>CRD1_HORVU (Q5EFU4) Magnesium-protoporphyrin IX monomethyl ester [oxidative]|
           cyclase, chloroplast precursor (EC 1.14.13.81)
           (Mg-protoporphyrin IX monomethyl ester oxidative
           cyclase) (Protein Xantha-l)
          Length = 417

 Score = 92.4 bits (228), Expect = 3e-19
 Identities = 46/47 (97%), Positives = 47/47 (100%)
 Frame = +2

Query: 8   HDLPLVKNLKRVPLIAQLVSEIIAAYLMPPIESGSVDFAEFEPKLVY 148
           +DLPLVKNLKRVPLIAQLVSEIIAAYLMPPIESGSVDFAEFEPKLVY
Sbjct: 371 NDLPLVKNLKRVPLIAQLVSEIIAAYLMPPIESGSVDFAEFEPKLVY 417

>CRD1_GOSHI (Q6SJV8) Magnesium-protoporphyrin IX monomethyl ester [oxidative]|
           cyclase, chloroplast precursor (EC 1.14.13.81)
           (Mg-protoporphyrin IX monomethyl ester oxidative
           cyclase)
          Length = 405

 Score = 82.4 bits (202), Expect = 3e-16
 Identities = 38/46 (82%), Positives = 43/46 (93%)
 Frame = +2

Query: 11  DLPLVKNLKRVPLIAQLVSEIIAAYLMPPIESGSVDFAEFEPKLVY 148
           D+PLVKNLKR+PLIA L SE++A YLMPPIESGSVDFAEFEP+LVY
Sbjct: 360 DIPLVKNLKRIPLIAALASELLATYLMPPIESGSVDFAEFEPQLVY 405

>CRD1_EUPES (Q945B7) Magnesium-protoporphyrin IX monomethyl ester [oxidative]|
           cyclase, chloroplast precursor (EC 1.14.13.81)
           (Mg-protoporphyrin IX monomethyl ester oxidative
           cyclase)
          Length = 405

 Score = 82.0 bits (201), Expect = 4e-16
 Identities = 41/46 (89%), Positives = 43/46 (93%)
 Frame = +2

Query: 11  DLPLVKNLKRVPLIAQLVSEIIAAYLMPPIESGSVDFAEFEPKLVY 148
           D  +VKNLKRVPLIA LVSEI+AAYLMPPIESGSVDFAEFEPKLVY
Sbjct: 360 DNSVVKNLKRVPLIAALVSEILAAYLMPPIESGSVDFAEFEPKLVY 405

>CRD1_ARATH (Q9M591) Magnesium-protoporphyrin IX monomethyl ester [oxidative]|
           cyclase, chloroplast precursor (EC 1.14.13.81)
           (Mg-protoporphyrin IX monomethyl ester oxidative
           cyclase) (Copper response defect 1 protein)
           (Dicarboxylate diiron protein) (AtZIP
          Length = 409

 Score = 73.9 bits (180), Expect = 1e-13
 Identities = 33/46 (71%), Positives = 38/46 (82%)
 Frame = +2

Query: 11  DLPLVKNLKRVPLIAQLVSEIIAAYLMPPIESGSVDFAEFEPKLVY 148
           D   +K LKR+PL+  L SEI+AAYLMPP+ESGSVDFAEFEP LVY
Sbjct: 364 DASFIKTLKRIPLVTSLASEILAAYLMPPVESGSVDFAEFEPNLVY 409

>CTH1_CHLRE (Q9AR22) Magnesium-protoporphyrin IX monomethyl ester [oxidative]|
           cyclase 2, chloroplast precursor (EC 1.14.13.81)
           (Mg-protoporphyrin IX monomethyl ester oxidative cyclase
           2) (Copper target homolog 1 protein)
          Length = 407

 Score = 35.0 bits (79), Expect = 0.053
 Identities = 14/42 (33%), Positives = 26/42 (61%)
 Frame = +2

Query: 23  VKNLKRVPLIAQLVSEIIAAYLMPPIESGSVDFAEFEPKLVY 148
           +K + + P++ ++V+E+   ++M P ESGS D    +  LVY
Sbjct: 366 IKAIMKAPILERMVAEVFQVFIMTPKESGSYDLDANKTALVY 407

>ACSF_PORPU (P51277) Magnesium-protoporphyrin IX monomethyl ester [oxidative]|
           cyclase (EC 1.14.13.81) (Mg-protoporphyrin IX monomethyl
           ester oxidative cyclase)
          Length = 349

 Score = 31.6 bits (70), Expect = 0.58
 Identities = 14/33 (42%), Positives = 20/33 (60%)
 Frame = +2

Query: 17  PLVKNLKRVPLIAQLVSEIIAAYLMPPIESGSV 115
           PLVK   + PL   L+  +I  YL+ PI+S +V
Sbjct: 312 PLVKTFMKAPLYMSLILNLIKIYLIKPIDSQAV 344

>ACSF1_ANASP (Q8YX57) Magnesium-protoporphyrin IX monomethyl ester [oxidative]|
           cyclase 1 (EC 1.14.13.81) (Mg-protoporphyrin IX
           monomethyl ester oxidative cyclase 1)
          Length = 351

 Score = 28.5 bits (62), Expect = 4.9
 Identities = 11/28 (39%), Positives = 21/28 (75%)
 Frame = +2

Query: 23  VKNLKRVPLIAQLVSEIIAAYLMPPIES 106
           VK ++++PLIA +V  ++  YL+ PI++
Sbjct: 316 VKLIRKLPLIAAIVWNLLMVYLIKPIDT 343

>GRIPE_HUMAN (Q6GYQ0) GTPase-activating Rap/Ran-GAP domain-like 1|
           (GAP-related-interacting partner to E12) (GRIPE)
           (Tuberin-like protein 1)
          Length = 2036

 Score = 28.1 bits (61), Expect = 6.4
 Identities = 15/39 (38%), Positives = 21/39 (53%)
 Frame = -2

Query: 191 FVKIGRDESFFDKFSRQAWAQIRQNQRSQTRLGA*GTQR 75
           F K+  D+SF   +SR    Q    QRS T  G+ GT++
Sbjct: 707 FQKVSVDKSFSRGWSRDQPGQAPMRQRSATTTGSPGTEK 745

>GRIPE_MOUSE (Q6GYP7) GTPase-activating RapGAP domain-like 1|
           (GAP-related-interacting partner to E12) (GRIPE)
           (Tuberin-like protein 1)
          Length = 2035

 Score = 28.1 bits (61), Expect = 6.4
 Identities = 15/39 (38%), Positives = 21/39 (53%)
 Frame = -2

Query: 191 FVKIGRDESFFDKFSRQAWAQIRQNQRSQTRLGA*GTQR 75
           F K+  D+SF   +SR    Q    QRS T  G+ GT++
Sbjct: 706 FQKVSVDKSFSRGWSRDQPGQAPMRQRSATTTGSPGTEK 744


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 29,653,280
Number of Sequences: 219361
Number of extensions: 451350
Number of successful extensions: 1205
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1197
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1205
length of database: 80,573,946
effective HSP length: 50
effective length of database: 69,605,896
effective search space used: 1670541504
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)