ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal23j06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|AJ234431.1|HVU234431 Hordeum vulgare partial mRNA; clone cMW... 1061 0.0
2emb|AJ606022.1| Triticum aestivum partial mRNA for putative micr... 505 e-140
3ref|NM_189035.2| Oryza sativa (japonica cultivar-group), mRNA 186 6e-44
4dbj|AK066731.1| Oryza sativa (japonica cultivar-group) cDNA clon... 186 6e-44
5dbj|AK066492.1| Oryza sativa (japonica cultivar-group) cDNA clon... 186 6e-44
6dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 119 1e-23
7dbj|AP004708.3| Oryza sativa (japonica cultivar-group) genomic D... 119 1e-23
8ref|NG_005550.2| Homo sapiens neuroblastoma breakpoint family, m... 42 2.2
9emb|AL732363.8| Human DNA sequence from clone RP11-744H18 on chr... 42 2.2
10gb|AC129338.2| Homo sapiens BAC clone RP11-51A19 from UL, comple... 42 2.2
11gb|AC127701.2| Homo sapiens BAC clone RP11-79F18 from UL, comple... 42 2.2
12gb|AC163282.3| Mus musculus BAC clone RP23-454I20 from chromosom... 42 2.2
13gb|AC159912.9| Mus musculus 6 BAC RP24-314B1 (Roswell Park Cance... 42 2.2
14gb|AC157101.9| Mus musculus 6 BAC RP24-549J13 (Roswell Park Canc... 42 2.2
15gb|AC011293.5|AC011293 Homo sapiens BAC clone RP11-75F5 from Y, ... 42 2.2
16gb|AC019340.6| Homo sapiens BAC clone RP11-715L17 from 7, comple... 42 2.2
17gb|AC154578.2| Mus musculus BAC clone RP23-375N17 from 16, compl... 42 2.2
18emb|CT030161.10| Mouse DNA sequence from clone RP23-235H10 on ch... 42 2.2
19emb|CT010569.11| Mouse DNA sequence from clone RP23-237G24 on ch... 42 2.2
20gb|AC134594.5| Mus musculus BAC clone RP23-388B6 from 12, comple... 42 2.2
21gb|AC150278.1| Pan troglodytes BAC clone CH251-126G17 from Y, co... 40 8.7
22gb|BC070857.1| Xenopus laevis hypothetical protein MGC84608, mRN... 40 8.7
23gb|AC159631.2| Mus musculus BAC clone RP24-177F21 from chromosom... 40 8.7
24gb|AC134879.3| Homo sapiens BAC clone RP11-295P22 from Y, comple... 40 8.7
25gb|AC101490.8| Mus musculus chromosome 3, clone RP23-188O2, comp... 40 8.7
26gb|AE016795.2| Vibrio vulnificus CMCP6 chromosome I complete seq... 40 8.7
27emb|AL133216.10| Human DNA sequence from clone RP11-291L22 on ch... 40 8.7
28emb|BX294134.1| Pirellula sp. strain 1 complete genome; segment ... 40 8.7
29dbj|BS000654.1| Pan troglodytes chromosome Y clone:PTB-129E12, c... 40 8.7
30gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence 40 8.7
31dbj|AP007152.1| Aspergillus oryzae RIB40 genomic DNA, SC308 40 8.7
32gb|AC026405.5| Homo sapiens chromosome 5 clone CTC-347N9, comple... 40 8.7
33dbj|AK036360.1| Mus musculus 16 days neonate cerebellum cDNA, RI... 40 8.7
34gb|AC158382.2| Mus musculus BAC clone RP24-105N17 from chromosom... 40 8.7
35gb|AC172374.4| Pan troglodytes BAC clone CH251-119H6 from chromo... 40 8.7
36gb|AC018696.4| Homo sapiens BAC clone RP11-575H3 from 2, complet... 40 8.7
37gb|AC150909.3| Pan troglodytes BAC clone CH251-1056O7 from chrom... 40 8.7
38gb|AC156805.2| Pan troglodytes BAC clone CH251-830G14 from chrom... 40 8.7
39gb|AC137499.2| Homo sapiens chromosome 16 clone RP11-317D10, com... 40 8.7
40gb|AC130474.12| Mus musculus chromosome 7, clone RP23-178C20, co... 40 8.7
41emb|AJ609644.1| Wolbachia pipientis partial gltA gene for citrat... 40 8.7 
>emb|AJ234431.1|HVU234431 Hordeum vulgare partial mRNA; clone cMWG0705
          Length = 634

 Score = 1061 bits (535), Expect = 0.0
 Identities = 570/588 (96%), Gaps = 1/588 (0%)
 Strand = Plus / Plus

                                                                       
Query: 50  gaacaacccgcgtggcaacacaaagttggctgctggtgataagaaggtgatgggcacatt 109
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   gaacaacccgcgtggcaacacaaagttggctgctggtgataagaaggtgatgggcacatt 60

                                                                       
Query: 110 taagaatcttggacaaagcatgctcgagaatatccaggtgatcgagtcagcgtttcagca 169
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  taagaatcttggacaaagcatgctcgagaatatccaggtgatcgagtcagcgtttcagca 120

                                                                       
Query: 170 agatcgcagccagcccggcccgatggagaacttctcgaacaacatcctgggtggcaaagg 229
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 agatcgcagccagcccggcccgatggagaacttctcgaacaacatcctgggtggcaaagg 180

                                                                       
Query: 230 acaggtgaccgcgacggctgctctgaccgagctccgcaagatcagcaacttgctcagcga 289
           |||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||
Sbjct: 181 acaggtgaccgcgacggctgcnmtgaccgagctccgcaagatcagcaacttgctcagcga 240

                                                                       
Query: 290 gatgtaagcccttcaatgtaaggtgtaaccacacacaggccgtctgtccatgcccaaccc 349
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gatgtaagcccttcaatgtaaggtgtaaccacacacaggccgtctgtccatgcccaaccc 300

                                                                       
Query: 350 cgctctacctcagccaatcgatggcctggtgataacaggaagcgaggtgcctcggccatc 409
           ||||||||||||||||||||||||||||||||||||||    ||||||||||||||||||
Sbjct: 301 cgctctacctcagccaatcgatggcctggtgataacagnrrrcgaggtgcctcggccatc 360

                                                                       
Query: 410 ctgttcaccggtgctcctgcgctgcgctgtgctgctccatgtgtacatataggttccatt 469
           |||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ctgttcaccggtgctcctg-bstgcgctgtgctgctccatgtgtacatataggttccatt 419

                                                                       
Query: 470 gggatcattccattcgagtccatcatgtaactaattaaggcactgtacgtacgtacctaa 529
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 gggatcattccattcgagtccatcatgtaactaattaaggcactgtacgtacgtacctaa 479

                                                                       
Query: 530 ggaactccgatcaatcaatctaggtgtcgccgcgacgacgacggggcagtagtttacgtc 589
           ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 480 ggaactccgdtcaatcaatctaggtgtcgccgcgacgacgacggggcagtagtttacttc 539

                                                           
Query: 590 ggtcggcgttagagggaggtannnnnnngatggaagaattttgtaaga 637
           |||||||||||||||||||||       ||||||||||||||||||||
Sbjct: 540 ggtcggcgttagagggaggtatttttttgatggaagaattttgtaaga 587
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>emb|AJ606022.1| Triticum aestivum partial mRNA for putative microtubule-associated
           protein (p0700D12.21 gene)
          Length = 628

 Score =  505 bits (255), Expect = e-140
 Identities = 396/438 (90%), Gaps = 15/438 (3%)
 Strand = Plus / Plus

                                                                       
Query: 5   agatggtaaagacgctgttgatgcattctgctccgaagggaattcgaacaacccgcgtgg 64
           ||||||||| || |||||||| |||| ||||||||||||||||||||| |||||||||||
Sbjct: 95  agatggtaaggatgctgttgacgcatcctgctccgaagggaattcgaataacccgcgtgg 154

                                                                       
Query: 65  caacacaaagttggctgctggtgataagaaggtgatgggcacatttaagaatcttggaca 124
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 155 taacacaaagttggctgctggtgataagaaggtgatgggcacatttaagaatcttggaca 214

                                                                       
Query: 125 aagcatgctcgagaatatccaggtgatcgagtcagcgtttcagcaagatcgcagccagcc 184
           ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 215 aagcatgctcgagaatatccaggtgatcgagtcggcgtttcagcaagatcgcagccagcc 274

                                                                       
Query: 185 cggcccgatggagaacttctcgaacaacatcctgggtggcaaaggacaggtgaccgcgac 244
           ||||||||||||||||||||| |||||||||||||| |||||||||||||||||||| ||
Sbjct: 275 cggcccgatggagaacttctcaaacaacatcctgggcggcaaaggacaggtgaccgcaac 334

                                                                       
Query: 245 ggctgctctgaccgagctccgcaagatcagcaacttgctcagcgagatgtaagcccttca 304
            || |||||||||||||||||||||||||||||||||||||||||||||||   || || 
Sbjct: 335 cgcagctctgaccgagctccgcaagatcagcaacttgctcagcgagatgta--gccatcc 392

                                                                       
Query: 305 atgtaaggtgtaaccacacacaggccgtctgtccatgccca----accccgctctacctc 360
           |||||||| |  |  || |||||||||||||| | ||||||    ||||| ||||| |||
Sbjct: 393 atgtaaggcggca-tacccacaggccgtctgttcctgcccaacccacccctctctagctc 451

                                                                       
Query: 361 agccaatcgatggcc----tggtgataacaggaagcgaggtgcctcggccatcctgttca 416
           || || |||||||||    |||||||||||   |||||||||||||||||||| ||| ||
Sbjct: 452 ag-cagtcgatggcctgcctggtgataaca---agcgaggtgcctcggccatcttgtcca 507

                             
Query: 417 ccggtgctcctgcgctgc 434
           ||||||||||||||||||
Sbjct: 508 ccggtgctcctgcgctgc 525



 Score =  123 bits (62), Expect = 8e-25
 Identities = 69/70 (98%), Gaps = 1/70 (1%)
 Strand = Plus / Plus

                                                                       
Query: 477 ttccattcgagtccatcatgtaactaattaaggcac-tgtacgtacgtacctaaggaact 535
           |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 544 ttccattcgagtccatcatgtaactaattaaggcacttgtacgtacgtacctaaggaact 603

                     
Query: 536 ccgatcaatc 545
           ||||||||||
Sbjct: 604 ccgatcaatc 613



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 81/97 (83%), Gaps = 13/97 (13%)
 Strand = Plus / Plus

                                                                       
Query: 373 gcctggtgataacaggaagcgaggtgcctcggccatcctgttcaccggtgctcctgcgct 432
           ||||||||||||||   |||||||||||||||||||| ||| |||||||||||||||   
Sbjct: 467 gcctggtgataaca---agcgaggtgcctcggccatcttgtccaccggtgctcctgc--- 520

                                                
Query: 433 gcgctgtgctgctccatgtgtacatataggttccatt 469
                  |||||||||| |||||||||||||||||||
Sbjct: 521 -------gctgctccatatgtacatataggttccatt 550
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>ref|NM_189035.2| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3246

 Score =  186 bits (94), Expect = 6e-44
 Identities = 193/226 (85%)
 Strand = Plus / Plus

                                                                        
Query: 71   aaagttggctgctggtgataagaaggtgatgggcacatttaagaatcttggacaaagcat 130
            |||||||||| |||||||||| ||||| |||||||   | |||||||||||||||| |||
Sbjct: 2718 aaagttggcttctggtgataaaaaggtcatgggcagcctaaagaatcttggacaaaacat 2777

                                                                        
Query: 131  gctcgagaatatccaggtgatcgagtcagcgtttcagcaagatcgcagccagcccggccc 190
            ||| || |||||||||||||| ||||| || ||||||||||| ||  | ||||| |||||
Sbjct: 2778 gcttgaaaatatccaggtgattgagtcggcatttcagcaagaccgtggtcagcctggccc 2837

                                                                        
Query: 191  gatggagaacttctcgaacaacatcctgggtggcaaaggacaggtgaccgcgacggctgc 250
              ||||||||||||| |||||||| || || |||||||||||||| || || | ||||||
Sbjct: 2838 tgtggagaacttctcaaacaacattcttggaggcaaaggacaggtcactgcaatggctgc 2897

                                                          
Query: 251  tctgaccgagctccgcaagatcagcaacttgctcagcgagatgtaa 296
            |||||| ||||| ||||||||||||||  |||| ||||||||||||
Sbjct: 2898 tctgacggagcttcgcaagatcagcaatctgctgagcgagatgtaa 2943
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>dbj|AK066731.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013074L23, full
            insert sequence
          Length = 3245

 Score =  186 bits (94), Expect = 6e-44
 Identities = 193/226 (85%)
 Strand = Plus / Plus

                                                                        
Query: 71   aaagttggctgctggtgataagaaggtgatgggcacatttaagaatcttggacaaagcat 130
            |||||||||| |||||||||| ||||| |||||||   | |||||||||||||||| |||
Sbjct: 2717 aaagttggcttctggtgataaaaaggtcatgggcagcctaaagaatcttggacaaaacat 2776

                                                                        
Query: 131  gctcgagaatatccaggtgatcgagtcagcgtttcagcaagatcgcagccagcccggccc 190
            ||| || |||||||||||||| ||||| || ||||||||||| ||  | ||||| |||||
Sbjct: 2777 gcttgaaaatatccaggtgattgagtcggcatttcagcaagaccgtggtcagcctggccc 2836

                                                                        
Query: 191  gatggagaacttctcgaacaacatcctgggtggcaaaggacaggtgaccgcgacggctgc 250
              ||||||||||||| |||||||| || || |||||||||||||| || || | ||||||
Sbjct: 2837 tgtggagaacttctcaaacaacattcttggaggcaaaggacaggtcactgcaatggctgc 2896

                                                          
Query: 251  tctgaccgagctccgcaagatcagcaacttgctcagcgagatgtaa 296
            |||||| ||||| ||||||||||||||  |||| ||||||||||||
Sbjct: 2897 tctgacggagcttcgcaagatcagcaatctgctgagcgagatgtaa 2942
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>dbj|AK066492.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013074C01, full
            insert sequence
          Length = 1612

 Score =  186 bits (94), Expect = 6e-44
 Identities = 193/226 (85%)
 Strand = Plus / Plus

                                                                        
Query: 71   aaagttggctgctggtgataagaaggtgatgggcacatttaagaatcttggacaaagcat 130
            |||||||||| |||||||||| ||||| |||||||   | |||||||||||||||| |||
Sbjct: 1084 aaagttggcttctggtgataaaaaggtcatgggcagcctaaagaatcttggacaaaacat 1143

                                                                        
Query: 131  gctcgagaatatccaggtgatcgagtcagcgtttcagcaagatcgcagccagcccggccc 190
            ||| || |||||||||||||| ||||| || ||||||||||| ||  | ||||| |||||
Sbjct: 1144 gcttgaaaatatccaggtgattgagtcggcatttcagcaagaccgtggtcagcctggccc 1203

                                                                        
Query: 191  gatggagaacttctcgaacaacatcctgggtggcaaaggacaggtgaccgcgacggctgc 250
              ||||||||||||| |||||||| || || |||||||||||||| || || | ||||||
Sbjct: 1204 tgtggagaacttctcaaacaacattcttggaggcaaaggacaggtcactgcaatggctgc 1263

                                                          
Query: 251  tctgaccgagctccgcaagatcagcaacttgctcagcgagatgtaa 296
            |||||| ||||| ||||||||||||||  |||| ||||||||||||
Sbjct: 1264 tctgacggagcttcgcaagatcagcaatctgctgagcgagatgtaa 1309
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score =  119 bits (60), Expect = 1e-23
 Identities = 129/152 (84%)
 Strand = Plus / Plus

                                                                            
Query: 145      aggtgatcgagtcagcgtttcagcaagatcgcagccagcccggcccgatggagaacttct 204
                ||||||| ||||| || ||||||||||| ||  | ||||| |||||  ||||||||||||
Sbjct: 25709779 aggtgattgagtcggcatttcagcaagaccgtggtcagcctggccctgtggagaacttct 25709838

                                                                            
Query: 205      cgaacaacatcctgggtggcaaaggacaggtgaccgcgacggctgctctgaccgagctcc 264
                | |||||||| || || |||||||||||||| || || | |||||||||||| ||||| |
Sbjct: 25709839 caaacaacattcttggaggcaaaggacaggtcactgcaatggctgctctgacggagcttc 25709898

                                                
Query: 265      gcaagatcagcaacttgctcagcgagatgtaa 296
                |||||||||||||  |||| ||||||||||||
Sbjct: 25709899 gcaagatcagcaatctgctgagcgagatgtaa 25709930



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 68/78 (87%)
 Strand = Plus / Plus

                                                                            
Query: 71       aaagttggctgctggtgataagaaggtgatgggcacatttaagaatcttggacaaagcat 130
                |||||||||| |||||||||| ||||| |||||||   | |||||||||||||||| |||
Sbjct: 25709633 aaagttggcttctggtgataaaaaggtcatgggcagcctaaagaatcttggacaaaacat 25709692

                                  
Query: 131      gctcgagaatatccaggt 148
                ||| || |||||||||||
Sbjct: 25709693 gcttgaaaatatccaggt 25709710
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>dbj|AP004708.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0700D12
          Length = 145177

 Score =  119 bits (60), Expect = 1e-23
 Identities = 129/152 (84%)
 Strand = Plus / Plus

                                                                         
Query: 145   aggtgatcgagtcagcgtttcagcaagatcgcagccagcccggcccgatggagaacttct 204
             ||||||| ||||| || ||||||||||| ||  | ||||| |||||  ||||||||||||
Sbjct: 87527 aggtgattgagtcggcatttcagcaagaccgtggtcagcctggccctgtggagaacttct 87586

                                                                         
Query: 205   cgaacaacatcctgggtggcaaaggacaggtgaccgcgacggctgctctgaccgagctcc 264
             | |||||||| || || |||||||||||||| || || | |||||||||||| ||||| |
Sbjct: 87587 caaacaacattcttggaggcaaaggacaggtcactgcaatggctgctctgacggagcttc 87646

                                             
Query: 265   gcaagatcagcaacttgctcagcgagatgtaa 296
             |||||||||||||  |||| ||||||||||||
Sbjct: 87647 gcaagatcagcaatctgctgagcgagatgtaa 87678



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 68/78 (87%)
 Strand = Plus / Plus

                                                                         
Query: 71    aaagttggctgctggtgataagaaggtgatgggcacatttaagaatcttggacaaagcat 130
             |||||||||| |||||||||| ||||| |||||||   | |||||||||||||||| |||
Sbjct: 87381 aaagttggcttctggtgataaaaaggtcatgggcagcctaaagaatcttggacaaaacat 87440

                               
Query: 131   gctcgagaatatccaggt 148
             ||| || |||||||||||
Sbjct: 87441 gcttgaaaatatccaggt 87458
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>ref|NG_005550.2| Homo sapiens neuroblastoma breakpoint family, member 17 (pseudogene)
             (NBPF17P) on chromosome 1
          Length = 64687

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 472   gatcattccattcgagtccat 492
             |||||||||||||||||||||
Sbjct: 54859 gatcattccattcgagtccat 54839
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>emb|AL732363.8| Human DNA sequence from clone RP11-744H18 on chromosome 1 Contains a
             phosphodiesterase 4D interacting protein (myomegalin)
             (PDE4DIP) pseudogene and the 3' end of a novel pseudogene,
             complete sequence
          Length = 106538

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 472   gatcattccattcgagtccat 492
             |||||||||||||||||||||
Sbjct: 30900 gatcattccattcgagtccat 30920
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>gb|AC129338.2| Homo sapiens BAC clone RP11-51A19 from UL, complete sequence
          Length = 169277

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 472 gatcattccattcgagtccat 492
           |||||||||||||||||||||
Sbjct: 32  gatcattccattcgagtccat 12
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>gb|AC127701.2| Homo sapiens BAC clone RP11-79F18 from UL, complete sequence
          Length = 161405

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 472    gatcattccattcgagtccat 492
              |||||||||||||||||||||
Sbjct: 144898 gatcattccattcgagtccat 144918



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 472    gatcattccattcgagtccat 492
              |||||||||||||||||||||
Sbjct: 102188 gatcattccattcgagtccat 102208



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 472   gatcattccattcgagtccat 492
             |||||||||||||||||||||
Sbjct: 16315 gatcattccattcgagtccat 16295
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>gb|AC163282.3| Mus musculus BAC clone RP23-454I20 from chromosome 12, complete sequence
          Length = 202583

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 426    ctgcgctgcgctgtgctgctc 446
              |||||||||||||||||||||
Sbjct: 160598 ctgcgctgcgctgtgctgctc 160618
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>gb|AC159912.9| Mus musculus 6 BAC RP24-314B1 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 178951

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 122    acaaagcatgctcgagaatatccag 146
              ||||||||||||| |||||||||||
Sbjct: 151106 acaaagcatgctctagaatatccag 151130
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>gb|AC157101.9| Mus musculus 6 BAC RP24-549J13 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 167974

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 122   acaaagcatgctcgagaatatccag 146
             ||||||||||||| |||||||||||
Sbjct: 29207 acaaagcatgctctagaatatccag 29231
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>gb|AC011293.5|AC011293 Homo sapiens BAC clone RP11-75F5 from Y, complete sequence
          Length = 159722

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 472   gatcattccattcgagtccat 492
             |||||||||||||||||||||
Sbjct: 33908 gatcattccattcgagtccat 33888
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>gb|AC019340.6| Homo sapiens BAC clone RP11-715L17 from 7, complete sequence
          Length = 190137

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 472   gatcattccattcgagtccat 492
             |||||||||||||||||||||
Sbjct: 71823 gatcattccattcgagtccat 71803



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 472   gatcattccattcgagtccat 492
             |||||||||||||||||||||
Sbjct: 29113 gatcattccattcgagtccat 29093
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>gb|AC154578.2| Mus musculus BAC clone RP23-375N17 from 16, complete sequence
          Length = 203029

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 210   aacatcctgggtggcaaagga 230
             |||||||||||||||||||||
Sbjct: 25811 aacatcctgggtggcaaagga 25791
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>emb|CT030161.10| Mouse DNA sequence from clone RP23-235H10 on chromosome 12, complete
              sequence
          Length = 234471

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 426    ctgcgctgcgctgtgctgctc 446
              |||||||||||||||||||||
Sbjct: 219248 ctgcgctgcgctgtgctgctc 219228
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>emb|CT010569.11| Mouse DNA sequence from clone RP23-237G24 on chromosome 16, complete
              sequence
          Length = 238459

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 210    aacatcctgggtggcaaagga 230
              |||||||||||||||||||||
Sbjct: 212649 aacatcctgggtggcaaagga 212669
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>gb|AC134594.5| Mus musculus BAC clone RP23-388B6 from 12, complete sequence
          Length = 194521

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 426    ctgcgctgcgctgtgctgctc 446
              |||||||||||||||||||||
Sbjct: 173322 ctgcgctgcgctgtgctgctc 173302
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>gb|AC150278.1| Pan troglodytes BAC clone CH251-126G17 from Y, complete sequence
          Length = 171976

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 473 atcattccattcgagtccat 492
           ||||||||||||||||||||
Sbjct: 535 atcattccattcgagtccat 516
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>gb|BC070857.1| Xenopus laevis hypothetical protein MGC84608, mRNA (cDNA clone
           MGC:84608 IMAGE:6641099), complete cds
          Length = 2767

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 93  aaggtgatgggcacatttaa 112
           ||||||||||||||||||||
Sbjct: 443 aaggtgatgggcacatttaa 424
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>gb|AC159631.2| Mus musculus BAC clone RP24-177F21 from chromosome 12, complete sequence
          Length = 171538

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 91     agaaggtgatgggcacattt 110
              ||||||||||||||||||||
Sbjct: 116503 agaaggtgatgggcacattt 116522
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>gb|AC134879.3| Homo sapiens BAC clone RP11-295P22 from Y, complete sequence
          Length = 205515

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 475   cattccattcgagtccatca 494
             ||||||||||||||||||||
Sbjct: 98994 cattccattcgagtccatca 99013
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>gb|AC101490.8| Mus musculus chromosome 3, clone RP23-188O2, complete sequence
          Length = 247848

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 64     gcaacacaaagttggctgct 83
              ||||||||||||||||||||
Sbjct: 132234 gcaacacaaagttggctgct 132253
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>gb|AE016795.2| Vibrio vulnificus CMCP6 chromosome I complete sequence
          Length = 3281944

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 61     gtggcaacacaaagttggct 80
              ||||||||||||||||||||
Sbjct: 534949 gtggcaacacaaagttggct 534930
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>emb|AL133216.10| Human DNA sequence from clone RP11-291L22 on chromosome 10 Contains the
              3' end of a gene for a novel protein similar to
              17-beta-hydroxysteroid dehydrogenase type 7 (HSD17B7), the
              gene for a novel protein similar to CDC10 cell division
              cycle 10, homolog (S. cerevisiae) (CDC10), a novel gene, a
              novel gene containing FLJ14186, a capicua homolog
              (Drosophila) (CIC) pseudogene and a CpG island, complete
              sequence
          Length = 166835

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 475    cattccattcgagtccatca 494
              ||||||||||||||||||||
Sbjct: 166225 cattccattcgagtccatca 166206
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>emb|BX294134.1| Pirellula sp. strain 1 complete genome; segment 2/24
          Length = 304450

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 163    ttcagcaagatcgcagccag 182
              ||||||||||||||||||||
Sbjct: 270425 ttcagcaagatcgcagccag 270444
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>dbj|BS000654.1| Pan troglodytes chromosome Y clone:PTB-129E12, complete sequences
          Length = 193714

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 475    cattccattcgagtccatca 494
              ||||||||||||||||||||
Sbjct: 169092 cattccattcgagtccatca 169111



 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 473   atcattccattcgagtccat 492
             ||||||||||||||||||||
Sbjct: 96732 atcattccattcgagtccat 96751
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>gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence
          Length = 23952694

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 475     cattccattcgagtccatca 494
               ||||||||||||||||||||
Sbjct: 6013841 cattccattcgagtccatca 6013860



 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 473     atcattccattcgagtccat 492
               ||||||||||||||||||||
Sbjct: 5941516 atcattccattcgagtccat 5941535
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>dbj|AP007152.1| Aspergillus oryzae RIB40 genomic DNA, SC308
          Length = 51359

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 129   atgctcgagaatatccaggt 148
             ||||||||||||||||||||
Sbjct: 11082 atgctcgagaatatccaggt 11101
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>gb|AC026405.5| Homo sapiens chromosome 5 clone CTC-347N9, complete sequence
          Length = 168779

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 259   agctccgcaagatcagcaac 278
             ||||||||||||||||||||
Sbjct: 73529 agctccgcaagatcagcaac 73548
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>dbj|AK036360.1| Mus musculus 16 days neonate cerebellum cDNA, RIKEN full-length
           enriched library, clone:9630060M03 product:protein
           phosphatase 1, regulatory (inhibitor) subunit 1C, full
           insert sequence
          Length = 2385

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 23  tgatgcattctgctccgaag 42
           ||||||||||||||||||||
Sbjct: 358 tgatgcattctgctccgaag 377
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>gb|AC158382.2| Mus musculus BAC clone RP24-105N17 from chromosome 12, complete
             sequence
          Length = 166347

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 91    agaaggtgatgggcacattt 110
             ||||||||||||||||||||
Sbjct: 43185 agaaggtgatgggcacattt 43204
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>gb|AC172374.4| Pan troglodytes BAC clone CH251-119H6 from chromosome y, complete
             sequence
          Length = 176115

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 475   cattccattcgagtccatca 494
             ||||||||||||||||||||
Sbjct: 47507 cattccattcgagtccatca 47526
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>gb|AC018696.4| Homo sapiens BAC clone RP11-575H3 from 2, complete sequence
          Length = 194995

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 469    tgggatcattccattcgagtccat 492
              |||||| |||||||||||||||||
Sbjct: 177535 tgggatgattccattcgagtccat 177512
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>gb|AC150909.3| Pan troglodytes BAC clone CH251-1056O7 from chromosome y, complete
              sequence
          Length = 178039

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 475    cattccattcgagtccatca 494
              ||||||||||||||||||||
Sbjct: 174548 cattccattcgagtccatca 174567



 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 473    atcattccattcgagtccat 492
              ||||||||||||||||||||
Sbjct: 102223 atcattccattcgagtccat 102242
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>gb|AC156805.2| Pan troglodytes BAC clone CH251-830G14 from chromosome y, complete
              sequence
          Length = 230623

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 473    atcattccattcgagtccat 492
              ||||||||||||||||||||
Sbjct: 167430 atcattccattcgagtccat 167411



 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 475   cattccattcgagtccatca 494
             ||||||||||||||||||||
Sbjct: 95105 cattccattcgagtccatca 95086
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>gb|AC137499.2| Homo sapiens chromosome 16 clone RP11-317D10, complete sequence
          Length = 159831

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 473   atcattccattcgagtccat 492
             ||||||||||||||||||||
Sbjct: 34787 atcattccattcgagtccat 34768
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>gb|AC130474.12| Mus musculus chromosome 7, clone RP23-178C20, complete sequence
          Length = 232792

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 268    agatcagcaacttgctcagc 287
              ||||||||||||||||||||
Sbjct: 129174 agatcagcaacttgctcagc 129193
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>emb|AJ609644.1| Wolbachia pipientis partial gltA gene for citrate synthase
          Length = 636

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 18  gctgttgatgcattctgctc 37
           ||||||||||||||||||||
Sbjct: 557 gctgttgatgcattctgctc 538


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,153,372
Number of Sequences: 3902068
Number of extensions: 4153372
Number of successful extensions: 80496
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 77025
Number of HSP's gapped (non-prelim): 3467
length of query: 637
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 614
effective length of database: 17,143,297,704
effective search space: 10525984790256
effective search space used: 10525984790256
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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