ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal23j08
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK100223.1| Oryza sativa (japonica cultivar-group) cDNA clon... 549 e-153
2ref|NM_193577.1| Oryza sativa (japonica cultivar-group), predic... 478 e-131
3dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 182 8e-43
4dbj|AP003141.3| Oryza sativa (japonica cultivar-group) genomic D... 182 8e-43
5gb|BT013287.1| Lycopersicon esculentum clone 134897R, mRNA sequence 88 4e-14
6gb|DQ284465.1| Solanum tuberosum clone 096G02 3'-5' exonuclease ... 80 9e-12
7ref|NM_128151.2| Arabidopsis thaliana 3'-5' exonuclease/ nucleic... 56 1e-04
8ref|NM_001036341.1| Arabidopsis thaliana 3'-5' exonuclease/ nucl... 56 1e-04
9gb|AF361606.1| Arabidopsis thaliana At2g25910/F17H15.6 mRNA, com... 56 1e-04
10gb|AY074840.1| Arabidopsis thaliana At2g25910/F17H15.6 mRNA, com... 56 1e-04
11emb|BX820159.1|CNS0AA1G Arabidopsis thaliana Full-length cDNA Co... 56 1e-04
12gb|AY086659.1| Arabidopsis thaliana clone 26655 mRNA, complete s... 56 1e-04
13emb|BX820803.1|CNS0A9IS Arabidopsis thaliana Full-length cDNA Co... 48 0.031
14gb|AC005395.3| Arabidopsis thaliana chromosome 2 clone F17H15 ma... 46 0.12
15dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.48
16dbj|AP003763.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.48
17dbj|AK059857.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.48
18ref|XM_464382.1| Oryza sativa (japonica cultivar-group), mRNA 42 1.9
19dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.9
20gb|AC113618.5| Homo sapiens BAC clone RP11-1367O10 from 2, compl... 42 1.9
21dbj|AP004000.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.9
22dbj|AP003990.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.9
23dbj|AK065525.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.9
24gb|AC126448.3| Mus musculus BAC clone RP23-359M2 from chromosome... 40 7.5
25emb|CR848788.7| Zebrafish DNA sequence from clone DKEY-283B15 in... 40 7.5
26gb|AC128669.4| Mus musculus BAC clone RP24-115D21 from chromosom... 40 7.5
27ref|XM_724330.1| Plasmodium yoelii yoelii str. 17XNL hypothetica... 40 7.5
28emb|AL096868.15|HSJ493D19 Human DNA sequence from clone RP3-493D... 40 7.5
29gb|AC158777.3| Mus musculus chromosome 15, clone RP24-354I13, co... 40 7.5
30ref|XM_968361.1| PREDICTED: Tribolium castaneum similar to CG116... 40 7.5
31gb|AC051632.18| Oryza sativa chromosome 10 BAC OSJNBa0012L23 gen... 40 7.5
32gb|AC024594.9| Oryza sativa chromosome 10 BAC OSJNBa0093B11 geno... 40 7.5
33gb|AC079904.31| Homo sapiens 12 BAC RP11-84J24 (Roswell Park Can... 40 7.5
34dbj|BA000023.2| Sulfolobus tokodaii str. 7 DNA, complete genome 40 7.5
35dbj|AK148805.1| Mus musculus 2 days neonate sympathetic ganglion... 40 7.5
36gb|AC010867.8| Homo sapiens chromosome 15 clone RP11-390M11 map ... 40 7.5
37gb|DP000052.1| Sus scrofa target 126 genomic scaffold 40 7.5
38dbj|AK149094.1| Mus musculus 2 days neonate sympathetic ganglion... 40 7.5
39ref|NM_067199.1| Caenorhabditis elegans Y75B8A.28 (Y75B8A.28) mR... 40 7.5
40gb|AC016580.7|AC016580 Homo sapiens chromosome 5 clone CTD-2509J... 40 7.5
41gb|AC008935.8|AC008935 Homo sapiens chromosome 5 clone CTD-2308L... 40 7.5
42gb|AC084759.2|AC084759 Homo sapiens chromosome 15 clone RP11-643... 40 7.5
43dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.5
44dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.5
45gb|AC109185.15| Mus musculus chromosome 15, clone RP24-543J20, c... 40 7.5
46gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 40 7.5
47emb|AL033514.1|CEY75B8A Caenorhabditis elegans YAC Y75B8A, compl... 40 7.5
48gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 7.5
49emb|AL837528.5|CNS08CAR Oryza sativa chromosome 12, . BAC OSJNBb... 40 7.5
50gb|AC126939.5| Mus musculus BAC clone RP23-62M8 from 13, complet... 40 7.5
51emb|AL928722.4| Mouse DNA sequence from clone RP23-123E19 on chr... 40 7.5 
>dbj|AK100223.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023047H21, full
           insert sequence
          Length = 1245

 Score =  549 bits (277), Expect = e-153
 Identities = 406/449 (90%)
 Strand = Plus / Plus

                                                                       
Query: 106 gttgttactaaacctggtcaactaccggtcgagtttcttgagccctctgctgccaagaaa 165
           ||||||||||||||||||||||| || || ||||||||||| |||||||||||| |||||
Sbjct: 163 gttgttactaaacctggtcaactcccagttgagtttcttgaaccctctgctgcccagaaa 222

                                                                       
Query: 166 ttggtgattggatttgactgcgaaggtgttgacctttgccgcaatggtgctctctgtatc 225
            |||||||||||||||| || ||||| || |||||||||||| |||||||||||||||||
Sbjct: 223 ctggtgattggatttgattgtgaaggcgtagacctttgccgccatggtgctctctgtatc 282

                                                                       
Query: 226 atgcagattgcatttcctgatgctgtttacttggtcgatgctattgagggtggaaaagaa 285
           |||||||||||||||||||| ||||||||||| || ||||||||||||||||| ||||||
Sbjct: 283 atgcagattgcatttcctgacgctgtttacttagttgatgctattgagggtgggaaagaa 342

                                                                       
Query: 286 ctagttgaagcttgcaaaccagcacttgagtctgatcatgtcaccaaagttattcatgac 345
           ||  ||||||||||||||||||||||||| || ||  |||||||||||||||||||||||
Sbjct: 343 cttattgaagcttgcaaaccagcacttgaatcagaatatgtcaccaaagttattcatgac 402

                                                                       
Query: 346 tgtaaaagggacagtgaggcattgtatttccagtttggcattaaattacataatgtgatg 405
           || |||||||||||||||||  ||||||||||||||||||| ||||| ||||||||||||
Sbjct: 403 tgcaaaagggacagtgaggctctgtatttccagtttggcataaaattgcataatgtgatg 462

                                                                       
Query: 406 gatacacagatagcctattccctgatagaagagcaggaaggtaaaaagagagcatatgat 465
           ||||||||||| || ||||| ||| |||| ||||||||||| |||||||||| ||| |||
Sbjct: 463 gatacacagatcgcttattctctgttagaggagcaggaagggaaaaagagaggatacgat 522

                                                                       
Query: 466 gtttacatatccttcgtgagccttcttgctgatcctcgctattgtggaatgccatatcct 525
           |  |||||||| || || ||||| ||||||||||| || |||||||||||| ||||||||
Sbjct: 523 gagtacatatcttttgtcagcctccttgctgatccccgatattgtggaatggcatatcct 582

                                        
Query: 526 gaaaaggaagaagtccgtacccttctaag 554
           |||||||||||||||||||||||||||||
Sbjct: 583 gaaaaggaagaagtccgtacccttctaag 611
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>ref|NM_193577.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1209

 Score =  478 bits (241), Expect = e-131
 Identities = 355/393 (90%)
 Strand = Plus / Plus

                                                                       
Query: 162 gaaattggtgattggatttgactgcgaaggtgttgacctttgccgcaatggtgctctctg 221
           |||| |||||||||||||||| || ||||| || |||||||||||| |||||||||||||
Sbjct: 348 gaaactggtgattggatttgattgtgaaggcgtagacctttgccgccatggtgctctctg 407

                                                                       
Query: 222 tatcatgcagattgcatttcctgatgctgtttacttggtcgatgctattgagggtggaaa 281
           |||||||||||||||||||||||| ||||||||||| || ||||||||||||||||| ||
Sbjct: 408 tatcatgcagattgcatttcctgacgctgtttacttagttgatgctattgagggtgggaa 467

                                                                       
Query: 282 agaactagttgaagcttgcaaaccagcacttgagtctgatcatgtcaccaaagttattca 341
           ||||||  ||||||||||||||||||||||||| || ||  |||||||||||||||||||
Sbjct: 468 agaacttattgaagcttgcaaaccagcacttgaatcagaatatgtcaccaaagttattca 527

                                                                       
Query: 342 tgactgtaaaagggacagtgaggcattgtatttccagtttggcattaaattacataatgt 401
           |||||| |||||||||||||||||  ||||||||||||||||||| ||||| ||||||||
Sbjct: 528 tgactgcaaaagggacagtgaggctctgtatttccagtttggcataaaattgcataatgt 587

                                                                       
Query: 402 gatggatacacagatagcctattccctgatagaagagcaggaaggtaaaaagagagcata 461
           ||||||||||||||| || ||||| ||| |||| ||||||||||| |||||||||| |||
Sbjct: 588 gatggatacacagatcgcttattctctgttagaggagcaggaagggaaaaagagaggata 647

                                                                       
Query: 462 tgatgtttacatatccttcgtgagccttcttgctgatcctcgctattgtggaatgccata 521
            ||||  |||||||| || || ||||| ||||||||||| || |||||||||||| ||||
Sbjct: 648 cgatgagtacatatcttttgtcagcctccttgctgatccccgatattgtggaatggcata 707

                                            
Query: 522 tcctgaaaaggaagaagtccgtacccttctaag 554
           |||||||||||||||||||||||||||||||||
Sbjct: 708 tcctgaaaaggaagaagtccgtacccttctaag 740
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  182 bits (92), Expect = 8e-43
 Identities = 125/136 (91%)
 Strand = Plus / Minus

                                                                            
Query: 229      cagattgcatttcctgatgctgtttacttggtcgatgctattgagggtggaaaagaacta 288
                ||||||||||||||||| ||||||||||| || ||||||||||||||||| |||||||| 
Sbjct: 21698922 cagattgcatttcctgacgctgtttacttagttgatgctattgagggtgggaaagaactt 21698863

                                                                            
Query: 289      gttgaagcttgcaaaccagcacttgagtctgatcatgtcaccaaagttattcatgactgt 348
                 ||||||||||||||||||||||||| || ||  ||||||||||||||||||||||||| 
Sbjct: 21698862 attgaagcttgcaaaccagcacttgaatcagaatatgtcaccaaagttattcatgactgc 21698803

                                
Query: 349      aaaagggacagtgagg 364
                ||||||||||||||||
Sbjct: 21698802 aaaagggacagtgagg 21698787



 Score =  163 bits (82), Expect = 8e-37
 Identities = 115/126 (91%)
 Strand = Plus / Minus

                                                                            
Query: 106      gttgttactaaacctggtcaactaccggtcgagtttcttgagccctctgctgccaagaaa 165
                ||||||||||||||||||||||| || || ||||||||||| |||||||||||| |||||
Sbjct: 21699470 gttgttactaaacctggtcaactcccagttgagtttcttgaaccctctgctgcccagaaa 21699411

                                                                            
Query: 166      ttggtgattggatttgactgcgaaggtgttgacctttgccgcaatggtgctctctgtatc 225
                 |||||||||||||||| || ||||| || |||||||||||| |||||||||||||||||
Sbjct: 21699410 ctggtgattggatttgattgtgaaggcgtagacctttgccgccatggtgctctctgtatc 21699351

                      
Query: 226      atgcag 231
                ||||||
Sbjct: 21699350 atgcag 21699345



 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 43/44 (97%)
 Strand = Plus / Minus

                                                            
Query: 511      ggaatgccatatcctgaaaaggaagaagtccgtacccttctaag 554
                |||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 21697249 ggaatggcatatcctgaaaaggaagaagtccgtacccttctaag 21697206



 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 45/47 (95%)
 Strand = Plus / Minus

                                                               
Query: 368      tgtatttccagtttggcattaaattacataatgtgatggatacacag 414
                ||||||||||||||||||| ||||| |||||||||||||||||||||
Sbjct: 21698683 tgtatttccagtttggcataaaattgcataatgtgatggatacacag 21698637



 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 85/101 (84%)
 Strand = Plus / Minus

                                                                            
Query: 412      cagatagcctattccctgatagaagagcaggaaggtaaaaagagagcatatgatgtttac 471
                ||||| || ||||| ||| |||| ||||||||||| |||||||||| ||| ||||  |||
Sbjct: 21698231 cagatcgcttattctctgttagaggagcaggaagggaaaaagagaggatacgatgagtac 21698172

                                                         
Query: 472      atatccttcgtgagccttcttgctgatcctcgctattgtgg 512
                ||||| || || ||||| ||||||||||| || ||||||||
Sbjct: 21698171 atatcttttgtcagcctccttgctgatccccgatattgtgg 21698131
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>dbj|AP003141.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0002B05
          Length = 141275

 Score =  182 bits (92), Expect = 8e-43
 Identities = 125/136 (91%)
 Strand = Plus / Minus

                                                                         
Query: 229   cagattgcatttcctgatgctgtttacttggtcgatgctattgagggtggaaaagaacta 288
             ||||||||||||||||| ||||||||||| || ||||||||||||||||| |||||||| 
Sbjct: 50973 cagattgcatttcctgacgctgtttacttagttgatgctattgagggtgggaaagaactt 50914

                                                                         
Query: 289   gttgaagcttgcaaaccagcacttgagtctgatcatgtcaccaaagttattcatgactgt 348
              ||||||||||||||||||||||||| || ||  ||||||||||||||||||||||||| 
Sbjct: 50913 attgaagcttgcaaaccagcacttgaatcagaatatgtcaccaaagttattcatgactgc 50854

                             
Query: 349   aaaagggacagtgagg 364
             ||||||||||||||||
Sbjct: 50853 aaaagggacagtgagg 50838



 Score =  163 bits (82), Expect = 8e-37
 Identities = 115/126 (91%)
 Strand = Plus / Minus

                                                                         
Query: 106   gttgttactaaacctggtcaactaccggtcgagtttcttgagccctctgctgccaagaaa 165
             ||||||||||||||||||||||| || || ||||||||||| |||||||||||| |||||
Sbjct: 51521 gttgttactaaacctggtcaactcccagttgagtttcttgaaccctctgctgcccagaaa 51462

                                                                         
Query: 166   ttggtgattggatttgactgcgaaggtgttgacctttgccgcaatggtgctctctgtatc 225
              |||||||||||||||| || ||||| || |||||||||||| |||||||||||||||||
Sbjct: 51461 ctggtgattggatttgattgtgaaggcgtagacctttgccgccatggtgctctctgtatc 51402

                   
Query: 226   atgcag 231
             ||||||
Sbjct: 51401 atgcag 51396



 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 43/44 (97%)
 Strand = Plus / Minus

                                                         
Query: 511   ggaatgccatatcctgaaaaggaagaagtccgtacccttctaag 554
             |||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 49300 ggaatggcatatcctgaaaaggaagaagtccgtacccttctaag 49257



 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 45/47 (95%)
 Strand = Plus / Minus

                                                            
Query: 368   tgtatttccagtttggcattaaattacataatgtgatggatacacag 414
             ||||||||||||||||||| ||||| |||||||||||||||||||||
Sbjct: 50734 tgtatttccagtttggcataaaattgcataatgtgatggatacacag 50688



 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 85/101 (84%)
 Strand = Plus / Minus

                                                                         
Query: 412   cagatagcctattccctgatagaagagcaggaaggtaaaaagagagcatatgatgtttac 471
             ||||| || ||||| ||| |||| ||||||||||| |||||||||| ||| ||||  |||
Sbjct: 50282 cagatcgcttattctctgttagaggagcaggaagggaaaaagagaggatacgatgagtac 50223

                                                      
Query: 472   atatccttcgtgagccttcttgctgatcctcgctattgtgg 512
             ||||| || || ||||| ||||||||||| || ||||||||
Sbjct: 50222 atatcttttgtcagcctccttgctgatccccgatattgtgg 50182
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>gb|BT013287.1| Lycopersicon esculentum clone 134897R, mRNA sequence
          Length = 1244

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 86/100 (86%)
 Strand = Plus / Plus

                                                                       
Query: 326 tcaccaaagttattcatgactgtaaaagggacagtgaggcattgtatttccagtttggca 385
           |||| |||||||||||||| || ||||| || ||||||||||||||||| ||||||||||
Sbjct: 347 tcacaaaagttattcatgattgcaaaagagatagtgaggcattgtattttcagtttggca 406

                                                   
Query: 386 ttaaattacataatgtgatggatacacagatagcctattc 425
           | || || || |||||  ||||||||||||| || |||||
Sbjct: 407 taaagttgcacaatgttgtggatacacagattgcatattc 446
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>gb|DQ284465.1| Solanum tuberosum clone 096G02 3'-5' exonuclease domain-containing
           protein-like mRNA, complete cds
          Length = 1249

 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 85/100 (85%)
 Strand = Plus / Plus

                                                                       
Query: 326 tcaccaaagttattcatgactgtaaaagggacagtgaggcattgtatttccagtttggca 385
           |||| |||||||||||||| || ||| | || ||||||||||||||||| ||||||||||
Sbjct: 325 tcacaaaagttattcatgattgcaaacgagatagtgaggcattgtattttcagtttggca 384

                                                   
Query: 386 ttaaattacataatgtgatggatacacagatagcctattc 425
           | || || || |||||  ||||||||||||| || |||||
Sbjct: 385 taaagttgcacaatgttgtggatacacagattgcatattc 424
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>ref|NM_128151.2| Arabidopsis thaliana 3'-5' exonuclease/ nucleic acid binding
           AT2G25910 transcript variant AT2G25910.1 mRNA, complete
           cds
          Length = 1410

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 67/80 (83%)
 Strand = Plus / Plus

                                                                       
Query: 160 aagaaattggtgattggatttgactgcgaaggtgttgacctttgccgcaatggtgctctc 219
           ||||||||||| || || |||||||| || ||||||||||| |||||  ||||    || 
Sbjct: 229 aagaaattggttatcggttttgactgtgagggtgttgacctctgccgacatgggaaactt 288

                               
Query: 220 tgtatcatgcagattgcatt 239
           ||||||||||||||||||||
Sbjct: 289 tgtatcatgcagattgcatt 308
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>ref|NM_001036341.1| Arabidopsis thaliana 3'-5' exonuclease/ nucleic acid binding
           AT2G25910 transcript variant AT2G25910.2 mRNA, complete
           cds
          Length = 1422

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 67/80 (83%)
 Strand = Plus / Plus

                                                                       
Query: 160 aagaaattggtgattggatttgactgcgaaggtgttgacctttgccgcaatggtgctctc 219
           ||||||||||| || || |||||||| || ||||||||||| |||||  ||||    || 
Sbjct: 229 aagaaattggttatcggttttgactgtgagggtgttgacctctgccgacatgggaaactt 288

                               
Query: 220 tgtatcatgcagattgcatt 239
           ||||||||||||||||||||
Sbjct: 289 tgtatcatgcagattgcatt 308
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>gb|AF361606.1| Arabidopsis thaliana At2g25910/F17H15.6 mRNA, complete cds
          Length = 1334

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 67/80 (83%)
 Strand = Plus / Plus

                                                                       
Query: 160 aagaaattggtgattggatttgactgcgaaggtgttgacctttgccgcaatggtgctctc 219
           ||||||||||| || || |||||||| || ||||||||||| |||||  ||||    || 
Sbjct: 229 aagaaattggttatcggttttgactgtgagggtgttgacctctgccgacatgggaaactt 288

                               
Query: 220 tgtatcatgcagattgcatt 239
           ||||||||||||||||||||
Sbjct: 289 tgtatcatgcagattgcatt 308
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>gb|AY074840.1| Arabidopsis thaliana At2g25910/F17H15.6 mRNA, complete cds
          Length = 1026

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 67/80 (83%)
 Strand = Plus / Plus

                                                                       
Query: 160 aagaaattggtgattggatttgactgcgaaggtgttgacctttgccgcaatggtgctctc 219
           ||||||||||| || || |||||||| || ||||||||||| |||||  ||||    || 
Sbjct: 160 aagaaattggttatcggttttgactgtgagggtgttgacctctgccgacatgggaaactt 219

                               
Query: 220 tgtatcatgcagattgcatt 239
           ||||||||||||||||||||
Sbjct: 220 tgtatcatgcagattgcatt 239
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>emb|BX820159.1|CNS0AA1G Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS83ZA06 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1302

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 67/80 (83%)
 Strand = Plus / Plus

                                                                       
Query: 160 aagaaattggtgattggatttgactgcgaaggtgttgacctttgccgcaatggtgctctc 219
           ||||||||||| || || |||||||| || ||||||||||| |||||  ||||    || 
Sbjct: 198 aagaaattggttatcggttttgactgtgagggtgttgacctctgccgacatgggaaactt 257

                               
Query: 220 tgtatcatgcagattgcatt 239
           ||||||||||||||||||||
Sbjct: 258 tgtatcatgcagattgcatt 277
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>gb|AY086659.1| Arabidopsis thaliana clone 26655 mRNA, complete sequence
          Length = 1353

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 67/80 (83%)
 Strand = Plus / Plus

                                                                       
Query: 160 aagaaattggtgattggatttgactgcgaaggtgttgacctttgccgcaatggtgctctc 219
           ||||||||||| || || |||||||| || ||||||||||| |||||  ||||    || 
Sbjct: 173 aagaaattggttatcggttttgactgtgagggtgttgacctctgccgacatgggaaactt 232

                               
Query: 220 tgtatcatgcagattgcatt 239
           ||||||||||||||||||||
Sbjct: 233 tgtatcatgcagattgcatt 252
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>emb|BX820803.1|CNS0A9IS Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH70ZC05 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1375

 Score = 48.1 bits (24), Expect = 0.031
 Identities = 66/80 (82%)
 Strand = Plus / Plus

                                                                       
Query: 160 aagaaattggtgattggatttgactgcgaaggtgttgacctttgccgcaatggtgctctc 219
           ||||||||||| || || ||||||||  | ||||||||||| |||||  ||||    || 
Sbjct: 214 aagaaattggttatcggttttgactgttagggtgttgacctctgccgacatgggaaactt 273

                               
Query: 220 tgtatcatgcagattgcatt 239
           ||||||||||||||||||||
Sbjct: 274 tgtatcatgcagattgcatt 293
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>gb|AC005395.3| Arabidopsis thaliana chromosome 2 clone F17H15 map B68, complete
             sequence
          Length = 102004

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                            
Query: 160   aagaaattggtgattggatttgactgcgaaggtgttgacctttgccg 206
             ||||||||||| || || |||||||| || ||||||||||| |||||
Sbjct: 24662 aagaaattggttatcggttttgactgtgagggtgttgacctctgccg 24708
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 514      atgccatatcctgaaaaggaag 535
                ||||||||||||||||||||||
Sbjct: 13045028 atgccatatcctgaaaaggaag 13045049
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>dbj|AP003763.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0531C01
          Length = 158574

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 514   atgccatatcctgaaaaggaag 535
             ||||||||||||||||||||||
Sbjct: 83829 atgccatatcctgaaaaggaag 83850
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>dbj|AK059857.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-207-B02, full
           insert sequence
          Length = 1138

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 514 atgccatatcctgaaaaggaag 535
           ||||||||||||||||||||||
Sbjct: 51  atgccatatcctgaaaaggaag 30
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>ref|XM_464382.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1759

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                       
Query: 29 cctcccatccccccaactccgccgatggc 57
          |||||| |||||||||||||| |||||||
Sbjct: 46 cctcccctccccccaactccggcgatggc 74
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                            
Query: 29      cctcccatccccccaactccgccgatggc 57
               |||||| |||||||||||||| |||||||
Sbjct: 4841843 cctcccctccccccaactccggcgatggc 4841815
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>gb|AC113618.5| Homo sapiens BAC clone RP11-1367O10 from 2, complete sequence
          Length = 199917

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 309    acttgagtctgatcatgtcac 329
              |||||||||||||||||||||
Sbjct: 187510 acttgagtctgatcatgtcac 187490
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>dbj|AP004000.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1115_B01
          Length = 129329

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 29     cctcccatccccccaactccgccgatggc 57
              |||||| |||||||||||||| |||||||
Sbjct: 122433 cctcccctccccccaactccggcgatggc 122405
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>dbj|AP003990.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1073_F05
          Length = 124252

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 29    cctcccatccccccaactccgccgatggc 57
             |||||| |||||||||||||| |||||||
Sbjct: 84002 cctcccctccccccaactccggcgatggc 83974
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>dbj|AK065525.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013030F22,
          full insert sequence
          Length = 1759

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                       
Query: 29 cctcccatccccccaactccgccgatggc 57
          |||||| |||||||||||||| |||||||
Sbjct: 46 cctcccctccccccaactccggcgatggc 74
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>gb|AC126448.3| Mus musculus BAC clone RP23-359M2 from chromosome 17, complete
            sequence
          Length = 207537

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 437  agcaggaaggtaaaaagaga 456
            ||||||||||||||||||||
Sbjct: 4009 agcaggaaggtaaaaagaga 3990
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>emb|CR848788.7| Zebrafish DNA sequence from clone DKEY-283B15 in linkage group 16,
              complete sequence
          Length = 189441

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 233    ttgcatttcctgatgctgtt 252
              ||||||||||||||||||||
Sbjct: 164485 ttgcatttcctgatgctgtt 164504
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>gb|AC128669.4| Mus musculus BAC clone RP24-115D21 from chromosome 17, complete sequence
          Length = 169571

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 437    agcaggaaggtaaaaagaga 456
              ||||||||||||||||||||
Sbjct: 146793 agcaggaaggtaaaaagaga 146774
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>ref|XM_724330.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY00166)
           partial mRNA
          Length = 369

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 445 ggtaaaaagagagcatatga 464
           ||||||||||||||||||||
Sbjct: 51  ggtaaaaagagagcatatga 70
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>emb|AL096868.15|HSJ493D19 Human DNA sequence from clone RP3-493D19 on chromosome 6q14.3-16.1
              Contains part of the RNGTT gene for RNA guanylyltransferase
              and 5'-phosphatase (mRNA capping enzyme, CAP1A), complete
              sequence
          Length = 151761

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 407    atacacagatagcctattccctga 430
              ||||||||||| ||||||||||||
Sbjct: 119612 atacacagataacctattccctga 119635
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>gb|AC158777.3| Mus musculus chromosome 15, clone RP24-354I13, complete sequence
          Length = 175668

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 234   tgcatttcctgatgctgttt 253
             ||||||||||||||||||||
Sbjct: 68727 tgcatttcctgatgctgttt 68746
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>ref|XM_968361.1| PREDICTED: Tribolium castaneum similar to CG11680-PA, isoform A
            (LOC662250), mRNA
          Length = 3663

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 321  tcatgtcaccaaagttattc 340
            ||||||||||||||||||||
Sbjct: 2088 tcatgtcaccaaagttattc 2107
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>gb|AC051632.18| Oryza sativa chromosome 10 BAC OSJNBa0012L23 genomic sequence,
           complete sequence
          Length = 153182

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 278 gaaaagaactagttgaagct 297
           ||||||||||||||||||||
Sbjct: 415 gaaaagaactagttgaagct 396
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>gb|AC024594.9| Oryza sativa chromosome 10 BAC OSJNBa0093B11 genomic sequence, complete
             sequence
          Length = 178692

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 278   gaaaagaactagttgaagct 297
             ||||||||||||||||||||
Sbjct: 29123 gaaaagaactagttgaagct 29142
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>gb|AC079904.31| Homo sapiens 12 BAC RP11-84J24 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 197964

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 27/28 (96%), Gaps = 1/28 (3%)
 Strand = Plus / Minus

                                         
Query: 147   gccctctgct-gccaagaaattggtgat 173
             |||||||||| |||||||||||||||||
Sbjct: 18196 gccctctgctagccaagaaattggtgat 18169
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>dbj|BA000023.2| Sulfolobus tokodaii str. 7 DNA, complete genome
          Length = 2694756

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 428    tgatagaagagcaggaaggtaaaaagag 455
              ||||||||||||||||||| ||| ||||
Sbjct: 394532 tgatagaagagcaggaaggaaaatagag 394559
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>dbj|AK148805.1| Mus musculus 2 days neonate sympathetic ganglion cDNA, RIKEN
           full-length enriched library, clone:7120448K24
           product:hypothetical Glutamic acid-rich region
           profile/Serine-rich region profile containing protein,
           full insert sequence
          Length = 1443

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 148 ccctctgctgccaagaaatt 167
           ||||||||||||||||||||
Sbjct: 730 ccctctgctgccaagaaatt 711
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>gb|AC010867.8| Homo sapiens chromosome 15 clone RP11-390M11 map 15q21.3, complete
            sequence
          Length = 221631

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 27/28 (96%), Gaps = 1/28 (3%)
 Strand = Plus / Plus

                                        
Query: 147  gccctctgct-gccaagaaattggtgat 173
            |||||||||| |||||||||||||||||
Sbjct: 3482 gccctctgctagccaagaaattggtgat 3509
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>gb|DP000052.1| Sus scrofa target 126 genomic scaffold
          Length = 432382

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 386    ttaaattacataatgtgatg 405
              ||||||||||||||||||||
Sbjct: 317332 ttaaattacataatgtgatg 317351
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>dbj|AK149094.1| Mus musculus 2 days neonate sympathetic ganglion cDNA, RIKEN
            full-length enriched library, clone:7120482O14
            product:Ubiquitin-specific proteinase 34 homolog [Homo
            sapiens], full insert sequence
          Length = 1577

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 148  ccctctgctgccaagaaatt 167
            ||||||||||||||||||||
Sbjct: 1286 ccctctgctgccaagaaatt 1267
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>ref|NM_067199.1| Caenorhabditis elegans Y75B8A.28 (Y75B8A.28) mRNA, complete cds
          Length = 1092

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 507 ttgtggaatgccatatcctgaaaa 530
           |||||||||| |||||||||||||
Sbjct: 435 ttgtggaatggcatatcctgaaaa 412
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>gb|AC016580.7|AC016580 Homo sapiens chromosome 5 clone CTD-2509J24, complete sequence
          Length = 184118

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 95     tgccctttcatgttgttact 114
              ||||||||||||||||||||
Sbjct: 127525 tgccctttcatgttgttact 127506
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>gb|AC008935.8|AC008935 Homo sapiens chromosome 5 clone CTD-2308L13, complete sequence
          Length = 102477

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 95    tgccctttcatgttgttact 114
             ||||||||||||||||||||
Sbjct: 63945 tgccctttcatgttgttact 63964
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>gb|AC084759.2|AC084759 Homo sapiens chromosome 15 clone RP11-643A5 map 15q21.3, complete
              sequence
          Length = 173921

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 27/28 (96%), Gaps = 1/28 (3%)
 Strand = Plus / Plus

                                          
Query: 147    gccctctgct-gccaagaaattggtgat 173
              |||||||||| |||||||||||||||||
Sbjct: 166302 gccctctgctagccaagaaattggtgat 166329
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 279      aaaagaactagttgaagctt 298
                ||||||||||||||||||||
Sbjct: 25352866 aaaagaactagttgaagctt 25352847
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 278      gaaaagaactagttgaagct 297
                ||||||||||||||||||||
Sbjct: 17645508 gaaaagaactagttgaagct 17645489
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>gb|AC109185.15| Mus musculus chromosome 15, clone RP24-543J20, complete sequence
          Length = 179776

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 234   tgcatttcctgatgctgttt 253
             ||||||||||||||||||||
Sbjct: 87517 tgcatttcctgatgctgttt 87536
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 278      gaaaagaactagttgaagct 297
                ||||||||||||||||||||
Sbjct: 17654548 gaaaagaactagttgaagct 17654529
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>emb|AL033514.1|CEY75B8A Caenorhabditis elegans YAC Y75B8A, complete sequence
          Length = 298406

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 507    ttgtggaatgccatatcctgaaaa 530
              |||||||||| |||||||||||||
Sbjct: 251813 ttgtggaatggcatatcctgaaaa 251790
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 279      aaaagaactagttgaagctt 298
                ||||||||||||||||||||
Sbjct: 25281042 aaaagaactagttgaagctt 25281023
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>emb|AL837528.5|CNS08CAR Oryza sativa chromosome 12, . BAC OSJNBb0062H20 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 152914

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 279   aaaagaactagttgaagctt 298
             ||||||||||||||||||||
Sbjct: 19676 aaaagaactagttgaagctt 19657
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>gb|AC126939.5| Mus musculus BAC clone RP23-62M8 from 13, complete sequence
          Length = 236514

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 95     tgccctttcatgttgttact 114
              ||||||||||||||||||||
Sbjct: 146415 tgccctttcatgttgttact 146434
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>emb|AL928722.4| Mouse DNA sequence from clone RP23-123E19 on chromosome 11, complete
             sequence
          Length = 41736

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 148   ccctctgctgccaagaaatt 167
             ||||||||||||||||||||
Sbjct: 38548 ccctctgctgccaagaaatt 38529


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,816,978
Number of Sequences: 3902068
Number of extensions: 4816978
Number of successful extensions: 91825
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 91572
Number of HSP's gapped (non-prelim): 249
length of query: 554
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 531
effective length of database: 17,143,297,704
effective search space: 9103091080824
effective search space used: 9103091080824
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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