ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal25h16
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1YDC9_SCHPO (Q10172) Hypothetical protein C25G10.09c in chromosome I 30 2.2
2PROP1_CEBAP (Q3LU40) Homeobox protein prophet of Pit-1 (PROP-1) ... 29 4.8
3CD38_MACFA (Q5VAN0) ADP-ribosyl cyclase 1 (EC 3.2.2.5) (Cyclic A... 29 6.3
4NAPH_ECOLI (P33934) Ferredoxin-type protein napH 29 6.3
5CD38_HUMAN (P28907) ADP-ribosyl cyclase 1 (EC 3.2.2.5) (Cyclic A... 29 6.3
6FOG1_HUMAN (Q8IX07) Zinc finger protein ZFPM1 (Zinc finger prote... 28 8.2
7NHRF2_RAT (Q920G2) Na(+)/H(+) exchange regulatory cofactor NHE-R... 28 8.2
8MOT3_RAT (O70461) Monocarboxylate transporter 3 (MCT 3) 28 8.2
9INSM1_MOUSE (Q63ZV0) Insulinoma-associated protein 1 (Zinc finge... 28 8.2

>YDC9_SCHPO (Q10172) Hypothetical protein C25G10.09c in chromosome I|
          Length = 1794

 Score = 30.4 bits (67), Expect = 2.2
 Identities = 15/44 (34%), Positives = 22/44 (50%)
 Frame = -3

Query: 367  MPMIVRGNP*VSIRADHSEPGRRLKYAPNPYDKREPPIPSPITP 236
            + M   G P +++ A  S P        NP+ K +PP PSP+ P
Sbjct: 1602 LAMNAAGQPSLAVPAVPSAPSNHF----NPFAKMQPPAPSPLQP 1641



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>PROP1_CEBAP (Q3LU40) Homeobox protein prophet of Pit-1 (PROP-1)|
           (Pituitary-specific homeodomain factor)
          Length = 226

 Score = 29.3 bits (64), Expect = 4.8
 Identities = 15/37 (40%), Positives = 18/37 (48%)
 Frame = +2

Query: 29  PGSCCAPGAILLPPPGEKCFPYAMPYESHRCAGPSCG 139
           PGS   P +   PPP   CFP+  PY     + PS G
Sbjct: 148 PGSPAGPYSYTTPPPPVTCFPH--PYSHDFPSQPSTG 182



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>CD38_MACFA (Q5VAN0) ADP-ribosyl cyclase 1 (EC 3.2.2.5) (Cyclic ADP-ribose|
           hydrolase 1) (cADPr hydrolase 1) (CD38 homolog)
          Length = 301

 Score = 28.9 bits (63), Expect = 6.3
 Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 4/41 (9%)
 Frame = +3

Query: 315 EWSALMLTYGFPLTIIGMALKYAELKP----VPCITYSDAF 425
           +WS    T  FP T++   +KY E+ P    V C +  DAF
Sbjct: 50  QWSGSGTTSRFPETVLARCVKYTEVHPEMRHVDCQSVWDAF 90



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>NAPH_ECOLI (P33934) Ferredoxin-type protein napH|
          Length = 287

 Score = 28.9 bits (63), Expect = 6.3
 Identities = 13/29 (44%), Positives = 16/29 (55%), Gaps = 4/29 (13%)
 Frame = +2

Query: 245 WTRDRWLPL----VVWIWGVFQSSPWFGV 319
           W   RWL L      ++ G+F S PWFGV
Sbjct: 19  WRSHRWLVLRRLCQFFVLGMFLSGPWFGV 47



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>CD38_HUMAN (P28907) ADP-ribosyl cyclase 1 (EC 3.2.2.5) (Cyclic ADP-ribose|
           hydrolase 1) (cADPr hydrolase 1) (Lymphocyte
           differentiation antigen CD38) (T10) (Acute lymphoblastic
           leukemia cells antigen CD38)
          Length = 300

 Score = 28.9 bits (63), Expect = 6.3
 Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 4/41 (9%)
 Frame = +3

Query: 315 EWSALMLTYGFPLTIIGMALKYAELKP----VPCITYSDAF 425
           +WS    T  FP T++   +KY E+ P    V C +  DAF
Sbjct: 49  QWSGPGTTKRFPETVLARCVKYTEIHPEMRHVDCQSVWDAF 89



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>FOG1_HUMAN (Q8IX07) Zinc finger protein ZFPM1 (Zinc finger protein multitype|
           1) (Friend of GATA protein 1) (Friend of GATA-1) (FOG-1)
          Length = 1004

 Score = 28.5 bits (62), Expect = 8.2
 Identities = 14/34 (41%), Positives = 14/34 (41%)
 Frame = -3

Query: 319 HSEPGRRLKYAPNPYDKREPPIPSPITPKDTLAR 218
           H  P RR    P P     PP PSP  P  T  R
Sbjct: 708 HDPPPRRPAAPPGPPGPAAPPAPSPAAPVRTRRR 741



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>NHRF2_RAT (Q920G2) Na(+)/H(+) exchange regulatory cofactor NHE-RF2 (NHERF-2)|
           (Tyrosine kinase activator protein 1) (TKA-1)
           (SRY-interacting protein 1) (SIP-1) (Solute carrier
           family 9 isoform A3 regulatory factor 2) (NHE3 kinase A
           regulatory protein E3KA
          Length = 337

 Score = 28.5 bits (62), Expect = 8.2
 Identities = 14/34 (41%), Positives = 21/34 (61%)
 Frame = -3

Query: 304 RRLKYAPNPYDKREPPIPSPITPKDTLARVNSSS 203
           +RL+  P   D  E P+PSP+T   +LA++N  S
Sbjct: 237 KRLRVVPTE-DHVEGPLPSPVTNGTSLAQLNGGS 269



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>MOT3_RAT (O70461) Monocarboxylate transporter 3 (MCT 3)|
          Length = 492

 Score = 28.5 bits (62), Expect = 8.2
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = +2

Query: 38  CCAPGAILLPPPGEKCFPYAMP 103
           CCA GA++ PPPG +  P   P
Sbjct: 187 CCACGAVMRPPPGPQPRPDPAP 208



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>INSM1_MOUSE (Q63ZV0) Insulinoma-associated protein 1 (Zinc finger protein IA-1)|
          Length = 521

 Score = 28.5 bits (62), Expect = 8.2
 Identities = 12/34 (35%), Positives = 15/34 (44%)
 Frame = +2

Query: 14  HCKLTPGSCCAPGAILLPPPGEKCFPYAMPYESH 115
           H  L     CAPG    PPPG +   +  P  +H
Sbjct: 64  HAALAAALACAPGPPPPPPPGPRAAHFGNPEAAH 97


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 62,302,433
Number of Sequences: 219361
Number of extensions: 1192217
Number of successful extensions: 4549
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 4353
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4543
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2793557952
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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