ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal25b11 |
|---|---|
| Clone Library Name | barley_pub |
>GALE_MOUSE (Q8R059) UDP-glucose 4-epimerase (EC 5.1.3.2) (Galactowaldenase)| (UDP-galactose 4-epimerase) Length = 347 Score = 31.2 bits (69), Expect = 0.69 Identities = 19/59 (32%), Positives = 33/59 (55%), Gaps = 6/59 (10%) Frame = -2 Query: 175 SLTMNVTLLQWLRQHWVRRVVYPSSESK------VPLWRFNKAHPPGGEASVLGRKLYF 17 +LT + LL+ +R H V+ +V+ SS + +PL ++AHP GG + G+ +F Sbjct: 107 NLTGTIQLLEIMRAHGVKNLVFSSSATVYGNPQYLPL---DEAHPTGGCTNPYGKSKFF 162
>AKR1_SCHPO (Q09701) Palmitoyltransferase akr1 (EC 2.3.1.-) (Ankyrin| repeat-containing protein akr1) Length = 642 Score = 30.8 bits (68), Expect = 0.90 Identities = 13/37 (35%), Positives = 20/37 (54%) Frame = -3 Query: 111 IHPVRARYHCGALTRRIPQGERRVSWAGSCISMYGNR 1 + P R+ YHCGA R I + + W G+C+ +R Sbjct: 408 VKPPRS-YHCGACKRCINRYDHHCPWTGNCVGARNHR 443
>ZDH16_MOUSE (Q9ESG8) Probable palmitoyltransferase ZDHHC16 (EC 2.3.1.-) (Zinc| finger DHHC domain-containing protein 16) (DHHC-16) (Abl-philin 2) Length = 361 Score = 30.0 bits (66), Expect = 1.5 Identities = 12/39 (30%), Positives = 20/39 (51%), Gaps = 1/39 (2%) Frame = -3 Query: 114 CIHPVRAR-YHCGALTRRIPQGERRVSWAGSCISMYGNR 1 CI+P AR +HC R + + + W +C+ Y +R Sbjct: 160 CIYPKPARTHHCSICNRCVLKMDHHCPWLNNCVGHYNHR 198
>ZDH16_MACFA (Q4R7E2) Probable palmitoyltransferase ZDHHC16 (EC 2.3.1.-) (Zinc| finger DHHC domain-containing protein 16) (DHHC-16) Length = 377 Score = 30.0 bits (66), Expect = 1.5 Identities = 12/39 (30%), Positives = 20/39 (51%), Gaps = 1/39 (2%) Frame = -3 Query: 114 CIHPVRAR-YHCGALTRRIPQGERRVSWAGSCISMYGNR 1 CI+P AR +HC R + + + W +C+ Y +R Sbjct: 160 CIYPKPARTHHCSICNRCVLKMDHHCPWLNNCVGHYNHR 198
>ZDH16_HUMAN (Q969W1) Probable palmitoyltransferase ZDHHC16 (EC 2.3.1.-) (Zinc| finger DHHC domain-containing protein 16) (DHHC-16) Length = 377 Score = 30.0 bits (66), Expect = 1.5 Identities = 12/39 (30%), Positives = 20/39 (51%), Gaps = 1/39 (2%) Frame = -3 Query: 114 CIHPVRAR-YHCGALTRRIPQGERRVSWAGSCISMYGNR 1 CI+P AR +HC R + + + W +C+ Y +R Sbjct: 160 CIYPKPARTHHCSICNRCVLKMDHHCPWLNNCVGHYNHR 198
>GALE_HUMAN (Q14376) UDP-glucose 4-epimerase (EC 5.1.3.2) (Galactowaldenase)| (UDP-galactose 4-epimerase) Length = 348 Score = 30.0 bits (66), Expect = 1.5 Identities = 18/59 (30%), Positives = 33/59 (55%), Gaps = 6/59 (10%) Frame = -2 Query: 175 SLTMNVTLLQWLRQHWVRRVVYPSSESK------VPLWRFNKAHPPGGEASVLGRKLYF 17 +LT + LL+ ++ H V+ +V+ SS + +PL ++AHP GG + G+ +F Sbjct: 108 NLTGTIQLLEIMKAHGVKNLVFSSSATVYGNPQYLPL---DEAHPTGGCTNPYGKSKFF 163
>ZDH16_BOVIN (Q58CU4) Probable palmitoyltransferase ZDHHC16 (EC 2.3.1.-) (Zinc| finger DHHC domain-containing protein 16) (DHHC-16) Length = 377 Score = 29.6 bits (65), Expect = 2.0 Identities = 12/39 (30%), Positives = 20/39 (51%), Gaps = 1/39 (2%) Frame = -3 Query: 114 CIHPVRAR-YHCGALTRRIPQGERRVSWAGSCISMYGNR 1 CI+P AR +HC R + + + W +C+ Y +R Sbjct: 160 CINPKPARTHHCSICNRCVLKMDHHCPWLNNCVGHYNHR 198
>ACVS_EMENI (P27742) N-(5-amino-5-carboxypentanoyl)-L-cysteinyl-D-valine synthase| (EC 6.3.2.26) (Delta-(L-alpha-aminoadipyl)-L-cysteinyl-D-valine synthetase) (ACV synthetase) (ACVS) Length = 3770 Score = 29.6 bits (65), Expect = 2.0 Identities = 14/36 (38%), Positives = 19/36 (52%) Frame = +1 Query: 88 VPCSHWMDTLRVEPNVAAATGAMLHSLLSFLWDPTL 195 VP + W+ LR +A G LHS+L F+W L Sbjct: 1177 VPDASWLSKLR---QTCSAQGITLHSILQFVWHAVL 1209
>ZDH17_MOUSE (Q80TN5) Palmitoyltransferase ZDHHC17 (EC 2.3.1.-) (Zinc finger| DHHC domain-containing protein 17) (DHHC-17) (Huntingtin-interacting protein 14) Length = 632 Score = 29.3 bits (64), Expect = 2.6 Identities = 12/35 (34%), Positives = 19/35 (54%) Frame = -3 Query: 105 PVRARYHCGALTRRIPQGERRVSWAGSCISMYGNR 1 PVR++ HCG R I + + W G+C+ +R Sbjct: 447 PVRSK-HCGVCNRCIAKFDHHCPWVGNCVGAGNHR 480
>ZDH17_HUMAN (Q8IUH5) Palmitoyltransferase ZDHHC17 (EC 2.3.1.-) (Zinc finger| DHHC domain-containing protein 17) (DHHC-17) (Huntingtin-interacting protein 14) (Huntingtin-interacting protein 3) (Huntingtin-interacting protein HYPH) (Putative NF-kappa-B-act Length = 632 Score = 29.3 bits (64), Expect = 2.6 Identities = 12/35 (34%), Positives = 19/35 (54%) Frame = -3 Query: 105 PVRARYHCGALTRRIPQGERRVSWAGSCISMYGNR 1 PVR++ HCG R I + + W G+C+ +R Sbjct: 447 PVRSK-HCGVCNRCIAKFDHHCPWVGNCVGAGNHR 480
>PFA4_ASPFU (Q4WC37) Palmitoyltransferase pfa4 (EC 2.3.1.-) (Protein fatty| acyltransferase 4) Length = 402 Score = 28.9 bits (63), Expect = 3.4 Identities = 20/74 (27%), Positives = 28/74 (37%) Frame = -3 Query: 231 CPVQHGLGRNIKQSWIPQEA*Q*M*HCSSGCGNIGFDA*CIHPVRARYHCGALTRRIPQG 52 C V G I + W P Q C+ G P RA +HC R IP+ Sbjct: 62 CTVDPG---RIPKDWTPPNLKQLEKDCAGGRQRWCRRCEAFKPPRA-HHCKTCQRCIPKM 117 Query: 51 ERRVSWAGSCISMY 10 + W +C+S + Sbjct: 118 DHHCPWTSNCVSHF 131
>PFA4_NEUCR (Q7SCY6) Palmitoyltransferase PFA4 (EC 2.3.1.-) (Protein fatty| acyltransferase 4) Length = 486 Score = 28.9 bits (63), Expect = 3.4 Identities = 12/31 (38%), Positives = 18/31 (58%) Frame = -3 Query: 105 PVRARYHCGALTRRIPQGERRVSWAGSCISM 13 P RA +HC R IP+ + W G+C+S+ Sbjct: 112 PPRA-HHCRHCARCIPRMDHHCPWTGNCVSL 141
>PURL_PROAC (Q6A6C0) Phosphoribosylformylglycinamidine synthase II (EC 6.3.5.3)| (FGAM synthase II) Length = 750 Score = 28.5 bits (62), Expect = 4.5 Identities = 13/37 (35%), Positives = 20/37 (54%) Frame = -3 Query: 312 VYGHPCSQPSSGTFQRNV*DVPXELPLCPVQHGLGRN 202 ++ CS SS + R D+P + PL P+ G+G N Sbjct: 50 MWSEHCSYKSSKKYLRRFGDLPQQTPLGPLLAGIGDN 86
>OTUD3_HUMAN (Q5T2D3) OTU domain-containing protein 3| Length = 398 Score = 28.5 bits (62), Expect = 4.5 Identities = 14/46 (30%), Positives = 24/46 (52%) Frame = -2 Query: 214 PWEKH*AELDPTGSLTMNVTLLQWLRQHWVRRVVYPSSESKVPLWR 77 P+EKH A L G+ N ++ + R H + V++ + PLW+ Sbjct: 119 PFEKHVASLAKPGTFAGNDAIVAFARNHQLNVVIH---QLNAPLWQ 161
>DPO3A_CHLTR (O84549) DNA polymerase III alpha subunit (EC 2.7.7.7)| Length = 1237 Score = 28.5 bits (62), Expect = 4.5 Identities = 17/45 (37%), Positives = 22/45 (48%) Frame = +1 Query: 109 DTLRVEPNVAAATGAMLHSLLSFLWDPTLLNVSPKAVLNRAEREL 243 DT E AA SL S DP + VSP+ V+ R+ +EL Sbjct: 944 DTFSREKKEAATGVLTFFSLDSMARDPVKITVSPENVIQRSPKEL 988
>DPO3A_CHLMU (Q9PJJ7) DNA polymerase III alpha subunit (EC 2.7.7.7)| Length = 1237 Score = 28.5 bits (62), Expect = 4.5 Identities = 15/45 (33%), Positives = 23/45 (51%) Frame = +1 Query: 109 DTLRVEPNVAAATGAMLHSLLSFLWDPTLLNVSPKAVLNRAEREL 243 DT E AA SL S DP + +SP+ ++ R+++EL Sbjct: 944 DTFSREKKEAATGVLTFFSLNSMTKDPVKVTISPENIVRRSDKEL 988
>VGLY_LASSG (P17332) Glycoprotein polyprotein [Contains: Glycoprotein G1;| Glycoprotein G2] Length = 490 Score = 28.1 bits (61), Expect = 5.8 Identities = 13/34 (38%), Positives = 18/34 (52%) Frame = -3 Query: 102 VRARYHCGALTRRIPQGERRVSWAGSCISMYGNR 1 V A HCG L + Q R++W GS I++ R Sbjct: 173 VDAAGHCGTLANGVLQTFMRMAWGGSYIALDSGR 206
>SPT6H_DROME (Q9W420) Transcription elongation factor SPT6| Length = 1831 Score = 28.1 bits (61), Expect = 5.8 Identities = 11/34 (32%), Positives = 18/34 (52%) Frame = -2 Query: 157 TLLQWLRQHWVRRVVYPSSESKVPLWRFNKAHPP 56 +LL+W ++HW+ P+S S L + PP Sbjct: 1515 SLLRWFKEHWLDPTATPASASASNLTPLHLMRPP 1548
>BIM1_YEAST (P40013) Protein BIM1| Length = 344 Score = 27.7 bits (60), Expect = 7.6 Identities = 8/14 (57%), Positives = 12/14 (85%) Frame = -2 Query: 163 NVTLLQWLRQHWVR 122 N+ LQWL++HW+R Sbjct: 95 NLEFLQWLKKHWIR 108
>CUTA_MOUSE (Q9CQ89) Protein CutA precursor (Brain acetylcholinesterase| putative membrane anchor) Length = 177 Score = 27.7 bits (60), Expect = 7.6 Identities = 16/32 (50%), Positives = 19/32 (59%) Frame = +1 Query: 127 PNVAAATGAMLHSLLSFLWDPTLLNVSPKAVL 222 P V GA L LLSFLW P LL V+ + +L Sbjct: 7 PGVLLGGGATL--LLSFLWMPALLPVASRLLL 36
>GNIH_COTJA (Q9DGD4) Gonadotropin inhibitory hormone precursor [Contains:| Gonadotropin inhibitory hormone (GnIH); Gonadotropin inhibitory hormone-related peptide 1 (GnIH-RP1); Gonadotropin inhibitory hormone-related peptide 2 (GnIH-RP2)] Length = 173 Score = 27.7 bits (60), Expect = 7.6 Identities = 18/57 (31%), Positives = 32/57 (56%) Frame = -1 Query: 236 LSARFNTALGETLSRVGSHRKLNNECNIAPVAAATLGSTRSVSIQ*EQGTTVAL*QG 66 L RF A GE+LSR + L+N +P+A +++ S ++S + + ++L QG Sbjct: 111 LPLRFGRAFGESLSRRAPN--LSNRSGRSPLARSSIQSLLNLSQRFGKSVPISLSQG 165
>POL_BLVAU (P25059) Pol polyprotein [Contains: Reverse| transcriptase/ribonuclease H (EC 2.7.7.49) (EC 3.1.26.4) (RT); Integrase (IN)] Length = 852 Score = 27.7 bits (60), Expect = 7.6 Identities = 12/31 (38%), Positives = 16/31 (51%) Frame = +2 Query: 5 FPYMEIQLPAQDTRLSPWGMRLVKAPQWYLA 97 FP Q P D + SPWG+ L+ Q+ A Sbjct: 327 FPLAYFQTPLTDNQASPWGLLLLLGCQYLQA 357
>VIOB_CHRVO (Q9S3V0) Violacein biosynthesis protein vioB| Length = 998 Score = 27.7 bits (60), Expect = 7.6 Identities = 10/21 (47%), Positives = 14/21 (66%) Frame = -2 Query: 187 DPTGSLTMNVTLLQWLRQHWV 125 +P GSLT++ L +W Q WV Sbjct: 378 EPRGSLTLSSELAEWREQDWV 398
>UL81_HCMVA (P16825) Hypothetical protein UL81| Length = 116 Score = 27.3 bits (59), Expect = 9.9 Identities = 16/50 (32%), Positives = 20/50 (40%) Frame = +1 Query: 31 CPRHSPLPLGDAPC*SATVVPCSHWMDTLRVEPNVAAATGAMLHSLLSFL 180 CPRH P P P +P H +D E + + HSL FL Sbjct: 34 CPRHDPHPSAPLP------LPAPHAVDPASRERLLCFSPACFSHSLYLFL 77
>POL_BLVJ (P03361) Pol polyprotein [Contains: Reverse| transcriptase/ribonuclease H (EC 2.7.7.49) (EC 3.1.26.4) (RT); Integrase (IN)] Length = 852 Score = 27.3 bits (59), Expect = 9.9 Identities = 11/28 (39%), Positives = 15/28 (53%) Frame = +2 Query: 5 FPYMEIQLPAQDTRLSPWGMRLVKAPQW 88 FP Q P D + SPWG+ L+ Q+ Sbjct: 327 FPLAYFQTPLTDNQASPWGLLLLLGCQY 354 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 52,179,777 Number of Sequences: 219361 Number of extensions: 1050311 Number of successful extensions: 2820 Number of sequences better than 10.0: 25 Number of HSP's better than 10.0 without gapping: 2754 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2820 length of database: 80,573,946 effective HSP length: 80 effective length of database: 63,025,066 effective search space used: 1512601584 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
