| Clone Name | baal24o22 |
|---|---|
| Clone Library Name | barley_pub |
>emb|AJ833645.1| Oryza sativa (indica cultivar-group) mRNA for peptidyl prolyl cis-trans isomerase (ppiase gene) Length = 561 Score = 456 bits (230), Expect = e-125 Identities = 361/405 (89%) Strand = Plus / Plus Query: 111 agatttaacaggggatggaggcgtccttaagacggtggttagaaaagcaaaggatgatgc 170 ||||||||| ||||||||||| || |||||||||||||| |||||||||||||||||||| Sbjct: 15 agatttaactggggatggaggtgttcttaagacggtggtcagaaaagcaaaggatgatgc 74 Query: 171 tataagcccatctgacagccttccattagttgatgttcattatgaagggacacttgctga 230 |||| ||| |||| || ||||| || |||||||||||||||||||| ||||| ||||| Sbjct: 75 tatagctccaactgatagtcttcccttggttgatgttcattatgaaggcacactcgctga 134 Query: 231 aaatggggaagtttttgacaccacacatgaagacaattctattttttcatttgaagttgg 290 |||||| |||||||| |||||||| ||||||||||| |||||||| ||||||||| |||| Sbjct: 135 aaatggtgaagttttcgacaccactcatgaagacaactctattttctcatttgaaattgg 194 Query: 291 ccagggagctgtcattaaagcatgggatctagccttaagaactatgaaagttggtgaggt 350 || |||||||||||||||||||||||| |||| |||||||||||||| |||||||| || Sbjct: 195 gcaaggagctgtcattaaagcatgggatatagctttaagaactatgaaggttggtgaagt 254 Query: 351 tgcaaaaataacatgcaagccagaatatgcctatggaagtgcaggctccccaccagagat 410 ||||||||||||||||||||||||||| || || ||||||||||| || || |||||||| Sbjct: 255 tgcaaaaataacatgcaagccagaatacgcatacggaagtgcagggtcgccgccagagat 314 Query: 411 accagcgaatgcgacactcatttttgaggtggaattagtggcgtgcaagccaaggaaagg 470 ||| | ||||| |||||||||||||||||||| |||||||| || | ||| |||||||| Sbjct: 315 tccacccaatgcaacactcatttttgaggtggagttagtggcttgtaggcctaggaaagg 374 Query: 471 ttcaagtctgggcagtgtatctgatgagaaagccangctagagga 515 |||||| ||||||||||| |||||||||||||||| ||||||||| Sbjct: 375 ttcaagcctgggcagtgtttctgatgagaaagccaggctagagga 419
>emb|AJ557547.1|OSA557547 Oryza sativa (indica cultivar-group) mRNA for peptidylprolyl cis-trans isomerase (ppiase gene) Length = 471 Score = 456 bits (230), Expect = e-125 Identities = 361/405 (89%) Strand = Plus / Plus Query: 111 agatttaacaggggatggaggcgtccttaagacggtggttagaaaagcaaaggatgatgc 170 ||||||||| ||||||||||| || |||||||||||||| |||||||||||||||||||| Sbjct: 15 agatttaactggggatggaggtgttcttaagacggtggtcagaaaagcaaaggatgatgc 74 Query: 171 tataagcccatctgacagccttccattagttgatgttcattatgaagggacacttgctga 230 |||| ||| |||| || ||||| || |||||||||||||||||||| ||||| ||||| Sbjct: 75 tatagctccaactgatagtcttcccttggttgatgttcattatgaaggcacactcgctga 134 Query: 231 aaatggggaagtttttgacaccacacatgaagacaattctattttttcatttgaagttgg 290 |||||| |||||||| |||||||| ||||||||||| |||||||| ||||||||| |||| Sbjct: 135 aaatggtgaagttttcgacaccactcatgaagacaactctattttctcatttgaaattgg 194 Query: 291 ccagggagctgtcattaaagcatgggatctagccttaagaactatgaaagttggtgaggt 350 || |||||||||||||||||||||||| |||| |||||||||||||| |||||||| || Sbjct: 195 gcaaggagctgtcattaaagcatgggatatagctttaagaactatgaaggttggtgaagt 254 Query: 351 tgcaaaaataacatgcaagccagaatatgcctatggaagtgcaggctccccaccagagat 410 ||||||||||||||||||||||||||| || || ||||||||||| || || |||||||| Sbjct: 255 tgcaaaaataacatgcaagccagaatacgcatacggaagtgcagggtcgccgccagagat 314 Query: 411 accagcgaatgcgacactcatttttgaggtggaattagtggcgtgcaagccaaggaaagg 470 ||| | ||||| |||||||||||||||||||| |||||||| || | ||| |||||||| Sbjct: 315 tccacccaatgcaacactcatttttgaggtggagttagtggcttgtaggcctaggaaagg 374 Query: 471 ttcaagtctgggcagtgtatctgatgagaaagccangctagagga 515 |||||| ||||||||||| |||||||||||||||| ||||||||| Sbjct: 375 ttcaagcctgggcagtgtttctgatgagaaagccaggctagagga 419
>dbj|AK061127.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-207-H01, full insert sequence Length = 981 Score = 456 bits (230), Expect = e-125 Identities = 361/405 (89%) Strand = Plus / Plus Query: 111 agatttaacaggggatggaggcgtccttaagacggtggttagaaaagcaaaggatgatgc 170 ||||||||| ||||||||||| || |||||||||||||| |||||||||||||||||||| Sbjct: 219 agatttaactggggatggaggtgttcttaagacggtggtcagaaaagcaaaggatgatgc 278 Query: 171 tataagcccatctgacagccttccattagttgatgttcattatgaagggacacttgctga 230 |||| ||| |||| || ||||| || |||||||||||||||||||| ||||| ||||| Sbjct: 279 tatagctccaactgatagtcttcccttggttgatgttcattatgaaggcacactcgctga 338 Query: 231 aaatggggaagtttttgacaccacacatgaagacaattctattttttcatttgaagttgg 290 |||||| |||||||| |||||||| ||||||||||| |||||||| ||||||||| |||| Sbjct: 339 aaatggtgaagttttcgacaccactcatgaagacaactctattttctcatttgaaattgg 398 Query: 291 ccagggagctgtcattaaagcatgggatctagccttaagaactatgaaagttggtgaggt 350 || |||||||||||||||||||||||| |||| |||||||||||||| |||||||| || Sbjct: 399 gcaaggagctgtcattaaagcatgggatatagctttaagaactatgaaggttggtgaagt 458 Query: 351 tgcaaaaataacatgcaagccagaatatgcctatggaagtgcaggctccccaccagagat 410 ||||||||||||||||||||||||||| || || ||||||||||| || || |||||||| Sbjct: 459 tgcaaaaataacatgcaagccagaatacgcatacggaagtgcagggtcgccgccagagat 518 Query: 411 accagcgaatgcgacactcatttttgaggtggaattagtggcgtgcaagccaaggaaagg 470 ||| | ||||| |||||||||||||||||||| |||||||| || | ||| |||||||| Sbjct: 519 tccacccaatgcaacactcatttttgaggtggagttagtggcttgtaggcctaggaaagg 578 Query: 471 ttcaagtctgggcagtgtatctgatgagaaagccangctagagga 515 |||||| ||||||||||| |||||||||||||||| ||||||||| Sbjct: 579 ttcaagcctgggcagtgtttctgatgagaaagccaggctagagga 623
>dbj|AK059467.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-028-D09, full insert sequence Length = 671 Score = 456 bits (230), Expect = e-125 Identities = 361/405 (89%) Strand = Plus / Plus Query: 111 agatttaacaggggatggaggcgtccttaagacggtggttagaaaagcaaaggatgatgc 170 ||||||||| ||||||||||| || |||||||||||||| |||||||||||||||||||| Sbjct: 227 agatttaactggggatggaggtgttcttaagacggtggtcagaaaagcaaaggatgatgc 286 Query: 171 tataagcccatctgacagccttccattagttgatgttcattatgaagggacacttgctga 230 |||| ||| |||| || ||||| || |||||||||||||||||||| ||||| ||||| Sbjct: 287 tatagctccaactgatagtcttcccttggttgatgttcattatgaaggcacactcgctga 346 Query: 231 aaatggggaagtttttgacaccacacatgaagacaattctattttttcatttgaagttgg 290 |||||| |||||||| |||||||| ||||||||||| |||||||| ||||||||| |||| Sbjct: 347 aaatggtgaagttttcgacaccactcatgaagacaactctattttctcatttgaaattgg 406 Query: 291 ccagggagctgtcattaaagcatgggatctagccttaagaactatgaaagttggtgaggt 350 || |||||||||||||||||||||||| |||| |||||||||||||| |||||||| || Sbjct: 407 gcaaggagctgtcattaaagcatgggatatagctttaagaactatgaaggttggtgaagt 466 Query: 351 tgcaaaaataacatgcaagccagaatatgcctatggaagtgcaggctccccaccagagat 410 ||||||||||||||||||||||||||| || || ||||||||||| || || |||||||| Sbjct: 467 tgcaaaaataacatgcaagccagaatacgcatacggaagtgcagggtcgccgccagagat 526 Query: 411 accagcgaatgcgacactcatttttgaggtggaattagtggcgtgcaagccaaggaaagg 470 ||| | ||||| |||||||||||||||||||| |||||||| || | ||| |||||||| Sbjct: 527 tccacccaatgcaacactcatttttgaggtggagttagtggcttgtaggcctaggaaagg 586 Query: 471 ttcaagtctgggcagtgtatctgatgagaaagccangctagagga 515 |||||| ||||||||||| |||||||||||||||| ||||||||| Sbjct: 587 ttcaagcctgggcagtgtttctgatgagaaagccaggctagagga 631
>dbj|AK101652.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033057B20, full insert sequence Length = 1011 Score = 448 bits (226), Expect = e-123 Identities = 360/405 (88%) Strand = Plus / Plus Query: 111 agatttaacaggggatggaggcgtccttaagacggtggttagaaaagcaaaggatgatgc 170 ||||||||| ||||||||||| || |||||||||||||| |||||||||||||||||||| Sbjct: 241 agatttaactggggatggaggtgttcttaagacggtggtcagaaaagcaaaggatgatgc 300 Query: 171 tataagcccatctgacagccttccattagttgatgttcattatgaagggacacttgctga 230 |||| ||| |||| || ||||| || |||||||||||||||||||| ||||| ||||| Sbjct: 301 tatagctccaactgatagtcttcccttggttgatgttcattatgaaggcacactcgctga 360 Query: 231 aaatggggaagtttttgacaccacacatgaagacaattctattttttcatttgaagttgg 290 |||||| |||||||| |||||||| ||||||||||| |||||||| ||||||||| |||| Sbjct: 361 aaatggtgaagttttcgacaccactcatgaagacaactctattttctcatttgaaattgg 420 Query: 291 ccagggagctgtcattaaagcatgggatctagccttaagaactatgaaagttggtgaggt 350 || |||||||||||||||||||||||| |||| |||||||||||||| |||||||| || Sbjct: 421 gcaaggagctgtcattaaagcatgggatatagctttaagaactatgaaggttggtgaagt 480 Query: 351 tgcaaaaataacatgcaagccagaatatgcctatggaagtgcaggctccccaccagagat 410 ||||||||||||||||||||||||||| || || ||||||||||| || || |||||||| Sbjct: 481 tgcaaaaataacatgcaagccagaatacgcatacggaagtgcagggtcgccgccagagat 540 Query: 411 accagcgaatgcgacactcatttttgaggtggaattagtggcgtgcaagccaaggaaagg 470 ||| | ||||| |||||||||||||||||||| |||||||| || | ||| |||||||| Sbjct: 541 tccacccaatgcaacactcatttttgaggtggagttagtggcttgtaggcctaggaaagg 600 Query: 471 ttcaagtctgggcagtgtatctgatgagaaagccangctagagga 515 |||||| |||||| |||| |||||||||||||||| ||||||||| Sbjct: 601 ttcaagcctgggcggtgtttctgatgagaaagccaggctagagga 645
>gb|BT017313.1| Zea mays clone EL01N0318B03.c mRNA sequence Length = 848 Score = 327 bits (165), Expect = 2e-86 Identities = 339/397 (85%) Strand = Plus / Plus Query: 109 atagatttaacaggggatggaggcgtccttaagacggtggttagaaaagcaaaggatgat 168 |||||| |||| ||||||||||| || |||||||| || || | |||||||| |||||| Sbjct: 183 atagatctaacgggggatggaggtgttcttaagacagtagtgcggaaagcaaaagatgat 242 Query: 169 gctataagcccatctgacagccttccattagttgatgttcattatgaagggacacttgct 228 |||||| ||||| || ||||| || || |||||||||||||| ||||| ||||||||| Sbjct: 243 gctatagcgccatccgagagcctgcccttggttgatgttcattacgaaggtacacttgct 302 Query: 229 gaaaatggggaagtttttgacaccacacatgaagacaattctattttttcatttgaagtt 288 || | ||| |||||||| || ||||| |||||||| || |||||||| ||||||||| || Sbjct: 303 gagactggtgaagttttcgataccacccatgaagataactctattttctcatttgaaatt 362 Query: 289 ggccagggagctgtcattaaagcatgggatctagccttaagaactatgaaagttggtgag 348 || || || |||||||| |||||||||||| ||||||||||||||||||| ||||||||| Sbjct: 363 ggacaaggcgctgtcatcaaagcatgggatatagccttaagaactatgaaggttggtgag 422 Query: 349 gttgcaaaaataacatgcaagccagaatatgcctatggaagtgcaggctccccaccagag 408 ||||||||||| |||||||| |||||||||| |||||| ||||||||| ||||||||| Sbjct: 423 gttgcaaaaattacatgcaaatcagaatatgcatatggagctgcaggctcaccaccagag 482 Query: 409 ataccagcgaatgcgacactcatttttgaggtggaattagtggcgtgcaagccaaggaaa 468 ||||| | ||||| || || |||||||||||||| |||| || |||| ||| |||||| Sbjct: 483 atacctcctaatgcaacccttatttttgaggtggagctagtagcttgcaggccgaggaaa 542 Query: 469 ggttcaagtctgggcagtgtatctgatgagaaagcca 505 |||||||| | ||||||||||||||||||||||||| Sbjct: 543 ggttcaagcttaggcagtgtatctgatgagaaagcca 579
>gb|AY105226.1| Zea mays PCO110390 mRNA sequence Length = 967 Score = 327 bits (165), Expect = 2e-86 Identities = 339/397 (85%) Strand = Plus / Plus Query: 109 atagatttaacaggggatggaggcgtccttaagacggtggttagaaaagcaaaggatgat 168 |||||| |||| ||||||||||| || |||||||| || || | |||||||| |||||| Sbjct: 154 atagatctaacgggggatggaggtgttcttaagacagtagtgcggaaagcaaaagatgat 213 Query: 169 gctataagcccatctgacagccttccattagttgatgttcattatgaagggacacttgct 228 |||||| ||||| || ||||| || || |||||||||||||| ||||| ||||||||| Sbjct: 214 gctatagcgccatccgagagcctgcccttggttgatgttcattacgaaggtacacttgct 273 Query: 229 gaaaatggggaagtttttgacaccacacatgaagacaattctattttttcatttgaagtt 288 || | ||| |||||||| || ||||| |||||||| || |||||||| ||||||||| || Sbjct: 274 gagactggtgaagttttcgataccacccatgaagataactctattttctcatttgaaatt 333 Query: 289 ggccagggagctgtcattaaagcatgggatctagccttaagaactatgaaagttggtgag 348 || || || |||||||| |||||||||||| ||||||||||||||||||| ||||| ||| Sbjct: 334 ggacaaggcgctgtcatcaaagcatgggatatagccttaagaactatgaaggttggcgag 393 Query: 349 gttgcaaaaataacatgcaagccagaatatgcctatggaagtgcaggctccccaccagag 408 ||||||||||| ||||||||| |||||||||| |||||| ||||||||| ||||||||| Sbjct: 394 gttgcaaaaattacatgcaagtcagaatatgcatatggagctgcaggctcgccaccagag 453 Query: 409 ataccagcgaatgcgacactcatttttgaggtggaattagtggcgtgcaagccaaggaaa 468 ||||| | ||||| || || |||||||||||||| |||| || |||| ||| |||||| Sbjct: 454 atacctcctaatgcaacccttatttttgaggtggagctagtagcttgcaggccgaggaaa 513 Query: 469 ggttcaagtctgggcagtgtatctgatgagaaagcca 505 |||||||| | ||||||||||||||||||||||||| Sbjct: 514 ggttcaagcttaggcagtgtatctgatgagaaagcca 550
>dbj|AK105246.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-113-H11, full insert sequence Length = 1307 Score = 190 bits (96), Expect = 3e-45 Identities = 332/411 (80%) Strand = Plus / Plus Query: 106 accatagatttaacaggggatggaggcgtccttaagacggtggttagaaaagcaaaggat 165 |||||||||||||| || ||| || || | |||||||| ||| | || | |||||||||| Sbjct: 491 accatagatttaaccggagatagatgcattcttaagacagtgatcaggagagcaaaggat 550 Query: 166 gatgctataagcccatctgacagccttccattagttgatgttcattatgaagggacactt 225 ||||||| || || || || ||||| | ||||||||||| |||||||| |||||| Sbjct: 551 gatgctactgcaccttcagatagtcttcccattgttgatgttcactatgaaggaacactt 610 Query: 226 gctgaaaatggggaagtttttgacaccacacatgaagacaattctattttttcatttgaa 285 ||||| || |||||||| |||||||| || ||||||||||| || | || ||||||||| Sbjct: 611 gctgagaacggggaagtgtttgacactactcatgaagacaactccgtcttctcatttgaa 670 Query: 286 gttggccagggagctgtcattaaagcatgggatctagccttaagaactatgaaagttggt 345 |||| ||||| ||||||| || ||||||||| | ||| | | ||| ||||| ||||| Sbjct: 671 attggagagggaactgtcatcaaggcatgggatatcgccgtgaaaacaatgaaggttgga 730 Query: 346 gaggttgcaaaaataacatgcaagccagaatatgcctatggaagtgcaggctccccacca 405 ||||||||||| || |||||||||||||||||||| |||||| |||||| || || ||| Sbjct: 731 gaggttgcaaagatcacatgcaagccagaatatgcttatggagctgcaggttcacctcca 790 Query: 406 gagataccagcgaatgcgacactcatttttgaggtggaattagtggcgtgcaagccaagg 465 |||||||| | |||| || |||| ||||||||| || ||| | || |||| ||| ||| Sbjct: 791 gagataccgccagatgcaactctcacttttgaggttgagttaatcgcatgcaggccgagg 850 Query: 466 aaaggttcaagtctgggcagtgtatctgatgagaaagccangctagaggag 516 |||||||| ||| ||| ||||||||||| |||||||| | ||| |||||| Sbjct: 851 aaaggttctagtgtggaaagtgtatctgaagagaaagctaggcttgaggag 901
>gb|AC105770.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1362_D02, complete sequence Length = 131860 Score = 170 bits (86), Expect = 3e-39 Identities = 122/134 (91%) Strand = Plus / Minus Query: 205 gttcattatgaagggacacttgctgaaaatggggaagtttttgacaccacacatgaagac 264 |||||||||||||| ||||| ||||||||||| |||||||| |||||||| ||||||||| Sbjct: 50094 gttcattatgaaggcacactcgctgaaaatggtgaagttttcgacaccactcatgaagac 50035 Query: 265 aattctattttttcatttgaagttggccagggagctgtcattaaagcatgggatctagcc 324 || |||||||| ||||||||| |||| || |||||||||||||||||||||||| |||| Sbjct: 50034 aactctattttctcatttgaaattgggcaaggagctgtcattaaagcatgggatatagct 49975 Query: 325 ttaagaactatgaa 338 |||||||||||||| Sbjct: 49974 ttaagaactatgaa 49961 Score = 117 bits (59), Expect = 4e-23 Identities = 82/90 (91%) Strand = Plus / Minus Query: 424 acactcatttttgaggtggaattagtggcgtgcaagccaaggaaaggttcaagtctgggc 483 |||||||||||||||||||| |||||||| || | ||| |||||||||||||| |||||| Sbjct: 49711 acactcatttttgaggtggagttagtggcttgtaggcctaggaaaggttcaagcctgggc 49652 Query: 484 agtgtatctgatgagaaagccangctagag 513 ||||| |||||||||||||||| ||||||| Sbjct: 49651 agtgtttctgatgagaaagccaggctagag 49622 Score = 95.6 bits (48), Expect = 1e-16 Identities = 60/64 (93%) Strand = Plus / Minus Query: 111 agatttaacaggggatggaggcgtccttaagacggtggttagaaaagcaaaggatgatgc 170 ||||||||| ||||||||||| || |||||||||||||| |||||||||||||||||||| Sbjct: 50495 agatttaactggggatggaggtgttcttaagacggtggtcagaaaagcaaaggatgatgc 50436 Query: 171 tata 174 |||| Sbjct: 50435 tata 50432 Score = 87.7 bits (44), Expect = 3e-14 Identities = 68/76 (89%) Strand = Plus / Minus Query: 335 tgaaagttggtgaggttgcaaaaataacatgcaagccagaatatgcctatggaagtgcag 394 |||| |||||||| ||||||||||||||||||||||||||||| || || |||||||||| Sbjct: 49876 tgaaggttggtgaagttgcaaaaataacatgcaagccagaatacgcatacggaagtgcag 49817 Query: 395 gctccccaccagagat 410 | || || |||||||| Sbjct: 49816 ggtcgccgccagagat 49801
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 170 bits (86), Expect = 3e-39 Identities = 122/134 (91%) Strand = Plus / Minus Query: 205 gttcattatgaagggacacttgctgaaaatggggaagtttttgacaccacacatgaagac 264 |||||||||||||| ||||| ||||||||||| |||||||| |||||||| ||||||||| Sbjct: 22348459 gttcattatgaaggcacactcgctgaaaatggtgaagttttcgacaccactcatgaagac 22348400 Query: 265 aattctattttttcatttgaagttggccagggagctgtcattaaagcatgggatctagcc 324 || |||||||| ||||||||| |||| || |||||||||||||||||||||||| |||| Sbjct: 22348399 aactctattttctcatttgaaattgggcaaggagctgtcattaaagcatgggatatagct 22348340 Query: 325 ttaagaactatgaa 338 |||||||||||||| Sbjct: 22348339 ttaagaactatgaa 22348326 Score = 117 bits (59), Expect = 4e-23 Identities = 82/90 (91%) Strand = Plus / Minus Query: 424 acactcatttttgaggtggaattagtggcgtgcaagccaaggaaaggttcaagtctgggc 483 |||||||||||||||||||| |||||||| || | ||| |||||||||||||| |||||| Sbjct: 22348076 acactcatttttgaggtggagttagtggcttgtaggcctaggaaaggttcaagcctgggc 22348017 Query: 484 agtgtatctgatgagaaagccangctagag 513 ||||| |||||||||||||||| ||||||| Sbjct: 22348016 agtgtttctgatgagaaagccaggctagag 22347987 Score = 95.6 bits (48), Expect = 1e-16 Identities = 60/64 (93%) Strand = Plus / Minus Query: 111 agatttaacaggggatggaggcgtccttaagacggtggttagaaaagcaaaggatgatgc 170 ||||||||| ||||||||||| || |||||||||||||| |||||||||||||||||||| Sbjct: 22348860 agatttaactggggatggaggtgttcttaagacggtggtcagaaaagcaaaggatgatgc 22348801 Query: 171 tata 174 |||| Sbjct: 22348800 tata 22348797 Score = 87.7 bits (44), Expect = 3e-14 Identities = 68/76 (89%) Strand = Plus / Minus Query: 335 tgaaagttggtgaggttgcaaaaataacatgcaagccagaatatgcctatggaagtgcag 394 |||| |||||||| ||||||||||||||||||||||||||||| || || |||||||||| Sbjct: 22348241 tgaaggttggtgaagttgcaaaaataacatgcaagccagaatacgcatacggaagtgcag 22348182 Query: 395 gctccccaccagagat 410 | || || |||||||| Sbjct: 22348181 ggtcgccgccagagat 22348166
>ref|NM_190571.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1026 Score = 145 bits (73), Expect = 2e-31 Identities = 175/209 (83%) Strand = Plus / Plus Query: 205 gttcattatgaagggacacttgctgaaaatggggaagtttttgacaccacacatgaagac 264 ||||| |||||||| ||||||||||| || |||||||| |||||||| || ||||||||| Sbjct: 550 gttcactatgaaggaacacttgctgagaacggggaagtgtttgacactactcatgaagac 609 Query: 265 aattctattttttcatttgaagttggccagggagctgtcattaaagcatgggatctagcc 324 || || | || ||||||||| |||| ||||| ||||||| || ||||||||| | ||| Sbjct: 610 aactccgtcttctcatttgaaattggagagggaactgtcatcaaggcatgggatatcgcc 669 Query: 325 ttaagaactatgaaagttggtgaggttgcaaaaataacatgcaagccagaatatgcctat 384 | | ||| ||||| ||||| ||||||||||| || |||||||||||||||||||| ||| Sbjct: 670 gtgaaaacaatgaaggttggagaggttgcaaagatcacatgcaagccagaatatgcttat 729 Query: 385 ggaagtgcaggctccccaccagagatacc 413 ||| |||||| || || ||||||||||| Sbjct: 730 ggagctgcaggttcacctccagagatacc 758 Score = 50.1 bits (25), Expect = 0.007 Identities = 64/77 (83%) Strand = Plus / Plus Query: 427 ctcatttttgaggtggaattagtggcgtgcaagccaaggaaaggttcaagtctgggcagt 486 |||| ||||||||| || ||| | || |||| ||| ||||||||||| ||| ||| ||| Sbjct: 781 ctcacttttgaggttgagttaatcgcatgcaggccgaggaaaggttctagtgtggaaagt 840 Query: 487 gtatctgatgagaaagc 503 |||||||| |||||||| Sbjct: 841 gtatctgaagagaaagc 857 Score = 46.1 bits (23), Expect = 0.11 Identities = 56/67 (83%) Strand = Plus / Plus Query: 106 accatagatttaacaggggatggaggcgtccttaagacggtggttagaaaagcaaaggat 165 |||||||||||||| || ||| || || | |||||||| ||| | || | |||||||||| Sbjct: 355 accatagatttaaccggagatagatgcattcttaagacagtgatcaggagagcaaaggat 414 Query: 166 gatgcta 172 ||||||| Sbjct: 415 gatgcta 421
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 83.8 bits (42), Expect = 5e-13 Identities = 96/114 (84%) Strand = Plus / Plus Query: 205 gttcattatgaagggacacttgctgaaaatggggaagtttttgacaccacacatgaagac 264 ||||| |||||||| ||||||||||| || |||||||| |||||||| || ||||||||| Sbjct: 36249070 gttcactatgaaggaacacttgctgagaacggggaagtgtttgacactactcatgaagac 36249129 Query: 265 aattctattttttcatttgaagttggccagggagctgtcattaaagcatgggat 318 || || | || ||||||||| |||| ||||| ||||||| || ||||||||| Sbjct: 36249130 aactccgtcttctcatttgaaattggagagggaactgtcatcaaggcatgggat 36249183 Score = 75.8 bits (38), Expect = 1e-10 Identities = 65/74 (87%) Strand = Plus / Plus Query: 340 gttggtgaggttgcaaaaataacatgcaagccagaatatgcctatggaagtgcaggctcc 399 ||||| ||||||||||| || |||||||||||||||||||| |||||| |||||| || Sbjct: 36249296 gttggagaggttgcaaagatcacatgcaagccagaatatgcttatggagctgcaggttca 36249355 Query: 400 ccaccagagatacc 413 || ||||||||||| Sbjct: 36249356 cctccagagatacc 36249369 Score = 50.1 bits (25), Expect = 0.007 Identities = 64/77 (83%) Strand = Plus / Plus Query: 427 ctcatttttgaggtggaattagtggcgtgcaagccaaggaaaggttcaagtctgggcagt 486 |||| ||||||||| || ||| | || |||| ||| ||||||||||| ||| ||| ||| Sbjct: 36249481 ctcacttttgaggttgagttaatcgcatgcaggccgaggaaaggttctagtgtggaaagt 36249540 Query: 487 gtatctgatgagaaagc 503 |||||||| |||||||| Sbjct: 36249541 gtatctgaagagaaagc 36249557 Score = 46.1 bits (23), Expect = 0.11 Identities = 56/67 (83%) Strand = Plus / Plus Query: 106 accatagatttaacaggggatggaggcgtccttaagacggtggttagaaaagcaaaggat 165 |||||||||||||| || ||| || || | |||||||| ||| | || | |||||||||| Sbjct: 36248875 accatagatttaaccggagatagatgcattcttaagacagtgatcaggagagcaaaggat 36248934 Query: 166 gatgcta 172 ||||||| Sbjct: 36248935 gatgcta 36248941
>dbj|AP003240.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0406G08 Length = 144233 Score = 83.8 bits (42), Expect = 5e-13 Identities = 96/114 (84%) Strand = Plus / Plus Query: 205 gttcattatgaagggacacttgctgaaaatggggaagtttttgacaccacacatgaagac 264 ||||| |||||||| ||||||||||| || |||||||| |||||||| || ||||||||| Sbjct: 126083 gttcactatgaaggaacacttgctgagaacggggaagtgtttgacactactcatgaagac 126142 Query: 265 aattctattttttcatttgaagttggccagggagctgtcattaaagcatgggat 318 || || | || ||||||||| |||| ||||| ||||||| || ||||||||| Sbjct: 126143 aactccgtcttctcatttgaaattggagagggaactgtcatcaaggcatgggat 126196 Score = 75.8 bits (38), Expect = 1e-10 Identities = 65/74 (87%) Strand = Plus / Plus Query: 340 gttggtgaggttgcaaaaataacatgcaagccagaatatgcctatggaagtgcaggctcc 399 ||||| ||||||||||| || |||||||||||||||||||| |||||| |||||| || Sbjct: 126309 gttggagaggttgcaaagatcacatgcaagccagaatatgcttatggagctgcaggttca 126368 Query: 400 ccaccagagatacc 413 || ||||||||||| Sbjct: 126369 cctccagagatacc 126382 Score = 50.1 bits (25), Expect = 0.007 Identities = 64/77 (83%) Strand = Plus / Plus Query: 427 ctcatttttgaggtggaattagtggcgtgcaagccaaggaaaggttcaagtctgggcagt 486 |||| ||||||||| || ||| | || |||| ||| ||||||||||| ||| ||| ||| Sbjct: 126494 ctcacttttgaggttgagttaatcgcatgcaggccgaggaaaggttctagtgtggaaagt 126553 Query: 487 gtatctgatgagaaagc 503 |||||||| |||||||| Sbjct: 126554 gtatctgaagagaaagc 126570 Score = 46.1 bits (23), Expect = 0.11 Identities = 56/67 (83%) Strand = Plus / Plus Query: 106 accatagatttaacaggggatggaggcgtccttaagacggtggttagaaaagcaaaggat 165 |||||||||||||| || ||| || || | |||||||| ||| | || | |||||||||| Sbjct: 125888 accatagatttaaccggagatagatgcattcttaagacagtgatcaggagagcaaaggat 125947 Query: 166 gatgcta 172 ||||||| Sbjct: 125948 gatgcta 125954
>gb|AC130652.27| Medicago truncatula clone mth1-1k12, complete sequence Length = 105218 Score = 71.9 bits (36), Expect = 2e-09 Identities = 69/80 (86%) Strand = Plus / Plus Query: 211 tatgaagggacacttgctgaaaatggggaagtttttgacaccacacatgaagacaattct 270 |||||||| ||||||||||| | || ||||| |||||||| ||||||||||||||| || Sbjct: 34452 tatgaaggcacacttgctgataccggtgaagtctttgacactacacatgaagacaatact 34511 Query: 271 attttttcatttgaagttgg 290 || || || ||||||||||| Sbjct: 34512 atattctcctttgaagttgg 34531 Score = 65.9 bits (33), Expect = 1e-07 Identities = 36/37 (97%) Strand = Plus / Plus Query: 350 ttgcaaaaataacatgcaagccagaatatgcctatgg 386 ||||||||||||||||||||||||||||||| ||||| Sbjct: 34673 ttgcaaaaataacatgcaagccagaatatgcatatgg 34709
>gb|AC129090.22| Medicago truncatula clone mth2-14i8, complete sequence Length = 163160 Score = 71.9 bits (36), Expect = 2e-09 Identities = 69/80 (86%) Strand = Plus / Plus Query: 211 tatgaagggacacttgctgaaaatggggaagtttttgacaccacacatgaagacaattct 270 |||||||| ||||||||||| | || ||||| |||||||| ||||||||||||||| || Sbjct: 13476 tatgaaggcacacttgctgataccggtgaagtctttgacactacacatgaagacaatact 13535 Query: 271 attttttcatttgaagttgg 290 || || || ||||||||||| Sbjct: 13536 atattctcctttgaagttgg 13555 Score = 65.9 bits (33), Expect = 1e-07 Identities = 36/37 (97%) Strand = Plus / Plus Query: 350 ttgcaaaaataacatgcaagccagaatatgcctatgg 386 ||||||||||||||||||||||||||||||| ||||| Sbjct: 13697 ttgcaaaaataacatgcaagccagaatatgcatatgg 13733
>gb|BT014558.1| Lycopersicon esculentum clone 134011F, mRNA sequence Length = 1042 Score = 61.9 bits (31), Expect = 2e-06 Identities = 160/203 (78%) Strand = Plus / Plus Query: 199 gttgatgttcattatgaagggacacttgctgaaaatggggaagtttttgacaccacacat 258 |||||||||||||||||||| || |||||||| | ||| ||||| ||||| || || | | Sbjct: 244 gttgatgttcattatgaaggcactcttgctgatactggtgaagtatttgatactacccgt 303 Query: 259 gaagacaattctattttttcatttgaagttggccagggagctgtcattaaagcatgggat 318 ||||||||| | ||||| || ||||| | ||| || |||| ||||| || |||||| Sbjct: 304 gaagacaatacaattttctcctttgagataggcactggttctgttattaaggcttgggat 363 Query: 319 ctagccttaagaactatgaaagttggtgaggttgcaaaaataacatgcaagccagaatat 378 | || | || || ||||| |||||||| || || ||| || ||||||||||| ||| Sbjct: 364 gttgcactgaggaccatgaaggttggtgaagtagctgtaattacctgcaagccagagtat 423 Query: 379 gcctatggaagtgcaggctcccc 401 |||||||||||||| || ||||| Sbjct: 424 gcctatggaagtgctgggtcccc 446
>ref|NM_115409.2| Arabidopsis thaliana FK506 binding / peptidyl-prolyl cis-trans isomerase AT3G55520 mRNA, complete cds Length = 966 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 334 atgaaagttggtgaggttgcaaaaataacatgcaagccagaatatgcctatggaag 389 ||||| ||||| || ||||||||||| ||||| |||||||||||||| || ||||| Sbjct: 414 atgaaggttggagaagttgcaaaaattacatgtaagccagaatatgcttacggaag 469
>gb|AY091314.1| Arabidopsis thaliana unknown protein (At3g55520) mRNA, complete cds Length = 604 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 334 atgaaagttggtgaggttgcaaaaataacatgcaagccagaatatgcctatggaag 389 ||||| ||||| || ||||||||||| ||||| |||||||||||||| || ||||| Sbjct: 238 atgaaggttggagaagttgcaaaaattacatgtaagccagaatatgcttacggaag 293
>gb|AY065308.1| Arabidopsis thaliana unknown protein (At3g55520) mRNA, complete cds Length = 866 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 334 atgaaagttggtgaggttgcaaaaataacatgcaagccagaatatgcctatggaag 389 ||||| ||||| || ||||||||||| ||||| |||||||||||||| || ||||| Sbjct: 414 atgaaggttggagaagttgcaaaaattacatgtaagccagaatatgcttacggaag 469
>gb|AY085181.1| Arabidopsis thaliana clone 13620 mRNA, complete sequence Length = 900 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 334 atgaaagttggtgaggttgcaaaaataacatgcaagccagaatatgcctatggaag 389 ||||| ||||| || ||||||||||| ||||| |||||||||||||| || ||||| Sbjct: 406 atgaaggttggagaagttgcaaaaattacatgtaagccagaatatgcttacggaag 461
>emb|AL132975.1|ATT22E16 Arabidopsis thaliana DNA chromosome 3, BAC clone T22E16 Length = 103240 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 340 gttggtgaggttgcaaaaataacatgcaagccagaatatgcctatggaag 389 ||||| || ||||||||||| ||||| |||||||||||||| || ||||| Sbjct: 77097 gttggagaagttgcaaaaattacatgtaagccagaatatgcttacggaag 77146
>gb|AC123060.4| Mus musculus chromosome 6 clone RP23-214M22, complete sequence Length = 210248 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 364 tgcaagccagaatatgcctatgg 386 ||||||||||||||||||||||| Sbjct: 58913 tgcaagccagaatatgcctatgg 58891
>gb|BC003447.1| Mus musculus FK506 binding protein 4, mRNA (cDNA clone MGC:6528 IMAGE:2651490), complete cds Length = 1625 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 364 tgcaagccagaatatgcctatgg 386 ||||||||||||||||||||||| Sbjct: 457 tgcaagccagaatatgcctatgg 479
>emb|X17069.2|MMTRANSP2 Mus musculus partial mRNA for immunophilin FKBP-52 Length = 2051 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 364 tgcaagccagaatatgcctatgg 386 ||||||||||||||||||||||| Sbjct: 306 tgcaagccagaatatgcctatgg 328
>emb|X17068.1|MMTRANS2 Mouse mRNA for protein with homology to transition protein 2 (TP2) Length = 1817 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 364 tgcaagccagaatatgcctatgg 386 ||||||||||||||||||||||| Sbjct: 301 tgcaagccagaatatgcctatgg 323
>emb|X70887.1|MMP59 M.musculus mRNA for p59 immunophilin Length = 2063 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 364 tgcaagccagaatatgcctatgg 386 ||||||||||||||||||||||| Sbjct: 337 tgcaagccagaatatgcctatgg 359
>ref|NM_010219.2| Mus musculus FK506 binding protein 4 (Fkbp4), mRNA Length = 2167 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 364 tgcaagccagaatatgcctatgg 386 ||||||||||||||||||||||| Sbjct: 440 tgcaagccagaatatgcctatgg 462
>dbj|AK160202.1| Mus musculus 10 days embryo whole body cDNA, RIKEN full-length enriched library, clone:2610002F09 product:FK506 binding protein 4, full insert sequence Length = 1558 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 364 tgcaagccagaatatgcctatgg 386 ||||||||||||||||||||||| Sbjct: 389 tgcaagccagaatatgcctatgg 411
>dbj|AK051433.1| Mus musculus 12 days embryo spinal ganglion cDNA, RIKEN full-length enriched library, clone:D130048N01 product:FK506 binding protein 4 (59 kDa), full insert sequence Length = 2855 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 364 tgcaagccagaatatgcctatgg 386 ||||||||||||||||||||||| Sbjct: 466 tgcaagccagaatatgcctatgg 488
>dbj|AK083912.1| Mus musculus 12 days embryo spinal ganglion cDNA, RIKEN full-length enriched library, clone:D130059C21 product:FK506 binding protein 4 (59 kDa), full insert sequence Length = 2167 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 364 tgcaagccagaatatgcctatgg 386 ||||||||||||||||||||||| Sbjct: 440 tgcaagccagaatatgcctatgg 462
>dbj|AK089972.1| Mus musculus RCB-0559 K-1 . F1 cDNA, RIKEN full-length enriched library, clone:G430037B17 product:FK506 binding protein 4 (59 kDa), full insert sequence Length = 2174 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 364 tgcaagccagaatatgcctatgg 386 ||||||||||||||||||||||| Sbjct: 449 tgcaagccagaatatgcctatgg 471
>dbj|AK212190.1| Mus musculus cDNA, clone:Y2G0124C14, strand:plus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000032508, based on BLAT search Length = 398 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 364 tgcaagccagaatatgcctatgg 386 ||||||||||||||||||||||| Sbjct: 294 tgcaagccagaatatgcctatgg 316
>dbj|AK204158.1| Mus musculus cDNA, clone:Y1G0147H16, strand:minus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000032508, based on BLAT search Length = 229 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 364 tgcaagccagaatatgcctatgg 386 ||||||||||||||||||||||| Sbjct: 103 tgcaagccagaatatgcctatgg 125
>dbj|AK202898.1| Mus musculus cDNA, clone:Y1G0143B08, strand:plus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000032508, based on BLAT search Length = 242 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 364 tgcaagccagaatatgcctatgg 386 ||||||||||||||||||||||| Sbjct: 104 tgcaagccagaatatgcctatgg 126
>dbj|AK199911.1| Mus musculus cDNA, clone:Y1G0132M05, strand:plus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000032508, based on BLAT search Length = 230 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 364 tgcaagccagaatatgcctatgg 386 ||||||||||||||||||||||| Sbjct: 104 tgcaagccagaatatgcctatgg 126
>dbj|AK194969.1| Mus musculus cDNA, clone:Y1G0116P15, strand:plus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000032508, based on BLAT search Length = 229 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 364 tgcaagccagaatatgcctatgg 386 ||||||||||||||||||||||| Sbjct: 103 tgcaagccagaatatgcctatgg 125
>dbj|AK189844.1| Mus musculus cDNA, clone:Y0G0150O19, strand:plus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000032508, based on BLAT search Length = 328 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 364 tgcaagccagaatatgcctatgg 386 ||||||||||||||||||||||| Sbjct: 104 tgcaagccagaatatgcctatgg 126
>ref|XM_537428.2| PREDICTED: Canis familiaris similar to FK506-binding protein 3 (Peptidyl-prolyl cis-trans isomerase) (PPIase) (Rotamase) (25 kDa FKBP) (FKBP-25) (Rapamycin-selective 25 kDa immunophilin), transcript variant 1 (LOC480306), mRNA Length = 987 Score = 44.1 bits (22), Expect = 0.45 Identities = 25/26 (96%) Strand = Plus / Plus Query: 426 actcatttttgaggtggaattagtgg 451 |||||||||||| ||||||||||||| Sbjct: 666 actcatttttgaagtggaattagtgg 691
>ref|XM_846048.1| PREDICTED: Canis familiaris similar to FK506-binding protein 3 (Peptidyl-prolyl cis-trans isomerase) (PPIase) (Rotamase) (25 kDa FKBP) (FKBP-25) (Rapamycin-selective 25 kDa immunophilin), transcript variant 2 (LOC480306), mRNA Length = 1006 Score = 44.1 bits (22), Expect = 0.45 Identities = 25/26 (96%) Strand = Plus / Plus Query: 426 actcatttttgaggtggaattagtgg 451 |||||||||||| ||||||||||||| Sbjct: 685 actcatttttgaagtggaattagtgg 710
>dbj|AB169619.1| Macaca fascicularis brain cDNA, clone: QtrA-11476, similar to human FK506 binding protein 3, 25kDa (FKBP3), mRNA, RefSeq: NM_002013.2 Length = 1015 Score = 44.1 bits (22), Expect = 0.45 Identities = 25/26 (96%) Strand = Plus / Plus Query: 426 actcatttttgaggtggaattagtgg 451 |||||||||||| ||||||||||||| Sbjct: 664 actcatttttgaagtggaattagtgg 689
>emb|AL772353.9| Mouse DNA sequence from clone RP23-390I8 on chromosome 4, complete sequence Length = 115141 Score = 44.1 bits (22), Expect = 0.45 Identities = 25/26 (96%) Strand = Plus / Plus Query: 210 ttatgaagggacacttgctgaaaatg 235 |||||||| ||||||||||||||||| Sbjct: 38509 ttatgaagagacacttgctgaaaatg 38534
>dbj|D82876.1| Oryctolagus cuniculus mRNA for binding protein, partial cds Length = 955 Score = 44.1 bits (22), Expect = 0.45 Identities = 25/26 (96%) Strand = Plus / Plus Query: 426 actcatttttgaggtggaattagtgg 451 |||||||||||| ||||||||||||| Sbjct: 637 actcatttttgaagtggaattagtgg 662
>gb|AC153729.1| Mus musculus BAC RP23-88C11 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 250801 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 310 gcatgggatctagccttaaga 330 ||||||||||||||||||||| Sbjct: 26896 gcatgggatctagccttaaga 26916
>gb|AC148517.3| Felis catus clone RP86-202K10, complete sequence Length = 75775 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 454 tgcaagccaaggaaaggttca 474 ||||||||||||||||||||| Sbjct: 19174 tgcaagccaaggaaaggttca 19194
>dbj|AK125358.1| Homo sapiens cDNA FLJ43368 fis, clone NT2RP8000483, moderately similar to Rattus norvegicus mRNA for Nadrin E2 Length = 4967 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 212 atgaagggacacttgctgaaa 232 ||||||||||||||||||||| Sbjct: 3318 atgaagggacacttgctgaaa 3338
>dbj|AK023281.1| Homo sapiens cDNA FLJ13219 fis, clone NT2RP4001849, weakly similar to SH3-BINDING PROTEIN 3BP-1 Length = 2918 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 212 atgaagggacacttgctgaaa 232 ||||||||||||||||||||| Sbjct: 1004 atgaagggacacttgctgaaa 1024
>gb|AC153969.12| Mus musculus 10 BAC RP24-86H7 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 209599 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 310 gcatgggatctagccttaaga 330 ||||||||||||||||||||| Sbjct: 113426 gcatgggatctagccttaaga 113406
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 267 ttctattttttcatttgaagt 287 ||||||||||||||||||||| Sbjct: 10028456 ttctattttttcatttgaagt 10028476
>dbj|AP006158.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:B1127C04 Length = 121441 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 267 ttctattttttcatttgaagt 287 ||||||||||||||||||||| Sbjct: 68358 ttctattttttcatttgaagt 68378
>emb|AJ851868.2| Mus musculus immunoglobulin heavy chain locus constant region and partial variable region, strain 129/Sv Length = 1382053 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 73 gaatctccattctacagcaag 93 ||||||||||||||||||||| Sbjct: 197710 gaatctccattctacagcaag 197690
>emb|AL672006.7| Mouse DNA sequence from clone RP23-28L9 on chromosome X, complete sequence Length = 80470 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 257 atgaagacaattctatttttt 277 ||||||||||||||||||||| Sbjct: 54431 atgaagacaattctatttttt 54411
>gb|AC124976.9| Mus musculus chromosome 3, clone RP24-84E6, complete sequence Length = 218027 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 254 cacatgaagacaattctatttttt 277 |||||||||| ||||||||||||| Sbjct: 134516 cacatgaagataattctatttttt 134539
>gb|AC136447.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0056F11, complete sequence Length = 89986 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 432 ttttgaggtggaattagtgg 451 |||||||||||||||||||| Sbjct: 53398 ttttgaggtggaattagtgg 53417
>gb|AC160095.1| Lycopersicon esculentum chromosome 0 clone BB-BA4 map MAP_LOC, complete sequence Length = 121127 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 484 agtgtatctgatgagaaagc 503 |||||||||||||||||||| Sbjct: 75627 agtgtatctgatgagaaagc 75608
>gb|AC108872.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBb0079P23, complete sequence Length = 125090 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 73 gaatctccattctacagcaa 92 |||||||||||||||||||| Sbjct: 13550 gaatctccattctacagcaa 13569
>ref|XM_854889.1| PREDICTED: Canis familiaris similar to FK506-binding protein 3 (Peptidyl-prolyl cis-trans isomerase) (PPIase) (Rotamase) (25 kDa FKBP) (FKBP-25) (Rapamycin-selective 25 kDa immunophilin), transcript variant 2 (LOC607841), mRNA Length = 890 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 426 actcatttttgaggtggaattagt 449 |||||||||||| ||||||||||| Sbjct: 563 actcatttttgaagtggaattagt 586
>ref|XM_844771.1| PREDICTED: Canis familiaris similar to FK506-binding protein 3 (Peptidyl-prolyl cis-trans isomerase) (PPIase) (Rotamase) (25 kDa FKBP) (FKBP-25) (Rapamycin-selective 25 kDa immunophilin), transcript variant 1 (LOC607841), mRNA Length = 987 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 426 actcatttttgaggtggaattagt 449 |||||||||||| ||||||||||| Sbjct: 660 actcatttttgaagtggaattagt 683
>ref|XM_847912.1| PREDICTED: Canis familiaris similar to FK506-binding protein 3 (Peptidyl-prolyl cis-trans isomerase) (PPIase) (Rotamase) (25 kDa FKBP) (FKBP-25) (Rapamycin-selective 25 kDa immunophilin) (LOC610412), mRNA Length = 984 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 426 actcatttttgaggtggaattagt 449 |||||||||||| ||||||||||| Sbjct: 653 actcatttttgaagtggaattagt 676
>gb|AC127290.3| Mus musculus BAC clone RP23-364F13 from chromosome 5, complete sequence Length = 187121 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 458 agccaaggaaaggttcaagt 477 |||||||||||||||||||| Sbjct: 94713 agccaaggaaaggttcaagt 94694
>emb|AL445487.8| Human DNA sequence from clone RP11-417L14 on chromosome 9 Contains a karyopherin alpha 2 (RAG cohort 1, importin alpha 1) (KPNA2) pseudogene, complete sequence Length = 112031 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 267 ttctattttttcatttgaagttgg 290 ||||||| |||||||||||||||| Sbjct: 109113 ttctattatttcatttgaagttgg 109090
>emb|AL136159.11| Human DNA sequence from clone RP11-165M6 on chromosome 13 Contains a novel gene and a ribosomal protein L35 (RPL35) pseudogene, complete sequence Length = 74012 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 354 aaaaataacatgcaagccag 373 |||||||||||||||||||| Sbjct: 7489 aaaaataacatgcaagccag 7470
>ref|XM_776189.1| PREDICTED: Strongylocentrotus purpuratus similar to FK506 binding protein 4 (LOC575816), mRNA Length = 1314 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 361 acatgcaagccagaatatgc 380 |||||||||||||||||||| Sbjct: 340 acatgcaagccagaatatgc 359
>emb|BX572090.1| Prochlorococcus marinus MED4 complete genome; segment 1/5 Length = 349742 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 224 ttgctgaaaatggggaagtttttg 247 ||||||||||| |||||||||||| Sbjct: 100617 ttgctgaaaattgggaagtttttg 100640
>emb|AL606608.3|OSJN00056 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0015K02, complete sequence Length = 153623 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 31 ctcgccggcgtccccggtgccacg 54 |||| ||||||||||||||||||| Sbjct: 132626 ctcgtcggcgtccccggtgccacg 132649
>emb|BX530098.6| Zebrafish DNA sequence from clone RP71-1G9, complete sequence Length = 156637 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 294 gggagctgtcattaaagcat 313 |||||||||||||||||||| Sbjct: 73141 gggagctgtcattaaagcat 73122
>gb|AF448740.1| Calumma nasuta NADH dehydrogenase subunit 1 (ND1) gene, partial cds; tRNA-Gln, tRNA-Ile, and tRNA-Met genes, complete sequence; NADH dehydrogenase subunit 2 (ND2) gene, complete cds; tRNA-Trp, tRNA-Ala, tRNA-Asn, tRNA-Cys, and tRNA-Tyr genes, complete sequence; and cytochrome c oxidase subunit I (COI) gene, partial cds; mitochondrial genes for mitochondrial products Length = 1733 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 342 tggtgaggttgcaaaaataa 361 |||||||||||||||||||| Sbjct: 875 tggtgaggttgcaaaaataa 856
>ref|XM_682669.1| PREDICTED: Danio rerio similar to cryptochrome 2a, transcript variant 1 (LOC573209), mRNA Length = 4474 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 294 gggagctgtcattaaagcat 313 |||||||||||||||||||| Sbjct: 4042 gggagctgtcattaaagcat 4023
>ref|XM_703800.1| PREDICTED: Danio rerio similar to cryptochrome 2a, transcript variant 4 (LOC573209), mRNA Length = 4568 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 294 gggagctgtcattaaagcat 313 |||||||||||||||||||| Sbjct: 4136 gggagctgtcattaaagcat 4117
>gb|AC011394.5| Homo sapiens chromosome 5 clone CTB-179K12, complete sequence Length = 86973 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 148 gttagaaaagcaaaggatga 167 |||||||||||||||||||| Sbjct: 56335 gttagaaaagcaaaggatga 56354
>emb|BX784023.10| Zebrafish DNA sequence from clone DKEY-163F12 in linkage group 8, complete sequence Length = 231254 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 294 gggagctgtcattaaagcat 313 |||||||||||||||||||| Sbjct: 4897 gggagctgtcattaaagcat 4878
>gb|AC093097.1| Drosophila melanogaster, chromosome 2L, region 36A-36B, BAC clone BACR26O03, complete sequence Length = 175413 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 264 caattctattttttcatttg 283 |||||||||||||||||||| Sbjct: 119128 caattctattttttcatttg 119147
>gb|AC018926.10|AC018926 Homo sapiens chromosome 15 clone RP11-139H15 map 15q21.3, complete sequence Length = 158033 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 274 ttttcatttgaagttggcca 293 |||||||||||||||||||| Sbjct: 67134 ttttcatttgaagttggcca 67115
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 31 ctcgccggcgtccccggtgccacg 54 |||| ||||||||||||||||||| Sbjct: 33782183 ctcgtcggcgtccccggtgccacg 33782206
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 73 gaatctccattctacagcaa 92 |||||||||||||||||||| Sbjct: 25074515 gaatctccattctacagcaa 25074534 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 432 ttttgaggtggaattagtgg 451 |||||||||||||||||||| Sbjct: 10953767 ttttgaggtggaattagtgg 10953748
>gb|AC078841.4|AC078841 Homo sapiens chromosome 7 clone RP11-377H23, complete sequence Length = 187497 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 383 atggaagtgcaggctcccca 402 |||||||||||||||||||| Sbjct: 8481 atggaagtgcaggctcccca 8500
>gb|AY796114.1| Lycopersicon esculentum clone Le_HBa 153G23 putative transposase, putative BAH domain-containing protein, putative permease I, putative pollen specific LIM domain-containing protein, putative betaine aldehyde dehyrogenase, EDS1, and putative ribosomal-protein S6 kinase-like protein genes, complete cds Length = 121127 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 484 agtgtatctgatgagaaagc 503 |||||||||||||||||||| Sbjct: 75627 agtgtatctgatgagaaagc 75608
>gb|AC083864.2|AC083864 Homo sapiens chromosome 7 clone RP11-196O2, complete sequence Length = 156064 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 383 atggaagtgcaggctcccca 402 |||||||||||||||||||| Sbjct: 87483 atggaagtgcaggctcccca 87464
>dbj|AP001309.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone:MUO10 Length = 77589 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 162 ggatgatgctataagcccat 181 |||||||||||||||||||| Sbjct: 26105 ggatgatgctataagcccat 26086
>gb|AC005119.9|AC005119 Drosophila melanogaster, chromosome 2L, region 36B1-36B2, P1 clone DS06436, complete sequence Length = 68379 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 264 caattctattttttcatttg 283 |||||||||||||||||||| Sbjct: 21565 caattctattttttcatttg 21584
>gb|AE003652.2| Drosophila melanogaster chromosome 2L, section 61 of 83 of the complete sequence Length = 262525 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 264 caattctattttttcatttg 283 |||||||||||||||||||| Sbjct: 130162 caattctattttttcatttg 130181
>emb|BX119925.7| Zebrafish DNA sequence from clone CH211-197K21 in linkage group 2, complete sequence Length = 151581 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 50 ccacggcagtcgctccaaac 69 |||||||||||||||||||| Sbjct: 150465 ccacggcagtcgctccaaac 150446
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 73 gaatctccattctacagcaa 92 |||||||||||||||||||| Sbjct: 25386105 gaatctccattctacagcaa 25386124 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 432 ttttgaggtggaattagtgg 451 |||||||||||||||||||| Sbjct: 11032956 ttttgaggtggaattagtgg 11032937
>dbj|AP006669.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT39I14, TM0368a, complete sequence Length = 18693 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 227 ctgaaaatggggaagttttt 246 |||||||||||||||||||| Sbjct: 9779 ctgaaaatggggaagttttt 9798
>dbj|AP006091.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT21D16, TM0157a, complete sequence Length = 72616 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 227 ctgaaaatggggaagttttt 246 |||||||||||||||||||| Sbjct: 51883 ctgaaaatggggaagttttt 51902
>emb|AL691503.6| Mouse DNA sequence from clone RP23-47N17 on chromosome X, complete sequence Length = 219711 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 256 catgaagacaattctatttt 275 |||||||||||||||||||| Sbjct: 159120 catgaagacaattctatttt 159139 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,980,984 Number of Sequences: 3902068 Number of extensions: 4980984 Number of successful extensions: 98723 Number of sequences better than 10.0: 85 Number of HSP's better than 10.0 without gapping: 87 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 98293 Number of HSP's gapped (non-prelim): 430 length of query: 523 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 500 effective length of database: 17,143,297,704 effective search space: 8571648852000 effective search space used: 8571648852000 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)