Clone Information

BLAST Search Result

Clone Name	baal23n15
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	ref\|XM_470038.1\| Oryza sativa (japonica cultivar-group), mRNA	194	2e-46
2	dbj\|AK070287.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	194	2e-46
3	dbj\|AK060962.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	194	2e-46
4	gb\|DP000009.1\| Oryza sativa (japonica cultivar-group) chromosome 3	129	1e-26
5	gb\|AC135958.2\| Oryza sativa chromosome 3 BAC OSJNBa0059E14 genom...	129	1e-26
6	dbj\|AP008209.1\| Oryza sativa (japonica cultivar-group) genomic D...	129	1e-26
7	ref\|XM_478766.1\| Oryza sativa (japonica cultivar-group), mRNA	58	3e-05
8	dbj\|AK067599.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	58	3e-05
9	ref\|NM_121991.2\| Arabidopsis thaliana unknown protein AT5G19855 ...	46	0.12
10	gb\|CP000133.1\| Rhizobium etli CFN 42, complete genome	46	0.12
11	gb\|BT005149.1\| Arabidopsis thaliana clone U20491 unknown protein...	46	0.12
12	gb\|BT004014.1\| Arabidopsis thaliana clone RAFL15-10-J17 (R20491)...	46	0.12
13	gb\|AY088169.1\| Arabidopsis thaliana clone 42402 mRNA, complete s...	46	0.12
14	gb\|L77117.1\| Methanocaldococcus jannaschii DSM 2661, complete ge...	44	0.46
15	gb\|AY020312.1\| Oryza sativa microsatellite MRG2637 containing (G...	42	1.8
16	emb\|BX957235.12\| Zebrafish DNA sequence from clone DKEY-84K17 in...	42	1.8
17	gb\|AC165343.3\| Mus musculus BAC clone RP23-476C24 from chromosom...	42	1.8
18	emb\|AL607001.4\|OSJN00128 Oryza sativa genomic DNA, chromosome 4,...	42	1.8
19	gb\|AC164561.2\| Mus musculus BAC clone RP23-187G5 from chromosome...	42	1.8
20	dbj\|AK055547.1\| Homo sapiens cDNA FLJ30985 fis, clone HHDPC2000462	42	1.8
21	dbj\|AP008210.1\| Oryza sativa (japonica cultivar-group) genomic D...	42	1.8
22	dbj\|AP008212.1\| Oryza sativa (japonica cultivar-group) genomic D...	42	1.8
23	dbj\|AP008208.1\| Oryza sativa (japonica cultivar-group) genomic D...	42	1.8
24	dbj\|AP005116.3\| Oryza sativa (japonica cultivar-group) genomic D...	42	1.8
25	dbj\|AP003708.2\| Oryza sativa (japonica cultivar-group) genomic D...	42	1.8
26	emb\|CT033780.10\| Mouse DNA sequence from clone RP24-329E14 on ch...	42	1.8
27	ref\|XM_520379.1\| PREDICTED: Pan troglodytes LOC464874 (LOC464874...	40	7.1
28	gb\|AC158556.9\| Mus musculus chromosome 15, clone RP23-140F20, co...	40	7.1
29	emb\|Z78541.1\|CEF19D8 Caenorhabditis elegans Cosmid F19D8, comple...	40	7.1
30	gb\|AC116033.3\| Zea mays genomic clone ZM15C05 sequence, complete...	40	7.1
31	gb\|BC064582.1\| Homo sapiens KIAA1984, mRNA (cDNA clone IMAGE:574...	40	7.1
32	emb\|AL355987.31\| Human DNA sequence from clone RP11-216L13 on ch...	40	7.1
33	ref\|XM_779451.1\| PREDICTED: Strongylocentrotus purpuratus simila...	40	7.1
34	emb\|AL731600.3\|OSJN00243 Oryza sativa genomic DNA, chromosome 4,...	40	7.1
35	emb\|AL606621.3\|OSJN00054 Oryza sativa genomic DNA, chromosome 4,...	40	7.1
36	emb\|AL731658.20\| Mouse DNA sequence from clone RP23-329P17 on ch...	40	7.1
37	gb\|AC023102.6\| Homo sapiens chromosome 8, clone RP11-414L17, com...	40	7.1
38	dbj\|AK094220.1\| Homo sapiens cDNA FLJ36901 fis, clone BRACE2002206	40	7.1
39	dbj\|AK092639.1\| Homo sapiens cDNA FLJ35320 fis, clone PROST2012007	40	7.1
40	dbj\|AK090683.1\| Homo sapiens cDNA FLJ33364 fis, clone BRACE2005448	40	7.1
41	gb\|AC112173.3\| Homo sapiens chromosome 5 clone CTD-2275D10, comp...	40	7.1
42	ref\|NM_001039374.3\| Homo sapiens KIAA1984 (KIAA1984), mRNA	40	7.1
43	gb\|AC113143.3\| Homo sapiens chromosome 8, clone RP11-33I11, comp...	40	7.1
44	gb\|AC093251.2\| Homo sapiens chromosome 5 clone RP11-156N15, comp...	40	7.1
45	dbj\|AK154298.1\| Mus musculus NOD-derived CD11c +ve dendritic cel...	40	7.1
46	dbj\|AP008218.1\| Oryza sativa (japonica cultivar-group) genomic D...	40	7.1
47	dbj\|AB074447.1\| Macaca fascicularis testis cDNA clone:QtsA-19877...	40	7.1
48	dbj\|AP004730.2\| Oryza sativa (japonica cultivar-group) genomic D...	40	7.1
49	dbj\|AP004328.2\| Oryza sativa (japonica cultivar-group) genomic D...	40	7.1
50	emb\|BX469898.9\| Zebrafish DNA sequence from clone DKEY-180H12 in...	40	7.1
51	gb\|AY107170.1\| Zea mays PCO088271 mRNA sequence	40	7.1
52	gb\|DP000011.1\| Oryza sativa (japonica cultivar-group) chromosome...	40	7.1
53	emb\|AL772426.5\|CNS08CA4 Oryza sativa chromosome 12, . BAC OJ1310...	40	7.1
54	emb\|AL772358.6\| Mouse DNA sequence from clone RP23-397K2 on chro...	40	7.1
55	dbj\|AB075864.1\| Homo sapiens mRNA for KIAA1984 protein	40	7.1

>ref|XM_470038.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1001

 Score =  194 bits (98), Expect = 2e-46
 Identities = 158/178 (88%)
 Strand = Plus / Plus

                                                                       
Query: 2   gcttgcagagcgagtgatgataaccaggcttagcttgtacgggaaatggatcaagaagtg 61
           |||||||||||||||||||||||| ||||||  ||||||| | |||||||||||||| ||
Sbjct: 432 gcttgcagagcgagtgatgataactaggcttcacttgtacagcaaatggatcaagaaatg 491

                                                                       
Query: 62  cgaccacgcgaagatgtacgagaagatctcggaggagaacctggagctgatgcgggagag 121
            ||||| |||| ||||||||||| ||| || || |||||||||| | ||||||| ||| |
Sbjct: 492 tgaccatgcgatgatgtacgagaggatatctgacgagaacctggcgttgatgcgagagcg 551

                                                                     
Query: 122 gctcatggagacggtcatctggccaaccgacgacaccaacacggagaagatcggctga 179
           ||||||||||||||||||||||||||| |||||||||||||| |||||||| ||||||
Sbjct: 552 gctcatggagacggtcatctggccaacagacgacaccaacactgagaagattggctga 609

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>dbj|AK070287.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023049O16, full
           insert sequence
          Length = 983

 Score =  194 bits (98), Expect = 2e-46
 Identities = 158/178 (88%)
 Strand = Plus / Plus

                                                                       
Query: 2   gcttgcagagcgagtgatgataaccaggcttagcttgtacgggaaatggatcaagaagtg 61
           |||||||||||||||||||||||| ||||||  ||||||| | |||||||||||||| ||
Sbjct: 562 gcttgcagagcgagtgatgataactaggcttcacttgtacagcaaatggatcaagaaatg 621

                                                                       
Query: 62  cgaccacgcgaagatgtacgagaagatctcggaggagaacctggagctgatgcgggagag 121
            ||||| |||| ||||||||||| ||| || || |||||||||| | ||||||| ||| |
Sbjct: 622 tgaccatgcgatgatgtacgagaggatatctgacgagaacctggcgttgatgcgagagcg 681

                                                                     
Query: 122 gctcatggagacggtcatctggccaaccgacgacaccaacacggagaagatcggctga 179
           ||||||||||||||||||||||||||| |||||||||||||| |||||||| ||||||
Sbjct: 682 gctcatggagacggtcatctggccaacagacgacaccaacactgagaagattggctga 739

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>dbj|AK060962.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-202-A06, full
           insert sequence
          Length = 1220

 Score =  194 bits (98), Expect = 2e-46
 Identities = 158/178 (88%)
 Strand = Plus / Plus

                                                                       
Query: 2   gcttgcagagcgagtgatgataaccaggcttagcttgtacgggaaatggatcaagaagtg 61
           |||||||||||||||||||||||| ||||||  ||||||| | |||||||||||||| ||
Sbjct: 664 gcttgcagagcgagtgatgataactaggcttcacttgtacagcaaatggatcaagaaatg 723

                                                                       
Query: 62  cgaccacgcgaagatgtacgagaagatctcggaggagaacctggagctgatgcgggagag 121
            ||||| |||| ||||||||||| ||| || || |||||||||| | ||||||| ||| |
Sbjct: 724 tgaccatgcgatgatgtacgagaggatatctgacgagaacctggcgttgatgcgagagcg 783

                                                                     
Query: 122 gctcatggagacggtcatctggccaaccgacgacaccaacacggagaagatcggctga 179
           ||||||||||||||||||||||||||| |||||||||||||| |||||||| ||||||
Sbjct: 784 gctcatggagacggtcatctggccaacagacgacaccaacactgagaagattggctga 841

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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  129 bits (65), Expect = 1e-26
 Identities = 104/117 (88%)
 Strand = Plus / Plus

                                                                            
Query: 63       gaccacgcgaagatgtacgagaagatctcggaggagaacctggagctgatgcgggagagg 122
                ||||| |||| ||||||||||| ||| || || |||||||||| | ||||||| ||| ||
Sbjct: 33469162 gaccatgcgatgatgtacgagaggatatctgacgagaacctggcgttgatgcgagagcgg 33469221

                                                                         
Query: 123      ctcatggagacggtcatctggccaaccgacgacaccaacacggagaagatcggctga 179
                |||||||||||||||||||||||||| |||||||||||||| |||||||| ||||||
Sbjct: 33469222 ctcatggagacggtcatctggccaacagacgacaccaacactgagaagattggctga 33469278



 Score = 69.9 bits (35), Expect = 8e-09
 Identities = 50/55 (90%)
 Strand = Plus / Plus

                                                                       
Query: 2        gcttgcagagcgagtgatgataaccaggcttagcttgtacgggaaatggatcaag 56
                |||||||||||||||||||||||| ||||||  ||||||| | ||||||||||||
Sbjct: 33469016 gcttgcagagcgagtgatgataactaggcttcacttgtacagcaaatggatcaag 33469070

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>gb|AC135958.2| Oryza sativa chromosome 3 BAC OSJNBa0059E14 genomic sequence, complete
             sequence
          Length = 154555

 Score =  129 bits (65), Expect = 1e-26
 Identities = 104/117 (88%)
 Strand = Plus / Minus

                                                                         
Query: 63    gaccacgcgaagatgtacgagaagatctcggaggagaacctggagctgatgcgggagagg 122
             ||||| |||| ||||||||||| ||| || || |||||||||| | ||||||| ||| ||
Sbjct: 28949 gaccatgcgatgatgtacgagaggatatctgacgagaacctggcgttgatgcgagagcgg 28890

                                                                      
Query: 123   ctcatggagacggtcatctggccaaccgacgacaccaacacggagaagatcggctga 179
             |||||||||||||||||||||||||| |||||||||||||| |||||||| ||||||
Sbjct: 28889 ctcatggagacggtcatctggccaacagacgacaccaacactgagaagattggctga 28833



 Score = 69.9 bits (35), Expect = 8e-09
 Identities = 50/55 (90%)
 Strand = Plus / Minus

                                                                    
Query: 2     gcttgcagagcgagtgatgataaccaggcttagcttgtacgggaaatggatcaag 56
             |||||||||||||||||||||||| ||||||  ||||||| | ||||||||||||
Sbjct: 29095 gcttgcagagcgagtgatgataactaggcttcacttgtacagcaaatggatcaag 29041

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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  129 bits (65), Expect = 1e-26
 Identities = 104/117 (88%)
 Strand = Plus / Plus

                                                                            
Query: 63       gaccacgcgaagatgtacgagaagatctcggaggagaacctggagctgatgcgggagagg 122
                ||||| |||| ||||||||||| ||| || || |||||||||| | ||||||| ||| ||
Sbjct: 33559672 gaccatgcgatgatgtacgagaggatatctgacgagaacctggcgttgatgcgagagcgg 33559731

                                                                         
Query: 123      ctcatggagacggtcatctggccaaccgacgacaccaacacggagaagatcggctga 179
                |||||||||||||||||||||||||| |||||||||||||| |||||||| ||||||
Sbjct: 33559732 ctcatggagacggtcatctggccaacagacgacaccaacactgagaagattggctga 33559788



 Score = 69.9 bits (35), Expect = 8e-09
 Identities = 50/55 (90%)
 Strand = Plus / Plus

                                                                       
Query: 2        gcttgcagagcgagtgatgataaccaggcttagcttgtacgggaaatggatcaag 56
                |||||||||||||||||||||||| ||||||  ||||||| | ||||||||||||
Sbjct: 33559526 gcttgcagagcgagtgatgataactaggcttcacttgtacagcaaatggatcaag 33559580

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>ref|XM_478766.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 821

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 62/73 (84%)
 Strand = Plus / Plus

                                                                       
Query: 35  cttgtacgggaaatggatcaagaagtgcgaccacgcgaagatgtacgagaagatctcgga 94
           ||||||| | |||||||||||||| || ||||| || || |||||||||||||| ||| |
Sbjct: 499 cttgtacagcaaatggatcaagaaatgtgaccatgcaaaaatgtacgagaagatttcgaa 558

                        
Query: 95  ggagaacctggag 107
            ||||| ||||||
Sbjct: 559 tgagaatctggag 571

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>dbj|AK067599.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013109B01, full
           insert sequence
          Length = 820

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 62/73 (84%)
 Strand = Plus / Plus

                                                                       
Query: 35  cttgtacgggaaatggatcaagaagtgcgaccacgcgaagatgtacgagaagatctcgga 94
           ||||||| | |||||||||||||| || ||||| || || |||||||||||||| ||| |
Sbjct: 498 cttgtacagcaaatggatcaagaaatgtgaccatgcaaaaatgtacgagaagatttcgaa 557

                        
Query: 95  ggagaacctggag 107
            ||||| ||||||
Sbjct: 558 tgagaatctggag 570

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>ref|NM_121991.2| Arabidopsis thaliana unknown protein AT5G19855 mRNA, complete cds
          Length = 941

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 62/75 (82%)
 Strand = Plus / Plus

                                                                       
Query: 2   gcttgcagagcgagtgatgataaccaggcttagcttgtacgggaaatggatcaagaagtg 61
           |||||||||  |||||||||| ||  | |||  |||||| || |||||||||||||| ||
Sbjct: 579 gcttgcagaaagagtgatgatcacgcgtcttcacttgtatggcaaatggatcaagaaatg 638

                          
Query: 62  cgaccacgcgaagat 76
           |||||| | ||||||
Sbjct: 639 cgaccatgggaagat 653

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>gb|CP000133.1| Rhizobium etli CFN 42, complete genome
          Length = 4381608

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                      
Query: 91      cggaggagaacctggagctgatg 113
               |||||||||||||||||||||||
Sbjct: 2436946 cggaggagaacctggagctgatg 2436924

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>gb|BT005149.1| Arabidopsis thaliana clone U20491 unknown protein (At5g19855) mRNA,
           complete cds
          Length = 643

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 62/75 (82%)
 Strand = Plus / Plus

                                                                       
Query: 2   gcttgcagagcgagtgatgataaccaggcttagcttgtacgggaaatggatcaagaagtg 61
           |||||||||  |||||||||| ||  | |||  |||||| || |||||||||||||| ||
Sbjct: 444 gcttgcagaaagagtgatgatcacgcgtcttcacttgtatggcaaatggatcaagaaatg 503

                          
Query: 62  cgaccacgcgaagat 76
           |||||| | ||||||
Sbjct: 504 cgaccatgggaagat 518

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>gb|BT004014.1| Arabidopsis thaliana clone RAFL15-10-J17 (R20491) unknown protein
           (At5g19855) mRNA, complete cds
          Length = 926

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 62/75 (82%)
 Strand = Plus / Plus

                                                                       
Query: 2   gcttgcagagcgagtgatgataaccaggcttagcttgtacgggaaatggatcaagaagtg 61
           |||||||||  |||||||||| ||  | |||  |||||| || |||||||||||||| ||
Sbjct: 546 gcttgcagaaagagtgatgatcacgcgtcttcacttgtatggcaaatggatcaagaaatg 605

                          
Query: 62  cgaccacgcgaagat 76
           |||||| | ||||||
Sbjct: 606 cgaccatgggaagat 620

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>gb|AY088169.1| Arabidopsis thaliana clone 42402 mRNA, complete sequence
          Length = 939

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 62/75 (82%)
 Strand = Plus / Plus

                                                                       
Query: 2   gcttgcagagcgagtgatgataaccaggcttagcttgtacgggaaatggatcaagaagtg 61
           |||||||||  |||||||||| ||  | |||  |||||| || |||||||||||||| ||
Sbjct: 579 gcttgcagaaagagtgatgatcacgcgtcttcacttgtatggcaaatggatcaagaaatg 638

                          
Query: 62  cgaccacgcgaagat 76
           |||||| | ||||||
Sbjct: 639 cgaccatgggaagat 653

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>gb|L77117.1| Methanocaldococcus jannaschii DSM 2661, complete genome
          Length = 1664970

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 92     ggaggagaacctggagctgatg 113
              ||||||||||||||||||||||
Sbjct: 314993 ggaggagaacctggagctgatg 315014

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>gb|AY020312.1| Oryza sativa microsatellite MRG2637 containing (GA)X13, genomic
           sequence
          Length = 226

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 102 ctggagctgatgcgggagagg 122
           |||||||||||||||||||||
Sbjct: 44  ctggagctgatgcgggagagg 24

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>emb|BX957235.12| Zebrafish DNA sequence from clone DKEY-84K17 in linkage group 17,
            complete sequence
          Length = 171764

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 291  tcaaacatgtgtatataatgt 311
            |||||||||||||||||||||
Sbjct: 9681 tcaaacatgtgtatataatgt 9661

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>gb|AC165343.3| Mus musculus BAC clone RP23-476C24 from chromosome 17, complete
             sequence
          Length = 190724

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 263   actatgcatgcatgcacgcac 283
             |||||||||||||||||||||
Sbjct: 91801 actatgcatgcatgcacgcac 91781

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>emb|AL607001.4|OSJN00128 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0088I22,
             complete sequence
          Length = 164572

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 102   ctggagctgatgcgggagagg 122
             |||||||||||||||||||||
Sbjct: 33118 ctggagctgatgcgggagagg 33138

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>gb|AC164561.2| Mus musculus BAC clone RP23-187G5 from chromosome 12, complete sequence
          Length = 210186

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 265   tatgcatgcatgcacgcacga 285
             |||||||||||||||||||||
Sbjct: 20402 tatgcatgcatgcacgcacga 20422

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>dbj|AK055547.1| Homo sapiens cDNA FLJ30985 fis, clone HHDPC2000462
          Length = 2386

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 91  cggaggagaacctggagctga 111
           |||||||||||||||||||||
Sbjct: 666 cggaggagaacctggagctga 646

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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 102      ctggagctgatgcgggagagg 122
                |||||||||||||||||||||
Sbjct: 28757840 ctggagctgatgcgggagagg 28757820



 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 265      tatgcatgcatgcacgcacg 284
                ||||||||||||||||||||
Sbjct: 19360677 tatgcatgcatgcacgcacg 19360696

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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 102     ctggagctgatgcgggagagg 122
               |||||||||||||||||||||
Sbjct: 2075093 ctggagctgatgcgggagagg 2075073



 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 286      ttgagtcaaacatgtgtatataat 309
                ||||| ||||||||||||||||||
Sbjct: 19030435 ttgagacaaacatgtgtatataat 19030412

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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 264      ctatgcatgcatgcacgcacg 284
                |||||||||||||||||||||
Sbjct: 22090159 ctatgcatgcatgcacgcacg 22090139

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>dbj|AP005116.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0703B01
          Length = 137445

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 264   ctatgcatgcatgcacgcacg 284
             |||||||||||||||||||||
Sbjct: 64058 ctatgcatgcatgcacgcacg 64038

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>dbj|AP003708.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0041F13
          Length = 163230

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 102   ctggagctgatgcgggagagg 122
             |||||||||||||||||||||
Sbjct: 95955 ctggagctgatgcgggagagg 95935

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>emb|CT033780.10| Mouse DNA sequence from clone RP24-329E14 on chromosome 12, complete
              sequence
          Length = 205515

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 265    tatgcatgcatgcacgcacga 285
              |||||||||||||||||||||
Sbjct: 102661 tatgcatgcatgcacgcacga 102681

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>ref|XM_520379.1| PREDICTED: Pan troglodytes LOC464874 (LOC464874), mRNA
          Length = 2279

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 91   cggaggagaacctggagctg 110
            ||||||||||||||||||||
Sbjct: 1330 cggaggagaacctggagctg 1349

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>gb|AC158556.9| Mus musculus chromosome 15, clone RP23-140F20, complete sequence
          Length = 203053

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 298   tgtgtatataatgtacgtatgtga 321
             ||||||||||||||| ||||||||
Sbjct: 80004 tgtgtatataatgtatgtatgtga 79981

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>emb|Z78541.1|CEF19D8 Caenorhabditis elegans Cosmid F19D8, complete sequence
          Length = 29400

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 218  acttcatcaattaattagctcatc 241
            |||||||||||||||||| |||||
Sbjct: 1168 acttcatcaattaattagatcatc 1145

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>gb|AC116033.3| Zea mays genomic clone ZM15C05 sequence, complete sequence
          Length = 99606

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 368   tgcaaactgcttcgtgccattcgc 391
             |||| |||||||||||||||||||
Sbjct: 78870 tgcatactgcttcgtgccattcgc 78893

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>gb|BC064582.1| Homo sapiens KIAA1984, mRNA (cDNA clone IMAGE:5742861), complete cds
          Length = 1822

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 91   cggaggagaacctggagctg 110
            ||||||||||||||||||||
Sbjct: 1029 cggaggagaacctggagctg 1048

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>emb|AL355987.31| Human DNA sequence from clone RP11-216L13 on chromosome 9 Contains the
             3' end of the gene for a novel protein similar to mouse
             pancreatitis-induced protein 49  (PIP49), the 5' end of a
             novel gene (FLJ30346), five novel genes  (containing
             LOC158062, KIAA1984, FLJ35320, FLJ36901, FLJ30985,
             FLJ10101, FLJ37063 FLJ13045, FLJ40767), a nucleolin (NCL)
             pseudogene, the gene for a novel protein similar to mouse
             lipocalin 8 (EP17, Lcn5), a 13kD lysosomal H+ transporting
             ATPase V1 subunit G isoform 1 (ATP6V1G1) pseudogene, the
             gene for phosphohistidine phosphatase (PHP14), the gene
             for a novel protein similar to rat apical early endosomal
             glycoprotein (LOC252882), the EDF1 gene for endothelial
             differentiation-related factor 1 (MBF1, EDF-1), the 5' end
             of the TRAF2 gene for TNF receptor-associated factor 2
             (TRAP, TRAP3) and ten CpG islands, complete sequence
          Length = 182003

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 91    cggaggagaacctggagctg 110
             ||||||||||||||||||||
Sbjct: 84597 cggaggagaacctggagctg 84616

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>ref|XM_779451.1| PREDICTED: Strongylocentrotus purpuratus similar to potassium
            voltage-gated channel, subfamily H, member 8 (LOC579331),
            mRNA
          Length = 3177

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 154  acaccaacacggagaagatc 173
            ||||||||||||||||||||
Sbjct: 1307 acaccaacacggagaagatc 1326

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>emb|AL731600.3|OSJN00243 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0055C08,
              complete sequence
          Length = 145670

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 265    tatgcatgcatgcacgcacg 284
              ||||||||||||||||||||
Sbjct: 142509 tatgcatgcatgcacgcacg 142528

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>emb|AL606621.3|OSJN00054 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0072K14,
             complete sequence
          Length = 139855

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 265   tatgcatgcatgcacgcacg 284
             ||||||||||||||||||||
Sbjct: 11929 tatgcatgcatgcacgcacg 11948

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>emb|AL731658.20| Mouse DNA sequence from clone RP23-329P17 on chromosome 11 Contains the
              Lif gene for leukemia inhibitory factor, two novel genes,
              the 3' end of a novel gene and a CpG island, complete
              sequence
          Length = 137519

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 418    agtgtataatgtgcctgtgttctg 441
              ||||||||||||| ||||||||||
Sbjct: 130974 agtgtataatgtggctgtgttctg 130951

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>gb|AC023102.6| Homo sapiens chromosome 8, clone RP11-414L17, complete sequence
          Length = 175263

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 265    tatgcatgcatgcacgcacg 284
              ||||||||||||||||||||
Sbjct: 164486 tatgcatgcatgcacgcacg 164505

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>dbj|AK094220.1| Homo sapiens cDNA FLJ36901 fis, clone BRACE2002206
          Length = 2124

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 91  cggaggagaacctggagctg 110
           ||||||||||||||||||||
Sbjct: 464 cggaggagaacctggagctg 483

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>dbj|AK092639.1| Homo sapiens cDNA FLJ35320 fis, clone PROST2012007
          Length = 2323

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 91   cggaggagaacctggagctg 110
            ||||||||||||||||||||
Sbjct: 1301 cggaggagaacctggagctg 1320

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>dbj|AK090683.1| Homo sapiens cDNA FLJ33364 fis, clone BRACE2005448
          Length = 1555

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 91  cggaggagaacctggagctg 110
           ||||||||||||||||||||
Sbjct: 619 cggaggagaacctggagctg 638

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>gb|AC112173.3| Homo sapiens chromosome 5 clone CTD-2275D10, complete sequence
          Length = 125551

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 266   atgcatgcatgcacgcacgattga 289
             ||||||||||||||||| ||||||
Sbjct: 19251 atgcatgcatgcacgcaggattga 19274

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>ref|NM_001039374.3| Homo sapiens KIAA1984 (KIAA1984), mRNA
          Length = 1740

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 91   cggaggagaacctggagctg 110
            ||||||||||||||||||||
Sbjct: 1031 cggaggagaacctggagctg 1050

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>gb|AC113143.3| Homo sapiens chromosome 8, clone RP11-33I11, complete sequence
          Length = 157672

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 265   tatgcatgcatgcacgcacg 284
             ||||||||||||||||||||
Sbjct: 10828 tatgcatgcatgcacgcacg 10847

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>gb|AC093251.2| Homo sapiens chromosome 5 clone RP11-156N15, complete sequence
          Length = 62147

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 266  atgcatgcatgcacgcacgattga 289
            ||||||||||||||||| ||||||
Sbjct: 3573 atgcatgcatgcacgcaggattga 3550

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>dbj|AK154298.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN
            full-length enriched library, clone:F630016D06
            product:unclassifiable, full insert sequence
          Length = 4040

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 266  atgcatgcatgcacgcacga 285
            ||||||||||||||||||||
Sbjct: 2708 atgcatgcatgcacgcacga 2727

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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 265      tatgcatgcatgcacgcacg 284
                ||||||||||||||||||||
Sbjct: 24130019 tatgcatgcatgcacgcacg 24130000

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>dbj|AB074447.1| Macaca fascicularis testis cDNA clone:QtsA-19877, similar to human
            KIAA1984 protein (KIAA1984), mRNA, NM_032874
          Length = 2296

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 91   cggaggagaacctggagctg 110
            ||||||||||||||||||||
Sbjct: 1021 cggaggagaacctggagctg 1040

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>dbj|AP004730.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
              clone:OSJNBa0009J19
          Length = 156988

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 286    ttgagtcaaacatgtgtatataat 309
              ||||| ||||||||||||||||||
Sbjct: 123105 ttgagacaaacatgtgtatataat 123082

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>dbj|AP004328.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OJ1616_B03
          Length = 96081

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 286   ttgagtcaaacatgtgtatataat 309
             ||||| ||||||||||||||||||
Sbjct: 27919 ttgagacaaacatgtgtatataat 27896

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>emb|BX469898.9| Zebrafish DNA sequence from clone DKEY-180H12 in linkage group 18,
             complete sequence
          Length = 185729

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 266   atgcatgcatgcacgcacga 285
             ||||||||||||||||||||
Sbjct: 56073 atgcatgcatgcacgcacga 56092

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>gb|AY107170.1| Zea mays PCO088271 mRNA sequence
          Length = 637

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 38/44 (86%)
 Strand = Plus / Plus

                                                       
Query: 15  gtgatgataaccaggcttagcttgtacgggaaatggatcaagaa 58
           |||||| | |||||||||  | |||||||||||||||| |||||
Sbjct: 593 gtgatggtcaccaggcttcacctgtacgggaaatggataaagaa 636

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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 265      tatgcatgcatgcacgcacg 284
                ||||||||||||||||||||
Sbjct: 24058225 tatgcatgcatgcacgcacg 24058206

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>emb|AL772426.5|CNS08CA4 Oryza sativa chromosome 12, . BAC OJ1310_C03 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 132733

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 265   tatgcatgcatgcacgcacg 284
             ||||||||||||||||||||
Sbjct: 14710 tatgcatgcatgcacgcacg 14691

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>emb|AL772358.6| Mouse DNA sequence from clone RP23-397K2 on chromosome 4, complete
             sequence
          Length = 173518

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 266   atgcatgcatgcacgcacga 285
             ||||||||||||||||||||
Sbjct: 87677 atgcatgcatgcacgcacga 87658

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>dbj|AB075864.1| Homo sapiens mRNA for KIAA1984 protein
          Length = 4207

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 91   cggaggagaacctggagctg 110
            ||||||||||||||||||||
Sbjct: 1144 cggaggagaacctggagctg 1163


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,621,560
Number of Sequences: 3902068
Number of extensions: 3621560
Number of successful extensions: 73344
Number of sequences better than 10.0: 55
Number of HSP's better than 10.0 without gapping: 57
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 72867
Number of HSP's gapped (non-prelim): 473
length of query: 528
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 505
effective length of database: 17,143,297,704
effective search space: 8657365340520
effective search space used: 8657365340520
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result