| Clone Name | baal23i01 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_197476.1| Oryza sativa (japonica cultivar-group) putative glutathione S-transferase (OSJNBb0038A07.10), mRNA Length = 1008 Score = 44.1 bits (22), Expect = 0.32 Identities = 34/38 (89%) Strand = Plus / Plus Query: 333 ccgttcgcgctgcgagtgaggctagcgctcaacttcaa 370 |||||||||||||||| || ||| ||||||| |||||| Sbjct: 105 ccgttcgcgctgcgagcgaagctcgcgctcagcttcaa 142
>ref|NM_197445.1| Oryza sativa (japonica cultivar-group) putative glutathione S-transferase (OSJNBb0005J14.12), mRNA Length = 699 Score = 44.1 bits (22), Expect = 0.32 Identities = 34/38 (89%) Strand = Plus / Plus Query: 333 ccgttcgcgctgcgagtgaggctagcgctcaacttcaa 370 |||||||||||||||| || ||| ||||||| |||||| Sbjct: 49 ccgttcgcgctgcgagcgaagctcgcgctcagcttcaa 86
>gb|AC100927.11| Mus musculus chromosome 3, clone RP23-72A21, complete sequence Length = 196709 Score = 44.1 bits (22), Expect = 0.32 Identities = 22/22 (100%) Strand = Plus / Plus Query: 274 aagaagtggcaggaggggaaga 295 |||||||||||||||||||||| Sbjct: 118148 aagaagtggcaggaggggaaga 118169
>gb|AF309379.1| Oryza sativa (japonica cultivar-group) clone S2148_A putative glutathione S-transferase OsGSTU3 mRNA, complete cds Length = 947 Score = 44.1 bits (22), Expect = 0.32 Identities = 34/38 (89%) Strand = Plus / Plus Query: 333 ccgttcgcgctgcgagtgaggctagcgctcaacttcaa 370 |||||||||||||||| || ||| ||||||| |||||| Sbjct: 116 ccgttcgcgctgcgagcgaagctcgcgctcagcttcaa 153
>gb|AY271620.1| Oryza sativa (indica cultivar-group) tau class GST protein 3 mRNA, complete cds Length = 943 Score = 44.1 bits (22), Expect = 0.32 Identities = 34/38 (89%) Strand = Plus / Plus Query: 333 ccgttcgcgctgcgagtgaggctagcgctcaacttcaa 370 |||||||||||||||| || ||| ||||||| |||||| Sbjct: 105 ccgttcgcgctgcgagcgaagctcgcgctcagcttcaa 142
>gb|AC091680.7| Oryza sativa chromosome 10 BAC OSJNBa0034L04 genomic sequence, complete sequence Length = 148611 Score = 44.1 bits (22), Expect = 0.32 Identities = 34/38 (89%) Strand = Plus / Minus Query: 333 ccgttcgcgctgcgagtgaggctagcgctcaacttcaa 370 |||||||||||||||| || ||| ||||||| |||||| Sbjct: 67660 ccgttcgcgctgcgagcgaagctcgcgctcagcttcaa 67623
>gb|AC113948.5| Oryza sativa chromosome 10 BAC OSJNBb0038A07 genomic sequence, complete sequence Length = 132900 Score = 44.1 bits (22), Expect = 0.32 Identities = 34/38 (89%) Strand = Plus / Minus Query: 333 ccgttcgcgctgcgagtgaggctagcgctcaacttcaa 370 |||||||||||||||| || ||| ||||||| |||||| Sbjct: 125961 ccgttcgcgctgcgagcgaagctcgcgctcagcttcaa 125924
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 44.1 bits (22), Expect = 0.32 Identities = 34/38 (89%) Strand = Plus / Plus Query: 333 ccgttcgcgctgcgagtgaggctagcgctcaacttcaa 370 |||||||||||||||| || ||| ||||||| |||||| Sbjct: 20040530 ccgttcgcgctgcgagcgaagctcgcgctcagcttcaa 20040567 Score = 44.1 bits (22), Expect = 0.32 Identities = 34/38 (89%) Strand = Plus / Plus Query: 333 ccgttcgcgctgcgagtgaggctagcgctcaacttcaa 370 |||||||||||||||| || ||| ||||||| |||||| Sbjct: 19918794 ccgttcgcgctgcgagcgaagctcgcgctcagcttcaa 19918831
>gb|AC074232.11| Oryza sativa chromosome 10 BAC OSJNBb0005J14 genomic sequence, complete sequence Length = 116932 Score = 44.1 bits (22), Expect = 0.32 Identities = 34/38 (89%) Strand = Plus / Minus Query: 333 ccgttcgcgctgcgagtgaggctagcgctcaacttcaa 370 |||||||||||||||| || ||| ||||||| |||||| Sbjct: 67249 ccgttcgcgctgcgagcgaagctcgcgctcagcttcaa 67212
>dbj|AK073944.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033071L17, full insert sequence Length = 928 Score = 44.1 bits (22), Expect = 0.32 Identities = 34/38 (89%) Strand = Plus / Plus Query: 333 ccgttcgcgctgcgagtgaggctagcgctcaacttcaa 370 |||||||||||||||| || ||| ||||||| |||||| Sbjct: 117 ccgttcgcgctgcgagcgaagctcgcgctcagcttcaa 154
>dbj|AK061304.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-H02, full insert sequence Length = 929 Score = 44.1 bits (22), Expect = 0.32 Identities = 34/38 (89%) Strand = Plus / Plus Query: 333 ccgttcgcgctgcgagtgaggctagcgctcaacttcaa 370 |||||||||||||||| || ||| ||||||| |||||| Sbjct: 116 ccgttcgcgctgcgagcgaagctcgcgctcagcttcaa 153
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 44.1 bits (22), Expect = 0.32 Identities = 34/38 (89%) Strand = Plus / Plus Query: 333 ccgttcgcgctgcgagtgaggctagcgctcaacttcaa 370 |||||||||||||||| || ||| ||||||| |||||| Sbjct: 20051806 ccgttcgcgctgcgagcgaagctcgcgctcagcttcaa 20051843 Score = 44.1 bits (22), Expect = 0.32 Identities = 34/38 (89%) Strand = Plus / Plus Query: 333 ccgttcgcgctgcgagtgaggctagcgctcaacttcaa 370 |||||||||||||||| || ||| ||||||| |||||| Sbjct: 19930070 ccgttcgcgctgcgagcgaagctcgcgctcagcttcaa 19930107
>gb|DQ481668.1| Takifugu rubripes HoxDa gene cluster, complete sequence Length = 366816 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 224 cgtaccctcgtcctccacca 243 |||||||||||||||||||| Sbjct: 253589 cgtaccctcgtcctccacca 253570
>emb|AL645966.30| Mouse DNA sequence from clone DN-144H19 on chromosome 3 Contains the 3' end of the Il21 gene for interleukin 21, a novel pseudogene (D530049N12RIK), a novel gene (C030047M16RIK), the Il2 gene for interleukin 2, the Tenr gene for testis nuclear RNA binding protein, a NADH dehydrogenase subunit 5 (ND5) pseudogene and a putative S1 RNA binding domain protein (PS1D) (2810055E05RIK) pseudogene, complete sequence Length = 161393 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 270 gaggaagaagtggcaggagg 289 |||||||||||||||||||| Sbjct: 21952 gaggaagaagtggcaggagg 21971
>dbj|AP003061.3| Homo sapiens genomic DNA, chromosome 11 clone:RP11-100P11, complete sequence Length = 176129 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 310 agctcctggggacatggagg 329 |||||||||||||||||||| Sbjct: 92757 agctcctggggacatggagg 92738 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,830,577 Number of Sequences: 3902068 Number of extensions: 1830577 Number of successful extensions: 28676 Number of sequences better than 10.0: 16 Number of HSP's better than 10.0 without gapping: 18 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 28591 Number of HSP's gapped (non-prelim): 85 length of query: 372 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 350 effective length of database: 17,147,199,772 effective search space: 6001519920200 effective search space used: 6001519920200 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)