| Clone Name | baal24n21 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK120554.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013130M21, full insert sequence Length = 2056 Score = 448 bits (226), Expect = e-123 Identities = 375/425 (88%) Strand = Plus / Plus Query: 36 ctgctcttcgtctggcccgacgagaacggctgggacaaggccaaggcgaccaaacctcca 95 ||||||||||| |||||||||||||| || ||||| ||||||| ||| ||||| ||||| Sbjct: 849 ctgctcttcgtgtggcccgacgagaatgggtgggagaaggccacggctaccaagcctccg 908 Query: 96 atgttgccgaaagagttcgatgacccggccttctccacggtgacgatccagagggacctc 155 ||||| ||||| ||||| || || || || |||||||||||||| ||||||||||| || Sbjct: 909 atgttaccgaaggagtttgaggatcctgcgttctccacggtgaccatccagagggatctg 968 Query: 156 ttctatgggtatgacaccttgatggagaacgtctctgatccctcgcacatagaatttgct 215 | |||||| ||||| || ||||||||||||||||||||||| ||||| |||||||||||| Sbjct: 969 tactatggctatgatacattgatggagaacgtctctgatccgtcgcatatagaatttgct 1028 Query: 216 naccacaaggtcactgggcgaagagatagagccaagcctttgccgttcaaaatggaatca 275 |||||||||||||||| ||||||||| |||||| ||||||||| ||||| ||||||||| Sbjct: 1029 caccacaaggtcactggtcgaagagatcgagccaggcctttgccattcaagatggaatca 1088 Query: 276 agcggcgcatggggatattcaggggcaaataccggtaaccctcgcatcactgcaactttc 335 || || |||||||||||||||||| ||||| | || ||||||||||||| ||||||||| Sbjct: 1089 agtggtgcatggggatattcagggtcaaattctggaaaccctcgcatcagtgcaactttt 1148 Query: 336 gaggccccttgctatgcactgaacaagatagagatcgacactaaattacccattgtggga 395 | |||||||||||||||||||||||| || ||||| ||||| || ||||||||| | ||| Sbjct: 1149 gtggccccttgctatgcactgaacaaaattgagatagacacaaagttacccatttttgga 1208 Query: 396 gatcagaaatgggtgatatggatttgctccttcaacattcccatggccccagggaaaact 455 |||||||||||||| |||||||||||||| ||||||||||| |||||||||||||| ||| Sbjct: 1209 gatcagaaatgggtcatatggatttgctctttcaacattccaatggccccagggaagact 1268 Query: 456 cgttc 460 ||||| Sbjct: 1269 cgttc 1273
>dbj|AK111974.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-003-D01, full insert sequence Length = 2098 Score = 448 bits (226), Expect = e-123 Identities = 375/425 (88%) Strand = Plus / Plus Query: 36 ctgctcttcgtctggcccgacgagaacggctgggacaaggccaaggcgaccaaacctcca 95 ||||||||||| |||||||||||||| || ||||| ||||||| ||| ||||| ||||| Sbjct: 892 ctgctcttcgtgtggcccgacgagaatgggtgggagaaggccacggctaccaagcctccg 951 Query: 96 atgttgccgaaagagttcgatgacccggccttctccacggtgacgatccagagggacctc 155 ||||| ||||| ||||| || || || || |||||||||||||| ||||||||||| || Sbjct: 952 atgttaccgaaggagtttgaggatcctgcgttctccacggtgaccatccagagggatctg 1011 Query: 156 ttctatgggtatgacaccttgatggagaacgtctctgatccctcgcacatagaatttgct 215 | |||||| ||||| || ||||||||||||||||||||||| ||||| |||||||||||| Sbjct: 1012 tactatggctatgatacattgatggagaacgtctctgatccgtcgcatatagaatttgct 1071 Query: 216 naccacaaggtcactgggcgaagagatagagccaagcctttgccgttcaaaatggaatca 275 |||||||||||||||| ||||||||| |||||| ||||||||| ||||| ||||||||| Sbjct: 1072 caccacaaggtcactggtcgaagagatcgagccaggcctttgccattcaagatggaatca 1131 Query: 276 agcggcgcatggggatattcaggggcaaataccggtaaccctcgcatcactgcaactttc 335 || || |||||||||||||||||| ||||| | || ||||||||||||| ||||||||| Sbjct: 1132 agtggtgcatggggatattcagggtcaaattctggaaaccctcgcatcagtgcaactttt 1191 Query: 336 gaggccccttgctatgcactgaacaagatagagatcgacactaaattacccattgtggga 395 | |||||||||||||||||||||||| || ||||| ||||| || ||||||||| | ||| Sbjct: 1192 gtggccccttgctatgcactgaacaaaattgagatagacacaaagttacccatttttgga 1251 Query: 396 gatcagaaatgggtgatatggatttgctccttcaacattcccatggccccagggaaaact 455 |||||||||||||| |||||||||||||| ||||||||||| |||||||||||||| ||| Sbjct: 1252 gatcagaaatgggtcatatggatttgctctttcaacattccaatggccccagggaagact 1311 Query: 456 cgttc 460 ||||| Sbjct: 1312 cgttc 1316
>gb|U77345.1|ZMU77345 Zea mays lethal leaf-spot 1 (lls1) mRNA, partial cds Length = 1683 Score = 404 bits (204), Expect = e-109 Identities = 389/450 (86%), Gaps = 1/450 (0%) Strand = Plus / Plus Query: 11 ttccccacgctcctctcccagggncctgctcttcgtctggcccgacgagaacggctggga 70 |||||||| ||| |||||||||| | |||||||||| |||||||| ||||| || ||||| Sbjct: 362 ttccccaccctcgtctcccaggggc-tgctcttcgtgtggcccgatgagaatgggtggga 420 Query: 71 caaggccaaggcgaccaaacctccaatgttgccgaaagagttcgatgacccggccttctc 130 || || || ||||| |||||||||||||||||||| || || |||||||||||||| Sbjct: 421 gaaagcggccgccaccaagcctccaatgttgccgaaagaatttgaggacccggccttctc 480 Query: 131 cacggtgacgatccagagggacctcttctatgggtatgacaccttgatggagaacgtctc 190 ||||||||| |||||||||||| | |||||||| ||||| || ||||||||||||||||| Sbjct: 481 cacggtgacaatccagagggacttgttctatggttatgatacgttgatggagaacgtctc 540 Query: 191 tgatccctcgcacatagaatttgctnaccacaaggtcactgggcgaagagatagagccaa 250 |||||| || || |||||||||||| |||||||||| ||||| |||||||||||||||| Sbjct: 541 tgatccgtcccatatagaatttgctcaccacaaggttactggacgaagagatagagccag 600 Query: 251 gcctttgccgttcaaaatggaatcaagcggcgcatggggatattcaggggcaaataccgg 310 ||||||| | |||| ||||||||||| || || ||||| || ||||| |||||| | || Sbjct: 601 gcctttgacattcaggatggaatcaagtggtgcctggggttactcaggagcaaattctgg 660 Query: 311 taaccctcgcatcactgcaactttcgaggccccttgctatgcactgaacaagatagagat 370 ||| |||||||| ||||||||||| ||||||||||| |||||| ||||||| |||||||| Sbjct: 661 taatcctcgcattactgcaacttttgaggccccttgttatgcattgaacaaaatagagat 720 Query: 371 cgacactaaattacccattgtgggagatcagaaatgggtgatatggatttgctccttcaa 430 ||||| || ||||||||| | || || ||||||||||| |||||||||||||| ||||| Sbjct: 721 agacacaaagttacccatttttggcgaccagaaatgggtcatatggatttgctctttcaa 780 Query: 431 cattcccatggccccagggaaaactcgttc 460 |||||| |||||||||||||| |||||||| Sbjct: 781 cattccaatggccccagggaagactcgttc 810
>gb|AY110853.1| Zea mays CL10_1 mRNA sequence Length = 2131 Score = 391 bits (197), Expect = e-105 Identities = 386/450 (85%), Gaps = 1/450 (0%) Strand = Plus / Plus Query: 11 ttccccacgctcctctcccagggncctgctcttcgtctggcccgacgagaacggctggga 70 |||||||| ||| |||||||||| | |||||||||| |||||||| ||||| || ||||| Sbjct: 809 ttccccaccctcgtctcccaggggc-tgctcttcgtgtggcccgatgagaatgggtggga 867 Query: 71 caaggccaaggcgaccaaacctccaatgttgccgaaagagttcgatgacccggccttctc 130 || || || ||||| |||||||||||||||||||| || || |||||||||||||| Sbjct: 868 gaaagcggccgccaccaagcctccaatgttgccgaaagaatttgaggacccggccttctc 927 Query: 131 cacggtgacgatccagagggacctcttctatgggtatgacaccttgatggagaacgtctc 190 ||||||||| |||||||||||| | |||||||| ||||| || ||||||||||||||||| Sbjct: 928 cacggtgacaatccagagggacttgttctatggttatgatacgttgatggagaacgtctc 987 Query: 191 tgatccctcgcacatagaatttgctnaccacaaggtcactgggcgaagagatagagccaa 250 |||||| || || |||||||||||| |||||||||| ||||| |||||||||||||||| Sbjct: 988 tgatccgtcccatatagaatttgctcaccacaaggttactggacgaagagatagagccag 1047 Query: 251 gcctttgccgttcaaaatggaatcaagcggcgcatggggatattcaggggcaaataccgg 310 ||||||| | |||| ||||||||||| || || ||||| || ||||| |||||| | || Sbjct: 1048 gcctttgacattcaggatggaatcaagtggtgcctggggttactcaggagcaaattctgg 1107 Query: 311 taaccctcgcatcactgcaactttcgaggccccttgctatgcactgaacaagatagagat 370 ||| |||||||| ||||||||||| ||||||||||| |||||| ||||||| |||||||| Sbjct: 1108 taatcctcgcattactgcaacttttgaggccccttgttatgcattgaacaaaatagagat 1167 Query: 371 cgacactaaattacccattgtgggagatcagaaatgggtgatatggatttgctccttcaa 430 ||||| || ||||||| || || ||||||||||| |||||||||||||| ||||| Sbjct: 1168 agacacaaagttacccannnnnggcgaccagaaatgggtcatatggatttgctctttcaa 1227 Query: 431 cattcccatggccccagggaaaactcgttc 460 |||||| |||||||||||||| |||||||| Sbjct: 1228 cattccaatggccccagggaagactcgttc 1257
>ref|XM_470215.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1548 Score = 389 bits (196), Expect = e-105 Identities = 300/335 (89%) Strand = Plus / Plus Query: 126 ttctccacggtgacgatccagagggacctcttctatgggtatgacaccttgatggagaac 185 |||||||||||||| ||||||||||| || | |||||| ||||| || |||||||||||| Sbjct: 619 ttctccacggtgaccatccagagggatctgtactatggctatgatacattgatggagaac 678 Query: 186 gtctctgatccctcgcacatagaatttgctnaccacaaggtcactgggcgaagagataga 245 ||||||||||| ||||| |||||||||||| |||||||||||||||| ||||||||| || Sbjct: 679 gtctctgatccgtcgcatatagaatttgctcaccacaaggtcactggtcgaagagatcga 738 Query: 246 gccaagcctttgccgttcaaaatggaatcaagcggcgcatggggatattcaggggcaaat 305 |||| ||||||||| ||||| ||||||||||| || |||||||||||||||||| ||||| Sbjct: 739 gccaggcctttgccattcaagatggaatcaagtggtgcatggggatattcagggtcaaat 798 Query: 306 accggtaaccctcgcatcactgcaactttcgaggccccttgctatgcactgaacaagata 365 | || ||||||||||||| ||||||||| | |||||||||||||||||||||||| || Sbjct: 799 tctggaaaccctcgcatcagtgcaacttttgtggccccttgctatgcactgaacaaaatt 858 Query: 366 gagatcgacactaaattacccattgtgggagatcagaaatgggtgatatggatttgctcc 425 ||||| ||||| || ||||||||| | ||||||||||||||||| |||||||||||||| Sbjct: 859 gagatagacacaaagttacccatttttggagatcagaaatgggtcatatggatttgctct 918 Query: 426 ttcaacattcccatggccccagggaaaactcgttc 460 ||||||||||| |||||||||||||| |||||||| Sbjct: 919 ttcaacattccaatggccccagggaagactcgttc 953 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Plus Query: 36 ctgctcttcgtctggcccgacgagaa 61 ||||||||||| |||||||||||||| Sbjct: 562 ctgctcttcgtgtggcccgacgagaa 587
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 167 bits (84), Expect = 4e-38 Identities = 126/140 (90%) Strand = Plus / Plus Query: 223 aggtcactgggcgaagagatagagccaagcctttgccgttcaaaatggaatcaagcggcg 282 |||||||||| ||||||||| |||||| ||||||||| ||||| ||||||||||| || | Sbjct: 2560078 aggtcactggtcgaagagatcgagccaggcctttgccattcaagatggaatcaagtggtg 2560137 Query: 283 catggggatattcaggggcaaataccggtaaccctcgcatcactgcaactttcgaggccc 342 ||||||||||||||||| ||||| | || ||||||||||||| ||||||||| | ||||| Sbjct: 2560138 catggggatattcagggtcaaattctggaaaccctcgcatcagtgcaacttttgtggccc 2560197 Query: 343 cttgctatgcactgaacaag 362 |||||||||||||||||||| Sbjct: 2560198 cttgctatgcactgaacaag 2560217 Score = 123 bits (62), Expect = 5e-25 Identities = 91/101 (90%) Strand = Plus / Plus Query: 126 ttctccacggtgacgatccagagggacctcttctatgggtatgacaccttgatggagaac 185 |||||||||||||| ||||||||||| || | |||||| ||||| || |||||||||||| Sbjct: 2559455 ttctccacggtgaccatccagagggatctgtactatggctatgatacattgatggagaac 2559514 Query: 186 gtctctgatccctcgcacatagaatttgctnaccacaaggt 226 ||||||||||| ||||| |||||||||||| |||||||||| Sbjct: 2559515 gtctctgatccgtcgcatatagaatttgctcaccacaaggt 2559555 Score = 117 bits (59), Expect = 3e-23 Identities = 86/95 (90%) Strand = Plus / Plus Query: 366 gagatcgacactaaattacccattgtgggagatcagaaatgggtgatatggatttgctcc 425 ||||| ||||| || ||||||||| | ||||||||||||||||| |||||||||||||| Sbjct: 2560361 gagatagacacaaagttacccatttttggagatcagaaatgggtcatatggatttgctct 2560420 Query: 426 ttcaacattcccatggccccagggaaaactcgttc 460 ||||||||||| |||||||||||||| |||||||| Sbjct: 2560421 ttcaacattccaatggccccagggaagactcgttc 2560455 Score = 63.9 bits (32), Expect = 4e-07 Identities = 56/64 (87%) Strand = Plus / Plus Query: 36 ctgctcttcgtctggcccgacgagaacggctgggacaaggccaaggcgaccaaacctcca 95 ||||||||||| |||||||||||||| || ||||| ||||||| ||| ||||| ||||| Sbjct: 2559278 ctgctcttcgtgtggcccgacgagaatgggtgggagaaggccacggctaccaagcctccg 2559337 Query: 96 atgt 99 |||| Sbjct: 2559338 atgt 2559341
>gb|AC090485.3|AC090485 Genomic Sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0067N01, from chromosome 3, complete sequence Length = 159636 Score = 167 bits (84), Expect = 4e-38 Identities = 126/140 (90%) Strand = Plus / Minus Query: 223 aggtcactgggcgaagagatagagccaagcctttgccgttcaaaatggaatcaagcggcg 282 |||||||||| ||||||||| |||||| ||||||||| ||||| ||||||||||| || | Sbjct: 110016 aggtcactggtcgaagagatcgagccaggcctttgccattcaagatggaatcaagtggtg 109957 Query: 283 catggggatattcaggggcaaataccggtaaccctcgcatcactgcaactttcgaggccc 342 ||||||||||||||||| ||||| | || ||||||||||||| ||||||||| | ||||| Sbjct: 109956 catggggatattcagggtcaaattctggaaaccctcgcatcagtgcaacttttgtggccc 109897 Query: 343 cttgctatgcactgaacaag 362 |||||||||||||||||||| Sbjct: 109896 cttgctatgcactgaacaag 109877 Score = 123 bits (62), Expect = 5e-25 Identities = 91/101 (90%) Strand = Plus / Minus Query: 126 ttctccacggtgacgatccagagggacctcttctatgggtatgacaccttgatggagaac 185 |||||||||||||| ||||||||||| || | |||||| ||||| || |||||||||||| Sbjct: 110639 ttctccacggtgaccatccagagggatctgtactatggctatgatacattgatggagaac 110580 Query: 186 gtctctgatccctcgcacatagaatttgctnaccacaaggt 226 ||||||||||| ||||| |||||||||||| |||||||||| Sbjct: 110579 gtctctgatccgtcgcatatagaatttgctcaccacaaggt 110539 Score = 117 bits (59), Expect = 3e-23 Identities = 86/95 (90%) Strand = Plus / Minus Query: 366 gagatcgacactaaattacccattgtgggagatcagaaatgggtgatatggatttgctcc 425 ||||| ||||| || ||||||||| | ||||||||||||||||| |||||||||||||| Sbjct: 109733 gagatagacacaaagttacccatttttggagatcagaaatgggtcatatggatttgctct 109674 Query: 426 ttcaacattcccatggccccagggaaaactcgttc 460 ||||||||||| |||||||||||||| |||||||| Sbjct: 109673 ttcaacattccaatggccccagggaagactcgttc 109639 Score = 63.9 bits (32), Expect = 4e-07 Identities = 56/64 (87%) Strand = Plus / Minus Query: 36 ctgctcttcgtctggcccgacgagaacggctgggacaaggccaaggcgaccaaacctcca 95 ||||||||||| |||||||||||||| || ||||| ||||||| ||| ||||| ||||| Sbjct: 110816 ctgctcttcgtgtggcccgacgagaatgggtgggagaaggccacggctaccaagcctccg 110757 Query: 96 atgt 99 |||| Sbjct: 110756 atgt 110753
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 167 bits (84), Expect = 4e-38 Identities = 126/140 (90%) Strand = Plus / Plus Query: 223 aggtcactgggcgaagagatagagccaagcctttgccgttcaaaatggaatcaagcggcg 282 |||||||||| ||||||||| |||||| ||||||||| ||||| ||||||||||| || | Sbjct: 2560188 aggtcactggtcgaagagatcgagccaggcctttgccattcaagatggaatcaagtggtg 2560247 Query: 283 catggggatattcaggggcaaataccggtaaccctcgcatcactgcaactttcgaggccc 342 ||||||||||||||||| ||||| | || ||||||||||||| ||||||||| | ||||| Sbjct: 2560248 catggggatattcagggtcaaattctggaaaccctcgcatcagtgcaacttttgtggccc 2560307 Query: 343 cttgctatgcactgaacaag 362 |||||||||||||||||||| Sbjct: 2560308 cttgctatgcactgaacaag 2560327 Score = 123 bits (62), Expect = 5e-25 Identities = 91/101 (90%) Strand = Plus / Plus Query: 126 ttctccacggtgacgatccagagggacctcttctatgggtatgacaccttgatggagaac 185 |||||||||||||| ||||||||||| || | |||||| ||||| || |||||||||||| Sbjct: 2559565 ttctccacggtgaccatccagagggatctgtactatggctatgatacattgatggagaac 2559624 Query: 186 gtctctgatccctcgcacatagaatttgctnaccacaaggt 226 ||||||||||| ||||| |||||||||||| |||||||||| Sbjct: 2559625 gtctctgatccgtcgcatatagaatttgctcaccacaaggt 2559665 Score = 117 bits (59), Expect = 3e-23 Identities = 86/95 (90%) Strand = Plus / Plus Query: 366 gagatcgacactaaattacccattgtgggagatcagaaatgggtgatatggatttgctcc 425 ||||| ||||| || ||||||||| | ||||||||||||||||| |||||||||||||| Sbjct: 2560471 gagatagacacaaagttacccatttttggagatcagaaatgggtcatatggatttgctct 2560530 Query: 426 ttcaacattcccatggccccagggaaaactcgttc 460 ||||||||||| |||||||||||||| |||||||| Sbjct: 2560531 ttcaacattccaatggccccagggaagactcgttc 2560565 Score = 63.9 bits (32), Expect = 4e-07 Identities = 56/64 (87%) Strand = Plus / Plus Query: 36 ctgctcttcgtctggcccgacgagaacggctgggacaaggccaaggcgaccaaacctcca 95 ||||||||||| |||||||||||||| || ||||| ||||||| ||| ||||| ||||| Sbjct: 2559388 ctgctcttcgtgtggcccgacgagaatgggtgggagaaggccacggctaccaagcctccg 2559447 Query: 96 atgt 99 |||| Sbjct: 2559448 atgt 2559451
>gb|U77346.1|ZMU77346 Zea mays lethal leaf-spot 1 (lls-1) gene, partial cds; and unknown gene Length = 7129 Score = 155 bits (78), Expect = 2e-34 Identities = 116/129 (89%) Strand = Plus / Plus Query: 98 gttgccgaaagagttcgatgacccggccttctccacggtgacgatccagagggacctctt 157 |||||||||||| || || ||||||||||||||||||||||| |||||||||||| | || Sbjct: 4178 gttgccgaaagaatttgaggacccggccttctccacggtgacaatccagagggacttgtt 4237 Query: 158 ctatgggtatgacaccttgatggagaacgtctctgatccctcgcacatagaatttgctna 217 |||||| ||||| || ||||||||||||||||||||||| || || |||||||||||| | Sbjct: 4238 ctatggttatgatacgttgatggagaacgtctctgatccgtcccatatagaatttgctca 4297 Query: 218 ccacaaggt 226 ||||||||| Sbjct: 4298 ccacaaggt 4306 Score = 111 bits (56), Expect = 2e-21 Identities = 119/140 (85%) Strand = Plus / Plus Query: 223 aggtcactgggcgaagagatagagccaagcctttgccgttcaaaatggaatcaagcggcg 282 |||| ||||| |||||||||||||||| ||||||| | |||| ||||||||||| || | Sbjct: 5478 aggttactggacgaagagatagagccaggcctttgacattcaggatggaatcaagtggtg 5537 Query: 283 catggggatattcaggggcaaataccggtaaccctcgcatcactgcaactttcgaggccc 342 | ||||| || ||||| |||||| | ||||| |||||||| ||||||||||| ||||||| Sbjct: 5538 cctggggttactcaggagcaaattctggtaatcctcgcattactgcaacttttgaggccc 5597 Query: 343 cttgctatgcactgaacaag 362 |||| |||||| | |||||| Sbjct: 5598 cttgttatgcattaaacaag 5617 Score = 107 bits (54), Expect = 3e-20 Identities = 87/98 (88%) Strand = Plus / Plus Query: 363 atagagatcgacactaaattacccattgtgggagatcagaaatgggtgatatggatttgc 422 |||||||| ||||| || ||||||||| | || || ||||||||||| |||||||||||| Sbjct: 5730 atagagatagacacaaagttacccatttttggcgaccagaaatgggtcatatggatttgc 5789 Query: 423 tccttcaacattcccatggccccagggaaaactcgttc 460 || ||||||||||| |||||||||||||| |||||||| Sbjct: 5790 tctttcaacattccaatggccccagggaagactcgttc 5827 Score = 50.1 bits (25), Expect = 0.006 Identities = 52/60 (86%), Gaps = 1/60 (1%) Strand = Plus / Plus Query: 11 ttccccacgctcctctcccagggncctgctcttcgtctggcccgacgagaacggctggga 70 |||||||| ||| |||||||||| | |||||||||| |||||||| ||||| || ||||| Sbjct: 4004 ttccccaccctcgtctcccaggggc-tgctcttcgtgtggcccgatgagaatgggtggga 4062
>gb|AY257179.1| Vigna unguiculata lethal leaf spot 1-like protein mRNA, complete cds Length = 1849 Score = 71.9 bits (36), Expect = 2e-09 Identities = 80/95 (84%) Strand = Plus / Plus Query: 177 atggagaacgtctctgatccctcgcacatagaatttgctnaccacaaggtcactgggcga 236 |||||||| ||||||||||| || ||||| || |||||| | ||||||||||| || | Sbjct: 825 atggagaatgtctctgatccttctcacattgagtttgctcatcacaaggtcacaggaagg 884 Query: 237 agagatagagccaagcctttgccgttcaaaatgga 271 ||||| |||||||||||| |||| ||||| ||||| Sbjct: 885 agagacagagccaagcctctgccattcaagatgga 919
>gb|AF321984.1|AF321984 Lycopersicon esculentum lethal leaf spot 1-like protein mRNA, complete cds Length = 1717 Score = 67.9 bits (34), Expect = 3e-08 Identities = 93/113 (82%) Strand = Plus / Plus Query: 159 tatgggtatgacaccttgatggagaacgtctctgatccctcgcacatagaatttgctnac 218 ||||| |||||||| | |||||||||||||||||||| || ||||| || ||||| || Sbjct: 773 tatggctatgacactctcatggagaacgtctctgatccttctcacattgattttgcacac 832 Query: 219 cacaaggtcactgggcgaagagatagagccaagcctttgccgttcaaaatgga 271 |||||||| ||||| | |||| ||||| ||||| ||||| ||||| ||||| Sbjct: 833 cacaaggttactggaaggcgagacagagcaaagcccttgccattcaagatgga 885 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 363 atagagatcgacactaaattacccattgtgggagatcagaaatgggtgatatggatttgc 422 |||||||||||||| || | || || ||||| |||||||| ||||||||||||||||| Sbjct: 977 atagagatcgacacaaagcttccaatcgtgggtgatcagaagtgggtgatatggatttgt 1036 Query: 423 tcctt 427 ||||| Sbjct: 1037 tcctt 1041
>ref|NM_114357.4| Arabidopsis thaliana ACD1 (ACCELERATED CELL DEATH 1); oxidoreductase AT3G44880 (ACD1) mRNA, complete cds Length = 1984 Score = 61.9 bits (31), Expect = 2e-06 Identities = 108/134 (80%) Strand = Plus / Plus Query: 132 acggtgacgatccagagggacctcttctatgggtatgacaccttgatggagaacgtctct 191 |||||||| || || ||||| || |||||||| ||||| || | ||||| || || ||| Sbjct: 948 acggtgacaattcaaagggatcttttctatggatatgatactctcatggaaaatgtatct 1007 Query: 192 gatccctcgcacatagaatttgctnaccacaaggtcactgggcgaagagatagagccaag 251 ||||| || || ||||| |||||| | |||||||| || || ||||||| |||||||| Sbjct: 1008 gatccttcccatatagattttgctcatcacaaggttacaggaagaagagacagagccaaa 1067 Query: 252 cctttgccgttcaa 265 || ||||||||||| Sbjct: 1068 ccattgccgttcaa 1081 Score = 40.1 bits (20), Expect = 6.3 Identities = 44/52 (84%) Strand = Plus / Plus Query: 397 atcagaaatgggtgatatggatttgctccttcaacattcccatggccccagg 448 |||| |||||||| || ||||||||||| ||||| || || ||||| ||||| Sbjct: 1213 atcaaaaatgggtcatttggatttgctcattcaatataccaatggctccagg 1264
>gb|AY093092.1| Arabidopsis thaliana lethal leaf-spot 1 homolog Lls1 (At3g44880) mRNA, complete cds Length = 1737 Score = 61.9 bits (31), Expect = 2e-06 Identities = 108/134 (80%) Strand = Plus / Plus Query: 132 acggtgacgatccagagggacctcttctatgggtatgacaccttgatggagaacgtctct 191 |||||||| || || ||||| || |||||||| ||||| || | ||||| || || ||| Sbjct: 733 acggtgacaattcaaagggatcttttctatggatatgatactctcatggaaaatgtatct 792 Query: 192 gatccctcgcacatagaatttgctnaccacaaggtcactgggcgaagagatagagccaag 251 ||||| || || ||||| |||||| | |||||||| || || ||||||| |||||||| Sbjct: 793 gatccttcccatatagattttgctcatcacaaggttacaggaagaagagacagagccaaa 852 Query: 252 cctttgccgttcaa 265 || ||||||||||| Sbjct: 853 ccattgccgttcaa 866 Score = 40.1 bits (20), Expect = 6.3 Identities = 44/52 (84%) Strand = Plus / Plus Query: 397 atcagaaatgggtgatatggatttgctccttcaacattcccatggccccagg 448 |||| |||||||| || ||||||||||| ||||| || || ||||| ||||| Sbjct: 998 atcaaaaatgggtcatttggatttgctcattcaatataccaatggctccagg 1049
>gb|AY344061.1| Arabidopsis thaliana accelerated cell death 1 (ACD1) mRNA, complete cds Length = 1614 Score = 61.9 bits (31), Expect = 2e-06 Identities = 108/134 (80%) Strand = Plus / Plus Query: 132 acggtgacgatccagagggacctcttctatgggtatgacaccttgatggagaacgtctct 191 |||||||| || || ||||| || |||||||| ||||| || | ||||| || || ||| Sbjct: 685 acggtgacaattcaaagggatcttttctatggatatgatactctcatggaaaatgtatct 744 Query: 192 gatccctcgcacatagaatttgctnaccacaaggtcactgggcgaagagatagagccaag 251 ||||| || || ||||| |||||| | |||||||| || || ||||||| |||||||| Sbjct: 745 gatccttcccatatagattttgctcatcacaaggttacaggaagaagagacagagccaaa 804 Query: 252 cctttgccgttcaa 265 || ||||||||||| Sbjct: 805 ccattgccgttcaa 818 Score = 40.1 bits (20), Expect = 6.3 Identities = 44/52 (84%) Strand = Plus / Plus Query: 397 atcagaaatgggtgatatggatttgctccttcaacattcccatggccccagg 448 |||| |||||||| || ||||||||||| ||||| || || ||||| ||||| Sbjct: 950 atcaaaaatgggtcatttggatttgctcattcaatataccaatggctccagg 1001
>emb|BX824848.1|CNS0A4QI Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH77ZB11 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1777 Score = 61.9 bits (31), Expect = 2e-06 Identities = 108/134 (80%) Strand = Plus / Plus Query: 132 acggtgacgatccagagggacctcttctatgggtatgacaccttgatggagaacgtctct 191 |||||||| || || ||||| || |||||||| ||||| || | ||||| || || ||| Sbjct: 799 acggtgacaattcaaagggatcttttctatggatatgatactctcatggaaaatgtatct 858 Query: 192 gatccctcgcacatagaatttgctnaccacaaggtcactgggcgaagagatagagccaag 251 ||||| || || ||||| |||||| | |||||||| || || ||||||| |||||||| Sbjct: 859 gatccttcccatatagattttgctcatcacaaggttacaggaagaagagacagagccaaa 918 Query: 252 cctttgccgttcaa 265 || ||||||||||| Sbjct: 919 ccattgccgttcaa 932 Score = 40.1 bits (20), Expect = 6.3 Identities = 44/52 (84%) Strand = Plus / Plus Query: 397 atcagaaatgggtgatatggatttgctccttcaacattcccatggccccagg 448 |||| |||||||| || ||||||||||| ||||| || || ||||| ||||| Sbjct: 1064 atcaaaaatgggtcatttggatttgctcattcaatataccaatggctccagg 1115
>gb|U77347.1|ATU77347 Arabidopsis thaliana lethal leaf-spot 1 homolog (Lls1) mRNA, partial cds Length = 1977 Score = 61.9 bits (31), Expect = 2e-06 Identities = 108/134 (80%) Strand = Plus / Plus Query: 132 acggtgacgatccagagggacctcttctatgggtatgacaccttgatggagaacgtctct 191 |||||||| || || ||||| || |||||||| ||||| || | ||||| || || ||| Sbjct: 950 acggtgacaattcaaagggatcttttctatggatatgatactctcatggaaaatgtatct 1009 Query: 192 gatccctcgcacatagaatttgctnaccacaaggtcactgggcgaagagatagagccaag 251 ||||| || || ||||| |||||| | |||||||| || || ||||||| |||||||| Sbjct: 1010 gatccttcccatatagattttgctcatcacaaggttacaggaagaagagacagagccaaa 1069 Query: 252 cctttgccgttcaa 265 || ||||||||||| Sbjct: 1070 ccattgccgttcaa 1083 Score = 40.1 bits (20), Expect = 6.3 Identities = 44/52 (84%) Strand = Plus / Plus Query: 397 atcagaaatgggtgatatggatttgctccttcaacattcccatggccccagg 448 |||| |||||||| || ||||||||||| ||||| || || ||||| ||||| Sbjct: 1215 atcaaaaatgggtcatttggatttgctcattcaatataccaatggctccagg 1266
>emb|BX825426.1|CNS0A525 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL36ZD05 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1035 Score = 56.0 bits (28), Expect = 1e-04 Identities = 96/119 (80%) Strand = Plus / Plus Query: 147 agggacctcttctatgggtatgacaccttgatggagaacgtctctgatccctcgcacata 206 ||||| || |||||||| ||||| || | ||||| || || |||||||| || || ||| Sbjct: 12 agggatcttttctatggatatgatactctcatggaaaatgtatctgatccttcccatata 71 Query: 207 gaatttgctnaccacaaggtcactgggcgaagagatagagccaagcctttgccgttcaa 265 || |||||| | |||||||| || || ||||||| |||||||| || ||||||||||| Sbjct: 72 gattttgctcatcacaaggttacaggaagaagagacagagccaaaccattgccgttcaa 130 Score = 40.1 bits (20), Expect = 6.3 Identities = 44/52 (84%) Strand = Plus / Plus Query: 397 atcagaaatgggtgatatggatttgctccttcaacattcccatggccccagg 448 |||| |||||||| || ||||||||||| ||||| || || ||||| ||||| Sbjct: 262 atcaaaaatgggtcatttggatttgctcattcaatataccaatggctccagg 313
>gb|AY344063.1| Zea mays lethal leaf-spot 1 (lls1) mRNA, partial cds Length = 618 Score = 50.1 bits (25), Expect = 0.006 Identities = 52/60 (86%), Gaps = 1/60 (1%) Strand = Plus / Plus Query: 11 ttccccacgctcctctcccagggncctgctcttcgtctggcccgacgagaacggctggga 70 |||||||| ||| |||||||||| | |||||||||| |||||||| ||||| || ||||| Sbjct: 548 ttccccaccctcgtctcccaggggc-tgctcttcgtgtggcccgatgagaatgggtggga 606
>gb|CP000225.1| Drosophila melanogaster genomic scaffold 211000022280724 Length = 820587 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 361 agatagagatcgacactaaatt 382 |||||||||||||||||||||| Sbjct: 397766 agatagagatcgacactaaatt 397787
>gb|AY835930.1| Codonopsis lanceolata heat shock protein 18 (HSP18) mRNA, complete cds Length = 767 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 8 aacttccccacgctcctctcc 28 ||||||||||||||||||||| Sbjct: 396 aacttccccacgctcctctcc 376
>emb|CR956422.6| Pig DNA sequence from clone PigE-93N11 on chromosome 6, complete sequence Length = 184430 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 143 ccagagggacctcttctatgggtatgaca 171 ||||| |||||||||||||||| |||||| Sbjct: 174847 ccagatggacctcttctatgggcatgaca 174819
>emb|AL445467.6| Human DNA sequence from clone RP11-311M14 on chromosome X Contains the 5' end of the CTPS2 gene for CTP synthase II, the CALB3 gene for calbindin 3 (vitamin D-dependent calcium binding protein), the SYAP1 gene for synapse associated protein 1 SAP47 homolog (Drosophila) and two CpG islands, complete sequence Length = 166336 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 427 tcaacattcccatggccccag 447 ||||||||||||||||||||| Sbjct: 38045 tcaacattcccatggccccag 38065
>dbj|AB243013.1| Codonopsis lanceolata mRNA for heat shock protein 18, complete cds Length = 781 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 8 aacttccccacgctcctctcc 28 ||||||||||||||||||||| Sbjct: 388 aacttccccacgctcctctcc 368
>gb|DQ273270.1| Allium cepa clone 1G-12-89, complete sequence Length = 107859 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 415 ggatttgctccttcaacattc 435 ||||||||||||||||||||| Sbjct: 40887 ggatttgctccttcaacattc 40867
>ref|NM_117586.2| Arabidopsis thaliana unknown protein AT4G14990 mRNA, complete cds Length = 3304 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 119 cccggccttctccacggtga 138 |||||||||||||||||||| Sbjct: 1102 cccggccttctccacggtga 1121
>gb|CP000127.1| Nitrosococcus oceani ATCC 19707, complete genome Length = 3481691 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 75 gccaaggcgaccaaacctcc 94 |||||||||||||||||||| Sbjct: 1623391 gccaaggcgaccaaacctcc 1623410
>ref|XM_818325.1| Trypanosoma brucei TREU927 hypothetical protein (Tb10.389.1610) partial mRNA Length = 2352 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 107 agagttcgatgacccggcct 126 |||||||||||||||||||| Sbjct: 1860 agagttcgatgacccggcct 1841
>gb|AC126007.16| Medicago truncatula clone mth2-11o4, complete sequence Length = 106747 Score = 40.1 bits (20), Expect = 6.3 Identities = 29/32 (90%) Strand = Plus / Plus Query: 399 cagaaatgggtgatatggatttgctccttcaa 430 ||||||||||| |||||||| || |||||||| Sbjct: 25500 cagaaatgggtaatatggatatgttccttcaa 25531
>emb|Z97337.2|ATFCA2 Arabidopsis thaliana DNA chromosome 4, ESSA I FCA contig fragment No. 2 Length = 202860 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 119 cccggccttctccacggtga 138 |||||||||||||||||||| Sbjct: 132891 cccggccttctccacggtga 132872
>gb|AY035039.1| Arabidopsis thaliana unknown protein (At4g14990) mRNA, complete cds Length = 3299 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 119 cccggccttctccacggtga 138 |||||||||||||||||||| Sbjct: 1102 cccggccttctccacggtga 1121
>emb|AL391254.2|ATF28D10 Arabidopsis thaliana DNA chromosome 3, BAC clone F28D10 Length = 49890 Score = 40.1 bits (20), Expect = 6.3 Identities = 44/52 (84%) Strand = Plus / Plus Query: 397 atcagaaatgggtgatatggatttgctccttcaacattcccatggccccagg 448 |||| |||||||| || ||||||||||| ||||| || || ||||| ||||| Sbjct: 25980 atcaaaaatgggtcatttggatttgctcattcaatataccaatggctccagg 26031
>dbj|AB227926.1| Aspergillus oryzae cDNA, contig sequence: AoEST4799 Length = 652 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 2 gccaccaacttccccacgctcctc 25 |||||||| ||||||||||||||| Sbjct: 480 gccaccaatttccccacgctcctc 457
>dbj|AP007162.1| Aspergillus oryzae RIB40 genomic DNA, SC102 Length = 1779707 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 2 gccaccaacttccccacgctcctc 25 |||||||| ||||||||||||||| Sbjct: 1418815 gccaccaatttccccacgctcctc 1418792
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 62 cggctgggacaaggccaagg 81 |||||||||||||||||||| Sbjct: 2593184 cggctgggacaaggccaagg 2593165
>emb|AL161540.2|ATCHRIV40 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 40 Length = 197405 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 119 cccggccttctccacggtga 138 |||||||||||||||||||| Sbjct: 78345 cccggccttctccacggtga 78326 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,087,644 Number of Sequences: 3902068 Number of extensions: 3087644 Number of successful extensions: 47678 Number of sequences better than 10.0: 35 Number of HSP's better than 10.0 without gapping: 34 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 47539 Number of HSP's gapped (non-prelim): 138 length of query: 464 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 442 effective length of database: 17,147,199,772 effective search space: 7579062299224 effective search space used: 7579062299224 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)