ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal23o17 |
|---|---|
| Clone Library Name | barley_pub |
>emb|X51608.1|TAPRKGEN Triticum aestivum RNA for phosphoribulokinase Length = 1533 Score = 1144 bits (577), Expect = 0.0 Identities = 619/633 (97%) Strand = Plus / Plus Query: 5 aacatggcattctgcagcccacacaccaccacatccctgcgctccccatgcaccaccatc 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 62 aacatggcattctgcagcccacacaccaccacatccctgcgctccccatgcaccaccatc 121 Query: 65 ccaaactcaggcttcaggcagaaccaagtcatcctcttcacaaccagaagcagcaggagg 124 ||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||| Sbjct: 122 ccaaactcaggcttcaggcagaaccaagtcatcttcttcacgaccagaagcagcaggagg 181 Query: 125 agtaccacgaggcatggagcaaggaccttccaggtctcatgcgcagttgagaagccaata 184 |||| |||||||||||| ||||||||||||||||||||||||||||||||| |||||||| Sbjct: 182 agtaacacgaggcatggggcaaggaccttccaggtctcatgcgcagttgagcagccaata 241 Query: 185 gtgattggcctggcagcagactcgggatgtgggaaatccaccttcatgcgccggctcacc 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 242 gtgattggcctggcagcagactcgggatgtgggaaatccaccttcatgcgccggctcacc 301 Query: 245 agcgtgtttggaggtgctgcagagccacccaagggcggcaacccagactcgaacacgctc 304 ||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||| Sbjct: 302 agcgtgtttggaggtgccgcagagccacccaagggcggcaacccagactccaacacgctc 361 Query: 305 atcagcgacacgacgacggtcatatgccttgatgactaccattccttggacagaaccggg 364 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 362 atcagcgacacgacgacggtcatatgccttgatgactaccattccttggacagaaccggg 421 Query: 365 aggaaggagaaaggtgtgactgccctggaccccaaggcaaacgactttgatctcatgtat 424 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 422 aggaaggagaaaggtgtgaccgccctggaccccaaggcaaacgactttgatctcatgtat 481 Query: 425 gagcaagtgaaggcaatcaaagaaggcaaggctattgagaagccaatctacaaccacgtc 484 ||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 482 gagcaggtgaaggcaatcaaggaaggcaaggctattgagaagccaatctacaaccacgtc 541 Query: 485 actggcctcctcgacccggcggagctcatccagccccccaagatcttcgtcatcgagggt 544 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 542 actggcctcctcgacccggcggagctcatccagccccccaagatcttcgtcatcgagggt 601 Query: 545 ttgcacccaatgtatgacgaacgtgtgagagacctccttgacttcagcatctacttagac 604 |||||||||||||| || |||||||||||||| |||||||| |||||||||||||||||| Sbjct: 602 ttgcacccaatgtacgatgaacgtgtgagagagctccttgatttcagcatctacttagac 661 Query: 605 atcagcaatgaggttaagttcgcatggaaaatt 637 ||||||||||||||||||||||||||||||||| Sbjct: 662 atcagcaatgaggttaagttcgcatggaaaatt 694
>emb|X57952.1|TAPRK T.aestivum PRK gene for ribulose-5-phosphate kinase Length = 2501 Score = 1017 bits (513), Expect = 0.0 Identities = 543/553 (98%) Strand = Plus / Plus Query: 5 aacatggcattctgcagcccacacaccaccacatccctgcgctccccatgcaccaccatc 64 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 221 aacatggcattctgcagcccacacagcaccacatccctgcgctccccatgcaccaccatc 280 Query: 65 ccaaactcaggcttcaggcagaaccaagtcatcctcttcacaaccagaagcagcaggagg 124 |||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 281 ccaaactctggcttcaggcagaaccaagtcatcctcttcacgaccagaagcagcaggagg 340 Query: 125 agtaccacgaggcatggagcaaggaccttccaggtctcatgcgcagttgagaagccaata 184 |||| |||||||||||| ||||||||||||||||||||||||||||||||| |||||||| Sbjct: 341 agtaacacgaggcatggggcaaggaccttccaggtctcatgcgcagttgagcagccaata 400 Query: 185 gtgattggcctggcagcagactcgggatgtgggaaatccaccttcatgcgccggctcacc 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 401 gtgattggcctggcagcagactcgggatgtgggaaatccaccttcatgcgccggctcacc 460 Query: 245 agcgtgtttggaggtgctgcagagccacccaagggcggcaacccagactcgaacacgctc 304 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 461 agcgtgtttggaggtgctgcagagccacccaagggcggcaacccagactccaacacgctc 520 Query: 305 atcagcgacacgacgacggtcatatgccttgatgactaccattccttggacagaaccggg 364 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 521 atcagcgacacgacgacggtcatatgccttgatgactaccattccttggacagaaccggg 580 Query: 365 aggaaggagaaaggtgtgactgccctggaccccaaggcaaacgactttgatctcatgtat 424 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 581 aggaaggagaaaggtgtgaccgccctggaccccaaggcaaacgactttgatctcatgtat 640 Query: 425 gagcaagtgaaggcaatcaaagaaggcaaggctattgagaagccaatctacaaccacgtc 484 ||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 641 gagcaggtgaaggcaatcaaggaaggcaaggctattgagaagccaatctacaaccacgtc 700 Query: 485 actggcctcctcgacccggcggagctcatccagccccccaagatcttcgtcatcgagggt 544 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 701 actggcctcctcgacccggcggagctcatccagccccccaagatcttcgtcatcgagggt 760 Query: 545 ttgcacccaatgt 557 ||||||||||||| Sbjct: 761 ttgcacccaatgt 773 Score = 133 bits (67), Expect = 8e-28 Identities = 73/75 (97%) Strand = Plus / Plus Query: 563 gaacgtgtgagagacctccttgacttcagcatctacttagacatcagcaatgaggttaag 622 |||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 1036 gaacgtgtgagagagctccttgatttcagcatctacttagacatcagcaatgaggttaag 1095 Query: 623 ttcgcatggaaaatt 637 ||||||||||||||| Sbjct: 1096 ttcgcatggaaaatt 1110
>gb|AF529237.2| Oryza sativa (indica cultivar-group) phosphoribulokinase precursor mRNA, complete cds; nuclear gene for chloroplast product Length = 1663 Score = 583 bits (294), Expect = e-163 Identities = 532/611 (87%), Gaps = 9/611 (1%) Strand = Plus / Plus Query: 30 ccaccacatccctgcgctccccatgcaccaccatcccaaactcaggcttcaggcagaacc 89 ||||||| ||||||| ||||||||||||||||| | ||| ||||||||||||||| Sbjct: 188 ccaccacctccctgcactccccatgcaccaccaacacaa------gcttcaggcagaacc 241 Query: 90 aagtcatcctcttcacaaccagaagcagcaggaggagtaccacgaggca---tggagcaa 146 | |||||| ||||||| |||||||||| ||||||| ||| ||| ||| | ||||||| Sbjct: 242 aggtcatcttcttcaccaccagaagcaacaggaggggtagcacaaggtacggaggagcaa 301 Query: 147 ggaccttccaggtctcatgcgcagttgagaagccaatagtgattggcctggcagcagact 206 | ||||| ||||| |||||| |||| || |||||| | ||||||||||| |||||||||| Sbjct: 302 gaacctttcaggtttcatgctcagtcgacaagccagtggtgattggccttgcagcagact 361 Query: 207 cgggatgtgggaaatccaccttcatgcgccggctcaccagcgtgtttggaggtgctgcag 266 | ||||| ||||| |||||||||||||||||||||||| |||||||| |||||||||| Sbjct: 362 caggatgcgggaagagcaccttcatgcgccggctcaccagtgtgtttggtggtgctgcag 421 Query: 267 agccacccaagggcggcaacccagactcgaacacgctcatcagcgacacgacgacggtca 326 ||||||||||||| |||||||||||||| ||||| |||||||| |||||||| ||||| | Sbjct: 422 agccacccaagggtggcaacccagactcaaacacactcatcagtgacacgacaacggtga 481 Query: 327 tatgccttgatgactaccattccttggacagaaccgggaggaaggagaaaggtgtgactg 386 ||||||| ||||||||||||||||||||||| || || |||||||||||||||||||||| Sbjct: 482 tatgcctcgatgactaccattccttggacaggactggcaggaaggagaaaggtgtgactg 541 Query: 387 ccctggaccccaaggcaaacgactttgatctcatgtatgagcaagtgaaggcaatcaaag 446 |||||||||| | ||||||||| |||||||||||||||||||| |||||||||||||||| Sbjct: 542 ccctggaccctagggcaaacgattttgatctcatgtatgagcaggtgaaggcaatcaaag 601 Query: 447 aaggcaaggctattgagaagccaatctacaaccacgtcactggcctcctcgacccggcgg 506 |||||||||| ||||||||||||||||||||||| || ||||| ||||| ||||| ||| Sbjct: 602 aaggcaaggcaattgagaagccaatctacaaccatgttactggtctcctagacccaccgg 661 Query: 507 agctcatccagccccccaagatcttcgtcatcgagggtttgcacccaatgtatgacgaac 566 |||| ||||||||||||||||| || ||||| ||||| || || || |||| ||| |||| Sbjct: 662 agcttatccagccccccaagatttttgtcattgagggcttacatcccatgtttgatgaac 721 Query: 567 gtgtgagagacctccttgacttcagcatctacttagacatcagcaatgaggttaagttcg 626 ||||||| |||||||| || |||||||||||| | |||||||| | |||||||| || | Sbjct: 722 gtgtgagggacctcctagatttcagcatctacctggacatcagtgacgaggttaaatttg 781 Query: 627 catggaaaatt 637 ||||||||||| Sbjct: 782 catggaaaatt 792
>ref|XM_467296.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1494 Score = 567 bits (286), Expect = e-158 Identities = 530/611 (86%), Gaps = 9/611 (1%) Strand = Plus / Plus Query: 30 ccaccacatccctgcgctccccatgcaccaccatcccaaactcaggcttcaggcagaacc 89 ||||||| ||||||| ||||||||||||||||| | ||| ||||||||||||| | Sbjct: 42 ccaccacctccctgcactccccatgcaccaccaacacaa------gcttcaggcagaatc 95 Query: 90 aagtcatcctcttcacaaccagaagcagcaggaggagtaccacgaggca---tggagcaa 146 | |||||| ||||||| |||||||||| ||||||| ||| ||| ||| | ||||||| Sbjct: 96 aggtcatcttcttcaccaccagaagcaacaggaggggtagcacaaggtacggaggagcaa 155 Query: 147 ggaccttccaggtctcatgcgcagttgagaagccaatagtgattggcctggcagcagact 206 | ||||| ||||| |||||| |||| || |||||| | ||||||||||| |||||||||| Sbjct: 156 gaacctttcaggtttcatgctcagtcgacaagccagtggtgattggccttgcagcagact 215 Query: 207 cgggatgtgggaaatccaccttcatgcgccggctcaccagcgtgtttggaggtgctgcag 266 | ||||| ||||| |||||| ||||||||||||||||| |||||||| |||||||||| Sbjct: 216 caggatgcgggaagagcacctttatgcgccggctcaccagtgtgtttggtggtgctgcag 275 Query: 267 agccacccaagggcggcaacccagactcgaacacgctcatcagcgacacgacgacggtca 326 ||||||||||||| |||||||||||||| ||||| |||||||| |||||||| ||||| | Sbjct: 276 agccacccaagggtggcaacccagactcaaacacactcatcagtgacacgacaacggtga 335 Query: 327 tatgccttgatgactaccattccttggacagaaccgggaggaaggagaaaggtgtgactg 386 ||||||| ||||||||||||||||||||||| || || |||||||||||||||||||||| Sbjct: 336 tatgcctcgatgactaccattccttggacaggactggcaggaaggagaaaggtgtgactg 395 Query: 387 ccctggaccccaaggcaaacgactttgatctcatgtatgagcaagtgaaggcaatcaaag 446 |||||||||| | ||||||||| |||||||||||||||||||| |||||||||||||||| Sbjct: 396 ccctggaccctagggcaaacgattttgatctcatgtatgagcaggtgaaggcaatcaaag 455 Query: 447 aaggcaaggctattgagaagccaatctacaaccacgtcactggcctcctcgacccggcgg 506 |||||||||| ||||||||||||||||||||||| || ||||| ||||| ||||| ||| Sbjct: 456 aaggcaaggcaattgagaagccaatctacaaccatgttactggtctcctagacccaccgg 515 Query: 507 agctcatccagccccccaagatcttcgtcatcgagggtttgcacccaatgtatgacgaac 566 |||| ||||||||||||||||| || ||||| ||||| || || || |||| ||| |||| Sbjct: 516 agcttatccagccccccaagatttttgtcattgagggcttacatcccatgtttgatgaac 575 Query: 567 gtgtgagagacctccttgacttcagcatctacttagacatcagcaatgaggttaagttcg 626 ||||||| |||||||| || |||||||||||| | |||||||| | |||||||| || | Sbjct: 576 gtgtgagggacctcctagatttcagcatctacctggacatcagtgacgaggttaaatttg 635 Query: 627 catggaaaatt 637 ||||||||||| Sbjct: 636 catggaaaatt 646
>ref|XM_507520.1| PREDICTED Oryza sativa (japonica cultivar-group), P0459B01.11 mRNA Length = 1556 Score = 567 bits (286), Expect = e-158 Identities = 530/611 (86%), Gaps = 9/611 (1%) Strand = Plus / Plus Query: 30 ccaccacatccctgcgctccccatgcaccaccatcccaaactcaggcttcaggcagaacc 89 ||||||| ||||||| ||||||||||||||||| | ||| ||||||||||||| | Sbjct: 84 ccaccacctccctgcactccccatgcaccaccaacacaa------gcttcaggcagaatc 137 Query: 90 aagtcatcctcttcacaaccagaagcagcaggaggagtaccacgaggca---tggagcaa 146 | |||||| ||||||| |||||||||| ||||||| ||| ||| ||| | ||||||| Sbjct: 138 aggtcatcttcttcaccaccagaagcaacaggaggggtagcacaaggtacggaggagcaa 197 Query: 147 ggaccttccaggtctcatgcgcagttgagaagccaatagtgattggcctggcagcagact 206 | ||||| ||||| |||||| |||| || |||||| | ||||||||||| |||||||||| Sbjct: 198 gaacctttcaggtttcatgctcagtcgacaagccagtggtgattggccttgcagcagact 257 Query: 207 cgggatgtgggaaatccaccttcatgcgccggctcaccagcgtgtttggaggtgctgcag 266 | ||||| ||||| |||||| ||||||||||||||||| |||||||| |||||||||| Sbjct: 258 caggatgcgggaagagcacctttatgcgccggctcaccagtgtgtttggtggtgctgcag 317 Query: 267 agccacccaagggcggcaacccagactcgaacacgctcatcagcgacacgacgacggtca 326 ||||||||||||| |||||||||||||| ||||| |||||||| |||||||| ||||| | Sbjct: 318 agccacccaagggtggcaacccagactcaaacacactcatcagtgacacgacaacggtga 377 Query: 327 tatgccttgatgactaccattccttggacagaaccgggaggaaggagaaaggtgtgactg 386 ||||||| ||||||||||||||||||||||| || || |||||||||||||||||||||| Sbjct: 378 tatgcctcgatgactaccattccttggacaggactggcaggaaggagaaaggtgtgactg 437 Query: 387 ccctggaccccaaggcaaacgactttgatctcatgtatgagcaagtgaaggcaatcaaag 446 |||||||||| | ||||||||| |||||||||||||||||||| |||||||||||||||| Sbjct: 438 ccctggaccctagggcaaacgattttgatctcatgtatgagcaggtgaaggcaatcaaag 497 Query: 447 aaggcaaggctattgagaagccaatctacaaccacgtcactggcctcctcgacccggcgg 506 |||||||||| ||||||||||||||||||||||| || ||||| ||||| ||||| ||| Sbjct: 498 aaggcaaggcaattgagaagccaatctacaaccatgttactggtctcctagacccaccgg 557 Query: 507 agctcatccagccccccaagatcttcgtcatcgagggtttgcacccaatgtatgacgaac 566 |||| ||||||||||||||||| || ||||| ||||| || || || |||| ||| |||| Sbjct: 558 agcttatccagccccccaagatttttgtcattgagggcttacatcccatgtttgatgaac 617 Query: 567 gtgtgagagacctccttgacttcagcatctacttagacatcagcaatgaggttaagttcg 626 ||||||| |||||||| || |||||||||||| | |||||||| | |||||||| || | Sbjct: 618 gtgtgagggacctcctagatttcagcatctacctggacatcagtgacgaggttaaatttg 677 Query: 627 catggaaaatt 637 ||||||||||| Sbjct: 678 catggaaaatt 688
>ref|XM_506922.2| PREDICTED Oryza sativa (japonica cultivar-group), P0459B01.11 mRNA Length = 1626 Score = 567 bits (286), Expect = e-158 Identities = 530/611 (86%), Gaps = 9/611 (1%) Strand = Plus / Plus Query: 30 ccaccacatccctgcgctccccatgcaccaccatcccaaactcaggcttcaggcagaacc 89 ||||||| ||||||| ||||||||||||||||| | ||| ||||||||||||| | Sbjct: 176 ccaccacctccctgcactccccatgcaccaccaacacaa------gcttcaggcagaatc 229 Query: 90 aagtcatcctcttcacaaccagaagcagcaggaggagtaccacgaggca---tggagcaa 146 | |||||| ||||||| |||||||||| ||||||| ||| ||| ||| | ||||||| Sbjct: 230 aggtcatcttcttcaccaccagaagcaacaggaggggtagcacaaggtacggaggagcaa 289 Query: 147 ggaccttccaggtctcatgcgcagttgagaagccaatagtgattggcctggcagcagact 206 | ||||| ||||| |||||| |||| || |||||| | ||||||||||| |||||||||| Sbjct: 290 gaacctttcaggtttcatgctcagtcgacaagccagtggtgattggccttgcagcagact 349 Query: 207 cgggatgtgggaaatccaccttcatgcgccggctcaccagcgtgtttggaggtgctgcag 266 | ||||| ||||| |||||| ||||||||||||||||| |||||||| |||||||||| Sbjct: 350 caggatgcgggaagagcacctttatgcgccggctcaccagtgtgtttggtggtgctgcag 409 Query: 267 agccacccaagggcggcaacccagactcgaacacgctcatcagcgacacgacgacggtca 326 ||||||||||||| |||||||||||||| ||||| |||||||| |||||||| ||||| | Sbjct: 410 agccacccaagggtggcaacccagactcaaacacactcatcagtgacacgacaacggtga 469 Query: 327 tatgccttgatgactaccattccttggacagaaccgggaggaaggagaaaggtgtgactg 386 ||||||| ||||||||||||||||||||||| || || |||||||||||||||||||||| Sbjct: 470 tatgcctcgatgactaccattccttggacaggactggcaggaaggagaaaggtgtgactg 529 Query: 387 ccctggaccccaaggcaaacgactttgatctcatgtatgagcaagtgaaggcaatcaaag 446 |||||||||| | ||||||||| |||||||||||||||||||| |||||||||||||||| Sbjct: 530 ccctggaccctagggcaaacgattttgatctcatgtatgagcaggtgaaggcaatcaaag 589 Query: 447 aaggcaaggctattgagaagccaatctacaaccacgtcactggcctcctcgacccggcgg 506 |||||||||| ||||||||||||||||||||||| || ||||| ||||| ||||| ||| Sbjct: 590 aaggcaaggcaattgagaagccaatctacaaccatgttactggtctcctagacccaccgg 649 Query: 507 agctcatccagccccccaagatcttcgtcatcgagggtttgcacccaatgtatgacgaac 566 |||| ||||||||||||||||| || ||||| ||||| || || || |||| ||| |||| Sbjct: 650 agcttatccagccccccaagatttttgtcattgagggcttacatcccatgtttgatgaac 709 Query: 567 gtgtgagagacctccttgacttcagcatctacttagacatcagcaatgaggttaagttcg 626 ||||||| |||||||| || |||||||||||| | |||||||| | |||||||| || | Sbjct: 710 gtgtgagggacctcctagatttcagcatctacctggacatcagtgacgaggttaaatttg 769 Query: 627 catggaaaatt 637 ||||||||||| Sbjct: 770 catggaaaatt 780
>dbj|AK104857.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-043-C08, full insert sequence Length = 1494 Score = 567 bits (286), Expect = e-158 Identities = 530/611 (86%), Gaps = 9/611 (1%) Strand = Plus / Plus Query: 30 ccaccacatccctgcgctccccatgcaccaccatcccaaactcaggcttcaggcagaacc 89 ||||||| ||||||| ||||||||||||||||| | ||| ||||||||||||| | Sbjct: 42 ccaccacctccctgcactccccatgcaccaccaacacaa------gcttcaggcagaatc 95 Query: 90 aagtcatcctcttcacaaccagaagcagcaggaggagtaccacgaggca---tggagcaa 146 | |||||| ||||||| |||||||||| ||||||| ||| ||| ||| | ||||||| Sbjct: 96 aggtcatcttcttcaccaccagaagcaacaggaggggtagcacaaggtacggaggagcaa 155 Query: 147 ggaccttccaggtctcatgcgcagttgagaagccaatagtgattggcctggcagcagact 206 | ||||| ||||| |||||| |||| || |||||| | ||||||||||| |||||||||| Sbjct: 156 gaacctttcaggtttcatgctcagtcgacaagccagtggtgattggccttgcagcagact 215 Query: 207 cgggatgtgggaaatccaccttcatgcgccggctcaccagcgtgtttggaggtgctgcag 266 | ||||| ||||| |||||| ||||||||||||||||| |||||||| |||||||||| Sbjct: 216 caggatgcgggaagagcacctttatgcgccggctcaccagtgtgtttggcggtgctgcag 275 Query: 267 agccacccaagggcggcaacccagactcgaacacgctcatcagcgacacgacgacggtca 326 ||||||||||||| |||||||||||||| ||||| |||||||| |||||||| ||||| | Sbjct: 276 agccacccaagggtggcaacccagactcaaacacactcatcagtgacacgacaacggtga 335 Query: 327 tatgccttgatgactaccattccttggacagaaccgggaggaaggagaaaggtgtgactg 386 ||||||| ||||||||||||||||||||||| || || |||||||||||||||||||||| Sbjct: 336 tatgcctcgatgactaccattccttggacaggactggcaggaaggagaaaggtgtgactg 395 Query: 387 ccctggaccccaaggcaaacgactttgatctcatgtatgagcaagtgaaggcaatcaaag 446 |||||||||| | ||||||||| |||||||||||||||||||| |||||||||||||||| Sbjct: 396 ccctggaccctagggcaaacgattttgatctcatgtatgagcaggtgaaggcaatcaaag 455 Query: 447 aaggcaaggctattgagaagccaatctacaaccacgtcactggcctcctcgacccggcgg 506 |||||||||| ||||||||||||||||||||||| || ||||| ||||| ||||| ||| Sbjct: 456 aaggcaaggcaattgagaagccaatctacaaccatgttactggtctcctagacccaccgg 515 Query: 507 agctcatccagccccccaagatcttcgtcatcgagggtttgcacccaatgtatgacgaac 566 |||| ||||||||||||||||| || ||||| ||||| || || || |||| ||| |||| Sbjct: 516 agcttatccagccccccaagatttttgtcattgagggcttacatcccatgtttgatgaac 575 Query: 567 gtgtgagagacctccttgacttcagcatctacttagacatcagcaatgaggttaagttcg 626 ||||||| |||||||| || |||||||||||| | |||||||| | |||||||| || | Sbjct: 576 gtgtgagggacctcctagatttcagcatctacctggacatcagtgacgaggttaaatttg 635 Query: 627 catggaaaatt 637 ||||||||||| Sbjct: 636 catggaaaatt 646
>dbj|AK099461.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013023E19, full insert sequence Length = 1625 Score = 559 bits (282), Expect = e-156 Identities = 529/611 (86%), Gaps = 9/611 (1%) Strand = Plus / Plus Query: 30 ccaccacatccctgcgctccccatgcaccaccatcccaaactcaggcttcaggcagaacc 89 ||||||| ||||||| ||||||||||||||||| | ||| ||||||||||||| | Sbjct: 175 ccaccacctccctgcactccccatgcaccaccaacacaa------gcttcaggcagaatc 228 Query: 90 aagtcatcctcttcacaaccagaagcagcaggaggagtaccacgaggca---tggagcaa 146 | |||||| ||||||| |||||||||| ||| ||| ||| ||| ||| | ||||||| Sbjct: 229 aggtcatcttcttcaccaccagaagcaacagtaggggtagcacaaggtacggaggagcaa 288 Query: 147 ggaccttccaggtctcatgcgcagttgagaagccaatagtgattggcctggcagcagact 206 | ||||| ||||| |||||| |||| || |||||| | ||||||||||| |||||||||| Sbjct: 289 gaacctttcaggtttcatgctcagtcgacaagccagtggtgattggccttgcagcagact 348 Query: 207 cgggatgtgggaaatccaccttcatgcgccggctcaccagcgtgtttggaggtgctgcag 266 | ||||| ||||| |||||| ||||||||||||||||| |||||||| |||||||||| Sbjct: 349 caggatgcgggaagagcacctttatgcgccggctcaccagtgtgtttggtggtgctgcag 408 Query: 267 agccacccaagggcggcaacccagactcgaacacgctcatcagcgacacgacgacggtca 326 ||||||||||||| |||||||||||||| ||||| |||||||| |||||||| ||||| | Sbjct: 409 agccacccaagggtggcaacccagactcaaacacactcatcagtgacacgacaacggtga 468 Query: 327 tatgccttgatgactaccattccttggacagaaccgggaggaaggagaaaggtgtgactg 386 ||||||| ||||||||||||||||||||||| || || |||||||||||||||||||||| Sbjct: 469 tatgcctcgatgactaccattccttggacaggactggcaggaaggagaaaggtgtgactg 528 Query: 387 ccctggaccccaaggcaaacgactttgatctcatgtatgagcaagtgaaggcaatcaaag 446 |||||||||| | ||||||||| |||||||||||||||||||| |||||||||||||||| Sbjct: 529 ccctggaccctagggcaaacgattttgatctcatgtatgagcaggtgaaggcaatcaaag 588 Query: 447 aaggcaaggctattgagaagccaatctacaaccacgtcactggcctcctcgacccggcgg 506 |||||||||| ||||||||||||||||||||||| || ||||| ||||| ||||| ||| Sbjct: 589 aaggcaaggcaattgagaagccaatctacaaccatgttactggtctcctagacccaccgg 648 Query: 507 agctcatccagccccccaagatcttcgtcatcgagggtttgcacccaatgtatgacgaac 566 |||| ||||||||||||||||| || ||||| ||||| || || || |||| ||| |||| Sbjct: 649 agcttatccagccccccaagatttttgtcattgagggcttacatcccatgtttgatgaac 708 Query: 567 gtgtgagagacctccttgacttcagcatctacttagacatcagcaatgaggttaagttcg 626 ||||||| |||||||| || |||||||||||| | |||||||| | |||||||| || | Sbjct: 709 gtgtgagggacctcctagatttcagcatctacctggacatcagtgacgaggttaaatttg 768 Query: 627 catggaaaatt 637 ||||||||||| Sbjct: 769 catggaaaatt 779
>dbj|AK066164.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013056N04, full insert sequence Length = 1555 Score = 559 bits (282), Expect = e-156 Identities = 529/611 (86%), Gaps = 9/611 (1%) Strand = Plus / Plus Query: 30 ccaccacatccctgcgctccccatgcaccaccatcccaaactcaggcttcaggcagaacc 89 ||||||| ||||||| ||||||||||||||||| | ||| ||||||||||||| | Sbjct: 84 ccaccacctccctgcactccccatgcaccaccaacacaa------gcttcaggcagaatc 137 Query: 90 aagtcatcctcttcacaaccagaagcagcaggaggagtaccacgaggca---tggagcaa 146 | |||||| ||||||| |||||||||| ||||||| ||| ||| ||| | ||||||| Sbjct: 138 aggtcatcttcttcaccaccagaagcaacaggaggggtagcacaaggtacggaggagcaa 197 Query: 147 ggaccttccaggtctcatgcgcagttgagaagccaatagtgattggcctggcagcagact 206 | ||||| ||||| |||||| |||| || |||||| | ||||||||||| |||||||||| Sbjct: 198 gaacctttcaggtttcatgctcagtcgacaagccagtggtgattggccttgcagcagact 257 Query: 207 cgggatgtgggaaatccaccttcatgcgccggctcaccagcgtgtttggaggtgctgcag 266 | ||||| ||||| |||||| ||||||||||||||||| |||||||| |||||||||| Sbjct: 258 caggatgcgggaagggcacctttatgcgccggctcaccagtgtgtttggtggtgctgcag 317 Query: 267 agccacccaagggcggcaacccagactcgaacacgctcatcagcgacacgacgacggtca 326 ||||||||||||| |||||||||||||| ||||| ||||| || |||||||| ||||| | Sbjct: 318 agccacccaagggtggcaacccagactcaaacacactcatgagtgacacgacaacggtga 377 Query: 327 tatgccttgatgactaccattccttggacagaaccgggaggaaggagaaaggtgtgactg 386 ||||||| ||||||||||||||||||||||| || || |||||||||||||||||||||| Sbjct: 378 tatgcctcgatgactaccattccttggacaggactggcaggaaggagaaaggtgtgactg 437 Query: 387 ccctggaccccaaggcaaacgactttgatctcatgtatgagcaagtgaaggcaatcaaag 446 |||||||||| | ||||||||| |||||||||||||||||||| |||||||||||||||| Sbjct: 438 ccctggaccctagggcaaacgattttgatctcatgtatgagcaggtgaaggcaatcaaag 497 Query: 447 aaggcaaggctattgagaagccaatctacaaccacgtcactggcctcctcgacccggcgg 506 |||||||||| ||||||||||||||||||||||| || ||||| ||||| ||||| ||| Sbjct: 498 aaggcaaggcaattgagaagccaatctacaaccatgttactggtctcctagacccaccgg 557 Query: 507 agctcatccagccccccaagatcttcgtcatcgagggtttgcacccaatgtatgacgaac 566 |||| ||||||||||||||||| || ||||| ||||| || || || |||| ||| |||| Sbjct: 558 agcttatccagccccccaagatttttgtcattgagggcttacatcccatgtttgatgaac 617 Query: 567 gtgtgagagacctccttgacttcagcatctacttagacatcagcaatgaggttaagttcg 626 ||||||| |||||||| || |||||||||||| | |||||||| | |||||||| || | Sbjct: 618 gtgtgagggacctcctagatttcagcatctacctggacatcagtgacgaggttaaatttg 677 Query: 627 catggaaaatt 637 ||||||||||| Sbjct: 678 catggaaaatt 688
>gb|AF543191.1| Oryza sativa (indica cultivar-group) phosphoribulokinase precursor gene, complete cds Length = 2443 Score = 523 bits (264), Expect = e-145 Identities = 454/517 (87%), Gaps = 9/517 (1%) Strand = Plus / Plus Query: 30 ccaccacatccctgcgctccccatgcaccaccatcccaaactcaggcttcaggcagaacc 89 ||||||| ||||||| ||||||||||||||||| | ||| ||||||||||||||| Sbjct: 188 ccaccacctccctgcactccccatgcaccaccaacacaa------gcttcaggcagaacc 241 Query: 90 aagtcatcctcttcacaaccagaagcagcaggaggagtaccacgaggca---tggagcaa 146 | |||||| ||||||| |||||||||| ||||||| ||| ||| ||| | ||||||| Sbjct: 242 aggtcatcttcttcaccaccagaagcaacaggaggggtagcacaaggtacggaggagcaa 301 Query: 147 ggaccttccaggtctcatgcgcagttgagaagccaatagtgattggcctggcagcagact 206 | ||||| ||||| |||||| |||| || |||||| | ||||||||||| |||||||||| Sbjct: 302 gaacctttcaggtttcatgctcagtcgacaagccagtggtgattggccttgcagcagact 361 Query: 207 cgggatgtgggaaatccaccttcatgcgccggctcaccagcgtgtttggaggtgctgcag 266 | ||||| ||||| |||||||||||||||||||||||| |||||||| |||||||||| Sbjct: 362 caggatgcgggaagagcaccttcatgcgccggctcaccagtgtgtttggtggtgctgcag 421 Query: 267 agccacccaagggcggcaacccagactcgaacacgctcatcagcgacacgacgacggtca 326 ||||||||||||| |||||||||||||| ||||| |||||||| |||||||| ||||| | Sbjct: 422 agccacccaagggtggcaacccagactcaaacacactcatcagtgacacgacaacggtga 481 Query: 327 tatgccttgatgactaccattccttggacagaaccgggaggaaggagaaaggtgtgactg 386 ||||||| ||||||||||||||||||||||| || || |||||||||||||||||||||| Sbjct: 482 tatgcctcgatgactaccattccttggacaggactggcaggaaggagaaaggtgtgactg 541 Query: 387 ccctggaccccaaggcaaacgactttgatctcatgtatgagcaagtgaaggcaatcaaag 446 |||||||||| | ||||||||| |||||||||||||||||||| |||||||||||||||| Sbjct: 542 ccctggaccctagggcaaacgattttgatctcatgtatgagcaggtgaaggcaatcaaag 601 Query: 447 aaggcaaggctattgagaagccaatctacaaccacgtcactggcctcctcgacccggcgg 506 |||||||||| ||||||||||||||||||||||| || ||||| ||||| ||||| ||| Sbjct: 602 aaggcaaggcaattgagaagccaatctacaaccatgttactggtctcctagacccaccgg 661 Query: 507 agctcatccagccccccaagatcttcgtcatcgaggg 543 |||| ||||||||||||||||| || ||||| ||||| Sbjct: 662 agcttatccagccccccaagatttttgtcattgaggg 698 Score = 69.9 bits (35), Expect = 1e-08 Identities = 65/75 (86%) Strand = Plus / Plus Query: 563 gaacgtgtgagagacctccttgacttcagcatctacttagacatcagcaatgaggttaag 622 ||||||||||| |||||||| || |||||||||||| | |||||||| | |||||||| Sbjct: 1012 gaacgtgtgagggacctcctagatttcagcatctacctggacatcagtgacgaggttaaa 1071 Query: 623 ttcgcatggaaaatt 637 || |||||||||||| Sbjct: 1072 tttgcatggaaaatt 1086
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 507 bits (256), Expect = e-140 Identities = 452/517 (87%), Gaps = 9/517 (1%) Strand = Plus / Plus Query: 30 ccaccacatccctgcgctccccatgcaccaccatcccaaactcaggcttcaggcagaacc 89 ||||||| ||||||| ||||||||||||||||| | ||| ||||||||||||| | Sbjct: 28720530 ccaccacctccctgcactccccatgcaccaccaacacaa------gcttcaggcagaatc 28720583 Query: 90 aagtcatcctcttcacaaccagaagcagcaggaggagtaccacgaggca---tggagcaa 146 | |||||| ||||||| |||||||||| ||||||| ||| ||| ||| | ||||||| Sbjct: 28720584 aggtcatcttcttcaccaccagaagcaacaggaggggtagcacaaggtacggaggagcaa 28720643 Query: 147 ggaccttccaggtctcatgcgcagttgagaagccaatagtgattggcctggcagcagact 206 | ||||| ||||| |||||| |||| || |||||| | ||||||||||| |||||||||| Sbjct: 28720644 gaacctttcaggtttcatgctcagtcgacaagccagtggtgattggccttgcagcagact 28720703 Query: 207 cgggatgtgggaaatccaccttcatgcgccggctcaccagcgtgtttggaggtgctgcag 266 | ||||| ||||| |||||| ||||||||||||||||| |||||||| |||||||||| Sbjct: 28720704 caggatgcgggaagagcacctttatgcgccggctcaccagtgtgtttggtggtgctgcag 28720763 Query: 267 agccacccaagggcggcaacccagactcgaacacgctcatcagcgacacgacgacggtca 326 ||||||||||||| |||||||||||||| ||||| |||||||| |||||||| ||||| | Sbjct: 28720764 agccacccaagggtggcaacccagactcaaacacactcatcagtgacacgacaacggtga 28720823 Query: 327 tatgccttgatgactaccattccttggacagaaccgggaggaaggagaaaggtgtgactg 386 ||||||| ||||||||||||||||||||||| || || |||||||||||||||||||||| Sbjct: 28720824 tatgcctcgatgactaccattccttggacaggactggcaggaaggagaaaggtgtgactg 28720883 Query: 387 ccctggaccccaaggcaaacgactttgatctcatgtatgagcaagtgaaggcaatcaaag 446 |||||||||| | ||||||||| |||||||||||||||||||| |||||||||||||||| Sbjct: 28720884 ccctggaccctagggcaaacgattttgatctcatgtatgagcaggtgaaggcaatcaaag 28720943 Query: 447 aaggcaaggctattgagaagccaatctacaaccacgtcactggcctcctcgacccggcgg 506 |||||||||| ||||||||||||||||||||||| || ||||| ||||| ||||| ||| Sbjct: 28720944 aaggcaaggcaattgagaagccaatctacaaccatgttactggtctcctagacccaccgg 28721003 Query: 507 agctcatccagccccccaagatcttcgtcatcgaggg 543 |||| ||||||||||||||||| || ||||| ||||| Sbjct: 28721004 agcttatccagccccccaagatttttgtcattgaggg 28721040 Score = 69.9 bits (35), Expect = 1e-08 Identities = 65/75 (86%) Strand = Plus / Plus Query: 563 gaacgtgtgagagacctccttgacttcagcatctacttagacatcagcaatgaggttaag 622 ||||||||||| |||||||| || |||||||||||| | |||||||| | |||||||| Sbjct: 28721353 gaacgtgtgagggacctcctagatttcagcatctacctggacatcagtgacgaggttaaa 28721412 Query: 623 ttcgcatggaaaatt 637 || |||||||||||| Sbjct: 28721413 tttgcatggaaaatt 28721427
>dbj|AP004778.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0459B01 Length = 163087 Score = 507 bits (256), Expect = e-140 Identities = 452/517 (87%), Gaps = 9/517 (1%) Strand = Plus / Plus Query: 30 ccaccacatccctgcgctccccatgcaccaccatcccaaactcaggcttcaggcagaacc 89 ||||||| ||||||| ||||||||||||||||| | ||| ||||||||||||| | Sbjct: 37103 ccaccacctccctgcactccccatgcaccaccaacacaa------gcttcaggcagaatc 37156 Query: 90 aagtcatcctcttcacaaccagaagcagcaggaggagtaccacgaggca---tggagcaa 146 | |||||| ||||||| |||||||||| ||||||| ||| ||| ||| | ||||||| Sbjct: 37157 aggtcatcttcttcaccaccagaagcaacaggaggggtagcacaaggtacggaggagcaa 37216 Query: 147 ggaccttccaggtctcatgcgcagttgagaagccaatagtgattggcctggcagcagact 206 | ||||| ||||| |||||| |||| || |||||| | ||||||||||| |||||||||| Sbjct: 37217 gaacctttcaggtttcatgctcagtcgacaagccagtggtgattggccttgcagcagact 37276 Query: 207 cgggatgtgggaaatccaccttcatgcgccggctcaccagcgtgtttggaggtgctgcag 266 | ||||| ||||| |||||| ||||||||||||||||| |||||||| |||||||||| Sbjct: 37277 caggatgcgggaagagcacctttatgcgccggctcaccagtgtgtttggtggtgctgcag 37336 Query: 267 agccacccaagggcggcaacccagactcgaacacgctcatcagcgacacgacgacggtca 326 ||||||||||||| |||||||||||||| ||||| |||||||| |||||||| ||||| | Sbjct: 37337 agccacccaagggtggcaacccagactcaaacacactcatcagtgacacgacaacggtga 37396 Query: 327 tatgccttgatgactaccattccttggacagaaccgggaggaaggagaaaggtgtgactg 386 ||||||| ||||||||||||||||||||||| || || |||||||||||||||||||||| Sbjct: 37397 tatgcctcgatgactaccattccttggacaggactggcaggaaggagaaaggtgtgactg 37456 Query: 387 ccctggaccccaaggcaaacgactttgatctcatgtatgagcaagtgaaggcaatcaaag 446 |||||||||| | ||||||||| |||||||||||||||||||| |||||||||||||||| Sbjct: 37457 ccctggaccctagggcaaacgattttgatctcatgtatgagcaggtgaaggcaatcaaag 37516 Query: 447 aaggcaaggctattgagaagccaatctacaaccacgtcactggcctcctcgacccggcgg 506 |||||||||| ||||||||||||||||||||||| || ||||| ||||| ||||| ||| Sbjct: 37517 aaggcaaggcaattgagaagccaatctacaaccatgttactggtctcctagacccaccgg 37576 Query: 507 agctcatccagccccccaagatcttcgtcatcgaggg 543 |||| ||||||||||||||||| || ||||| ||||| Sbjct: 37577 agcttatccagccccccaagatttttgtcattgaggg 37613 Score = 69.9 bits (35), Expect = 1e-08 Identities = 65/75 (86%) Strand = Plus / Plus Query: 563 gaacgtgtgagagacctccttgacttcagcatctacttagacatcagcaatgaggttaag 622 ||||||||||| |||||||| || |||||||||||| | |||||||| | |||||||| Sbjct: 37926 gaacgtgtgagggacctcctagatttcagcatctacctggacatcagtgacgaggttaaa 37985 Query: 623 ttcgcatggaaaatt 637 || |||||||||||| Sbjct: 37986 tttgcatggaaaatt 38000
>gb|U97113.1|FRU97113 Festuca rubra putative phosphoribulokinase mc7214rc mRNA, partial cds Length = 307 Score = 400 bits (202), Expect = e-108 Identities = 257/278 (92%) Strand = Plus / Plus Query: 5 aacatggcattctgcagcccacacaccaccacatccctgcgctccccatgcaccaccatc 64 |||||||||||||||||| ||||||||||||||||||||| ||||||| ||||||||||| Sbjct: 24 aacatggcattctgcagctcacacaccaccacatccctgcactccccacgcaccaccatc 83 Query: 65 ccaaactcaggcttcaggcagaaccaagtcatcctcttcacaaccagaagcagcaggagg 124 ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 84 ccaaactcaggcttcaggcagaaccaagtcatcctcttcacaaccagaacgagcaggagg 143 Query: 125 agtaccacgaggcatggagcaaggaccttccaggtctcatgcgcagttgagaagccaata 184 |||| ||||||| |||||||||||||||||||||| ||||||||||||| ||||||||| Sbjct: 144 agtaacacgaggaatggagcaaggaccttccaggttacatgcgcagttgacaagccaata 203 Query: 185 gtgattggcctggcagcagactcgggatgtgggaaatccaccttcatgcgccggctcacc 244 ||||||||||||||||||||||| ||||||||||||||||| ||||||| |||| Sbjct: 204 gtgattggcctggcagcagactctggatgtgggaaatccactttcatgcnbnnnnncacc 263 Query: 245 agcgtgtttggaggtgctgcagagccacccaagggcgg 282 ||||||||||| ||||||||||||||||||| |||||| Sbjct: 264 agcgtgtttggtggtgctgcagagccacccaggggcgg 301
>gb|AY106347.1| Zea mays PCO092382 mRNA sequence Length = 1513 Score = 361 bits (182), Expect = 2e-96 Identities = 416/494 (84%) Strand = Plus / Plus Query: 143 gcaaggaccttccaggtctcatgcgcagttgagaagccaatagtgattggcctggcagca 202 ||||||| |||||||||||| ||| | || || ||||| | |||||||||||||| ||| Sbjct: 184 gcaaggagcttccaggtctcgtgctccgtcgacaagccggtggtgattggcctggcggca 243 Query: 203 gactcgggatgtgggaaatccaccttcatgcgccggctcaccagcgtgtttggaggtgct 262 ||||| || || || || ||||||||||||||||||||||||||| || || || || Sbjct: 244 gactcagggtgcggcaagagcaccttcatgcgccggctcaccagcgtcttcggtggcgcc 303 Query: 263 gcagagccacccaagggcggcaacccagactcgaacacgctcatcagcgacacgacgacg 322 || ||||| ||||||||||| ||||| ||||| |||||||||||||| ||||| ||||| Sbjct: 304 gcggagccgcccaagggcgggaacccggactccaacacgctcatcagtgacaccacgaca 363 Query: 323 gtcatatgccttgatgactaccattccttggacagaaccgggaggaaggagaaaggtgtg 382 || |||||||| || |||||||||||| ||||||| | ||| |||||||||||||||||| Sbjct: 364 gtgatatgcctcgacgactaccattccctggacaggaacggcaggaaggagaaaggtgtg 423 Query: 383 actgccctggaccccaaggcaaacgactttgatctcatgtatgagcaagtgaaggcaatc 442 || ||||| ||||| | ||| ||| |||||||||||||||||||||| |||||||| ||| Sbjct: 424 accgccctcgaccctagggccaacaactttgatctcatgtatgagcaggtgaaggcgatc 483 Query: 443 aaagaaggcaaggctattgagaagccaatctacaaccacgtcactggcctcctcgacccg 502 || |||||| |||| | |||||||| ||||||||||| |||||||||||||||||||| Sbjct: 484 aaggaaggccaggcagtcgagaagcccatctacaaccatgtcactggcctcctcgaccct 543 Query: 503 gcggagctcatccagccccccaagatcttcgtcatcgagggtttgcacccaatgtatgac 562 ||||||| ||| ||| || ||||| |||||||| || ||| |||||||||||| || Sbjct: 544 ccggagcttatcgcgccaccaaagattttcgtcattgaaggtctgcacccaatgttcgat 603 Query: 563 gaacgtgtgagagacctccttgacttcagcatctacttagacatcagcaatgaggttaag 622 || || ||||| |||||| | || ||||| |||||||| |||||||| |||| |||||| Sbjct: 604 gagcgagtgagggacctcttagatttcagtatctacttggacatcagtgatgaagttaag 663 Query: 623 ttcgcatggaaaat 636 || ||||||||||| Sbjct: 664 tttgcatggaaaat 677 Score = 61.9 bits (31), Expect = 2e-06 Identities = 70/83 (84%) Strand = Plus / Plus Query: 15 tctgcagcccacacaccaccacatccctgcgctccccatgcaccaccatcccaaactcag 74 |||||||| | ||||| ||||| |||||||||||||||||||| ||| || | ||| ||| Sbjct: 53 tctgcagcgcgcacactaccacctccctgcgctccccatgcacgaccgtctcgaacgcag 112 Query: 75 gcttcaggcagaaccaagtcatc 97 | | |||||||| ||||||||| Sbjct: 113 gtctgaggcagaagcaagtcatc 135
>ref|XM_462675.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1488 Score = 133 bits (67), Expect = 8e-28 Identities = 148/175 (84%) Strand = Plus / Plus Query: 463 gaagccaatctacaaccacgtcactggcctcctcgacccggcggagctcatccagccccc 522 |||||| ||||||||||||| ||| ||||||||||||||| | ||||||||| ||||| Sbjct: 435 gaagcccatctacaaccacgccacgggcctcctcgacccgccagagctcatcactccccc 494 Query: 523 caagatcttcgtcatcgagggtttgcacccaatgtatgacgaacgtgtgagagacctcct 582 ||||||| ||||| ||||||| |||||||||||||||| || ||||| || | ||| || Sbjct: 495 caagatcctcgtcgtcgagggcctgcacccaatgtatgatgagcgtgtcaggggcctgct 554 Query: 583 tgacttcagcatctacttagacatcagcaatgaggttaagttcgcatggaaaatt 637 ||||||||||||||| | |||||||||| || | ||||| |||||||||||| Sbjct: 555 ggacttcagcatctacctggacatcagcagcgacatcaagtttgcatggaaaatt 609
>ref|XM_473730.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1488 Score = 133 bits (67), Expect = 8e-28 Identities = 148/175 (84%) Strand = Plus / Plus Query: 463 gaagccaatctacaaccacgtcactggcctcctcgacccggcggagctcatccagccccc 522 |||||| ||||||||||||| ||| ||||||||||||||| | ||||||||| ||||| Sbjct: 435 gaagcccatctacaaccacgccacgggcctcctcgacccgccagagctcatcactccccc 494 Query: 523 caagatcttcgtcatcgagggtttgcacccaatgtatgacgaacgtgtgagagacctcct 582 ||||||| ||||| ||||||| |||||||||||||||| || ||||| || | ||| || Sbjct: 495 caagatcctcgtcgtcgagggcctgcacccaatgtatgatgagcgtgtcaggggcctgct 554 Query: 583 tgacttcagcatctacttagacatcagcaatgaggttaagttcgcatggaaaatt 637 ||||||||||||||| | |||||||||| || | ||||| |||||||||||| Sbjct: 555 ggacttcagcatctacctggacatcagcagcgacatcaagtttgcatggaaaatt 609
>dbj|AP004488.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT02F05, TM0020, complete sequence Length = 80920 Score = 133 bits (67), Expect = 8e-28 Identities = 220/271 (81%) Strand = Plus / Plus Query: 180 caatagtgattggcctggcagcagactcgggatgtgggaaatccaccttcatgcgccggc 239 |||| |||||||| || || || ||||| ||||||||||| |||||||||| | ||| Sbjct: 19692 caattgtgattggtctagctgctgactcaggatgtgggaagagcaccttcatgaggaggc 19751 Query: 240 tcaccagcgtgtttggaggtgctgcagagccacccaagggcggcaacccagactcgaaca 299 |||| || ||||||||||| || ||||||||||| ||||| || |||||||| || |||| Sbjct: 19752 tcacaagtgtgtttggaggagcagcagagccaccaaagggtgggaacccagattccaaca 19811 Query: 300 cgctcatcagcgacacgacgacggtcatatgccttgatgactaccattccttggacagaa 359 | |||||||| ||||| || || || ||||| | ||||| |||||||| | || |||| Sbjct: 19812 ctctcatcagtgacaccaccactgtgatatgtttggatgattaccattcacttgatagaa 19871 Query: 360 ccgggaggaaggagaaaggtgtgactgccctggaccccaaggcaaacgactttgatctca 419 | || || ||||| || ||||| ||||| || ||||| || || || || |||||||||| Sbjct: 19872 ctggtagaaaggaaaagggtgtcactgcacttgacccaaaagctaatgattttgatctca 19931 Query: 420 tgtatgagcaagtgaaggcaatcaaagaagg 450 ||||||||||||| |||||||| || ||||| Sbjct: 19932 tgtatgagcaagttaaggcaattaaggaagg 19962 Score = 67.9 bits (34), Expect = 4e-08 Identities = 49/54 (90%) Strand = Plus / Plus Query: 584 gacttcagcatctacttagacatcagcaatgaggttaagttcgcatggaaaatt 637 ||||| ||||||||||||||||| ||||||||||| || ||||| ||||||||| Sbjct: 20891 gactttagcatctacttagacattagcaatgaggtgaaattcgcttggaaaatt 20944
>gb|M73707.1|CIPPRK Mesembryanthemum crystallinum phosphoribulokinase mRNA, complete CDS Length = 1520 Score = 125 bits (63), Expect = 2e-25 Identities = 243/303 (80%) Strand = Plus / Plus Query: 335 gatgactaccattccttggacagaaccgggaggaaggagaaaggtgtgactgccctggac 394 ||||| ||||||||| | || || || |||||||| |||||||| || ||||| |||| Sbjct: 433 gatgattaccattcccttgataggacagggaggaaagagaaaggagttactgctttggat 492 Query: 395 cccaaggcaaacgactttgatctcatgtatgagcaagtgaaggcaatcaaagaaggcaag 454 || | || || || ||||| ||||||||||||||||| ||||| | |||||||| ||| Sbjct: 493 ccaagagccaatgattttgacctcatgtatgagcaagttaaggctttgaaagaaggtaag 552 Query: 455 gctattgagaagccaatctacaaccacgtcactggcctcctcgacccggcggagctcatc 514 ||| |||||||||| || |||||||| || |||||| | | || | | ||||||||| Sbjct: 553 gctgttgagaagcctatttacaaccatgttactggcttgttggatgcacctgagctcatc 612 Query: 515 cagccccccaagatcttcgtcatcgagggtttgcacccaatgtatgacgaacgtgtgaga 574 |||| || |||||||| ||||| || ||||||||||| |||| |||| ||||||||| Sbjct: 613 aagccacctaagatcttggtcattgaaggtttgcaccctatgtttgactcacgtgtgagg 672 Query: 575 gacctccttgacttcagcatctacttagacatcagcaatgaggttaagttcgcatggaaa 634 ||| | || |||||||| ||||| || |||||||||||||| || || || || |||||| Sbjct: 673 gacttgctggacttcagtatctatttggacatcagcaatgaagtgaaatttgcctggaaa 732 Query: 635 att 637 ||| Sbjct: 733 att 735
>gb|AF173671.1|AF173671 Beta vulgaris clone PRKRTUNI phosphoribulokinase (Prk) mRNA, partial cds Length = 814 Score = 99.6 bits (50), Expect = 1e-17 Identities = 107/126 (84%) Strand = Plus / Plus Query: 512 atccagccccccaagatcttcgtcatcgagggtttgcacccaatgtatgacgaacgtgtg 571 ||||||||||| |||||||| ||||||||||| |||||||| |||||||||| |||||| Sbjct: 300 atccagcccccgaagatcttggtcatcgagggcttgcaccccatgtatgacgcacgtgtt 359 Query: 572 agagacctccttgacttcagcatctacttagacatcagcaatgaggttaagttcgcatgg 631 || || | || ||||||||| ||||||| ||||| |||||||| || || || || ||| Sbjct: 360 agggagttgctggacttcagcctctacttggacattagcaatgaagtcaaatttgcctgg 419 Query: 632 aaaatt 637 |||||| Sbjct: 420 aaaatt 425 Score = 48.1 bits (24), Expect = 0.036 Identities = 39/44 (88%) Strand = Plus / Plus Query: 248 gtgtttggaggtgctgcagagccacccaagggcggcaacccaga 291 |||||||||||||| ||||| ||||| ||||| || |||||||| Sbjct: 36 gtgtttggaggtgcagcagaaccaccaaagggaggaaacccaga 79
>emb|AL731579.4|OSJN00225 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0006A01, complete sequence Length = 143157 Score = 93.7 bits (47), Expect = 7e-16 Identities = 83/95 (87%) Strand = Plus / Minus Query: 463 gaagccaatctacaaccacgtcactggcctcctcgacccggcggagctcatccagccccc 522 |||||| ||||||||||||| ||| ||||||||||||||| | ||||||||| ||||| Sbjct: 121337 gaagcccatctacaaccacgccacgggcctcctcgacccgccagagctcatcactccccc 121278 Query: 523 caagatcttcgtcatcgagggtttgcacccaatgt 557 ||||||| ||||| ||||||| |||||||||||| Sbjct: 121277 caagatcctcgtcgtcgagggcctgcacccaatgt 121243 Score = 44.1 bits (22), Expect = 0.56 Identities = 46/54 (85%) Strand = Plus / Minus Query: 584 gacttcagcatctacttagacatcagcaatgaggttaagttcgcatggaaaatt 637 ||||||||||||||| | |||||||||| || | ||||| |||||||||||| Sbjct: 121112 gacttcagcatctacctggacatcagcagcgacatcaagtttgcatggaaaatt 121059
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 93.7 bits (47), Expect = 7e-16 Identities = 83/95 (87%) Strand = Plus / Minus Query: 463 gaagccaatctacaaccacgtcactggcctcctcgacccggcggagctcatccagccccc 522 |||||| ||||||||||||| ||| ||||||||||||||| | ||||||||| ||||| Sbjct: 30142361 gaagcccatctacaaccacgccacgggcctcctcgacccgccagagctcatcactccccc 30142302 Query: 523 caagatcttcgtcatcgagggtttgcacccaatgt 557 ||||||| ||||| ||||||| |||||||||||| Sbjct: 30142301 caagatcctcgtcgtcgagggcctgcacccaatgt 30142267 Score = 93.7 bits (47), Expect = 7e-16 Identities = 83/95 (87%) Strand = Plus / Minus Query: 463 gaagccaatctacaaccacgtcactggcctcctcgacccggcggagctcatccagccccc 522 |||||| ||||||||||||| ||| ||||||||||||||| | ||||||||| ||||| Sbjct: 30081658 gaagcccatctacaaccacgccacgggcctcctcgacccgccagagctcatcactccccc 30081599 Query: 523 caagatcttcgtcatcgagggtttgcacccaatgt 557 ||||||| ||||| ||||||| |||||||||||| Sbjct: 30081598 caagatcctcgtcgtcgagggcctgcacccaatgt 30081564 Score = 44.1 bits (22), Expect = 0.56 Identities = 46/54 (85%) Strand = Plus / Minus Query: 584 gacttcagcatctacttagacatcagcaatgaggttaagttcgcatggaaaatt 637 ||||||||||||||| | |||||||||| || | ||||| |||||||||||| Sbjct: 30142136 gacttcagcatctacctggacatcagcagcgacatcaagtttgcatggaaaatt 30142083 Score = 44.1 bits (22), Expect = 0.56 Identities = 46/54 (85%) Strand = Plus / Minus Query: 584 gacttcagcatctacttagacatcagcaatgaggttaagttcgcatggaaaatt 637 ||||||||||||||| | |||||||||| || | ||||| |||||||||||| Sbjct: 30081433 gacttcagcatctacctggacatcagcagcgacatcaagtttgcatggaaaatt 30081380
>emb|AL607004.4|OSJN00129 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNba0093F12, complete sequence Length = 186142 Score = 93.7 bits (47), Expect = 7e-16 Identities = 83/95 (87%) Strand = Plus / Minus Query: 463 gaagccaatctacaaccacgtcactggcctcctcgacccggcggagctcatccagccccc 522 |||||| ||||||||||||| ||| ||||||||||||||| | ||||||||| ||||| Sbjct: 38769 gaagcccatctacaaccacgccacgggcctcctcgacccgccagagctcatcactccccc 38710 Query: 523 caagatcttcgtcatcgagggtttgcacccaatgt 557 ||||||| ||||| ||||||| |||||||||||| Sbjct: 38709 caagatcctcgtcgtcgagggcctgcacccaatgt 38675 Score = 44.1 bits (22), Expect = 0.56 Identities = 46/54 (85%) Strand = Plus / Minus Query: 584 gacttcagcatctacttagacatcagcaatgaggttaagttcgcatggaaaatt 637 ||||||||||||||| | |||||||||| || | ||||| |||||||||||| Sbjct: 38544 gacttcagcatctacctggacatcagcagcgacatcaagtttgcatggaaaatt 38491
>ref|NM_102940.3| Arabidopsis thaliana ATP binding / kinase/ phosphoribulokinase/ uridine kinase AT1G32060 mRNA, complete cds Length = 1539 Score = 85.7 bits (43), Expect = 2e-13 Identities = 109/131 (83%) Strand = Plus / Plus Query: 224 accttcatgcgccggctcaccagcgtgtttggaggtgctgcagagccacccaagggcggc 283 ||||| ||||| ||||||||||||| ||||| || ||||| ||||||| || ||||| Sbjct: 311 acctttatgcggaggctcaccagcgtctttggtggcgctgctaagccaccaaaaggcggg 370 Query: 284 aacccagactcgaacacgctcatcagcgacacgacgacggtcatatgccttgatgactac 343 ||||| || || ||||| ||||||||||||||||| || || || || |||||||| ||| Sbjct: 371 aaccctgattccaacacactcatcagcgacacgaccactgtgatctgtcttgatgattac 430 Query: 344 cattccttgga 354 ||||| ||||| Sbjct: 431 cattctttgga 441 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 407 gactttgatctcatgtatgagcaagt 432 |||||||||||||||||||||||||| Sbjct: 494 gactttgatctcatgtatgagcaagt 519
>gb|BT000019.1| Arabidopsis thaliana phosphoribulokinase precursor (At1g32060) mRNA, complete cds Length = 1247 Score = 85.7 bits (43), Expect = 2e-13 Identities = 109/131 (83%) Strand = Plus / Plus Query: 224 accttcatgcgccggctcaccagcgtgtttggaggtgctgcagagccacccaagggcggc 283 ||||| ||||| ||||||||||||| ||||| || ||||| ||||||| || ||||| Sbjct: 193 acctttatgcggaggctcaccagcgtctttggtggcgctgctaagccaccaaaaggcggg 252 Query: 284 aacccagactcgaacacgctcatcagcgacacgacgacggtcatatgccttgatgactac 343 ||||| || || ||||| ||||||||||||||||| || || || || |||||||| ||| Sbjct: 253 aaccctgattccaacacactcatcagcgacacgaccactgtgatctgtcttgatgattac 312 Query: 344 cattccttgga 354 ||||| ||||| Sbjct: 313 cattctttgga 323 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 407 gactttgatctcatgtatgagcaagt 432 |||||||||||||||||||||||||| Sbjct: 376 gactttgatctcatgtatgagcaagt 401
>gb|AY128355.1| Arabidopsis thaliana phosphoribulokinase precursor (At1g32060) mRNA, complete cds Length = 1503 Score = 85.7 bits (43), Expect = 2e-13 Identities = 109/131 (83%) Strand = Plus / Plus Query: 224 accttcatgcgccggctcaccagcgtgtttggaggtgctgcagagccacccaagggcggc 283 ||||| ||||| ||||||||||||| ||||| || ||||| ||||||| || ||||| Sbjct: 299 acctttatgcggaggctcaccagcgtctttggtggcgctgctaagccaccaaaaggcggg 358 Query: 284 aacccagactcgaacacgctcatcagcgacacgacgacggtcatatgccttgatgactac 343 ||||| || || ||||| ||||||||||||||||| || || || || |||||||| ||| Sbjct: 359 aaccctgattccaacacactcatcagcgacacgaccactgtgatctgtcttgatgattac 418 Query: 344 cattccttgga 354 ||||| ||||| Sbjct: 419 cattctttgga 429 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 407 gactttgatctcatgtatgagcaagt 432 |||||||||||||||||||||||||| Sbjct: 482 gactttgatctcatgtatgagcaagt 507
>emb|X58149.1|ATPRK A.thaliana PRKase gene for Ribulose-5-phosphate kinase Length = 1495 Score = 85.7 bits (43), Expect = 2e-13 Identities = 109/131 (83%) Strand = Plus / Plus Query: 224 accttcatgcgccggctcaccagcgtgtttggaggtgctgcagagccacccaagggcggc 283 ||||| ||||| ||||||||||||| ||||| || ||||| ||||||| || ||||| Sbjct: 271 acctttatgcggaggctcaccagcgtctttggtggcgctgctaagccaccaaaaggcggg 330 Query: 284 aacccagactcgaacacgctcatcagcgacacgacgacggtcatatgccttgatgactac 343 ||||| || || ||||| ||||||||||||||||| || || || || |||||||| ||| Sbjct: 331 aaccctgattccaacacactcatcagcgacacgaccactgtgatctgtcttgatgattac 390 Query: 344 cattccttgga 354 ||||| ||||| Sbjct: 391 cattctttgga 401 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 407 gactttgatctcatgtatgagcaagt 432 |||||||||||||||||||||||||| Sbjct: 454 gactttgatctcatgtatgagcaagt 479
>gb|AY044335.1| Arabidopsis thaliana Unknown protein (T12O21.4) mRNA, complete cds Length = 1240 Score = 85.7 bits (43), Expect = 2e-13 Identities = 109/131 (83%) Strand = Plus / Plus Query: 224 accttcatgcgccggctcaccagcgtgtttggaggtgctgcagagccacccaagggcggc 283 ||||| ||||| ||||||||||||| ||||| || ||||| ||||||| || ||||| Sbjct: 193 acctttatgcggaggctcaccagcgtctttggtggcgctgctaagccaccaaaaggcggg 252 Query: 284 aacccagactcgaacacgctcatcagcgacacgacgacggtcatatgccttgatgactac 343 ||||| || || ||||| ||||||||||||||||| || || || || |||||||| ||| Sbjct: 253 aaccctgattccaacacactcatcagcgacacgaccactgtgatctgtcttgatgattac 312 Query: 344 cattccttgga 354 ||||| ||||| Sbjct: 313 cattctttgga 323 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 407 gactttgatctcatgtatgagcaagt 432 |||||||||||||||||||||||||| Sbjct: 376 gactttgatctcatgtatgagcaagt 401
>emb|BX814849.1|CNS0AAMX Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS11ZB03 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 992 Score = 85.7 bits (43), Expect = 2e-13 Identities = 109/131 (83%) Strand = Plus / Plus Query: 224 accttcatgcgccggctcaccagcgtgtttggaggtgctgcagagccacccaagggcggc 283 ||||| ||||| ||||||||||||| ||||| || ||||| ||||||| || ||||| Sbjct: 312 acctttatgcggaggctcaccagcgtctttggtggcgctgctaagccaccaaaaggcggg 371 Query: 284 aacccagactcgaacacgctcatcagcgacacgacgacggtcatatgccttgatgactac 343 ||||| || || ||||| ||||||||||||||||| || || || || |||||||| ||| Sbjct: 372 aaccctgattccaacacactcatcagcgacacgaccactgtgatctgtcttgatgattac 431 Query: 344 cattccttgga 354 ||||| ||||| Sbjct: 432 cattctttgga 442 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 407 gactttgatctcatgtatgagcaagt 432 |||||||||||||||||||||||||| Sbjct: 495 gactttgatctcatgtatgagcaagt 520
>gb|AC074309.4|AC074309 Arabidopsis thaliana chromosome 1 BAC T12O21 genomic sequence, complete sequence Length = 75298 Score = 85.7 bits (43), Expect = 2e-13 Identities = 109/131 (83%) Strand = Plus / Minus Query: 224 accttcatgcgccggctcaccagcgtgtttggaggtgctgcagagccacccaagggcggc 283 ||||| ||||| ||||||||||||| ||||| || ||||| ||||||| || ||||| Sbjct: 7996 acctttatgcggaggctcaccagcgtctttggtggcgctgctaagccaccaaaaggcggg 7937 Query: 284 aacccagactcgaacacgctcatcagcgacacgacgacggtcatatgccttgatgactac 343 ||||| || || ||||| ||||||||||||||||| || || || || |||||||| ||| Sbjct: 7936 aaccctgattccaacacactcatcagcgacacgaccactgtgatctgtcttgatgattac 7877 Query: 344 cattccttgga 354 ||||| ||||| Sbjct: 7876 cattctttgga 7866 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 407 gactttgatctcatgtatgagcaagt 432 |||||||||||||||||||||||||| Sbjct: 7813 gactttgatctcatgtatgagcaagt 7788
>gb|AY084576.1| Arabidopsis thaliana clone 11226 mRNA, complete sequence Length = 1517 Score = 85.7 bits (43), Expect = 2e-13 Identities = 109/131 (83%) Strand = Plus / Plus Query: 224 accttcatgcgccggctcaccagcgtgtttggaggtgctgcagagccacccaagggcggc 283 ||||| ||||| ||||||||||||| ||||| || ||||| ||||||| || ||||| Sbjct: 302 acctttatgcggaggctcaccagcgtctttggtggcgctgctaagccaccaaaaggcggg 361 Query: 284 aacccagactcgaacacgctcatcagcgacacgacgacggtcatatgccttgatgactac 343 ||||| || || ||||| ||||||||||||||||| || || || || |||||||| ||| Sbjct: 362 aaccctgattccaacacactcatcagcgacacgaccactgtgatctgtcttgatgattac 421 Query: 344 cattccttgga 354 ||||| ||||| Sbjct: 422 cattctttgga 432 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 407 gactttgatctcatgtatgagcaagt 432 |||||||||||||||||||||||||| Sbjct: 485 gactttgatctcatgtatgagcaagt 510
>emb|X07654.1|SOPRK Spinach mRNA for phosphoribulokinase (EC 2.7.1.19) Length = 1470 Score = 83.8 bits (42), Expect = 6e-13 Identities = 96/114 (84%) Strand = Plus / Plus Query: 524 aagatcttcgtcatcgagggtttgcacccaatgtatgacgaacgtgtgagagacctcctt 583 |||||||| ||||| || || || ||||| |||||||||| ||||||||| || | || Sbjct: 559 aagatcttggtcattgaagggttacaccccatgtatgacgcacgtgtgagggaattgcta 618 Query: 584 gacttcagcatctacttagacatcagcaatgaggttaagttcgcatggaaaatt 637 ||||||||||||||||| ||||| |||||||| ||||| || || ||||||||| Sbjct: 619 gacttcagcatctacttggacattagcaatgaagttaaatttgcctggaaaatt 672
>gb|M21338.1|SPIPRK Spinach phosphoribulokinase (PRK) mRNA, 3' end Length = 1411 Score = 83.8 bits (42), Expect = 6e-13 Identities = 96/114 (84%) Strand = Plus / Plus Query: 524 aagatcttcgtcatcgagggtttgcacccaatgtatgacgaacgtgtgagagacctcctt 583 |||||||| ||||| || || || ||||| |||||||||| ||||||||| || | || Sbjct: 528 aagatcttggtcattgaagggttacaccccatgtatgacgcacgtgtgagggaattgcta 587 Query: 584 gacttcagcatctacttagacatcagcaatgaggttaagttcgcatggaaaatt 637 ||||||||||||||||| ||||| |||||||| ||||| || || ||||||||| Sbjct: 588 gacttcagcatctacttggacattagcaatgaagttaaatttgcctggaaaatt 641
>gb|DQ226963.1| Boechera divaricarpa isolate AD-E7 mRNA sequence Length = 599 Score = 81.8 bits (41), Expect = 3e-12 Identities = 134/165 (81%) Strand = Plus / Plus Query: 473 tacaaccacgtcactggcctcctcgacccggcggagctcatccagccccccaagatcttc 532 |||||||| |||||||| || || |||||| | ||||| || ||||| || ||||| | Sbjct: 175 tacaaccatgtcactggacttcttgacccgcctgagcttattcagcctcctaagattctt 234 Query: 533 gtcatcgagggtttgcacccaatgtatgacgaacgtgtgagagacctccttgacttcagc 592 |||||||| ||| | |||||||||| ||| || | || |||||| | || |||||||| Sbjct: 235 gtcatcgaaggtcttcacccaatgtttgatgagagagtaagagacttactcgacttcagt 294 Query: 593 atctacttagacatcagcaatgaggttaagttcgcatggaaaatt 637 |||||||||||||| ||||| || || |||||||| ||||||||| Sbjct: 295 atctacttagacattagcaacgaagtcaagttcgcttggaaaatt 339 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 302 ctcatcagcgacacgacgacggtcatatgccttgatgactaccattccttggacag 357 ||||||||||||||||| || || || || ||||| || ||||||||||||||||| Sbjct: 4 ctcatcagcgacacgaccaccgtgatctgtcttgacgattaccattccttggacag 59 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 407 gactttgatctcatgtatgagcaagt 432 |||||||||||||||||||||||||| Sbjct: 109 gactttgatctcatgtatgagcaagt 134
>gb|DQ226798.1| Boechera divaricarpa isolate SLW-B-C10 mRNA sequence Length = 517 Score = 81.8 bits (41), Expect = 3e-12 Identities = 134/165 (81%) Strand = Plus / Plus Query: 473 tacaaccacgtcactggcctcctcgacccggcggagctcatccagccccccaagatcttc 532 |||||||| |||||||| || || |||||| | ||||| || ||||| || ||||| | Sbjct: 250 tacaaccatgtcactggacttcttgacccgcctgagcttattcagcctcctaagattctt 309 Query: 533 gtcatcgagggtttgcacccaatgtatgacgaacgtgtgagagacctccttgacttcagc 592 |||||||| ||| | |||||||||| ||| || | || |||||| | || |||||||| Sbjct: 310 gtcatcgaaggtcttcacccaatgtttgatgagagagtaagagacttactcgacttcagt 369 Query: 593 atctacttagacatcagcaatgaggttaagttcgcatggaaaatt 637 |||||||||||||| ||||| || || |||||||| ||||||||| Sbjct: 370 atctacttagacattagcaacgaagtcaagttcgcttggaaaatt 414 Score = 81.8 bits (41), Expect = 3e-12 Identities = 101/121 (83%) Strand = Plus / Plus Query: 237 ggctcaccagcgtgtttggaggtgctgcagagccacccaagggcggcaacccagactcga 296 |||| |||||||| || || |||||||| ||||||| || ||||| ||||| || || | Sbjct: 14 ggcttaccagcgtcttcggtggtgctgccaagccaccaaaaggcgggaaccctgattcca 73 Query: 297 acacgctcatcagcgacacgacgacggtcatatgccttgatgactaccattccttggaca 356 |||| ||||||||||||||||| || || || || ||||| || |||||||||||||||| Sbjct: 74 acacactcatcagcgacacgaccaccgtgatctgtcttgacgattaccattccttggaca 133 Query: 357 g 357 | Sbjct: 134 g 134 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 407 gactttgatctcatgtatgagcaagt 432 |||||||||||||||||||||||||| Sbjct: 184 gactttgatctcatgtatgagcaagt 209
>emb|Y11248.1|PSPHOBKIN P.sativum mRNA for phosphoribulokinase, partial Length = 1313 Score = 75.8 bits (38), Expect = 2e-10 Identities = 146/182 (80%) Strand = Plus / Plus Query: 251 tttggaggtgctgcagagccacccaagggcggcaacccagactcgaacacgctcatcagc 310 |||||||| || ||||||||||| || || || || || || || ||||| || ||||| Sbjct: 89 tttggaggagcagcagagccaccaaaaggtggtaatcctgattctaacacacttatcagt 148 Query: 311 gacacgacgacggtcatatgccttgatgactaccattccttggacagaaccgggaggaag 370 ||||| || || |||||||| | ||||| || ||||| ||||| |||||||| || || Sbjct: 149 gacacaacaactgtcatatgtttggatgattatcattctttggatagaaccggtagaaaa 208 Query: 371 gagaaaggtgtgactgccctggaccccaaggcaaacgactttgatctcatgtatgagcaa 430 ||||||||||| ||||| || || || || || || || ||||||||||||||||| ||| Sbjct: 209 gagaaaggtgttactgcacttgatccaaaagctaatgattttgatctcatgtatgaacaa 268 Query: 431 gt 432 || Sbjct: 269 gt 270 Score = 44.1 bits (22), Expect = 0.56 Identities = 46/54 (85%) Strand = Plus / Plus Query: 584 gacttcagcatctacttagacatcagcaatgaggttaagttcgcatggaaaatt 637 |||||||| || ||||||||||| || |||||||| || || || ||||||||| Sbjct: 422 gacttcagtatttacttagacattagtaatgaggtgaaatttgcttggaaaatt 475
>gb|AY772250.1| Euglena gracilis chloroplast phosphoribulokinase (PRK) mRNA, complete cds; nuclear gene for chloroplast product Length = 1479 Score = 50.1 bits (25), Expect = 0.009 Identities = 37/41 (90%) Strand = Plus / Plus Query: 203 gactcgggatgtgggaaatccaccttcatgcgccggctcac 243 ||||| ||||||||||| |||||||||||||| || ||||| Sbjct: 361 gactcaggatgtgggaagtccaccttcatgcggcgtctcac 401
>gb|DQ118593.1| Karlodinium micrum isolate 7629 chloroplast phosphoribulokinase mRNA, complete cds; nuclear gene for chloroplast product Length = 1546 Score = 44.1 bits (22), Expect = 0.56 Identities = 25/26 (96%) Strand = Plus / Plus Query: 464 aagccaatctacaaccacgtcactgg 489 ||||||||||||||||||| |||||| Sbjct: 655 aagccaatctacaaccacgacactgg 680
>gb|AC157560.3| Mus musculus chromosome 15, clone RP24-270I3, complete sequence Length = 157844 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 22 cccacacaccaccacatccct 42 ||||||||||||||||||||| Sbjct: 118087 cccacacaccaccacatccct 118107
>emb|AL034554.8|HS994L9 Human DNA sequence from clone RP5-994L9 on chromosome 20p12.3-13 Contains STS and GSSs, complete sequence Length = 137739 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 76 cttcaggcagaaccaagtcatcctc 100 ||||| ||||||||||||||||||| Sbjct: 109984 cttcaagcagaaccaagtcatcctc 109960
>gb|AY267695.1| Bigelowiella natans phosphoribulokinase mRNA, complete cds; nuclear gene for plastid product Length = 1609 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 462 agaagccaatctacaaccacg 482 ||||||||||||||||||||| Sbjct: 683 agaagccaatctacaaccacg 703
>gb|AY772253.1| Bigelowiella natans chloroplast phosphoribulokinase (PRK) gene, partial cds; nuclear gene for chloroplast product Length = 1786 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 462 agaagccaatctacaaccacg 482 ||||||||||||||||||||| Sbjct: 999 agaagccaatctacaaccacg 1019
>gb|AY826861.1| Isochrysis galbana clone ISPRK1 chloroplast phosphoribulokinase mRNA, partial cds; nuclear gene for chloroplast product Length = 1432 Score = 42.1 bits (21), Expect = 2.2 Identities = 45/53 (84%) Strand = Plus / Plus Query: 185 gtgattggcctggcagcagactcgggatgtgggaaatccaccttcatgcgccg 237 ||||| || ||||| || |||||||| || || || ||||||||||||||||| Sbjct: 89 gtgatcggtctggcggcggactcgggctgcggcaagtccaccttcatgcgccg 141
>emb|Y08610.2|OSPRK Odontella sinensis mRNA for phosphoribulokinase (prk gene) Length = 1258 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 461 gagaagccaatctacaaccacgtca 485 |||||||| |||||||||||||||| Sbjct: 467 gagaagcccatctacaaccacgtca 491 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 221 tccaccttcatgcgccggctcacc 244 ||||||||||||||||| |||||| Sbjct: 212 tccaccttcatgcgccgcctcacc 235
>gb|BC086910.1| Mus musculus secretoglobin, family 3A, member 1, transcript variant A, mRNA (cDNA clone MGC:107611 IMAGE:6759656), complete cds Length = 508 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 364 gaggaaggagaaaggtgtga 383 |||||||||||||||||||| Sbjct: 461 gaggaaggagaaaggtgtga 442
>gb|AF233439.7| Homo sapiens chromosome 8 clones GS1-24F4, CTD-2629I16 map p23.1, complete sequences Length = 231283 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 364 gaggaaggagaaaggtgtga 383 |||||||||||||||||||| Sbjct: 78568 gaggaaggagaaaggtgtga 78587
>gb|AF205406.5| Homo sapiens chromosome 8 clone SCb-633e22 map p23.1, complete sequence Length = 168907 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 364 gaggaaggagaaaggtgtga 383 |||||||||||||||||||| Sbjct: 31267 gaggaaggagaaaggtgtga 31286
>gb|AF298854.5| Homo sapiens chromosome 8 clone SCb-207i3 map p23.1, complete sequence Length = 110283 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 364 gaggaaggagaaaggtgtga 383 |||||||||||||||||||| Sbjct: 41295 gaggaaggagaaaggtgtga 41314
>emb|X14112.1|HE1CG Human herpesvirus 1 complete genome Length = 152261 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 478 ccacgtcactggcctcctcg 497 |||||||||||||||||||| Sbjct: 92292 ccacgtcactggcctcctcg 92311
>gb|AC121932.2| Mus musculus BAC clone RP24-205N24 from 17, complete sequence Length = 152782 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 365 aggaaggagaaaggtgtgac 384 |||||||||||||||||||| Sbjct: 62792 aggaaggagaaaggtgtgac 62811
>gb|AE016795.2| Vibrio vulnificus CMCP6 chromosome I complete sequence Length = 3281944 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 428 caagtgaaggcaatcaaagaaggc 451 |||||||||||||| ||||||||| Sbjct: 1633029 caagtgaaggcaattaaagaaggc 1633052
>gb|DQ400445.1| Ictalurus punctatus immunoglobulin heavy chain gene locus, partial sequence and unknown gene Length = 257153 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 112 aagcagcaggaggagtacca 131 |||||||||||||||||||| Sbjct: 42522 aagcagcaggaggagtacca 42503
>emb|X82631.1|CPIIPHA2 C.porcellus mRNA for typeII phospholipase A2 Length = 760 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 107 accagaagcagcaggaggag 126 |||||||||||||||||||| Sbjct: 79 accagaagcagcaggaggag 60
>gb|AC164171.5| Mus musculus 10 BAC RP24-574G7 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 147660 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 19 cagcccacacaccaccacat 38 |||||||||||||||||||| Sbjct: 63745 cagcccacacaccaccacat 63726
>emb|AL606479.16| Mouse DNA sequence from clone RP23-10G21 on chromosome 11 Contains the Scgb3a1 gene for family 3A member 1 secretoglobin, gene A230103N10Rik, a ribosomal protein L30 (Rpl30) pseudogene, a ribosomal protein S10 (Rps10) pseudogene, a ribosomal protein L29 (Rpl29) pseudogene, the Gfpt2 gene for glutamine fructose-6-phosphate transaminase 2, the Mapk9 gene for mitogen activated protein kinase 9, the 5' end of gene 9130006A14Rik and four CpG islands, complete sequence Length = 254981 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 364 gaggaaggagaaaggtgtga 383 |||||||||||||||||||| Sbjct: 4264 gaggaaggagaaaggtgtga 4245
>emb|AJ720375.1| Gallus gallus mRNA for hypothetical protein, clone 16f17 Length = 4963 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 122 aggagtaccacgaggcatgg 141 |||||||||||||||||||| Sbjct: 773 aggagtaccacgaggcatgg 754
>gb|AC079018.10| Homo sapiens chromosome 8, clone RP11-161B1, complete sequence Length = 168702 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 364 gaggaaggagaaaggtgtga 383 |||||||||||||||||||| Sbjct: 12621 gaggaaggagaaaggtgtga 12640
>dbj|AK127831.1| Homo sapiens cDNA FLJ45934 fis, clone PLACE7003684 Length = 3658 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 364 gaggaaggagaaaggtgtga 383 |||||||||||||||||||| Sbjct: 3560 gaggaaggagaaaggtgtga 3579
>gb|AY772251.1| Chondrus crispus chloroplast phosphoribulokinase (PRK) mRNA, complete cds; nuclear gene for chloroplast product Length = 1427 Score = 40.1 bits (20), Expect = 8.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 531 tcgtcatcgagggtttgcacccaatgtatgac 562 ||||||||||||| ||||||| ||||||||| Sbjct: 490 tcgtcatcgagggcctgcaccccatgtatgac 521
>dbj|BA000037.2| Vibrio vulnificus YJ016 DNA, chromosome I, complete sequence Length = 3354505 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 428 caagtgaaggcaatcaaagaaggc 451 |||||||||||||| ||||||||| Sbjct: 2795236 caagtgaaggcaattaaagaaggc 2795213
>dbj|AK134202.1| Mus musculus adult male thymus cDNA, RIKEN full-length enriched library, clone:5830472K17 product:hypothetical protein, full insert sequence Length = 2783 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 180 caatagtgattggcctggca 199 |||||||||||||||||||| Sbjct: 892 caatagtgattggcctggca 873
>gb|AC068721.4| Homo sapiens BAC clone RP11-545L5 from 4, complete sequence Length = 177270 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 109 cagaagcagcaggaggagta 128 |||||||||||||||||||| Sbjct: 137439 cagaagcagcaggaggagta 137458
>gb|AC153823.5| Mus musculus 10 BAC RP23-11M21 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 210101 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 ccaagtcatcctcttcacaa 107 |||||||||||||||||||| Sbjct: 79373 ccaagtcatcctcttcacaa 79392
>emb|BX930986.2| Gallus gallus finished cDNA, clone ChEST68e2 Length = 3166 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 122 aggagtaccacgaggcatgg 141 |||||||||||||||||||| Sbjct: 737 aggagtaccacgaggcatgg 718
>dbj|AK003988.1| Mus musculus 18-day embryo whole body cDNA, RIKEN full-length enriched library, clone:1110030K16 product:uteroglobin related protein 2, full insert sequence Length = 495 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 364 gaggaaggagaaaggtgtga 383 |||||||||||||||||||| Sbjct: 466 gaggaaggagaaaggtgtga 447
>gb|AC021849.5| Homo sapiens BAC clone RP11-366G5 from 2, complete sequence Length = 168710 Score = 40.1 bits (20), Expect = 8.7 Identities = 29/32 (90%) Strand = Plus / Minus Query: 433 gaaggcaatcaaagaaggcaaggctattgaga 464 ||||||||| || |||||||||||| |||||| Sbjct: 12251 gaaggcaatgaaggaaggcaaggcttttgaga 12220
>emb|Z72338.1|HSV1KOS Herpes simplex virus type 1 (strain KOS) UL41 gene Length = 1622 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 478 ccacgtcactggcctcctcg 497 |||||||||||||||||||| Sbjct: 394 ccacgtcactggcctcctcg 375
>gb|AF313457.1| Mus musculus UGRP2 type B mRNA, complete cds Length = 630 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 364 gaggaaggagaaaggtgtga 383 |||||||||||||||||||| Sbjct: 569 gaggaaggagaaaggtgtga 550
>gb|AF313456.1| Mus musculus UGRP2 type A mRNA, complete cds Length = 525 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 364 gaggaaggagaaaggtgtga 383 |||||||||||||||||||| Sbjct: 464 gaggaaggagaaaggtgtga 445
>gb|AC116680.21| Mus musculus chromosome 12, clone RP23-476M16, complete sequence Length = 215303 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 180 caatagtgattggcctggca 199 |||||||||||||||||||| Sbjct: 45836 caatagtgattggcctggca 45817
>gb|AF007815.1|AF007815 Human herpesvirus 1 strain KOS virion host shutoff protein (UL41) gene, complete cds Length = 2172 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 478 ccacgtcactggcctcctcg 497 |||||||||||||||||||| Sbjct: 440 ccacgtcactggcctcctcg 421
>emb|CT010478.15| Mouse DNA sequence from clone RP23-356E7 on chromosome 12, complete sequence Length = 190917 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 180 caatagtgattggcctggca 199 |||||||||||||||||||| Sbjct: 74482 caatagtgattggcctggca 74463
>ref|NM_054037.1| Mus musculus secretoglobin, family 3A, member 1 (Scgb3a1), transcript variant A, mRNA Length = 525 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 364 gaggaaggagaaaggtgtga 383 |||||||||||||||||||| Sbjct: 464 gaggaaggagaaaggtgtga 445
>ref|NM_170727.1| Mus musculus secretoglobin, family 3A, member 1 (Scgb3a1), transcript variant B, mRNA Length = 630 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 364 gaggaaggagaaaggtgtga 383 |||||||||||||||||||| Sbjct: 569 gaggaaggagaaaggtgtga 550
>dbj|AB009267.1| Human herpesvirus 1 UL41 gene for tegument protein, complete cds, strain:VR-3 Length = 1470 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 478 ccacgtcactggcctcctcg 497 |||||||||||||||||||| Sbjct: 346 ccacgtcactggcctcctcg 327 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,435,984 Number of Sequences: 3902068 Number of extensions: 5435984 Number of successful extensions: 117138 Number of sequences better than 10.0: 74 Number of HSP's better than 10.0 without gapping: 74 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 116867 Number of HSP's gapped (non-prelim): 263 length of query: 637 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 614 effective length of database: 17,143,297,704 effective search space: 10525984790256 effective search space used: 10525984790256 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
