ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal23l07 |
|---|---|
| Clone Library Name | barley_pub |
>UBE11_WHEAT (P20973) Ubiquitin-activating enzyme E1 1| Length = 1051 Score = 374 bits (959), Expect = e-103 Identities = 187/201 (93%), Positives = 190/201 (94%) Frame = +3 Query: 3 LSFILAAAILRAETFGIPIPEWAKTPNKLSAEAVDRVIVPDFQPKQGVKIVTDEKATSLX 182 LSFILAAAILRAETFGIPIPEWAKTPNKL+AEAVD+VIVPDFQPKQGVKIVT EKATSL Sbjct: 757 LSFILAAAILRAETFGIPIPEWAKTPNKLAAEAVDKVIVPDFQPKQGVKIVTHEKATSLS 816 Query: 183 XXXXXXXXXIEELIAKLEEISKTLPSGFHMNPIQFEKDDDTNFHMDVIAGFANMRARNYS 362 IEELIAKLEE+SKTLPSGFHMNPIQFEKDDDTNFHMDVIAGFANMRARNYS Sbjct: 817 SASVDDAAVIEELIAKLEEVSKTLPSGFHMNPIQFEKDDDTNFHMDVIAGFANMRARNYS 876 Query: 363 IPEVDKLKAKFIAGRIIPAIATSTAMATGLVCLELYKALAGGHKVEDYRNTFANLAIPLF 542 IPEVDKLKAKFIAGRIIPAIATSTAMATGLVCLELYKALAGGHKVEDYRNTFANLAIPLF Sbjct: 877 IPEVDKLKAKFIAGRIIPAIATSTAMATGLVCLELYKALAGGHKVEDYRNTFANLAIPLF 936 Query: 543 SIAEPVPPKTIKHQELSWTVW 605 SIAEPVPPKTIKHQELSWTVW Sbjct: 937 SIAEPVPPKTIKHQELSWTVW 957
>UBE12_WHEAT (P31251) Ubiquitin-activating enzyme E1 2| Length = 1051 Score = 373 bits (958), Expect = e-103 Identities = 187/201 (93%), Positives = 190/201 (94%) Frame = +3 Query: 3 LSFILAAAILRAETFGIPIPEWAKTPNKLSAEAVDRVIVPDFQPKQGVKIVTDEKATSLX 182 LSFILAAAILRAETFGIPI EWAKTPNKL+AEAVD+VIVPDFQPKQGVKIVTDEKATSL Sbjct: 757 LSFILAAAILRAETFGIPISEWAKTPNKLAAEAVDKVIVPDFQPKQGVKIVTDEKATSLS 816 Query: 183 XXXXXXXXXIEELIAKLEEISKTLPSGFHMNPIQFEKDDDTNFHMDVIAGFANMRARNYS 362 IEELIAKLEE+SKTLPSGFHMNPIQFEKDDDTNFHMDVIAGFANMRARNYS Sbjct: 817 SASVDDAAVIEELIAKLEEVSKTLPSGFHMNPIQFEKDDDTNFHMDVIAGFANMRARNYS 876 Query: 363 IPEVDKLKAKFIAGRIIPAIATSTAMATGLVCLELYKALAGGHKVEDYRNTFANLAIPLF 542 IPEVDKLKAKFIAGRIIPAIATSTAMATGLVCLELYKALAGGHKVEDYRNTFANLAIPLF Sbjct: 877 IPEVDKLKAKFIAGRIIPAIATSTAMATGLVCLELYKALAGGHKVEDYRNTFANLAIPLF 936 Query: 543 SIAEPVPPKTIKHQELSWTVW 605 SIAEPVPPKTIKHQELSWTVW Sbjct: 937 SIAEPVPPKTIKHQELSWTVW 957
>UBE13_WHEAT (P31252) Ubiquitin-activating enzyme E1 3| Length = 1053 Score = 299 bits (765), Expect = 5e-81 Identities = 146/201 (72%), Positives = 171/201 (85%) Frame = +3 Query: 3 LSFILAAAILRAETFGIPIPEWAKTPNKLSAEAVDRVIVPDFQPKQGVKIVTDEKATSLX 182 L+FI++A+ILRAE+FG+ IPEWAK +KL A+ V+++ VP F+PKQGV IVTDEKA++L Sbjct: 760 LNFIMSASILRAESFGVAIPEWAKDTSKL-ADVVNKIAVPTFEPKQGVNIVTDEKASNLS 818 Query: 183 XXXXXXXXXIEELIAKLEEISKTLPSGFHMNPIQFEKDDDTNFHMDVIAGFANMRARNYS 362 IE+L+AKL+E +K L GF M PIQFEKDDDTNFHMD+I+G ANMRARNYS Sbjct: 819 STSVDDVAVIEDLLAKLQEYAKMLLPGFQMKPIQFEKDDDTNFHMDLISGLANMRARNYS 878 Query: 363 IPEVDKLKAKFIAGRIIPAIATSTAMATGLVCLELYKALAGGHKVEDYRNTFANLAIPLF 542 IPEVDKLKAKFIAGRIIPAIATSTAMATGLVCLELYK +AG H VEDYRNTFANLA+PLF Sbjct: 879 IPEVDKLKAKFIAGRIIPAIATSTAMATGLVCLELYKVIAGEHPVEDYRNTFANLALPLF 938 Query: 543 SIAEPVPPKTIKHQELSWTVW 605 S+AEPVPPK +KH+E SWTVW Sbjct: 939 SMAEPVPPKVMKHKETSWTVW 959
>UBE1_HUMAN (P22314) Ubiquitin-activating enzyme E1 (A1S9 protein)| Length = 1058 Score = 166 bits (419), Expect = 6e-41 Identities = 91/207 (43%), Positives = 123/207 (59%), Gaps = 6/207 (2%) Frame = +3 Query: 3 LSFILAAAILRAETFGIPIPEWAKTPNKLSAEAVDRVIVPDFQPKQGVKI-VTDEKATSL 179 L +++AAA L A+T+G+ A + V VP+F PK GVKI V+D++ S Sbjct: 762 LDYVMAAANLFAQTYGLT----GSQDRAAVATFLQSVQVPEFTPKSGVKIHVSDQELQSA 817 Query: 180 XXXXXXXXXXIEELIAKLEEISKTLPS-----GFHMNPIQFEKDDDTNFHMDVIAGFANM 344 ++LEE+ TLPS GF M PI FEKDDD+NFHMD I +N+ Sbjct: 818 NASVDD---------SRLEELKATLPSPDKLPGFKMYPIDFEKDDDSNFHMDFIVAASNL 868 Query: 345 RARNYSIPEVDKLKAKFIAGRIIPAIATSTAMATGLVCLELYKALAGGHKVEDYRNTFAN 524 RA NY IP D+ K+K IAG+IIPAIAT+TA GLVCLELYK + G +++ Y+N F N Sbjct: 869 RAENYDIPSADRHKSKLIAGKIIPAIATTTAAVVGLVCLELYKVVQGHRQLDSYKNGFLN 928 Query: 525 LAIPLFSIAEPVPPKTIKHQELSWTVW 605 LA+P F +EP+ ++ WT+W Sbjct: 929 LALPFFGFSEPLAAPRHQYYNQEWTLW 955
>UBE1_RABIT (Q29504) Ubiquitin-activating enzyme E1| Length = 1058 Score = 165 bits (417), Expect = 1e-40 Identities = 91/207 (43%), Positives = 122/207 (58%), Gaps = 6/207 (2%) Frame = +3 Query: 3 LSFILAAAILRAETFGIPIPEWAKTPNKLSAEAVDRVIVPDFQPKQGVKI-VTDEKATSL 179 L +++AAA L A+T+G+ A + V VP+F PK GVKI V+D++ S Sbjct: 762 LDYVMAAANLFAQTYGLA----GSQDRAAVATLLQSVQVPEFTPKSGVKIHVSDQELQSA 817 Query: 180 XXXXXXXXXXIEELIAKLEEISKTLPS-----GFHMNPIQFEKDDDTNFHMDVIAGFANM 344 ++LEE+ TLPS GF M PI FEKDDD+NFHMD I +N+ Sbjct: 818 NASVDD---------SRLEELKATLPSPDKLPGFKMYPIDFEKDDDSNFHMDFIVAASNL 868 Query: 345 RARNYSIPEVDKLKAKFIAGRIIPAIATSTAMATGLVCLELYKALAGGHKVEDYRNTFAN 524 RA NY IP D+ K+K IAG+IIPAIAT+TA GLVCLELYK + G ++ Y+N F N Sbjct: 869 RAENYDIPPADRHKSKLIAGKIIPAIATTTAAVVGLVCLELYKVVQGHRHLDSYKNGFLN 928 Query: 525 LAIPLFSIAEPVPPKTIKHQELSWTVW 605 LA+P F +EP+ ++ WT+W Sbjct: 929 LALPFFGFSEPLAAPRHQYYNQEWTLW 955
>UBE1Y_MOUSE (P31254) Ubiquitin-activating enzyme E1 Y (Fragment)| Length = 442 Score = 164 bits (414), Expect = 2e-40 Identities = 87/201 (43%), Positives = 120/201 (59%) Frame = +3 Query: 3 LSFILAAAILRAETFGIPIPEWAKTPNKLSAEAVDRVIVPDFQPKQGVKIVTDEKATSLX 182 L +++AAA L A+T+G+ + KL + + VP F PK G++I E+ Sbjct: 145 LDYVMAAANLFAQTYGLGGSQDCAVVAKL----LQSLPVPKFAPKSGIRIHVSEQELQST 200 Query: 183 XXXXXXXXXIEELIAKLEEISKTLPSGFHMNPIQFEKDDDTNFHMDVIAGFANMRARNYS 362 +EEL L K L GF M PI FEKDDD+NFHMD I +N+RA NY Sbjct: 201 SATTIDDSHLEELKTALPTPDKLL--GFKMYPIDFEKDDDSNFHMDFIVAASNLRAENYG 258 Query: 363 IPEVDKLKAKFIAGRIIPAIATSTAMATGLVCLELYKALAGGHKVEDYRNTFANLAIPLF 542 I D+ K+K IAG+IIPAIAT+T+ GLVCLELYK + G ++E Y+N+F NLA+PLF Sbjct: 259 ISPADRHKSKLIAGKIIPAIATTTSAIVGLVCLELYKVVQGHQQLESYKNSFINLALPLF 318 Query: 543 SIAEPVPPKTIKHQELSWTVW 605 S + P+ P+ + + WT+W Sbjct: 319 SFSAPLAPECHQFYDQEWTLW 339
>UBE1X_MOUSE (P31253) Ubiquitin-activating enzyme E1 X (Fragment)| Length = 450 Score = 163 bits (412), Expect = 4e-40 Identities = 90/207 (43%), Positives = 122/207 (58%), Gaps = 6/207 (2%) Frame = +3 Query: 3 LSFILAAAILRAETFGIPIPEWAKTPNKLSAEAVDRVIVPDFQPKQGVKI-VTDEKATSL 179 L +++AAA L A+T+G+ A + V VP+F PK GVKI V+D++ S Sbjct: 148 LDYVMAAANLFAQTYGLT----GSQDRAAVASLLQSVQVPEFTPKSGVKIHVSDQELQSA 203 Query: 180 XXXXXXXXXXIEELIAKLEEISKTLPS-----GFHMNPIQFEKDDDTNFHMDVIAGFANM 344 ++LEE+ TLPS GF M PI FEKDDD+NFHMD I +N+ Sbjct: 204 NASVDD---------SRLEELKATLPSPDKLPGFKMYPIDFEKDDDSNFHMDFIVAASNL 254 Query: 345 RARNYSIPEVDKLKAKFIAGRIIPAIATSTAMATGLVCLELYKALAGGHKVEDYRNTFAN 524 RA NY I D+ K+K IAG+IIPAIAT+TA GLVCLELYK + G +++ Y+N F N Sbjct: 255 RAENYDISPADRHKSKLIAGKIIPAIATTTAAVVGLVCLELYKVVQGHQQLDSYKNGFLN 314 Query: 525 LAIPLFSIAEPVPPKTIKHQELSWTVW 605 LA+P F +EP+ ++ WT+W Sbjct: 315 LALPFFGFSEPLAAPRHQYYNQEWTLW 341
>UBE1_MOUSE (Q02053) Ubiquitin-activating enzyme E1 1| Length = 1058 Score = 163 bits (412), Expect = 4e-40 Identities = 90/207 (43%), Positives = 122/207 (58%), Gaps = 6/207 (2%) Frame = +3 Query: 3 LSFILAAAILRAETFGIPIPEWAKTPNKLSAEAVDRVIVPDFQPKQGVKI-VTDEKATSL 179 L +++AAA L A+T+G+ A + V VP+F PK GVKI V+D++ S Sbjct: 762 LDYVMAAANLFAQTYGLT----GSQDRAAVASLLQSVQVPEFTPKSGVKIHVSDQELQSA 817 Query: 180 XXXXXXXXXXIEELIAKLEEISKTLPS-----GFHMNPIQFEKDDDTNFHMDVIAGFANM 344 ++LEE+ TLPS GF M PI FEKDDD+NFHMD I +N+ Sbjct: 818 NASVDD---------SRLEELKATLPSPDKLPGFKMYPIDFEKDDDSNFHMDFIVAASNL 868 Query: 345 RARNYSIPEVDKLKAKFIAGRIIPAIATSTAMATGLVCLELYKALAGGHKVEDYRNTFAN 524 RA NY I D+ K+K IAG+IIPAIAT+TA GLVCLELYK + G +++ Y+N F N Sbjct: 869 RAENYDISPADRHKSKLIAGKIIPAIATTTAAVVGLVCLELYKVVQGHQQLDSYKNGFLN 928 Query: 525 LAIPLFSIAEPVPPKTIKHQELSWTVW 605 LA+P F +EP+ ++ WT+W Sbjct: 929 LALPFFGFSEPLAAPRHQYYNQEWTLW 955
>UBA1_YEAST (P22515) Ubiquitin-activating enzyme E1 1| Length = 1024 Score = 146 bits (368), Expect = 5e-35 Identities = 77/185 (41%), Positives = 111/185 (60%), Gaps = 1/185 (0%) Frame = +3 Query: 9 FILAAAILRAETFGIPIPEWAKTPNKLSAEAV-DRVIVPDFQPKQGVKIVTDEKATSLXX 185 F++A A LRA +GI + PN ++V D +I+P+F P +KI ++ Sbjct: 730 FVVAGASLRAYNYGIKSDDSNSKPNVDEYKSVIDHMIIPEFTPNANLKIQVNDDDPDPNA 789 Query: 186 XXXXXXXXIEELIAKLEEISKTLPSGFHMNPIQFEKDDDTNFHMDVIAGFANMRARNYSI 365 I++L++ L + S +GF + P+ FEKDDDTN H++ I +N RA+NY I Sbjct: 790 NAANGSDEIDQLVSSLPDPSTL--AGFKLEPVDFEKDDDTNHHIEFITACSNCRAQNYFI 847 Query: 366 PEVDKLKAKFIAGRIIPAIATSTAMATGLVCLELYKALAGGHKVEDYRNTFANLAIPLFS 545 D+ K KFIAGRIIPAIAT+T++ TGLV LELYK + +E Y+N F NLA+P F Sbjct: 848 ETADRQKTKFIAGRIIPAIATTTSLVTGLVNLELYKLIDNKTDIEQYKNGFVNLALPFFG 907 Query: 546 IAEPV 560 +EP+ Sbjct: 908 FSEPI 912
>UBA1_SCHPO (O94609) Ubiquitin-activating enzyme E1 1 (Poly(A)+ RNA transport| protein 3) Length = 1012 Score = 135 bits (341), Expect = 7e-32 Identities = 73/190 (38%), Positives = 109/190 (57%) Frame = +3 Query: 9 FILAAAILRAETFGIPIPEWAKTPNKLSAEAVDRVIVPDFQPKQGVKIVTDEKATSLXXX 188 FI+AAA L A +G+ ++T + + P F PK G+KI +E + Sbjct: 724 FIVAAASLYAFNYGLK----SETDPAIYERVLAGYNPPPFAPKSGIKIQVNENEEAPETA 779 Query: 189 XXXXXXXIEELIAKLEEISKTLPSGFHMNPIQFEKDDDTNFHMDVIAGFANMRARNYSIP 368 ++ + L S + GF + P +FEKDDD+N H+D I +N+RA NY I Sbjct: 780 ANKDKQELKSIADSLPPPSSLV--GFRLTPAEFEKDDDSNHHIDFITAASNLRAMNYDIT 837 Query: 369 EVDKLKAKFIAGRIIPAIATSTAMATGLVCLELYKALAGGHKVEDYRNTFANLAIPLFSI 548 D+ K KF+AG+I+PA+ TSTA+ +GLVCLEL K + G K+E+Y+N F NLAI LF+ Sbjct: 838 PADRFKTKFVAGKIVPAMCTSTAVVSGLVCLELVKLVDGKKKIEEYKNGFFNLAIGLFTF 897 Query: 549 AEPVPPKTIK 578 ++P+ +K Sbjct: 898 SDPIASPKMK 907
>UBA1_CANAL (P52495) Ubiquitin-activating enzyme E1 1 (Fragment)| Length = 205 Score = 112 bits (281), Expect = 6e-25 Identities = 53/93 (56%), Positives = 66/93 (70%) Frame = +3 Query: 282 QFEKDDDTNFHMDVIAGFANMRARNYSIPEVDKLKAKFIAGRIIPAIATSTAMATGLVCL 461 +FEKDDDTN H++ I +N RA NY I D K KFIAG+IIPAIAT+TA+ TGLVCL Sbjct: 1 EFEKDDDTNHHIEFITAASNCRALNYGIEIADAHKTKFIAGKIIPAIATTTALVTGLVCL 60 Query: 462 ELYKALAGGHKVEDYRNTFANLAIPLFSIAEPV 560 ELYK + G +E Y+N F NLA+P +EP+ Sbjct: 61 ELYKVVDGKDDIEQYKNGFINLALPFIGFSEPI 93
>UBE1L_HUMAN (P41226) Ubiquitin-activating enzyme E1 homolog (D8)| Length = 1011 Score = 104 bits (260), Expect = 2e-22 Identities = 69/205 (33%), Positives = 105/205 (51%), Gaps = 4/205 (1%) Frame = +3 Query: 3 LSFILAAAILRAETFGIP-IPEWAKTPNKLSAEAVDRVIVPDFQPKQGVKIVTDEKATSL 179 L ++LAAA L A+ G+P +W L ++P P+Q I A++L Sbjct: 724 LLYVLAAANLYAQMHGLPGSQDWTALRELLK-------LLPQPDPQQMAPIF----ASNL 772 Query: 180 XXXXXXXXXXIEELIAKLEEISKTLPS---GFHMNPIQFEKDDDTNFHMDVIAGFANMRA 350 E+ +E++K L G + P+ FEKDDD+NFH+D + A++R Sbjct: 773 ELASASAEFGPEQQ----KELNKALEVWSVGPPLKPLMFEKDDDSNFHVDFVVAAASLRC 828 Query: 351 RNYSIPEVDKLKAKFIAGRIIPAIATSTAMATGLVCLELYKALAGGHKVEDYRNTFANLA 530 +NY IP V++ ++K I G+IIPAIAT+TA GL+ LELYK ++G +R+++ +LA Sbjct: 829 QNYGIPPVNRAQSKRIVGQIIPAIATTTAAVAGLLGLELYKVVSGPRPRSAFRHSYLHLA 888 Query: 531 IPLFSIAEPVPPKTIKHQELSWTVW 605 P P L WT W Sbjct: 889 ENYLIRYMPFAPAIQTFHHLKWTSW 913
>ULE1B_MOUSE (Q9Z1F9) Ubiquitin-like 1-activating enzyme E1B (SUMO-1-activating| enzyme subunit 2) (Anthracycline-associated resistance ARX) Length = 638 Score = 53.5 bits (127), Expect = 5e-07 Identities = 46/158 (29%), Positives = 73/158 (46%), Gaps = 1/158 (0%) Frame = +3 Query: 54 PIP-EWAKTPNKLSAEAVDRVIVPDFQPKQGVKIVTDEKATSLXXXXXXXXXXIEELIAK 230 P+P +WA+ ++ A A + +P+ G+K D++ + IE L Sbjct: 279 PVPLDWAEVQSQGEANADQQN-----EPQLGLK---DQQVLDVKSYASLFSKSIETLRVH 330 Query: 231 LEEISKTLPSGFHMNPIQFEKDDDTNFHMDVIAGFANMRARNYSIPEVDKLKAKFIAGRI 410 L E + ++KDD MD + AN+R +S+ + K +AG I Sbjct: 331 LAEKGDGAE-------LIWDKDDPPA--MDFVTSAANLRMHIFSMNMKSRFDIKSMAGNI 381 Query: 411 IPAIATSTAMATGLVCLELYKALAGGHKVEDYRNTFAN 524 IPAIAT+ A+ GL+ LE K L+G K++ R F N Sbjct: 382 IPAIATTNAVIAGLIVLEGLKILSG--KIDQCRTIFLN 417
>ULE1B_HUMAN (Q9UBT2) Ubiquitin-like 1-activating enzyme E1B (SUMO-1-activating| enzyme subunit 2) (Anthracycline-associated resistance ARX) Length = 640 Score = 52.0 bits (123), Expect = 1e-06 Identities = 31/80 (38%), Positives = 46/80 (57%) Frame = +3 Query: 285 FEKDDDTNFHMDVIAGFANMRARNYSIPEVDKLKAKFIAGRIIPAIATSTAMATGLVCLE 464 ++KDD + MD + AN+R +S+ + K +AG IIPAIAT+ A+ GL+ LE Sbjct: 344 WDKDDPSA--MDFVTSAANLRMHIFSMNMKSRFDIKSMAGNIIPAIATTNAVIAGLIVLE 401 Query: 465 LYKALAGGHKVEDYRNTFAN 524 K L+G K++ R F N Sbjct: 402 GLKILSG--KIDQCRTIFLN 419
>UBA2_YEAST (P52488) Ubiquitin-activating enzyme E1-like| (Polymerase-interacting protein 2) Length = 636 Score = 48.1 bits (113), Expect = 2e-05 Identities = 32/83 (38%), Positives = 48/83 (57%), Gaps = 3/83 (3%) Frame = +3 Query: 210 IEELIAKLEEISKTLPSGF--HMNPIQFEKDD-DTNFHMDVIAGFANMRARNYSIPEVDK 380 I+E I+ I++ L + N I+F+KDD DT ++ +A AN+R+ ++IP Sbjct: 303 IQEQISNFINITQKLMDRYPKEQNHIEFDKDDADT---LEFVATAANIRSHIFNIPMKSV 359 Query: 381 LKAKFIAGRIIPAIATSTAMATG 449 K IAG IIPAIAT+ A+ G Sbjct: 360 FDIKQIAGNIIPAIATTNAIVAG 382
>UBA3_CAEEL (Q19360) NEDD8-activating enzyme E1 catalytic subunit (EC 6.3.2.-)| (Ubiquitin-activating enzyme 3 homolog) (Ectopic membrane ruffles in embryo protein 1) Length = 430 Score = 38.9 bits (89), Expect = 0.012 Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 1/74 (1%) Frame = +3 Query: 294 DDDTNFHMDVIAGFANMRARNYSIPEVDKLKAKFIAGRIIPAIATSTAMATGLVCLELYK 473 D D H++ + A++RA Y+I VD+ + RIIPA+A++ A+ LE K Sbjct: 244 DADDPIHVEWVLERASLRAEKYNIRGVDRRLTSGVLKRIIPAVASTNAVIAASCALEALK 303 Query: 474 ALAGGHK-VEDYRN 512 K +++Y N Sbjct: 304 LATNIAKPIDNYLN 317
>LPXK_SILPO (Q5LMW7) Tetraacyldisaccharide 4'-kinase (EC 2.7.1.130) (Lipid A| 4'-kinase) Length = 333 Score = 35.4 bits (80), Expect = 0.13 Identities = 32/83 (38%), Positives = 44/83 (53%), Gaps = 2/83 (2%) Frame = +3 Query: 330 GFANMR-ARNYSIPEVDKLKAKFIAGRIIPAIATSTAMATGLVCLELYKALAGGHKVEDY 506 GF N A++ SI VD + F GR IPA +ATGL +L AL E + Sbjct: 145 GFQNPSVAKDLSIVVVDAAQG-FGNGRCIPAGPLREPVATGLARADLVLALGDAQAQEQF 203 Query: 507 RNTF-ANLAIPLFSIAEPVPPKT 572 R+T+ A L++PL + AE P +T Sbjct: 204 RDTWGAALSVPLVT-AELKPLRT 225
>MUTS_BACSK (Q5WFY3) DNA mismatch repair protein mutS| Length = 871 Score = 32.3 bits (72), Expect = 1.1 Identities = 30/136 (22%), Positives = 56/136 (41%), Gaps = 2/136 (1%) Frame = +3 Query: 27 ILRAETFGIPIPEWAKTPNKLSAEAVDRVIVPDFQPKQGVKIVTDEKATSLXXXXXXXXX 206 + RA +P + + +AE R I P+ + K+ + + DEK L Sbjct: 466 VTRANAHLLPDGRYERKQTLTNAE---RYITPELKEKEALILEADEKLADLEYRLFADIR 522 Query: 207 X-IEELIAKLEEISKTLPSGFHMNPIQFEKDDDTNFHMDVIAGFANMRARN-YSIPEVDK 380 +E +A L++++ + MDV+AGFA++ +N Y+ P + + Sbjct: 523 KQVEAYVASLQKLAADISE------------------MDVLAGFASVAEQNGYTKPTITE 564 Query: 381 LKAKFIAGRIIPAIAT 428 + I G P + T Sbjct: 565 SRDVAIKGGRHPVVET 580
>MANA_STRLI (P51529) Mannan endo-1,4-beta-mannosidase precursor (EC 3.2.1.78)| (Beta-mannanase) (1,4-beta-D-mannan mannanohydrolase) Length = 383 Score = 32.3 bits (72), Expect = 1.1 Identities = 19/78 (24%), Positives = 32/78 (41%), Gaps = 4/78 (5%) Frame = -2 Query: 605 PDRPRQLLVLDGLGWNR----FSNGEQWDREVCKRVAVVFDLVSTSKGFVKLEAHEASGH 438 PDR + + G N S+G +W + V+ + +K LE H+ +G+ Sbjct: 68 PDRTGSIADIAAKGANTVRVVLSSGGRWTKTSASEVSALIGQCKANKVICVLEVHDTTGY 127 Query: 437 RSRGGDSWDDPAGYKLGL 384 G S D Y +G+ Sbjct: 128 GKDGATSLDQAGDYWVGV 145
>UBA3_ARATH (O65041) NEDD8-activating enzyme E1 catalytic subunit (EC 6.3.2.-)| (RUB-activating enzyme) (Ubiquitin activating enzyme E1-like protein) Length = 454 Score = 32.0 bits (71), Expect = 1.4 Identities = 21/67 (31%), Positives = 31/67 (46%) Frame = +3 Query: 294 DDDTNFHMDVIAGFANMRARNYSIPEVDKLKAKFIAGRIIPAIATSTAMATGLVCLELYK 473 D D HM + A RA + IP V + + IIPAIA++ A+ + LE K Sbjct: 246 DPDEPEHMKWVYDEAIRRAELFGIPGVTYSLTQGVVKNIIPAIASTNAIISAACALETLK 305 Query: 474 ALAGGHK 494 ++ K Sbjct: 306 IVSACSK 312
>ITB7_MOUSE (P26011) Integrin beta-7 precursor (Integrin beta-P) (M290 IEL| antigen) Length = 806 Score = 31.6 bits (70), Expect = 1.9 Identities = 13/29 (44%), Positives = 17/29 (58%) Frame = -1 Query: 360 CSSLPSCWQNQLSHPYGSWCHHPSQTVSG 274 C +PSC + LSHP +WC + T SG Sbjct: 45 CQPVPSCQKCILSHPSCAWCKQLNFTASG 73
>UBA3_SCHPO (Q09765) NEDD8-activating enzyme E1 catalytic subunit (EC 6.3.2.-)| (Ubiquitin-activating enzyme E1 3) Length = 444 Score = 31.6 bits (70), Expect = 1.9 Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 2/64 (3%) Frame = +3 Query: 294 DDDTNFHMDVIAGFANMRARNYSIPE--VDKLKAKFIAGRIIPAIATSTAMATGLVCLEL 467 + D H+D + + RA + IP +++ + I RIIPA+A++ A+ C E Sbjct: 255 EPDNIRHIDWLVKRSIERANKFQIPSSSINRFFVQGIVKRIIPAVASTNAIIAASCCNEA 314 Query: 468 YKAL 479 K L Sbjct: 315 LKIL 318
>ATRN_MOUSE (Q9WU60) Attractin precursor (Mahogany protein)| Length = 1428 Score = 31.2 bits (69), Expect = 2.4 Identities = 16/38 (42%), Positives = 19/38 (50%) Frame = -1 Query: 381 ACPLPECCSSLPSCWQNQLSHPYGSWCHHPSQTVSGSC 268 +CP PE CS +C + L P WC PS T G C Sbjct: 980 SCP-PENCSGYCTC-SHCLEQPGCGWCTDPSNTGKGKC 1015
>ATRN_RAT (Q99J86) Attractin precursor (Zitter protein)| Length = 1432 Score = 31.2 bits (69), Expect = 2.4 Identities = 16/38 (42%), Positives = 19/38 (50%) Frame = -1 Query: 381 ACPLPECCSSLPSCWQNQLSHPYGSWCHHPSQTVSGSC 268 +CP PE CS +C + L P WC PS T G C Sbjct: 984 SCP-PENCSGYCTC-SHCLEQPGCGWCTDPSNTGKGKC 1019
>ITB7_HUMAN (P26010) Integrin beta-7 precursor| Length = 798 Score = 30.8 bits (68), Expect = 3.2 Identities = 13/29 (44%), Positives = 16/29 (55%) Frame = -1 Query: 360 CSSLPSCWQNQLSHPYGSWCHHPSQTVSG 274 C PSC + LSHP +WC + T SG Sbjct: 45 CQPAPSCQKCILSHPSCAWCKQLNFTASG 73
>ATRN_HUMAN (O75882) Attractin precursor (Mahogany homolog) (DPPT-L)| Length = 1429 Score = 30.8 bits (68), Expect = 3.2 Identities = 16/37 (43%), Positives = 18/37 (48%) Frame = -1 Query: 378 CPLPECCSSLPSCWQNQLSHPYGSWCHHPSQTVSGSC 268 CP PE CS +C + L P WC PS T G C Sbjct: 982 CP-PENCSGYCTC-SHCLEQPGCGWCTDPSNTGKGKC 1016
>UBA3_PONPY (Q5R4A0) NEDD8-activating enzyme E1 catalytic subunit (EC 6.3.2.-)| (Ubiquitin-activating enzyme 3) (NEDD8-activating enzyme E1C) (Ubiquitin-activating enzyme E1C) Length = 463 Score = 30.4 bits (67), Expect = 4.2 Identities = 18/60 (30%), Positives = 30/60 (50%) Frame = +3 Query: 294 DDDTNFHMDVIAGFANMRARNYSIPEVDKLKAKFIAGRIIPAIATSTAMATGLVCLELYK 473 D D H+ I + RA Y+I V + + RIIPA+A++ A+ + E++K Sbjct: 271 DGDDPEHIQWIFQKSLERASQYNIRGVTYRLTQGVVKRIIPAVASTNAVVAAVCATEVFK 330
>UBA3_RAT (Q99MI7) NEDD8-activating enzyme E1 catalytic subunit (EC 6.3.2.-)| (Ubiquitin-activating enzyme 3) (NEDD8-activating enzyme E1C) (Ubiquitin-activating enzyme E1C) Length = 462 Score = 30.0 bits (66), Expect = 5.4 Identities = 18/60 (30%), Positives = 30/60 (50%) Frame = +3 Query: 294 DDDTNFHMDVIAGFANMRARNYSIPEVDKLKAKFIAGRIIPAIATSTAMATGLVCLELYK 473 D D H+ I + RA Y+I V + + RIIPA+A++ A+ + E++K Sbjct: 271 DGDDPEHIQWIFQKSVERASQYNIRGVTYRLTQGVVKRIIPAVASTNAVIAAVCATEVFK 330
>UBA3_MOUSE (Q8C878) NEDD8-activating enzyme E1 catalytic subunit (EC 6.3.2.-)| (Ubiquitin-activating enzyme 3) (NEDD8-activating enzyme E1C) (Ubiquitin-activating enzyme E1C) Length = 462 Score = 30.0 bits (66), Expect = 5.4 Identities = 18/60 (30%), Positives = 30/60 (50%) Frame = +3 Query: 294 DDDTNFHMDVIAGFANMRARNYSIPEVDKLKAKFIAGRIIPAIATSTAMATGLVCLELYK 473 D D H+ I + RA Y+I V + + RIIPA+A++ A+ + E++K Sbjct: 271 DGDDPEHIQWIFQKSIERASQYNIRGVTYRLTQGVVKRIIPAVASTNAVIAAVCATEVFK 330
>UBA3_HUMAN (Q8TBC4) NEDD8-activating enzyme E1 catalytic subunit (EC 6.3.2.-)| (Ubiquitin-activating enzyme 3) (NEDD8-activating enzyme E1C) (Ubiquitin-activating enzyme E1C) Length = 463 Score = 30.0 bits (66), Expect = 5.4 Identities = 18/60 (30%), Positives = 30/60 (50%) Frame = +3 Query: 294 DDDTNFHMDVIAGFANMRARNYSIPEVDKLKAKFIAGRIIPAIATSTAMATGLVCLELYK 473 D D H+ I + RA Y+I V + + RIIPA+A++ A+ + E++K Sbjct: 271 DGDDPEHIQWIFQKSLERASQYNIRGVTYRLTQGVVKRIIPAVASTNAVIAAVCATEVFK 330
>IL6RB_RAT (P40190) Interleukin-6 receptor beta chain precursor (IL-6R-beta)| (Interleukin 6 signal transducer) (Membrane glycoprotein 130) (gp130) (CD130 antigen) Length = 918 Score = 29.6 bits (65), Expect = 7.1 Identities = 14/46 (30%), Positives = 23/46 (50%) Frame = -2 Query: 143 PLLWLEIRDNHPVDSFSRQLVWGFGPLRYGYSKSLCPQYCSSQNKA 6 P W ++ NHP + S +L+W PL K L + +Q+K+ Sbjct: 329 PSFWYKVNANHPQEYRSARLIWKTLPLSEANGKILDYEVVLTQSKS 374
>PMD1_SCHPO (P36619) Leptomycin B resistance protein pmd1| Length = 1362 Score = 29.3 bits (64), Expect = 9.3 Identities = 13/21 (61%), Positives = 16/21 (76%) Frame = -3 Query: 160 SVTILTPCFGWKSGTITLSTA 98 SVTIL+ GWK G +TLST+ Sbjct: 928 SVTILSLATGWKLGLVTLSTS 948
>POLG_MVEV5 (P05769) Genome polyprotein [Contains: Capsid protein C (Core| protein); Envelope protein M (Matrix protein); Major envelope protein E; Nonstructural protein 1 (NS1); Nonstructural protein 2A (NS2A); Flavivirin protease NS2B regulatory subunit; Length = 3434 Score = 29.3 bits (64), Expect = 9.3 Identities = 13/30 (43%), Positives = 17/30 (56%), Gaps = 2/30 (6%) Frame = -1 Query: 339 WQNQLSHPYGSWCHHPSQTV--SGSCGTLM 256 W +HPY +W +H S V SGS TL+ Sbjct: 2823 WHTDDNHPYRTWTYHGSYEVKPSGSASTLV 2852
>KRA13_HUMAN (Q8IUG1) Keratin-associated protein 1-3 (Keratin-associated protein| 1.8) (Keratin-associated protein 1.9) Length = 177 Score = 29.3 bits (64), Expect = 9.3 Identities = 15/46 (32%), Positives = 22/46 (47%), Gaps = 6/46 (13%) Frame = -1 Query: 381 ACPLPECCSSL---PSCWQNQLSHP---YGSWCHHPSQTVSGSCGT 262 +C P CC + PSC + P S+C PS + SG+C + Sbjct: 23 SCCQPSCCETSCCQPSCCETSCCQPSCCQTSFCGFPSFSTSGTCSS 68 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 96,203,933 Number of Sequences: 219361 Number of extensions: 2058491 Number of successful extensions: 6877 Number of sequences better than 10.0: 34 Number of HSP's better than 10.0 without gapping: 6550 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6857 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5367617986 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
