| Clone Name | baal25e08 |
|---|---|
| Clone Library Name | barley_pub |
>UL53_HCMVA (P16794) Protein UL53 (HFRF2 protein)| Length = 376 Score = 29.6 bits (65), Expect = 1.9 Identities = 13/27 (48%), Positives = 16/27 (59%) Frame = +2 Query: 119 GCPPSARSSSHQPHACPPSSALEWNPY 199 GC PS+ S S PH PPS A + + Y Sbjct: 321 GCGPSSSSQSTPPHLHPPSQATQPHHY 347
>PTPRG_MOUSE (Q05909) Receptor-type tyrosine-protein phosphatase gamma precursor| (EC 3.1.3.48) (Protein-tyrosine phosphatase gamma) (R-PTP-gamma) Length = 1442 Score = 28.5 bits (62), Expect = 4.2 Identities = 14/26 (53%), Positives = 16/26 (61%) Frame = -2 Query: 339 HPVRGRRAPAKFQILFYN*VPDRPDA 262 H V GRR P + QI FYN PD D+ Sbjct: 163 HSVNGRRFPVEMQIFFYN--PDDFDS 186
>PTPRG_HUMAN (P23470) Receptor-type tyrosine-protein phosphatase gamma precursor| (EC 3.1.3.48) (Protein-tyrosine phosphatase gamma) (R-PTP-gamma) Length = 1445 Score = 28.1 bits (61), Expect = 5.5 Identities = 13/26 (50%), Positives = 16/26 (61%) Frame = -2 Query: 339 HPVRGRRAPAKFQILFYN*VPDRPDA 262 H + GRR P + QI FYN PD D+ Sbjct: 163 HSINGRRFPVEMQIFFYN--PDDFDS 186
>C12A5_DROME (Q9VE01) Probable cytochrome P450 12a5, mitochondrial precursor (EC| 1.14.-.-) (CYPXIIA5) Length = 536 Score = 28.1 bits (61), Expect = 5.5 Identities = 12/29 (41%), Positives = 16/29 (55%) Frame = +2 Query: 137 RSSSHQPHACPPSSALEWNPYVFLPMGNG 223 R++S CP + NP+VFLP G G Sbjct: 450 RNASDSAGKCPANDLKTKNPFVFLPFGFG 478
>C12A4_DROME (Q9VE00) Probable cytochrome P450 12a4, mitochondrial precursor (EC| 1.14.-.-) (CYPXIIA4) Length = 536 Score = 28.1 bits (61), Expect = 5.5 Identities = 12/29 (41%), Positives = 14/29 (48%) Frame = +2 Query: 137 RSSSHQPHACPPSSALEWNPYVFLPMGNG 223 RS CP + NP+VFLP G G Sbjct: 450 RSPKDSESKCPANELKSTNPFVFLPFGFG 478
>CAC1G_RAT (O54898) Voltage-dependent T-type calcium channel alpha-1G subunit| (Voltage-gated calcium channel alpha subunit Cav3.1) Length = 2254 Score = 27.3 bits (59), Expect = 9.4 Identities = 11/18 (61%), Positives = 12/18 (66%) Frame = +2 Query: 122 CPPSARSSSHQPHACPPS 175 CPPSARSS H P + S Sbjct: 1064 CPPSARSSPHSPWSAASS 1081
>DLX5_RAT (P50575) Homeobox protein DLX-5 (DLX-3) (RDLX)| Length = 289 Score = 27.3 bits (59), Expect = 9.4 Identities = 11/16 (68%), Positives = 13/16 (81%) Frame = +2 Query: 131 SARSSSHQPHACPPSS 178 S+RS SH PHA PP+S Sbjct: 229 SSRSLSHHPHAHPPTS 244
>DLX5_MOUSE (P70396) Homeobox protein DLX-5| Length = 289 Score = 27.3 bits (59), Expect = 9.4 Identities = 11/16 (68%), Positives = 13/16 (81%) Frame = +2 Query: 131 SARSSSHQPHACPPSS 178 S+RS SH PHA PP+S Sbjct: 229 SSRSLSHHPHAHPPTS 244
>DLX5_HUMAN (P56178) Homeobox protein DLX-5| Length = 289 Score = 27.3 bits (59), Expect = 9.4 Identities = 11/16 (68%), Positives = 13/16 (81%) Frame = +2 Query: 131 SARSSSHQPHACPPSS 178 S+RS SH PHA PP+S Sbjct: 229 SSRSLSHHPHAHPPTS 244 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 42,941,926 Number of Sequences: 219361 Number of extensions: 781541 Number of successful extensions: 2262 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 2182 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2259 length of database: 80,573,946 effective HSP length: 94 effective length of database: 59,954,012 effective search space used: 1438896288 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)