>gb|AC124144.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBb0099P06, complete sequence
          Length = 135117

 Score = 85.7 bits (43), Expect = 9e-14
 Identities = 75/85 (88%), Gaps = 3/85 (3%)
 Strand = Plus / Plus

                                                                         
Query: 77    taggtcattgtagagcatctcccttcacaaggttaccgaggagtgcctgctacgcgtcca 136
             |||||||||||||||||||| ||| | ||||||  |||||||| ||||||||||||   |
Sbjct: 52503 taggtcattgtagagcatcttcctccgcaaggtctccgaggagggcctgctacgcg---a 52559

                                      
Query: 137   ccaccatgggagacgagacctccac 161
             |||||||||| ||||||||||||||
Sbjct: 52560 ccaccatgggggacgagacctccac 52584

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 85.7 bits (43), Expect = 9e-14
 Identities = 75/85 (88%), Gaps = 3/85 (3%)
 Strand = Plus / Plus

                                                                           
Query: 77      taggtcattgtagagcatctcccttcacaaggttaccgaggagtgcctgctacgcgtcca 136
               |||||||||||||||||||| ||| | ||||||  |||||||| ||||||||||||   |
Sbjct: 3630156 taggtcattgtagagcatcttcctccgcaaggtctccgaggagggcctgctacgcg---a 3630212

                                        
Query: 137     ccaccatgggagacgagacctccac 161
               |||||||||| ||||||||||||||
Sbjct: 3630213 ccaccatgggggacgagacctccac 3630237

>dbj|AK066161.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013052F22, full
           insert sequence
          Length = 2136

 Score = 81.8 bits (41), Expect = 1e-12
 Identities = 73/83 (87%), Gaps = 3/83 (3%)
 Strand = Plus / Plus

                                                                       
Query: 79  ggtcattgtagagcatctcccttcacaaggttaccgaggagtgcctgctacgcgtccacc 138
           |||||||||||||||||| ||| | ||||||  |||||||| ||||||||||||   |||
Sbjct: 114 ggtcattgtagagcatcttcctccgcaaggtctccgaggagggcctgctacgcg---acc 170

                                  
Query: 139 accatgggagacgagacctccac 161
           |||||||| ||||||||||||||
Sbjct: 171 accatgggggacgagacctccac 193



 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 66/77 (85%)
 Strand = Plus / Plus

                                                                       
Query: 274 gaagtggatgtagaaccgatagttgaagtttgcacggnaaaatntggtgactaccantgc 333
           |||||||| || || || || |||||||| ||||| | ||| | |||||||||||| |||
Sbjct: 297 gaagtggaagtcgatcctatggttgaagtctgcacagcaaagtttggtgactaccagtgc 356

                            
Query: 334 aacaatgcaatgggatt 350
           |||||||||||||||||
Sbjct: 357 aacaatgcaatgggatt 373

>ref|XM_475642.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1821

 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 66/77 (85%)
 Strand = Plus / Plus

                                                                       
Query: 274 gaagtggatgtagaaccgatagttgaagtttgcacggnaaaatntggtgactaccantgc 333
           |||||||| || || || || |||||||| ||||| | ||| | |||||||||||| |||
Sbjct: 124 gaagtggaagtcgatcctatggttgaagtctgcacagcaaagtttggtgactaccagtgc 183

                            
Query: 334 aacaatgcaatgggatt 350
           |||||||||||||||||
Sbjct: 184 aacaatgcaatgggatt 200

>gb|AY103885.1| Zea mays PCO145718 mRNA sequence
          Length = 1503

 Score = 48.1 bits (24), Expect = 0.019
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 36  ctcctcctcgtctccgcccgccgc 59
           ||||||||||||||||||||||||
Sbjct: 329 ctcctcctcgtctccgcccgccgc 352

>gb|AC097382.3| Homo sapiens BAC clone RP11-367J11 from 4, complete sequence
          Length = 210515

 Score = 44.1 bits (22), Expect = 0.30
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 157    tccacttctgcctcaggctcgg 178
              ||||||||||||||||||||||
Sbjct: 201470 tccacttctgcctcaggctcgg 201449

>ref|XM_509080.1| PREDICTED: Pan troglodytes similar to keratin 1; Keratin-1;
           cytokeratin 1; hair alpha protein (LOC451920), mRNA
          Length = 1676

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 219 tgtcaagcagcagatctccaacttg 243
           ||||||| |||||||||||||||||
Sbjct: 440 tgtcaagaagcagatctccaacttg 464

>gb|BC028294.1| Homo sapiens mRNA similar to keratin 1 (epidermolytic hyperkeratosis)
            (cDNA clone IMAGE:4779138)
          Length = 3114

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 219  tgtcaagcagcagatctccaacttg 243
            ||||||| |||||||||||||||||
Sbjct: 1913 tgtcaagaagcagatctccaacttg 1937

>ref|NM_006121.2| Homo sapiens keratin 1 (epidermolytic hyperkeratosis) (KRT1), mRNA
          Length = 2507

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 219  tgtcaagcagcagatctccaacttg 243
            ||||||| |||||||||||||||||
Sbjct: 1289 tgtcaagaagcagatctccaacttg 1313

>gb|BC063697.1| Homo sapiens keratin 1 (epidermolytic hyperkeratosis), mRNA (cDNA
            clone MGC:75449 IMAGE:4746001), complete cds
          Length = 2470

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 219  tgtcaagcagcagatctccaacttg 243
            ||||||| |||||||||||||||||
Sbjct: 1283 tgtcaagaagcagatctccaacttg 1307

>gb|M10938.1|HUMKTEP2A Human epidermal 67-kDa type II keratin mRNA
          Length = 1924

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 219 tgtcaagcagcagatctccaacttg 243
           ||||||| |||||||||||||||||
Sbjct: 789 tgtcaagaagcagatctccaacttg 813

>emb|AL939123.1|SCO939123 Streptomyces coelicolor A3(2) complete genome; segment 20/29
          Length = 300100

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 41     cctcgtctccgcccgccgcg 60
              ||||||||||||||||||||
Sbjct: 133359 cctcgtctccgcccgccgcg 133378

>gb|BC070893.1| Rattus norvegicus SH3-domain GRB2-like 1, mRNA (cDNA clone
          MGC:91401 IMAGE:7099223), complete cds
          Length = 2035

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 12 gtggcggcgcctacccccgc 31
          ||||||||||||||||||||
Sbjct: 39 gtggcggcgcctacccccgc 58

>ref|NM_031239.2| Rattus norvegicus SH3-domain GRB2-like 1 (Sh3gl1), mRNA
          Length = 2010

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 12 gtggcggcgcctacccccgc 31
          ||||||||||||||||||||
Sbjct: 43 gtggcggcgcctacccccgc 62

>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 36       ctcctcctcgtctccgcccgccgc 59
                |||||||||||||||| |||||||
Sbjct: 22746937 ctcctcctcgtctccggccgccgc 22746914

>gb|AC011246.6| Homo sapiens BAC clone RP11-498O20 from 2, complete sequence
          Length = 220183

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 134   ccaccaccatgggagacgag 153
             ||||||||||||||||||||
Sbjct: 59257 ccaccaccatgggagacgag 59276

>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 50      cgcccgccgcgctgctccgc 69
               ||||||||||||||||||||
Sbjct: 2059514 cgcccgccgcgctgctccgc 2059533

>ref|XM_215524.3| PREDICTED: Rattus norvegicus tumor protein D52 (predicted)
          (Tpd52_predicted), mRNA
          Length = 695

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                  
Query: 47 ctccgcccgccgcgctgctccgcg 70
          |||||||||||||||| |||||||
Sbjct: 44 ctccgcccgccgcgctcctccgcg 21

>dbj|AK104114.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-202-H10,
          full insert sequence
          Length = 962

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 36 ctcctcctcgtctccgcccgccgc 59
          |||||||||||||||| |||||||
Sbjct: 32 ctcctcctcgtctccggccgccgc 55

>dbj|AK101325.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033034F22,
          full insert sequence
          Length = 949

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 36 ctcctcctcgtctccgcccgccgc 59
          |||||||||||||||| |||||||
Sbjct: 29 ctcctcctcgtctccggccgccgc 52

>dbj|AK060041.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-304-C08,
          full insert sequence
          Length = 985

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 36 ctcctcctcgtctccgcccgccgc 59
          |||||||||||||||| |||||||
Sbjct: 54 ctcctcctcgtctccggccgccgc 77

>emb|AL954180.6| Zebrafish DNA sequence from clone CH211-222A10, complete sequence
          Length = 225504

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 229   cagatctccaacttggtggctctgtcac 256
             ||||||||||| |||||| |||||||||
Sbjct: 72491 cagatctccaatttggtgcctctgtcac 72464

>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 36       ctcctcctcgtctccgcccgccgc 59
                |||||||||||||||| |||||||
Sbjct: 22675128 ctcctcctcgtctccggccgccgc 22675105

>emb|AL928745.3|CNS08CBI Oryza sativa chromosome 12, . BAC OSJNBb0092G12 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 131603

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 36    ctcctcctcgtctccgcccgccgc 59
             |||||||||||||||| |||||||
Sbjct: 58787 ctcctcctcgtctccggccgccgc 58764

>gb|AF009602.1|AF009602 Rattus norvegicus SH3p8 mRNA, complete cds
          Length = 1546

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 12 gtggcggcgcctacccccgc 31
          ||||||||||||||||||||
Sbjct: 28 gtggcggcgcctacccccgc 47

>dbj|AB008161.1| Rattus norvegicus mRNA for SH3P8, complete cds
          Length = 2010

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 12 gtggcggcgcctacccccgc 31
          ||||||||||||||||||||
Sbjct: 43 gtggcggcgcctacccccgc 62


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,289,758
Number of Sequences: 3902068
Number of extensions: 2289758
Number of successful extensions: 43534
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 43265
Number of HSP's gapped (non-prelim): 266
length of query: 354
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 332
effective length of database: 17,147,199,772
effective search space: 5692870324304
effective search space used: 5692870324304
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)