ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal25d01
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1MRS2_ASPFU (Q4WCV3) Inner membrane magnesium transporter mrs2, m... 49 4e-06
2MRS2_GIBZE (Q4I298) Inner membrane magnesium transporter MRS2, m... 45 3e-05
3MRS2_NEUCR (Q7SFQ9) Inner membrane magnesium transporter MRS2, m... 45 4e-05
4LPE10_YARLI (Q6C2P2) Inner membrane magnesium transporter LPE10,... 37 0.012
5MRS2_YARLI (Q6C8H7) Inner membrane magnesium transporter MRS2, m... 36 0.021
6LPE10_YEAST (Q02783) Inner membrane magnesium transporter LPE10,... 33 0.13
7LPE10_CANGA (Q6FJD1) Inner membrane magnesium transporter LPE10,... 33 0.17
8MRS2_SCHPO (P87149) Inner membrane magnesium transporter mrs2, m... 33 0.23
9MRS2L_PONPY (Q5R447) Magnesium transporter MRS2L, mitochondrial ... 32 0.30
10MRS2L_HUMAN (Q9HD23) Magnesium transporter MRS2L, mitochondrial ... 32 0.30
11MRS2L_MACFA (Q4R4M1) Magnesium transporter MRS2L, mitochondrial ... 32 0.30
12MRS2L_RAT (Q9ET09) Magnesium transporter MRS2L, mitochondrial pr... 31 0.87
13MRS2L_MOUSE (Q5NCE8) Magnesium transporter MRS2L, mitochondrial ... 31 0.87
14LPE10_KLULA (Q6CIB3) Inner membrane magnesium transporter LPE10,... 30 1.9
15CUL7_MOUSE (Q8VE73) Cullin-7 (CUL-7) (p185) (p193) (Fragment) 30 1.9
16SUS1_ARATH (P49040) Sucrose synthase (EC 2.4.1.13) (Sucrose-UDP ... 28 4.3
17CABIN_RAT (O88480) Calcineurin-binding protein Cabin 1 (Calcineu... 28 5.6
18LPE10_ASHGO (Q75A69) Inner membrane magnesium transporter LPE10,... 28 5.6

>MRS2_ASPFU (Q4WCV3) Inner membrane magnesium transporter mrs2, mitochondrial|
           precursor (RNA-splicing protein mrs2)
          Length = 597

 Score = 48.5 bits (114), Expect = 4e-06
 Identities = 35/113 (30%), Positives = 52/113 (46%), Gaps = 4/113 (3%)
 Frame = +1

Query: 1   DTRSVDPSLWLMNSMPSLLVREQAILLNLGSLRAIAMHERVLIFN-YNSPGG---KAFLE 168
           D R +D S     ++P +LVR  AIL+NL  LR +  H+RVL+F+ Y S        F+ 
Sbjct: 208 DLRKIDSS-----TLPHILVRPSAILINLLHLRVLIKHDRVLVFDAYGSTDSYMQSLFVY 262

Query: 169 XXXXXXXXXXXXXXXAMPFQLEVVEAALLSRIQRLEQRLMHVEPRVAALLEVL 327
                          A+P++   +EA L+S    LE+    V   V  +L  L
Sbjct: 263 DLEGKLQQKQTGGFGALPYEFRALEAVLISVTTGLEEEFNGVREPVVRVLRAL 315



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>MRS2_GIBZE (Q4I298) Inner membrane magnesium transporter MRS2, mitochondrial|
           precursor (RNA-splicing protein MRS2)
          Length = 498

 Score = 45.4 bits (106), Expect = 3e-05
 Identities = 34/113 (30%), Positives = 51/113 (45%), Gaps = 4/113 (3%)
 Frame = +1

Query: 1   DTRSVDPSLWLMNSMPSLLVREQAILLNLGSLRAIAMHERVLIFN-YNSPGG---KAFLE 168
           D R +D S     ++P +L+R  AILLNL  L+ +  H+RVL+F+ Y S       AF+ 
Sbjct: 164 DLRKIDSS-----NLPHILIRPSAILLNLLHLKVLIKHDRVLLFDIYGSKTSYPQSAFMY 218

Query: 169 XXXXXXXXXXXXXXXAMPFQLEVVEAALLSRIQRLEQRLMHVEPRVAALLEVL 327
                          ++P++   +EA L S    LE     V   V  +L  L
Sbjct: 219 DLQGKLQQKTAPGNASLPYEFRALEAVLTSVTSELEADFEAVREPVMHILSEL 271



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>MRS2_NEUCR (Q7SFQ9) Inner membrane magnesium transporter MRS2, mitochondrial|
           precursor (RNA-splicing protein MRS2)
          Length = 547

 Score = 45.1 bits (105), Expect = 4e-05
 Identities = 33/113 (29%), Positives = 51/113 (45%), Gaps = 4/113 (3%)
 Frame = +1

Query: 1   DTRSVDPSLWLMNSMPSLLVREQAILLNLGSLRAIAMHERVLIFN-YNSPGG---KAFLE 168
           D R +D S     ++P +L+R  AILLNL  L+ +  H+ VL+F+ Y S       AF+ 
Sbjct: 213 DLRKIDSS-----NLPHILIRPSAILLNLLHLKVLIKHDCVLLFDVYGSKSSYPQSAFMY 267

Query: 169 XXXXXXXXXXXXXXXAMPFQLEVVEAALLSRIQRLEQRLMHVEPRVAALLEVL 327
                          ++P++   +EA L+S    LE     V   V  +L  L
Sbjct: 268 DLQGKLQQKQSSGANSLPYEFRALEAVLMSVTSELEADFEAVRDPVIRILSEL 320



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>LPE10_YARLI (Q6C2P2) Inner membrane magnesium transporter LPE10, mitochondrial|
           precursor
          Length = 419

 Score = 37.0 bits (84), Expect = 0.012
 Identities = 31/111 (27%), Positives = 55/111 (49%), Gaps = 16/111 (14%)
 Frame = +1

Query: 1   DTRSVDPSLWLMNSMPSLLVREQ-----AILLNLGSLRAIAMHERVLIFNYNSPGGK--- 156
           D R++DPS   ++ +PS+L R +      IL+NL  ++A+ +H++VLIF+ +S       
Sbjct: 66  DLRNIDPSP--VSIIPSILARGRKGAGRCILVNLLHIKALILHDKVLIFDTHSKNKSDTH 123

Query: 157 ---AFL-----EXXXXXXXXXXXXXXXAMPFQLEVVEAALLSRIQRLEQRL 285
               FL     +                +PF+L V+EA L++ +  L+  L
Sbjct: 124 RLGMFLYELENKLKPTINPEKMHTDMTVLPFELRVLEAILVNVMTTLDGEL 174



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>MRS2_YARLI (Q6C8H7) Inner membrane magnesium transporter MRS2, mitochondrial|
           precursor (RNA-splicing protein MRS2)
          Length = 455

 Score = 36.2 bits (82), Expect = 0.021
 Identities = 26/99 (26%), Positives = 51/99 (51%), Gaps = 4/99 (4%)
 Frame = +1

Query: 1   DTRSVDPSLWLMNSM-PSLLVREQAILLNLGSLRAIAMHERVLIFN-YNSPGGK--AFLE 168
           D R +D  +   NS+ P++LVR+ +IL+NL  +RA+   ++VL+F+ + S   K  +   
Sbjct: 141 DLRKLDTGV---NSIVPTILVRDNSILINLLHIRALIKADKVLLFDVFGSTDSKTQSLFM 197

Query: 169 XXXXXXXXXXXXXXXAMPFQLEVVEAALLSRIQRLEQRL 285
                          ++P+++  +EA  +S I  L+  +
Sbjct: 198 YDLGHKLKKSNKTMGSLPYEMRALEAIFISVIAALDAEM 236



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>LPE10_YEAST (Q02783) Inner membrane magnesium transporter LPE10, mitochondrial|
           precursor
          Length = 413

 Score = 33.5 bits (75), Expect = 0.13
 Identities = 22/90 (24%), Positives = 42/90 (46%), Gaps = 9/90 (10%)
 Frame = +1

Query: 43  MPSLLVREQAILLNLGSLRAIAMHERVLIFN-------YNSPGGKAFLEXXXXXXXXXXX 201
           +PSLLVRE +IL++L +++A+   + V+IF+        NS   K F+            
Sbjct: 118 VPSLLVRENSILISLLTVKALIKPDMVIIFDSAGSGITLNSEAHKDFINDMKLRLKNQET 177

Query: 202 XXXXA--MPFQLEVVEAALLSRIQRLEQRL 285
               +  +P++   +E   +S +  L   +
Sbjct: 178 SELNSDPLPYEFRALETIFISALSNLTSEM 207



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>LPE10_CANGA (Q6FJD1) Inner membrane magnesium transporter LPE10, mitochondrial|
           precursor
          Length = 397

 Score = 33.1 bits (74), Expect = 0.17
 Identities = 20/87 (22%), Positives = 40/87 (45%), Gaps = 6/87 (6%)
 Frame = +1

Query: 43  MPSLLVREQAILLNLGSLRAIAMHERVLIF----NYNSPGGKAFLEX--XXXXXXXXXXX 204
           +PS LVR+  IL++L +++ +   + V++F    + NS   KAFL               
Sbjct: 108 VPSFLVRKNGILVSLATIKTLIKPDMVIVFDSFGSLNSTSHKAFLNSLKLRLQNLDMVEL 167

Query: 205 XXXAMPFQLEVVEAALLSRIQRLEQRL 285
               +P++   +E+  +S +  L   +
Sbjct: 168 KKDPLPYEFRALESIFISALSNLTSEM 194



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>MRS2_SCHPO (P87149) Inner membrane magnesium transporter mrs2, mitochondrial|
           precursor (RNA-splicing protein mrs2)
          Length = 422

 Score = 32.7 bits (73), Expect = 0.23
 Identities = 30/110 (27%), Positives = 53/110 (48%), Gaps = 4/110 (3%)
 Frame = +1

Query: 1   DTRSVDPSLWLMNSM-PSLLVREQAILLNLGSLRAIAMHERVLIFN-YNSPGGKAFLEXX 174
           D R ++ S+   NS+ P +LVRE +IL+NL  +RA+     VL+F+ Y S    +  +  
Sbjct: 113 DLRKLNTSI---NSIVPVILVREGSILINLLHIRALIKANSVLLFDVYGSQHSHSQSQFI 169

Query: 175 XXXXXXXXXXXXXA--MPFQLEVVEAALLSRIQRLEQRLMHVEPRVAALL 318
                           +P+++  +E  L+S +  L+  L  +   V+ LL
Sbjct: 170 YELEGRLKQKSSDFGWLPYEMRALETILVSVVNTLDSELHVLHNLVSDLL 219



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>MRS2L_PONPY (Q5R447) Magnesium transporter MRS2L, mitochondrial precursor|
           (MRS2-like protein)
          Length = 443

 Score = 32.3 bits (72), Expect = 0.30
 Identities = 22/94 (23%), Positives = 42/94 (44%), Gaps = 1/94 (1%)
 Frame = +1

Query: 49  SLLVREQAILLNLGSLRAIAMHERVLIFNYNSPGGKAFL-EXXXXXXXXXXXXXXXAMPF 225
           S+ VR   I++ +  L+A+   E +LI +Y +   + +L                  +PF
Sbjct: 125 SITVRNNRIIMRMEYLKAVITPECLLILDYRNLNLEQWLFRELPSQLSGEGQLVTYPLPF 184

Query: 226 QLEVVEAALLSRIQRLEQRLMHVEPRVAALLEVL 327
           +   +EA L   I  L+ +L  ++P +   L+ L
Sbjct: 185 EFRAIEALLQYWINTLQGKLSVLQPLILETLDAL 218



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>MRS2L_HUMAN (Q9HD23) Magnesium transporter MRS2L, mitochondrial precursor|
           (MRS2-like protein)
          Length = 443

 Score = 32.3 bits (72), Expect = 0.30
 Identities = 22/94 (23%), Positives = 42/94 (44%), Gaps = 1/94 (1%)
 Frame = +1

Query: 49  SLLVREQAILLNLGSLRAIAMHERVLIFNYNSPGGKAFL-EXXXXXXXXXXXXXXXAMPF 225
           S+ VR   I++ +  L+A+   E +LI +Y +   + +L                  +PF
Sbjct: 125 SITVRNNRIIMRMEYLKAVITPECLLILDYRNLNLEQWLFRELPSQLSGEGQLVTYPLPF 184

Query: 226 QLEVVEAALLSRIQRLEQRLMHVEPRVAALLEVL 327
           +   +EA L   I  L+ +L  ++P +   L+ L
Sbjct: 185 EFRAIEALLQYWINTLQGKLSILQPLILETLDAL 218



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>MRS2L_MACFA (Q4R4M1) Magnesium transporter MRS2L, mitochondrial precursor|
           (MRS2-like protein)
          Length = 408

 Score = 32.3 bits (72), Expect = 0.30
 Identities = 22/94 (23%), Positives = 42/94 (44%), Gaps = 1/94 (1%)
 Frame = +1

Query: 49  SLLVREQAILLNLGSLRAIAMHERVLIFNYNSPGGKAFL-EXXXXXXXXXXXXXXXAMPF 225
           S+ VR   I++ +  L+A+   E +LI +Y +   + +L                  +PF
Sbjct: 125 SITVRNNRIIMRMEYLKAVITPECLLILDYRNLNLEQWLFRELPSQLSGEGQLVTYPLPF 184

Query: 226 QLEVVEAALLSRIQRLEQRLMHVEPRVAALLEVL 327
           +   +EA L   I  L+ +L  ++P +   L+ L
Sbjct: 185 EFRAIEALLQYWINTLQGKLSILQPLILETLDAL 218



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>MRS2L_RAT (Q9ET09) Magnesium transporter MRS2L, mitochondrial precursor|
           (MRS2-like protein)
          Length = 434

 Score = 30.8 bits (68), Expect = 0.87
 Identities = 21/94 (22%), Positives = 41/94 (43%), Gaps = 1/94 (1%)
 Frame = +1

Query: 49  SLLVREQAILLNLGSLRAIAMHERVLIFNYNSPGGKAFL-EXXXXXXXXXXXXXXXAMPF 225
           S+  R   I++ +  L+A+   E +LI +Y +   + +L                  +PF
Sbjct: 116 SITTRNNRIIMRMEYLKAVITPEYLLILDYRNLNLEHWLFRELPSQLAGEGQLVTYPLPF 175

Query: 226 QLEVVEAALLSRIQRLEQRLMHVEPRVAALLEVL 327
           +   +EA L   I  L+ +L  ++P +   L+ L
Sbjct: 176 EFRAIEALLQYWINTLQGKLSILQPLILETLDAL 209



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>MRS2L_MOUSE (Q5NCE8) Magnesium transporter MRS2L, mitochondrial precursor|
           (MRS2-like protein)
          Length = 434

 Score = 30.8 bits (68), Expect = 0.87
 Identities = 22/94 (23%), Positives = 40/94 (42%), Gaps = 1/94 (1%)
 Frame = +1

Query: 49  SLLVREQAILLNLGSLRAIAMHERVLIFNYNSPGGKAFL-EXXXXXXXXXXXXXXXAMPF 225
           S+  R   I++ +  L+A+   E +LI +Y +   + +L                  +PF
Sbjct: 116 SITTRNNRIIMRMEYLKAVITPECLLILDYRNLNLEHWLFRELPSQLAGEGQLVTYPLPF 175

Query: 226 QLEVVEAALLSRIQRLEQRLMHVEPRVAALLEVL 327
           +   +EA L   I  L  RL  ++P +   L+ L
Sbjct: 176 EFRAIEALLQYWISTLRGRLSVLQPLILETLDAL 209



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>LPE10_KLULA (Q6CIB3) Inner membrane magnesium transporter LPE10, mitochondrial|
           precursor
          Length = 397

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 11/31 (35%), Positives = 25/31 (80%)
 Frame = +1

Query: 43  MPSLLVREQAILLNLGSLRAIAMHERVLIFN 135
           +PS+LVRE +IL+++ ++RA+   + +++F+
Sbjct: 105 VPSVLVRENSILVSILNIRALVKSDMLILFD 135



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>CUL7_MOUSE (Q8VE73) Cullin-7 (CUL-7) (p185) (p193) (Fragment)|
          Length = 913

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 14/23 (60%), Positives = 17/23 (73%)
 Frame = +1

Query: 244 AALLSRIQRLEQRLMHVEPRVAA 312
           AA  SR++RL   L+HVEPR AA
Sbjct: 290 AAFSSRVRRLTHLLVHVEPREAA 312



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>SUS1_ARATH (P49040) Sucrose synthase (EC 2.4.1.13) (Sucrose-UDP|
           glucosyltransferase)
          Length = 806

 Score = 28.5 bits (62), Expect = 4.3
 Identities = 11/35 (31%), Positives = 24/35 (68%)
 Frame = +1

Query: 229 LEVVEAALLSRIQRLEQRLMHVEPRVAALLEVLPN 333
           L+ V A  +  +QR++Q+ ++++PR+  L  +LP+
Sbjct: 309 LDQVRALEIEMLQRIKQQGLNIKPRILILTRLLPD 343



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>CABIN_RAT (O88480) Calcineurin-binding protein Cabin 1 (Calcineurin inhibitor)|
            (CAIN)
          Length = 2182

 Score = 28.1 bits (61), Expect = 5.6
 Identities = 21/60 (35%), Positives = 24/60 (40%), Gaps = 2/60 (3%)
 Frame = +3

Query: 45   AFPAGT*AGHITQPWFLASNCYA*ACPYIQL*QPRRKGLFRAITTPVKSKEHQ--WWACD 218
            AFP G  AG   Q  FL   C A  C  +       K L+R       SK H+   WA D
Sbjct: 1492 AFPQGLPAGAEEQRQFLTEQCIASFCLCLSRFPQHYKSLYRLAFLYTYSKTHRNLQWARD 1551



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>LPE10_ASHGO (Q75A69) Inner membrane magnesium transporter LPE10, mitochondrial|
           precursor
          Length = 330

 Score = 28.1 bits (61), Expect = 5.6
 Identities = 11/31 (35%), Positives = 24/31 (77%)
 Frame = +1

Query: 43  MPSLLVREQAILLNLGSLRAIAMHERVLIFN 135
           +P +LVR++ I+++L ++RA+   + VL+F+
Sbjct: 44  VPIVLVRDRCIMVSLLTIRALVKSDTVLLFD 74


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 48,780,542
Number of Sequences: 219361
Number of extensions: 886270
Number of successful extensions: 1741
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1723
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1741
length of database: 80,573,946
effective HSP length: 90
effective length of database: 60,831,456
effective search space used: 1459954944
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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