ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal25g19
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1NPT1_HUMAN (Q14916) Renal sodium-dependent phosphate transport p... 30 1.5
2NPT1_RABIT (Q28722) Renal sodium-dependent phosphate transport p... 30 1.9
3LX15B_MOUSE (O35936) Arachidonate 15-lipoxygenase type II (EC 1.... 29 2.5
4EXON_EBV (P03217) Alkaline exonuclease (EC 3.1.11.-) 28 5.7
5MYPR_ONCMY (P79826) Myelin proteolipid protein (PLP) (Lipophilin... 27 9.7

>NPT1_HUMAN (Q14916) Renal sodium-dependent phosphate transport protein 1|
           (Sodium/phosphate cotransporter 1) (Na(+)/PI
           cotransporter 1) (Renal sodium-phosphate transport
           protein 1) (Renal Na(+)-dependent phosphate
           cotransporter 1) (Solute carrier family 1
          Length = 465

 Score = 30.0 bits (66), Expect = 1.5
 Identities = 13/35 (37%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
 Frame = +3

Query: 129 YCILLPSSTLAATLPYPAVFLICLAAGCXIC--WF 227
           + +LL +  +  +L +P VF I  A GC +C  WF
Sbjct: 181 FIVLLVTGVICESLGWPMVFYIFGACGCAVCLLWF 215



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>NPT1_RABIT (Q28722) Renal sodium-dependent phosphate transport protein 1|
           (Sodium/phosphate cotransporter 1) (Na(+)/PI
           cotransporter 1) (Renal sodium-phosphate transport
           protein 1) (Renal Na(+)-dependent phosphate
           cotransporter 1) (Solute carrier family 1
          Length = 465

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 13/35 (37%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
 Frame = +3

Query: 129 YCILLPSSTLAATLPYPAVFLICLAAGCXIC--WF 227
           + +LL +  +  +L +P VF I  A GC +C  WF
Sbjct: 181 FIVLLVTGIICESLGWPMVFYIFGACGCAVCLLWF 215



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>LX15B_MOUSE (O35936) Arachidonate 15-lipoxygenase type II (EC 1.13.11.33)|
           (15-LOX-2) (8S-lipoxygenase) (8S-LOX)
          Length = 677

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 15/47 (31%), Positives = 23/47 (48%), Gaps = 7/47 (14%)
 Frame = +2

Query: 197 PGSRVQX-------LLVQHGLLRGLHTQLLRSQPPPGPLPFHKLQRA 316
           PG+ +Q         LV HG+L G+HT +L  +P     P   L ++
Sbjct: 275 PGTSLQAELEKGSLFLVDHGILSGVHTNILNGKPQFSAAPMTLLHQS 321



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>EXON_EBV (P03217) Alkaline exonuclease (EC 3.1.11.-)|
          Length = 470

 Score = 28.1 bits (61), Expect = 5.7
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = +1

Query: 226 STRSASWSAYAASPQSTAPW 285
           ST + SW AYA +   TAPW
Sbjct: 438 STAAGSWKAYADNTFDTAPW 457



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>MYPR_ONCMY (P79826) Myelin proteolipid protein (PLP) (Lipophilin) (DM20)|
          Length = 258

 Score = 27.3 bits (59), Expect = 9.7
 Identities = 15/44 (34%), Positives = 20/44 (45%)
 Frame = +3

Query: 189 LICLAAGCXICWFNTVCFVVCIRSFSAVNRPLALSLSISFNGLS 320
           L+C A GC  C         CIR   AV  P  +S  + F G++
Sbjct: 8   LLCKALGCYDC---------CIRCLGAVPYPSLVSTLLCFTGMA 42


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.316    0.121    0.411 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 29,271,636
Number of Sequences: 219361
Number of extensions: 425098
Number of successful extensions: 1898
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1827
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1888
length of database: 80,573,946
effective HSP length: 88
effective length of database: 61,270,178
effective search space used: 1470484272
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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