 gaagaagaaaaggaagagga 125159
>dbj|AK016531.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:4932417P04 product:golgi coiled coil 1, full insert sequence Length = 2860 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 360 aagcctgctgaaggagaaag 379 |||||||||||||||||||| Sbjct: 486 aagcctgctgaaggagaaag 505
>dbj|AK032253.1| Mus musculus adult male olfactory brain cDNA, RIKEN full-length enriched library, clone:6430511O04 product:hypothetical GRIP domain containing protein, full insert sequence Length = 4051 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 360 aagcctgctgaaggagaaag 379 |||||||||||||||||||| Sbjct: 537 aagcctgctgaaggagaaag 556
>gb|AC044790.4|AC044790 Homo sapiens chromosome 11 clone RP11-141J21 containing NRXN2 (NRXN2) gene, partial cds; and RST and OAT4 genes, complete cds, complete sequence Length = 170114 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 87 gaagaagaaaaggaagagga 106 |||||||||||||||||||| Sbjct: 55708 gaagaagaaaaggaagagga 55689
>gb|AC000134.14| Homo sapiens Chromosome 11q13 BAC Clone 137c7, complete sequence Length = 203300 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 87 gaagaagaaaaggaagagga 106 |||||||||||||||||||| Sbjct: 13881 gaagaagaaaaggaagagga 13900
>gb|AC158634.5| Mus musculus 10 BAC RP23-424C16 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 169826 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 126 gaatttgagaaagtaatgga 145 |||||||||||||||||||| Sbjct: 76850 gaatttgagaaagtaatgga 76869
>emb|BX934008.2| Gallus gallus finished cDNA, clone ChEST58k10 Length = 1199 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 86 ggaagaagaaaaggaagagg 105 |||||||||||||||||||| Sbjct: 597 ggaagaagaaaaggaagagg 616
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 86 ggaagaagaaaaggaagagg 105 |||||||||||||||||||| Sbjct: 25413051 ggaagaagaaaaggaagagg 25413070
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 94 aaaaggaagaggataatgag 113 |||||||||||||||||||| Sbjct: 12361317 aaaaggaagaggataatgag 12361336
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 145 aggagaagaggaaagcacttgatg 168 ||||||||||||||| |||||||| Sbjct: 5218481 aggagaagaggaaaggacttgatg 5218458
>gb|AC114547.12| Mus musculus chromosome 8, clone RP24-68M15, complete sequence Length = 182611 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 86 ggaagaagaaaaggaagagg 105 |||||||||||||||||||| Sbjct: 43010 ggaagaagaaaaggaagagg 42991
>gb|AC092138.4| Homo sapiens chromosome 16 clone RP11-351A20, complete sequence Length = 189505 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 107 taatgagatgactcttgatg 126 |||||||||||||||||||| Sbjct: 70958 taatgagatgactcttgatg 70977
>gb|AC069019.8|AC069019 Mus musculus BAC RP23-455N13 (Roswell Park Cancer Institute Mouse BAC Library) complete sequence Length = 196175 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 87 gaagaagaaaaggaagagga 106 |||||||||||||||||||| Sbjct: 189973 gaagaagaaaaggaagagga 189992
>gb|AC108718.13| Homo sapiens 3 BAC RP11-246A10 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 66513 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 87 gaagaagaaaaggaagagga 106 |||||||||||||||||||| Sbjct: 20604 gaagaagaaaaggaagagga 20585
>gb|AC012065.8| Homo sapiens BAC clone RP11-130L8 from 2, complete sequence Length = 206021 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 85 tggaagaagaaaaggaagag 104 |||||||||||||||||||| Sbjct: 9055 tggaagaagaaaaggaagag 9036
>gb|AC073065.6| Homo sapiens BAC clone RP11-149O3 from 2, complete sequence Length = 175345 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 287 ggctttgaagaagaaagaga 306 |||||||||||||||||||| Sbjct: 66954 ggctttgaagaagaaagaga 66973
>gb|AF525417.1| Homo sapiens Golgi coiled coil protein 1 mRNA, complete cds Length = 2522 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 360 aagcctgctgaaggagaaag 379 |||||||||||||||||||| Sbjct: 322 aagcctgctgaaggagaaag 341
>gb|AY087413.1| Arabidopsis thaliana clone 35156 mRNA, complete sequence Length = 1399 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 340 tgagcatcaacgagttcctgaagcctgc 367 |||||||||||||||| ||||| ||||| Sbjct: 987 tgagcatcaacgagtttctgaaacctgc 1014
>ref|XM_575413.1| PREDICTED: Rattus norvegicus similar to GRIP and coiled-coil domain-containing protein 1 (Golgi coiled coil protein 1) (LOC500058), mRNA Length = 3652 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 360 aagcctgctgaaggagaaag 379 |||||||||||||||||||| Sbjct: 135 aagcctgctgaaggagaaag 154
>gb|AF296837.1|F7K24 Arabidopsis thaliana BAC F7K24 Length = 103024 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 87 gaagaagaaaaggaagagga 106 |||||||||||||||||||| Sbjct: 74103 gaagaagaaaaggaagagga 74122
>gb|AF296836.1|F28I16 Arabidopsis thaliana BAC F28I16 Length = 84334 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 88 aagaagaaaaggaagaggat 107 |||||||||||||||||||| Sbjct: 50879 aagaagaaaaggaagaggat 50860
>gb|AF296829.1|F3D18 Arabidopsis thaliana BAC F3D18 Length = 88126 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 87 gaagaagaaaaggaagagga 106 |||||||||||||||||||| Sbjct: 36617 gaagaagaaaaggaagagga 36636
>dbj|AP003260.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0468B07 Length = 169071 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 86 ggaagaagaaaaggaagaggataa 109 |||||||||| ||||||||||||| Sbjct: 92553 ggaagaagaagaggaagaggataa 92576
>gb|AC127286.3| Mus musculus BAC clone RP23-340I4 from chromosome unknown, complete sequence Length = 190953 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 87 gaagaagaaaaggaagagga 106 |||||||||||||||||||| Sbjct: 92812 gaagaagaaaaggaagagga 92831
>gb|AC133505.3| Mus musculus BAC clone RP24-176M20 from chromosome 16, complete sequence Length = 149947 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 87 gaagaagaaaaggaagagga 106 |||||||||||||||||||| Sbjct: 21958 gaagaagaaaaggaagagga 21977
>gb|AC020889.3|AC020889 Genomic sequence for Arabidopsis thaliana BAC T1N15 from chromosome I, complete sequence Length = 95295 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 124 atgaatttgagaaagtaatggaggagaa 151 |||| ||||| ||||||||||||||||| Sbjct: 81092 atgattttgataaagtaatggaggagaa 81065
>dbj|AP004991.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0016O19 Length = 169120 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 145 aggagaagaggaaagcacttgatg 168 ||||||||||||||| |||||||| Sbjct: 85203 aggagaagaggaaaggacttgatg 85180
>gb|AC153862.8| Mus musculus 10 BAC RP23-353K11 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 223830 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 86 ggaagaagaaaaggaagagg 105 |||||||||||||||||||| Sbjct: 215975 ggaagaagaaaaggaagagg 215956
>emb|BX005073.7| Zebrafish DNA sequence from clone CH211-129N18, complete sequence Length = 185849 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 87 gaagaagaaaaggaagaggataatgaga 114 ||||||||| | |||||||||||||||| Sbjct: 170245 gaagaagaacaagaagaggataatgaga 170218
>dbj|AB046433.1| Arabidopsis thaliana DNA, chromosome 5 centromere region, clone:F11C12 Length = 116966 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 87 gaagaagaaaaggaagagga 106 |||||||||||||||||||| Sbjct: 96428 gaagaagaaaaggaagagga 96447
>gb|AC018833.3|AC018833 Homo sapiens chromosome 3 clone RP11-497I24, complete sequence Length = 145976 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 107 taatgagatgactcttgatg 126 |||||||||||||||||||| Sbjct: 31523 taatgagatgactcttgatg 31542
>gb|AC000359.1|HSAC000359 Human cosmid g1572c264, complete sequence Length = 43394 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 360 aagcctgctgaaggagaaag 379 |||||||||||||||||||| Sbjct: 578 aagcctgctgaaggagaaag 559
>gb|AC000357.1|HSAC000357 Human cosmid g1572c101, complete sequence Length = 45309 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 360 aagcctgctgaaggagaaag 379 |||||||||||||||||||| Sbjct: 30642 aagcctgctgaaggagaaag 30623
>emb|AJ324296.1|HSA324296 Homo sapiens genomic sequence surrounding NotI site, clone NR5-DB14C Length = 759 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 360 aagcctgctgaaggagaaag 379 |||||||||||||||||||| Sbjct: 311 aagcctgctgaaggagaaag 330
>dbj|AK071916.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013071K12, full insert sequence Length = 2103 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 86 ggaagaagaaaaggaagaggataa 109 |||||||||| ||||||||||||| Sbjct: 40 ggaagaagaagaggaagaggataa 17
>emb|BX539328.4| Mouse DNA sequence from clone RP23-108I21 on chromosome X, complete sequence Length = 113887 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 87 gaagaagaaaaggaagagga 106 |||||||||||||||||||| Sbjct: 84192 gaagaagaaaaggaagagga 84173
>gb|AC154853.2| Mus musculus BAC clone RP23-21C15 from 17, complete sequence Length = 170353 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 238 ccaagaaaggaaatgatgaggttt 261 ||||| |||||||||||||||||| Sbjct: 93451 ccaaggaaggaaatgatgaggttt 93474
>gb|AC155813.2| Mus musculus BAC clone RP24-167L2 from 9, complete sequence Length = 166097 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 87 gaagaagaaaaggaagagga 106 |||||||||||||||||||| Sbjct: 28372 gaagaagaaaaggaagagga 28391
>gb|AC114614.9| Mus musculus chromosome 5, clone RP24-81J14, complete sequence Length = 206921 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 87 gaagaagaaaaggaagagga 106 |||||||||||||||||||| Sbjct: 101294 gaagaagaaaaggaagagga 101313
>gb|AC153891.6| Mus musculus 10 BAC RP23-415J15 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 198332 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 86 ggaagaagaaaaggaagagg 105 |||||||||||||||||||| Sbjct: 150036 ggaagaagaaaaggaagagg 150055
>gb|AC145869.2| Pan troglodytes BAC clone RP43-39F14 from chromosome 7, complete sequence Length = 201977 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 360 aagcctgctgaaggagaaag 379 |||||||||||||||||||| Sbjct: 103485 aagcctgctgaaggagaaag 103466
>gb|AY961425.1| Phytophthora infestans clone PA001A8 cathepsin-like cysteine protease mRNA, complete cds Length = 2055 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 90 gaagaaaaggaagaggataa 109 |||||||||||||||||||| Sbjct: 973 gaagaaaaggaagaggataa 992 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,646,389 Number of Sequences: 3902068 Number of extensions: 5646389 Number of successful extensions: 154743 Number of sequences better than 10.0: 279 Number of HSP's better than 10.0 without gapping: 280 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 153583 Number of HSP's gapped (non-prelim): 1147 length of query: 415 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 393 effective length of database: 17,147,199,772 effective search space: 6738849510396 effective search space used: 6738849510396 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
