| Clone Name | baal23p08 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_186373.2| Oryza sativa (japonica cultivar-group), mRNA Length = 2599 Score = 394 bits (199), Expect = e-106 Identities = 405/473 (85%), Gaps = 3/473 (0%) Strand = Plus / Plus Query: 42 cactttgcgccgcctcctgggtcaccatctgccatgaacaacggcggagctgcttctgcg 101 |||||||| ||||| |||| |||||||||||| || ||| || ||||||||| ||||| Sbjct: 1357 cactttgcaccgccgcctgtgtcaccatctgctgggagcaatggaggagctgctgctgcg 1416 Query: 102 cattggcttcaaggtagcaggctgcgttcttctttcaacgcaagagatgcgacagttgaa 161 |||||||| ||||| || |||||||||||||||||||| ||||| ||||| | ||||| Sbjct: 1417 cattggctccaaggcagtaggctgcgttcttctttcaatgcaagggatgctgctgttgat 1476 Query: 162 gaccttggcttgctcctcgactgggaatcacagtaccttggggcactctgcctcccaccc 221 ||||||||| |||||||||| ||||||||||| |||||||||||||||||||| |||||| Sbjct: 1477 gaccttggcatgctcctcgaatgggaatcacaataccttggggcactctgcctgccaccc 1536 Query: 222 agcagccgtccccagccccgtctttccactggccttagcatcaggcctacagcaattgtc 281 |||||||| ||||| || || ||||| |||| || || |||||||| ||| |||| Sbjct: 1537 agcagccgcccccaaccacgcctttcagctggtctgagtatcaggccaaca---attgct 1593 Query: 282 cccaccagtcttgaagatatgtatgcttcagagatgggaatgtcaccgaggttcaccaat 341 || ||| ||||||||| |||||||||||||| |||| |||||| ||||||||| | ||| Sbjct: 1594 ccatccaatcttgaagacatgtatgcttcagacatggcaatgtctccgaggttccctaat 1653 Query: 342 gatcaaggtcactcagcctactcaccagcccacaaatcagccatccttaacaagcttcat 401 || ||||||||||||| ||||||||||||||||||||||||| |||| |||||||||||| Sbjct: 1654 gaccaaggtcactcagtctactcaccagcccacaaatcagccctcctcaacaagcttcat 1713 Query: 402 cagcagaagggtctcctctcacctgtcaacaccaacagaatgtactcaccaagggctctt 461 || |||||||| ||| | |||||||| |||||||||||||||||||| |||||||||||| Sbjct: 1714 caacagaagggcctcttatcacctgttaacaccaacagaatgtactccccaagggctctt 1773 Query: 462 gatccggcagcgctcgtccagtctccaattggtggcatgtctcctcgatcccc 514 |||||| || | | | || |||||| |||||||||||||||| || ||||| Sbjct: 1774 gatccgtcatctttggcacattctccatttggtggcatgtctccccggtcccc 1826
>ref|XM_506415.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1092_A07.129 mRNA Length = 2674 Score = 394 bits (199), Expect = e-106 Identities = 405/473 (85%), Gaps = 3/473 (0%) Strand = Plus / Plus Query: 42 cactttgcgccgcctcctgggtcaccatctgccatgaacaacggcggagctgcttctgcg 101 |||||||| ||||| |||| |||||||||||| || ||| || ||||||||| ||||| Sbjct: 1369 cactttgcaccgccgcctgtgtcaccatctgctgggagcaatggaggagctgctgctgcg 1428 Query: 102 cattggcttcaaggtagcaggctgcgttcttctttcaacgcaagagatgcgacagttgaa 161 |||||||| ||||| || |||||||||||||||||||| ||||| ||||| | ||||| Sbjct: 1429 cattggctccaaggcagtaggctgcgttcttctttcaatgcaagggatgctgctgttgat 1488 Query: 162 gaccttggcttgctcctcgactgggaatcacagtaccttggggcactctgcctcccaccc 221 ||||||||| |||||||||| ||||||||||| |||||||||||||||||||| |||||| Sbjct: 1489 gaccttggcatgctcctcgaatgggaatcacaataccttggggcactctgcctgccaccc 1548 Query: 222 agcagccgtccccagccccgtctttccactggccttagcatcaggcctacagcaattgtc 281 |||||||| ||||| || || ||||| |||| || || |||||||| ||| |||| Sbjct: 1549 agcagccgcccccaaccacgcctttcagctggtctgagtatcaggccaaca---attgct 1605 Query: 282 cccaccagtcttgaagatatgtatgcttcagagatgggaatgtcaccgaggttcaccaat 341 || ||| ||||||||| |||||||||||||| |||| |||||| ||||||||| | ||| Sbjct: 1606 ccatccaatcttgaagacatgtatgcttcagacatggcaatgtctccgaggttccctaat 1665 Query: 342 gatcaaggtcactcagcctactcaccagcccacaaatcagccatccttaacaagcttcat 401 || ||||||||||||| ||||||||||||||||||||||||| |||| |||||||||||| Sbjct: 1666 gaccaaggtcactcagtctactcaccagcccacaaatcagccctcctcaacaagcttcat 1725 Query: 402 cagcagaagggtctcctctcacctgtcaacaccaacagaatgtactcaccaagggctctt 461 || |||||||| ||| | |||||||| |||||||||||||||||||| |||||||||||| Sbjct: 1726 caacagaagggcctcttatcacctgttaacaccaacagaatgtactccccaagggctctt 1785 Query: 462 gatccggcagcgctcgtccagtctccaattggtggcatgtctcctcgatcccc 514 |||||| || | | | || |||||| |||||||||||||||| || ||||| Sbjct: 1786 gatccgtcatctttggcacattctccatttggtggcatgtctccccggtcccc 1838
>emb|AJ575241.1|OSA575241 Oryza sativa (japonica cultivar-group) partial mRNA for ZF protein Length = 800 Score = 394 bits (199), Expect = e-106 Identities = 405/473 (85%), Gaps = 3/473 (0%) Strand = Plus / Plus Query: 42 cactttgcgccgcctcctgggtcaccatctgccatgaacaacggcggagctgcttctgcg 101 |||||||| ||||| |||| |||||||||||| || ||| || ||||||||| ||||| Sbjct: 13 cactttgcaccgccgcctgtgtcaccatctgctgggagcaatggaggagctgctgctgcg 72 Query: 102 cattggcttcaaggtagcaggctgcgttcttctttcaacgcaagagatgcgacagttgaa 161 |||||||| ||||| || |||||||||||||||||||| ||||| ||||| | ||||| Sbjct: 73 cattggctccaaggcagtaggctgcgttcttctttcaatgcaagggatgctgctgttgat 132 Query: 162 gaccttggcttgctcctcgactgggaatcacagtaccttggggcactctgcctcccaccc 221 ||||||||| |||||||||| ||||||||||| |||||||||||||||||||| |||||| Sbjct: 133 gaccttggcatgctcctcgaatgggaatcacaataccttggggcactctgcctgccaccc 192 Query: 222 agcagccgtccccagccccgtctttccactggccttagcatcaggcctacagcaattgtc 281 |||||||| ||||| || || ||||| |||| || || |||||||| ||| |||| Sbjct: 193 agcagccgcccccaaccacgcctttcagctggtctgagtatcaggccaaca---attgct 249 Query: 282 cccaccagtcttgaagatatgtatgcttcagagatgggaatgtcaccgaggttcaccaat 341 || ||| ||||||||| |||||||||||||| |||| |||||| ||||||||| | ||| Sbjct: 250 ccatccaatcttgaagacatgtatgcttcagacatggcaatgtctccgaggttccctaat 309 Query: 342 gatcaaggtcactcagcctactcaccagcccacaaatcagccatccttaacaagcttcat 401 || ||||||||||||| ||||||||||||||||||||||||| |||| |||||||||||| Sbjct: 310 gaccaaggtcactcagtctactcaccagcccacaaatcagccctcctcaacaagcttcat 369 Query: 402 cagcagaagggtctcctctcacctgtcaacaccaacagaatgtactcaccaagggctctt 461 || |||||||| ||| | |||||||| |||||||||||||||||||| |||||||||||| Sbjct: 370 caacagaagggcctcttatcacctgttaacaccaacagaatgtactccccaagggctctt 429 Query: 462 gatccggcagcgctcgtccagtctccaattggtggcatgtctcctcgatcccc 514 |||||| || | | | || |||||| |||||||||||||||| || ||||| Sbjct: 430 gatccgtcatctttggcacattctccatttggtggcatgtctccccggtcccc 482
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 394 bits (199), Expect = e-106 Identities = 405/473 (85%), Gaps = 3/473 (0%) Strand = Plus / Plus Query: 42 cactttgcgccgcctcctgggtcaccatctgccatgaacaacggcggagctgcttctgcg 101 |||||||| ||||| |||| |||||||||||| || ||| || ||||||||| ||||| Sbjct: 22789052 cactttgcaccgccgcctgtgtcaccatctgctgggagcaatggaggagctgctgctgcg 22789111 Query: 102 cattggcttcaaggtagcaggctgcgttcttctttcaacgcaagagatgcgacagttgaa 161 |||||||| ||||| || |||||||||||||||||||| ||||| ||||| | ||||| Sbjct: 22789112 cattggctccaaggcagtaggctgcgttcttctttcaatgcaagggatgctgctgttgat 22789171 Query: 162 gaccttggcttgctcctcgactgggaatcacagtaccttggggcactctgcctcccaccc 221 ||||||||| |||||||||| ||||||||||| |||||||||||||||||||| |||||| Sbjct: 22789172 gaccttggcatgctcctcgaatgggaatcacaataccttggggcactctgcctgccaccc 22789231 Query: 222 agcagccgtccccagccccgtctttccactggccttagcatcaggcctacagcaattgtc 281 |||||||| ||||| || || ||||| |||| || || |||||||| ||| |||| Sbjct: 22789232 agcagccgcccccaaccacgcctttcagctggtctgagtatcaggccaaca---attgct 22789288 Query: 282 cccaccagtcttgaagatatgtatgcttcagagatgggaatgtcaccgaggttcaccaat 341 || ||| ||||||||| |||||||||||||| |||| |||||| ||||||||| | ||| Sbjct: 22789289 ccatccaatcttgaagacatgtatgcttcagacatggcaatgtctccgaggttccctaat 22789348 Query: 342 gatcaaggtcactcagcctactcaccagcccacaaatcagccatccttaacaagcttcat 401 || ||||||||||||| ||||||||||||||||||||||||| |||| |||||||||||| Sbjct: 22789349 gaccaaggtcactcagtctactcaccagcccacaaatcagccctcctcaacaagcttcat 22789408 Query: 402 cagcagaagggtctcctctcacctgtcaacaccaacagaatgtactcaccaagggctctt 461 || |||||||| ||| | |||||||| |||||||||||||||||||| |||||||||||| Sbjct: 22789409 caacagaagggcctcttatcacctgttaacaccaacagaatgtactccccaagggctctt 22789468 Query: 462 gatccggcagcgctcgtccagtctccaattggtggcatgtctcctcgatcccc 514 |||||| || | | | || |||||| |||||||||||||||| || ||||| Sbjct: 22789469 gatccgtcatctttggcacattctccatttggtggcatgtctccccggtcccc 22789521
>dbj|AP003866.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1092_A07 Length = 137081 Score = 394 bits (199), Expect = e-106 Identities = 405/473 (85%), Gaps = 3/473 (0%) Strand = Plus / Plus Query: 42 cactttgcgccgcctcctgggtcaccatctgccatgaacaacggcggagctgcttctgcg 101 |||||||| ||||| |||| |||||||||||| || ||| || ||||||||| ||||| Sbjct: 108394 cactttgcaccgccgcctgtgtcaccatctgctgggagcaatggaggagctgctgctgcg 108453 Query: 102 cattggcttcaaggtagcaggctgcgttcttctttcaacgcaagagatgcgacagttgaa 161 |||||||| ||||| || |||||||||||||||||||| ||||| ||||| | ||||| Sbjct: 108454 cattggctccaaggcagtaggctgcgttcttctttcaatgcaagggatgctgctgttgat 108513 Query: 162 gaccttggcttgctcctcgactgggaatcacagtaccttggggcactctgcctcccaccc 221 ||||||||| |||||||||| ||||||||||| |||||||||||||||||||| |||||| Sbjct: 108514 gaccttggcatgctcctcgaatgggaatcacaataccttggggcactctgcctgccaccc 108573 Query: 222 agcagccgtccccagccccgtctttccactggccttagcatcaggcctacagcaattgtc 281 |||||||| ||||| || || ||||| |||| || || |||||||| ||| |||| Sbjct: 108574 agcagccgcccccaaccacgcctttcagctggtctgagtatcaggccaaca---attgct 108630 Query: 282 cccaccagtcttgaagatatgtatgcttcagagatgggaatgtcaccgaggttcaccaat 341 || ||| ||||||||| |||||||||||||| |||| |||||| ||||||||| | ||| Sbjct: 108631 ccatccaatcttgaagacatgtatgcttcagacatggcaatgtctccgaggttccctaat 108690 Query: 342 gatcaaggtcactcagcctactcaccagcccacaaatcagccatccttaacaagcttcat 401 || ||||||||||||| ||||||||||||||||||||||||| |||| |||||||||||| Sbjct: 108691 gaccaaggtcactcagtctactcaccagcccacaaatcagccctcctcaacaagcttcat 108750 Query: 402 cagcagaagggtctcctctcacctgtcaacaccaacagaatgtactcaccaagggctctt 461 || |||||||| ||| | |||||||| |||||||||||||||||||| |||||||||||| Sbjct: 108751 caacagaagggcctcttatcacctgttaacaccaacagaatgtactccccaagggctctt 108810 Query: 462 gatccggcagcgctcgtccagtctccaattggtggcatgtctcctcgatcccc 514 |||||| || | | | || |||||| |||||||||||||||| || ||||| Sbjct: 108811 gatccgtcatctttggcacattctccatttggtggcatgtctccccggtcccc 108863
>dbj|AK067895.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013123G12, full insert sequence Length = 2676 Score = 387 bits (195), Expect = e-104 Identities = 404/473 (85%), Gaps = 3/473 (0%) Strand = Plus / Plus Query: 42 cactttgcgccgcctcctgggtcaccatctgccatgaacaacggcggagctgcttctgcg 101 |||||||| ||||| |||| |||||||||||| || ||| || ||||||||| ||||| Sbjct: 1370 cactttgcaccgccgcctgtgtcaccatctgctgggagcaatggaggagctgctgctgcg 1429 Query: 102 cattggcttcaaggtagcaggctgcgttcttctttcaacgcaagagatgcgacagttgaa 161 |||||||| ||||| || |||||||||||||||||||| ||||| ||||| | ||||| Sbjct: 1430 cattggctccaaggcagtaggctgcgttcttctttcaatgcaagggatgctgctgttgat 1489 Query: 162 gaccttggcttgctcctcgactgggaatcacagtaccttggggcactctgcctcccaccc 221 ||||||||| |||||||||| ||||||||||| |||||||||||||||||||| |||||| Sbjct: 1490 gaccttggcatgctcctcgaatgggaatcacaataccttggggcactctgcctgccaccc 1549 Query: 222 agcagccgtccccagccccgtctttccactggccttagcatcaggcctacagcaattgtc 281 |||||||| ||||| || || ||||| |||| || || |||||||| ||| |||| Sbjct: 1550 agcagccgcccccaaccacgcctttcagctggtctgagtatcaggccaaca---attgct 1606 Query: 282 cccaccagtcttgaagatatgtatgcttcagagatgggaatgtcaccgaggttcaccaat 341 || ||| ||||||||| |||||||||||||| |||| |||||| ||||||||| | ||| Sbjct: 1607 ccatccaatcttgaagacatgtatgcttcagacatggcaatgtctccgaggttccctaat 1666 Query: 342 gatcaaggtcactcagcctactcaccagcccacaaatcagccatccttaacaagcttcat 401 || ||||||||||||| ||||||||||||||||||||||||| | || |||||||||||| Sbjct: 1667 gaccaaggtcactcagtctactcaccagcccacaaatcagccctactcaacaagcttcat 1726 Query: 402 cagcagaagggtctcctctcacctgtcaacaccaacagaatgtactcaccaagggctctt 461 || |||||||| ||| | |||||||| |||||||||||||||||||| |||||||||||| Sbjct: 1727 caacagaagggcctcttatcacctgttaacaccaacagaatgtactccccaagggctctt 1786 Query: 462 gatccggcagcgctcgtccagtctccaattggtggcatgtctcctcgatcccc 514 |||||| || | | | || |||||| |||||||||||||||| || ||||| Sbjct: 1787 gatccgtcatctttggcacattctccatttggtggcatgtctccccggtcccc 1839
>dbj|AK067784.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013116A14, full insert sequence Length = 2599 Score = 387 bits (195), Expect = e-104 Identities = 404/473 (85%), Gaps = 3/473 (0%) Strand = Plus / Plus Query: 42 cactttgcgccgcctcctgggtcaccatctgccatgaacaacggcggagctgcttctgcg 101 |||||||| ||||| |||| |||||||||||| || ||| || ||||||||| ||||| Sbjct: 1357 cactttgcaccgccgcctgtgtcaccatctgctgggagcaatggaggagctgctgctgcg 1416 Query: 102 cattggcttcaaggtagcaggctgcgttcttctttcaacgcaagagatgcgacagttgaa 161 |||||||| ||||| || |||||||||||||||||||| ||||| ||||| | ||||| Sbjct: 1417 cattggctccaaggcagtaggctgcgttcttctttcaatgcaagggatgctgctgttgat 1476 Query: 162 gaccttggcttgctcctcgactgggaatcacagtaccttggggcactctgcctcccaccc 221 |||||||| |||||||||| ||||||||||| |||||||||||||||||||| |||||| Sbjct: 1477 gaccttggtatgctcctcgaatgggaatcacaataccttggggcactctgcctgccaccc 1536 Query: 222 agcagccgtccccagccccgtctttccactggccttagcatcaggcctacagcaattgtc 281 |||||||| ||||| || || ||||| |||| || || |||||||| ||| |||| Sbjct: 1537 agcagccgcccccaaccacgcctttcagctggtctgagtatcaggccaaca---attgct 1593 Query: 282 cccaccagtcttgaagatatgtatgcttcagagatgggaatgtcaccgaggttcaccaat 341 || ||| ||||||||| |||||||||||||| |||| |||||| ||||||||| | ||| Sbjct: 1594 ccatccaatcttgaagacatgtatgcttcagacatggcaatgtctccgaggttccctaat 1653 Query: 342 gatcaaggtcactcagcctactcaccagcccacaaatcagccatccttaacaagcttcat 401 || ||||||||||||| ||||||||||||||||||||||||| |||| |||||||||||| Sbjct: 1654 gaccaaggtcactcagtctactcaccagcccacaaatcagccctcctcaacaagcttcat 1713 Query: 402 cagcagaagggtctcctctcacctgtcaacaccaacagaatgtactcaccaagggctctt 461 || |||||||| ||| | |||||||| |||||||||||||||||||| |||||||||||| Sbjct: 1714 caacagaagggcctcttatcacctgttaacaccaacagaatgtactccccaagggctctt 1773 Query: 462 gatccggcagcgctcgtccagtctccaattggtggcatgtctcctcgatcccc 514 |||||| || | | | || |||||| |||||||||||||||| || ||||| Sbjct: 1774 gatccgtcatctttggcacattctccatttggtggcatgtctccccggtcccc 1826
>gb|BT019091.1| Zea mays clone Contig689.F mRNA sequence Length = 1121 Score = 149 bits (75), Expect = 1e-32 Identities = 282/350 (80%), Gaps = 12/350 (3%) Strand = Plus / Plus Query: 294 gaagatatgtatgcttcagagatgggaatgtcaccgaggttcaccaatgatcaaggtcac 353 ||||| |||||||||||||| |||| ||||| || |||||||||||||| ||||||||| Sbjct: 32 gaagagatgtatgcttcagacatggctatgtcgccaaggttcaccaatgaccaaggtcac 91 Query: 354 tcagcctactcaccagcccacaaatcagccatccttaacaag---cttcatcagcagaag 410 |||| || ||||||||| ||||||||||| | || |||||| | |||||| |||||| Sbjct: 92 tcagtcttctcaccagcacacaaatcagctcttctaaacaagtttcatcatcaacagaag 151 Query: 411 ggtctcctctcacctgtcaacaccaacagaatgtactcaccaagggctcttgatccggca 470 || || | || |||||||| |||||||| |||||||||||||||| ||||||| || Sbjct: 152 ggccttttgtcgcctgtcaataccaacaggatgtactcaccaaggggccttgatc---ca 208 Query: 471 gcgctcgtccagtctccaattggtggcatgtctcctcgatcccctcggctcatggagcca 530 | | |||| |||||| ||||||||||||||||||| ||||||||| ||||||| | Sbjct: 209 tcaattatccattctccatttggtggcatgtctcctcggtcccctcggactatggagcta 268 Query: 531 acatcgcccataaatgccc------gttttggagccgctgtcacgcagcgtgagatgtat 584 ||||| ||| ||| || || || ||||||| ||||| || | |||||| |||| Sbjct: 269 acatctcccctaagtgtccgtgttggtgttggagctgctgttactccgcgtgatatgttg 328 Query: 585 gagcagttctctaacctgaacaagcaccagctgccatcggtgggttcgcc 634 || ||||| ||| |||||||||||||||| ||||||| ||||| ||||| Sbjct: 329 gatcagttttcttccctgaacaagcaccaggtgccatctgtgggatcgcc 378
>gb|AC156802.7| Mus musculus BAC clone RP23-119P9 from chromosome 13, complete sequence Length = 209975 Score = 48.1 bits (24), Expect = 0.035 Identities = 30/32 (93%) Strand = Plus / Minus Query: 120 aggctgcgttcttctttcaacgcaagagatgc 151 |||||||||||||||||||| | ||||||||| Sbjct: 189827 aggctgcgttcttctttcaaggaaagagatgc 189796
>gb|AC121942.2| Mus musculus chromosome 13 clone RP24-211D12, complete sequence Length = 164932 Score = 48.1 bits (24), Expect = 0.035 Identities = 30/32 (93%) Strand = Plus / Plus Query: 120 aggctgcgttcttctttcaacgcaagagatgc 151 |||||||||||||||||||| | ||||||||| Sbjct: 141648 aggctgcgttcttctttcaaggaaagagatgc 141679
>gb|AC124545.4| Mus musculus BAC clone RP23-272D9 from 7, complete sequence Length = 169442 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Minus Query: 349 gtcactcagcctactcaccagc 370 |||||||||||||||||||||| Sbjct: 132060 gtcactcagcctactcaccagc 132039
>gb|AC127339.3| Mus musculus BAC clone RP23-180G16 from chromosome 5, complete sequence Length = 225376 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 207 ctctgcctcccacccagcagc 227 ||||||||||||||||||||| Sbjct: 153057 ctctgcctcccacccagcagc 153037
>emb|CT027991.8| Mouse DNA sequence from clone RP23-418N2 on chromosome 16, complete sequence Length = 186296 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 206 actctgcctcccacccagcag 226 ||||||||||||||||||||| Sbjct: 141267 actctgcctcccacccagcag 141287
>emb|AL606977.28| Mouse DNA sequence from clone RP23-284L6 on chromosome 4, complete sequence Length = 199429 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 208 tctgcctcccacccagcagcc 228 ||||||||||||||||||||| Sbjct: 74456 tctgcctcccacccagcagcc 74476
>gb|AC107757.15| Mus musculus chromosome 15, clone RP23-207L14, complete sequence Length = 208483 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 400 atcagcagaagggtctcctc 419 |||||||||||||||||||| Sbjct: 64559 atcagcagaagggtctcctc 64578
>gb|AC158162.13| Mus musculus chromosome 3, clone RP23-335E20, complete sequence Length = 206835 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 gtgccgctgctgcacttggg 20 |||||||||||||||||||| Sbjct: 178435 gtgccgctgctgcacttggg 178454
>gb|AF045449.1| Homo sapiens chromosome 21q22.3 cosmid Q2N7, complete sequence Length = 32613 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 351 cactcagcctactcaccagc 370 |||||||||||||||||||| Sbjct: 25266 cactcagcctactcaccagc 25247
>ref|XM_429734.1| PREDICTED: Gallus gallus LOC420108 (LOC420108), mRNA Length = 938 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 227 ccgtccccagccccgtcttt 246 |||||||||||||||||||| Sbjct: 258 ccgtccccagccccgtcttt 239
>gb|AC121885.3| Mus musculus BAC clone RP24-138N20 from chromosome 3, complete sequence Length = 155690 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 gtgccgctgctgcacttggg 20 |||||||||||||||||||| Sbjct: 133220 gtgccgctgctgcacttggg 133201
>emb|AL163281.2|HS21C081 Homo sapiens chromosome 21 segment HS21C081 Length = 340000 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 351 cactcagcctactcaccagc 370 |||||||||||||||||||| Sbjct: 160253 cactcagcctactcaccagc 160234
>emb|AJ784856.1| Vibrio cholerae oadG-2 gene, oadA-2 gene and oadB-2 gene Length = 3408 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 95 ttctgcgcattggcttcaag 114 |||||||||||||||||||| Sbjct: 3314 ttctgcgcattggcttcaag 3295
>gb|AF064862.2| Homo sapiens chromosome 21 clone PAC 31P10 map 21q22.3, complete sequence Length = 145861 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 351 cactcagcctactcaccagc 370 |||||||||||||||||||| Sbjct: 6091 cactcagcctactcaccagc 6072
>dbj|BA000011.4| Thermoplasma volcanium GSS1 DNA, complete genome Length = 1584804 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 agctgcttctgcgcattggc 108 |||||||||||||||||||| Sbjct: 550324 agctgcttctgcgcattggc 550305
>gb|AF031134.1|AF031134 Petromyzon marinus serum albumin-like protein (AS) mRNA, partial cds Length = 2055 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 500 gtctcctcgatcccctcggc 519 |||||||||||||||||||| Sbjct: 90 gtctcctcgatcccctcggc 109
>gb|AC015720.20| Homo sapiens chromosome 15, clone RP11-151H2, complete sequence Length = 174559 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 208 tctgcctcccacccagcagc 227 |||||||||||||||||||| Sbjct: 123785 tctgcctcccacccagcagc 123766 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,386,594 Number of Sequences: 3902068 Number of extensions: 5386594 Number of successful extensions: 85059 Number of sequences better than 10.0: 25 Number of HSP's better than 10.0 without gapping: 25 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 84984 Number of HSP's gapped (non-prelim): 75 length of query: 634 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 611 effective length of database: 17,143,297,704 effective search space: 10474554897144 effective search space used: 10474554897144 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)