>Y1610_METJA (Q59005) Hypothetical glycosyl hydrolase MJ1610 (EC 3.2.1.-)|
          Length = 615

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 14/44 (31%), Positives = 23/44 (52%), Gaps = 3/44 (6%)
 Frame = +1

Query: 130 SLYFKRLYLFDRDSDSGETNAHVFKSTSPFRW---YHFHNVFTQ 252
           SLY++RLY   ++ D    + ++ KS   F W   Y F  +F +
Sbjct: 537 SLYYRRLYKVLKEKDDNGADIYLQKSKKLFNWVMKYSFDGLFPE 580

>MDL1_YEAST (P33310) ATP-dependent permease MDL1, mitochondrial precursor (ABC|
           transporter MDL1) (Multidrug resistance-like protein 1)
          Length = 695

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 19/53 (35%), Positives = 28/53 (52%), Gaps = 5/53 (9%)
 Frame = +2

Query: 182 KPTPTSSNRRARSDGI-----IFIMFSHNENDHVPLALLLALFEREQFPAIPS 325
           KPT   SN  ++S G      +F++ S  E+ ++ LALLL L       A+PS
Sbjct: 71  KPTLKLSNANSKSSGFKDIKRLFVL-SKPESKYIGLALLLILISSSVSMAVPS 122

>ROS1_ARATH (Q9SJQ6) ROS1 protein (Repressor of silencing 1) (DEMETER-like|
           protein 1)
          Length = 1393

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 12/47 (25%), Positives = 25/47 (53%)
 Frame = +2

Query: 221 DGIIFIMFSHNENDHVPLALLLALFEREQFPAIPSANSLHXFRSIPS 361
           D ++ +  + N +DH+  +  ++L  +   P +PS+N      S+PS
Sbjct: 598 DSVVGVFLTQNVSDHLSSSAFMSLASQFPVPFVPSSNFDAGTSSMPS 644


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 55,233,381
Number of Sequences: 219361
Number of extensions: 1088983
Number of successful extensions: 2061
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2019
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2061
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 1402043640
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)