ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal25i10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK066591.1| Oryza sativa (japonica cultivar-group) cDNA clon... 295 5e-77
2ref|XM_470256.1| Oryza sativa (japonica cultivar-group), predic... 291 9e-76
3gb|AY112221.1| Zea mays CL58622_1 mRNA sequence 230 3e-57
4gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 212 6e-52
5gb|AC099401.2| Oryza sativa (japonica cultivar-group) chromosome... 212 6e-52
6dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 212 6e-52
7emb|CT009545.5| M.truncatula DNA sequence from clone MTH2-107B14... 42 1.3
8gb|AC137744.2| Oryza sativa (japonica cultivar-group) chromosome... 42 1.3
9dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.3
10emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome 42 1.3
11gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 42 1.3
12ref|XM_468503.1| Oryza sativa (japonica cultivar-group), mRNA 40 5.2
13gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome 40 5.2
14emb|X61927.1|PCPPC1 P.cepacia plasmid PPC1 DNA 40 5.2
15emb|BX842584.1| Mycobacterium tuberculosis H37Rv complete genome... 40 5.2
16emb|BX248347.1| Mycobacterium bovis subsp. bovis AF2122/97 compl... 40 5.2
17gb|AC008577.7| Homo sapiens chromosome 5 clone CTC-558D17, compl... 40 5.2
18gb|AC011208.5|AC011208 Homo sapiens chromosome 18, clone RP11-13... 40 5.2
19dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.2
20dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.2
21gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 40 5.2
22dbj|AP004776.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.2
23gb|AE004994.1| Halobacterium sp. NRC-1 section 25 of 170 of the ... 40 5.2
24ref|XM_561331.1| Anopheles gambiae str. PEST ENSANGP00000025558 ... 40 5.2
25dbj|AK069159.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.2
26gb|AY859695.1| Mycobacterium conceptionae CIP 108544 RNA polymer... 40 5.2
27emb|AL606654.3|OSJN00100 Oryza sativa genomic DNA, chromosome 4,... 40 5.2
28gb|AD000012.1|MSGY126 Mycobacterium tuberculosis sequence from c... 40 5.2
29dbj|AP004482.1| Lotus japonicus genomic DNA, chromosome 6, clone... 40 5.2 
>dbj|AK066591.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013073D03, full
            insert sequence
          Length = 1341

 Score =  295 bits (149), Expect = 5e-77
 Identities = 253/285 (88%), Gaps = 2/285 (0%)
 Strand = Plus / Plus

                                                                        
Query: 1    tgagcagggtgtacgcggcgccgccggnaggnagaggaagaagcgcatctacaacaccgc 60
            ||||||||||||||||||| ||||||| ||| ||||||||||||||||||||| ||| ||
Sbjct: 845  tgagcagggtgtacgcggccccgccgg-agg-agaggaagaagcgcatctacagcacggc 902

                                                                        
Query: 61   gccctccaagttcaccaccatcgaccagtctagcgggctggggttcaggcttgtgaggat 120
            ||||||||| ||||||||||| || |||  ||||||||||||||||||| | ||||||||
Sbjct: 903  gccctccaaattcaccaccattgatcagaatagcgggctggggttcagggtggtgaggat 962

                                                                        
Query: 121  ggggttcgaggacatgtacctgggcagcccaggaggaatgtacgacaagttcggcaacga 180
            ||||| |||||||||||||||| ||||||| || |  ||||||   ||||||||||| ||
Sbjct: 963  ggggtacgaggacatgtacctgtgcagcccgggggagatgtacaggaagttcggcaagga 1022

                                                                        
Query: 181  ctacttcctctgcaccgggccggcgtccatcctcgtgcccgtcgtcgtcggccccggcga 240
            ||||||||| ||||||||| |||||||||| || ||||| || ||||||  |||||||||
Sbjct: 1023 ctacttcctgtgcaccgggacggcgtccatgctggtgccggtggtcgtcaaccccggcga 1082

                                                         
Query: 241  ggagtggaggggggcgcaggtcatcgagcacgacaacttgtaact 285
            ||||||||||| ||||||||||||||||||||||||| |||||||
Sbjct: 1083 ggagtggagggcggcgcaggtcatcgagcacgacaacctgtaact 1127
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>ref|XM_470256.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1200

 Score =  291 bits (147), Expect = 9e-76
 Identities = 251/283 (88%), Gaps = 2/283 (0%)
 Strand = Plus / Plus

                                                                        
Query: 1    tgagcagggtgtacgcggcgccgccggnaggnagaggaagaagcgcatctacaacaccgc 60
            ||||||||||||||||||| ||||||| ||| ||||||||||||||||||||| ||| ||
Sbjct: 920  tgagcagggtgtacgcggccccgccgg-agg-agaggaagaagcgcatctacagcacggc 977

                                                                        
Query: 61   gccctccaagttcaccaccatcgaccagtctagcgggctggggttcaggcttgtgaggat 120
            ||||||||| ||||||||||| || |||  ||||||||||||||||||| | ||||||||
Sbjct: 978  gccctccaaattcaccaccattgatcagaatagcgggctggggttcagggtggtgaggat 1037

                                                                        
Query: 121  ggggttcgaggacatgtacctgggcagcccaggaggaatgtacgacaagttcggcaacga 180
            ||||| |||||||||||||||| ||||||| || |  ||||||   ||||||||||| ||
Sbjct: 1038 ggggtacgaggacatgtacctgtgcagcccgggggagatgtacaggaagttcggcaagga 1097

                                                                        
Query: 181  ctacttcctctgcaccgggccggcgtccatcctcgtgcccgtcgtcgtcggccccggcga 240
            ||||||||| ||||||||| |||||||||| || ||||| || ||||||  |||||||||
Sbjct: 1098 ctacttcctgtgcaccgggacggcgtccatgctggtgccggtggtcgtcaaccccggcga 1157

                                                       
Query: 241  ggagtggaggggggcgcaggtcatcgagcacgacaacttgtaa 283
            ||||||||||| ||||||||||||||||||||||||| |||||
Sbjct: 1158 ggagtggagggcggcgcaggtcatcgagcacgacaacctgtaa 1200
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>gb|AY112221.1| Zea mays CL58622_1 mRNA sequence
          Length = 883

 Score =  230 bits (116), Expect = 3e-57
 Identities = 214/249 (85%)
 Strand = Plus / Minus

                                                                       
Query: 33  agaggaagaagcgcatctacaacaccgcgccctccaagttcaccaccatcgaccagtcta 92
           |||||||||||||| |||||| ||||||||| ||||||||       ||||| |||| ||
Sbjct: 385 agaggaagaagcgcgtctacagcaccgcgccgtccaagttnnnnnnnatcgatcagtata 326

                                                                       
Query: 93  gcgggctggggttcaggcttgtgaggatggggttcgaggacatgtacctgggcagcccag 152
           ||||||| ||||||||||| |||||||||||||||||||||||||||||  ||||||| |
Sbjct: 325 gcgggctcgggttcaggctggtgaggatggggttcgaggacatgtacctctgcagcccgg 266

                                                                       
Query: 153 gaggaatgtacgacaagttcggcaacgactacttcctctgcaccgggccggcgtccatcc 212
           |||| ||||||| |||||||||||| |||||||| || ||||| |||  |||||||||  
Sbjct: 265 gaggcatgtacgccaagttcggcaaggactactttctgtgcacggggatggcgtccatgt 206

                                                                       
Query: 213 tcgtgcccgtcgtcgtcggccccggcgaggagtggaggggggcgcaggtcatcgagcacg 272
           | |||||||| ||||||  ||||||||||||||||| || |||||||||||| ||||| |
Sbjct: 205 tggtgcccgttgtcgtcaaccccggcgaggagtggaaggcggcgcaggtcatagagcatg 146

                    
Query: 273 acaacttgt 281
           |||||||||
Sbjct: 145 acaacttgt 137
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  212 bits (107), Expect = 6e-52
 Identities = 173/195 (88%)
 Strand = Plus / Minus

                                                                           
Query: 91      tagcgggctggggttcaggcttgtgaggatggggttcgaggacatgtacctgggcagccc 150
               ||||||||||||||||||| | ||||||||||||| |||||||||||||||| |||||||
Sbjct: 3102406 tagcgggctggggttcagggtggtgaggatggggtacgaggacatgtacctgtgcagccc 3102347

                                                                           
Query: 151     aggaggaatgtacgacaagttcggcaacgactacttcctctgcaccgggccggcgtccat 210
                || |  ||||||   ||||||||||| ||||||||||| ||||||||| ||||||||||
Sbjct: 3102346 gggggagatgtacaggaagttcggcaaggactacttcctgtgcaccgggacggcgtccat 3102287

                                                                           
Query: 211     cctcgtgcccgtcgtcgtcggccccggcgaggagtggaggggggcgcaggtcatcgagca 270
                || ||||| || ||||||  |||||||||||||||||||| ||||||||||||||||||
Sbjct: 3102286 gctggtgccggtggtcgtcaaccccggcgaggagtggagggcggcgcaggtcatcgagca 3102227

                              
Query: 271     cgacaacttgtaact 285
               ||||||| |||||||
Sbjct: 3102226 cgacaacctgtaact 3102212



 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 75/81 (92%), Gaps = 2/81 (2%)
 Strand = Plus / Minus

                                                                           
Query: 1       tgagcagggtgtacgcggcgccgccggnaggnagaggaagaagcgcatctacaacaccgc 60
               ||||||||||||||||||| ||||||| ||| ||||||||||||||||||||| ||| ||
Sbjct: 3102983 tgagcagggtgtacgcggccccgccgg-agg-agaggaagaagcgcatctacagcacggc 3102926

                                    
Query: 61      gccctccaagttcaccaccat 81
               ||||||||| |||||||||||
Sbjct: 3102925 gccctccaaattcaccaccat 3102905
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>gb|AC099401.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1134F05,
             complete sequence
          Length = 101799

 Score =  212 bits (107), Expect = 6e-52
 Identities = 173/195 (88%)
 Strand = Plus / Minus

                                                                         
Query: 91    tagcgggctggggttcaggcttgtgaggatggggttcgaggacatgtacctgggcagccc 150
             ||||||||||||||||||| | ||||||||||||| |||||||||||||||| |||||||
Sbjct: 25419 tagcgggctggggttcagggtggtgaggatggggtacgaggacatgtacctgtgcagccc 25360

                                                                         
Query: 151   aggaggaatgtacgacaagttcggcaacgactacttcctctgcaccgggccggcgtccat 210
              || |  ||||||   ||||||||||| ||||||||||| ||||||||| ||||||||||
Sbjct: 25359 gggggagatgtacaggaagttcggcaaggactacttcctgtgcaccgggacggcgtccat 25300

                                                                         
Query: 211   cctcgtgcccgtcgtcgtcggccccggcgaggagtggaggggggcgcaggtcatcgagca 270
              || ||||| || ||||||  |||||||||||||||||||| ||||||||||||||||||
Sbjct: 25299 gctggtgccggtggtcgtcaaccccggcgaggagtggagggcggcgcaggtcatcgagca 25240

                            
Query: 271   cgacaacttgtaact 285
             ||||||| |||||||
Sbjct: 25239 cgacaacctgtaact 25225



 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 75/81 (92%), Gaps = 2/81 (2%)
 Strand = Plus / Minus

                                                                         
Query: 1     tgagcagggtgtacgcggcgccgccggnaggnagaggaagaagcgcatctacaacaccgc 60
             ||||||||||||||||||| ||||||| ||| ||||||||||||||||||||| ||| ||
Sbjct: 25996 tgagcagggtgtacgcggccccgccgg-agg-agaggaagaagcgcatctacagcacggc 25939

                                  
Query: 61    gccctccaagttcaccaccat 81
             ||||||||| |||||||||||
Sbjct: 25938 gccctccaaattcaccaccat 25918
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score =  212 bits (107), Expect = 6e-52
 Identities = 173/195 (88%)
 Strand = Plus / Minus

                                                                           
Query: 91      tagcgggctggggttcaggcttgtgaggatggggttcgaggacatgtacctgggcagccc 150
               ||||||||||||||||||| | ||||||||||||| |||||||||||||||| |||||||
Sbjct: 3102517 tagcgggctggggttcagggtggtgaggatggggtacgaggacatgtacctgtgcagccc 3102458

                                                                           
Query: 151     aggaggaatgtacgacaagttcggcaacgactacttcctctgcaccgggccggcgtccat 210
                || |  ||||||   ||||||||||| ||||||||||| ||||||||| ||||||||||
Sbjct: 3102457 gggggagatgtacaggaagttcggcaaggactacttcctgtgcaccgggacggcgtccat 3102398

                                                                           
Query: 211     cctcgtgcccgtcgtcgtcggccccggcgaggagtggaggggggcgcaggtcatcgagca 270
                || ||||| || ||||||  |||||||||||||||||||| ||||||||||||||||||
Sbjct: 3102397 gctggtgccggtggtcgtcaaccccggcgaggagtggagggcggcgcaggtcatcgagca 3102338

                              
Query: 271     cgacaacttgtaact 285
               ||||||| |||||||
Sbjct: 3102337 cgacaacctgtaact 3102323



 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 75/81 (92%), Gaps = 2/81 (2%)
 Strand = Plus / Minus

                                                                           
Query: 1       tgagcagggtgtacgcggcgccgccggnaggnagaggaagaagcgcatctacaacaccgc 60
               ||||||||||||||||||| ||||||| ||| ||||||||||||||||||||| ||| ||
Sbjct: 3103094 tgagcagggtgtacgcggccccgccgg-agg-agaggaagaagcgcatctacagcacggc 3103037

                                    
Query: 61      gccctccaagttcaccaccat 81
               ||||||||| |||||||||||
Sbjct: 3103036 gccctccaaattcaccaccat 3103016
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>emb|CT009545.5| M.truncatula DNA sequence from clone MTH2-107B14 on chromosome 3,
             complete sequence
          Length = 96467

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 310   ttgcacgagaaatcatgttca 330
             |||||||||||||||||||||
Sbjct: 53233 ttgcacgagaaatcatgttca 53253
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>gb|AC137744.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
            OSJNBa0074L11, complete sequence
          Length = 180703

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 347  atgaatcttgtaaccacccat 367
            |||||||||||||||||||||
Sbjct: 6602 atgaatcttgtaaccacccat 6582
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 347      atgaatcttgtaaccacccat 367
                |||||||||||||||||||||
Sbjct: 21654549 atgaatcttgtaaccacccat 21654529
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>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome
          Length = 2595221

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 220     cgtcgtcgtcggccccggcga 240
               |||||||||||||||||||||
Sbjct: 1435696 cgtcgtcgtcggccccggcga 1435716
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 347      atgaatcttgtaaccacccat 367
                |||||||||||||||||||||
Sbjct: 21964748 atgaatcttgtaaccacccat 21964728
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>ref|XM_468503.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2037

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 220 cgtcgtcgtcggccccggcg 239
           ||||||||||||||||||||
Sbjct: 232 cgtcgtcgtcggccccggcg 213
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>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome
          Length = 4403837

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 214     cgtgcccgtcgtcgtcggcc 233
               ||||||||||||||||||||
Sbjct: 4220951 cgtgcccgtcgtcgtcggcc 4220932
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>emb|X61927.1|PCPPC1 P.cepacia plasmid PPC1 DNA
          Length = 1641

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 253 ggcgcaggtcatcgagcacg 272
           ||||||||||||||||||||
Sbjct: 272 ggcgcaggtcatcgagcacg 291
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>emb|BX842584.1| Mycobacterium tuberculosis H37Rv complete genome; segment 13/13
          Length = 244800

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 214   cgtgcccgtcgtcgtcggcc 233
             ||||||||||||||||||||
Sbjct: 61906 cgtgcccgtcgtcgtcggcc 61887
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>emb|BX248347.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment
             14/14
          Length = 278492

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 214   cgtgcccgtcgtcgtcggcc 233
             ||||||||||||||||||||
Sbjct: 97933 cgtgcccgtcgtcgtcggcc 97914
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>gb|AC008577.7| Homo sapiens chromosome 5 clone CTC-558D17, complete sequence
          Length = 77686

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 112   tgtgaggatggggttcgagg 131
             ||||||||||||||||||||
Sbjct: 40370 tgtgaggatggggttcgagg 40351
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>gb|AC011208.5|AC011208 Homo sapiens chromosome 18, clone RP11-131K21, complete sequence
          Length = 181602

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 93    gcgggctggggttcaggctt 112
             ||||||||||||||||||||
Sbjct: 89185 gcgggctggggttcaggctt 89204
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
               sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 178     cgactacttcctctgcaccg 197
               ||||||||||||||||||||
Sbjct: 4200807 cgactacttcctctgcaccg 4200788
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 220      cgtcgtcgtcggccccggcg 239
                ||||||||||||||||||||
Sbjct: 35572592 cgtcgtcgtcggccccggcg 35572573
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 8      ggtgtacgcggcgccgccgg 27
              ||||||||||||||||||||
Sbjct: 316870 ggtgtacgcggcgccgccgg 316851
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>dbj|AP004776.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0452F04
          Length = 171421

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 220   cgtcgtcgtcggccccggcg 239
             ||||||||||||||||||||
Sbjct: 88984 cgtcgtcgtcggccccggcg 88965
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>gb|AE004994.1| Halobacterium sp. NRC-1 section 25 of 170 of the complete genome
          Length = 15274

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 225  tcgtcggccccggcgaggag 244
            ||||||||||||||||||||
Sbjct: 7341 tcgtcggccccggcgaggag 7360
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>ref|XM_561331.1| Anopheles gambiae str. PEST ENSANGP00000025558
           (ENSANGG00000023121), partial mRNA
          Length = 1167

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 259 ggtcatcgagcacgacaact 278
           ||||||||||||||||||||
Sbjct: 642 ggtcatcgagcacgacaact 661
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>dbj|AK069159.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023007N07, full
           insert sequence
          Length = 2037

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 220 cgtcgtcgtcggccccggcg 239
           ||||||||||||||||||||
Sbjct: 232 cgtcgtcgtcggccccggcg 213
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>gb|AY859695.1| Mycobacterium conceptionae CIP 108544 RNA polymerase subunit B (rpoB)
            gene, complete cds
          Length = 3934

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 4    gcagggtgtacgcggcgccg 23
            ||||||||||||||||||||
Sbjct: 3444 gcagggtgtacgcggcgccg 3425
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>emb|AL606654.3|OSJN00100 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0028M18,
             complete sequence
          Length = 132854

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 178   cgactacttcctctgcaccg 197
             ||||||||||||||||||||
Sbjct: 43871 cgactacttcctctgcaccg 43852
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>gb|AD000012.1|MSGY126 Mycobacterium tuberculosis sequence from clone y126
          Length = 37164

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 214   cgtgcccgtcgtcgtcggcc 233
             ||||||||||||||||||||
Sbjct: 15287 cgtgcccgtcgtcgtcggcc 15268
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>dbj|AP004482.1| Lotus japonicus genomic DNA, chromosome 6, clone:LjT17C05, TM0014,
             complete sequence
          Length = 129532

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 322   tcatgttcattctcaaacat 341
             ||||||||||||||||||||
Sbjct: 51262 tcatgttcattctcaaacat 51243


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,788,245
Number of Sequences: 3902068
Number of extensions: 2788245
Number of successful extensions: 65417
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 64924
Number of HSP's gapped (non-prelim): 483
length of query: 391
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 369
effective length of database: 17,147,199,772
effective search space: 6327316715868
effective search space used: 6327316715868
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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