ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal23h02 |
|---|---|
| Clone Library Name | barley_pub |
>PSAL_HORVU (P23993) Photosystem I reaction center subunit XI, chloroplast| precursor (PSI-L) (PSI subunit V) Length = 209 Score = 236 bits (602), Expect = 2e-62 Identities = 118/127 (92%), Positives = 118/127 (92%) Frame = +2 Query: 2 AYRTAVSPLLRGIEVGLAHGYLLVGPFALTGPLRNTPVHGQAGTLGAIGLVSILSVCLTM 181 AYRTAVSPLLRGIEVGLAHGYLLVGPFALTGPLRNTPVHGQAGTLGAIGLVSILSVCLTM Sbjct: 83 AYRTAVSPLLRGIEVGLAHGYLLVGPFALTGPLRNTPVHGQAGTLGAIGLVSILSVCLTM 142 Query: 182 YGVASFNEGEPSTAPVLTLTGRKKEADKLQTAEGWSQXXXXXXXXXVSGAVWAYFLLYVL 361 YGVASFNEGEPSTAPVLTLTGRKKEADKLQTAEGWSQ VSGAVWAYFLLYVL Sbjct: 143 YGVASFNEGEPSTAPVLTLTGRKKEADKLQTAEGWSQFTGGFFFGGVSGAVWAYFLLYVL 202 Query: 362 DLPYFFK 382 DLPYFFK Sbjct: 203 DLPYFFK 209
>PSAL_CUCSA (Q39654) Photosystem I reaction center subunit XI, chloroplast| precursor (PSI-L) (PSI subunit V) Length = 217 Score = 187 bits (475), Expect = 1e-47 Identities = 92/127 (72%), Positives = 101/127 (79%) Frame = +2 Query: 2 AYRTAVSPLLRGIEVGLAHGYLLVGPFALTGPLRNTPVHGQAGTLGAIGLVSILSVCLTM 181 AYRTAVSPLLRGIEVGLAHG+ LVGPF GPLRNT G AG+L A GL+ ILSVCLTM Sbjct: 91 AYRTAVSPLLRGIEVGLAHGFFLVGPFVKAGPLRNTAYAGGAGSLAAGGLIVILSVCLTM 150 Query: 182 YGVASFNEGEPSTAPVLTLTGRKKEADKLQTAEGWSQXXXXXXXXXVSGAVWAYFLLYVL 361 YGVASFNEGEPSTAP LTLTGRKK D LQTA+GW++ +SG +WAYFLLYVL Sbjct: 151 YGVASFNEGEPSTAPSLTLTGRKKTPDPLQTADGWAKFSGGFFFGGISGVIWAYFLLYVL 210 Query: 362 DLPYFFK 382 DLPY+ K Sbjct: 211 DLPYYVK 217
>PSAL_SPIOL (Q41385) Photosystem I reaction center subunit XI, chloroplast| precursor (PSI-L) (PSI subunit V) Length = 216 Score = 182 bits (461), Expect = 4e-46 Identities = 87/127 (68%), Positives = 101/127 (79%) Frame = +2 Query: 2 AYRTAVSPLLRGIEVGLAHGYLLVGPFALTGPLRNTPVHGQAGTLGAIGLVSILSVCLTM 181 AYRTAV+PLLRG+EVGLAHG+LLVGPF GPLRNT G AG+L A GLV ILS+CLTM Sbjct: 90 AYRTAVNPLLRGVEVGLAHGFLLVGPFVKAGPLRNTEYAGAAGSLAAAGLVVILSMCLTM 149 Query: 182 YGVASFNEGEPSTAPVLTLTGRKKEADKLQTAEGWSQXXXXXXXXXVSGAVWAYFLLYVL 361 YG+ASF EGEPS AP LTLTGRKK+ D+LQ+A+GW++ VSG WA FL+YVL Sbjct: 150 YGIASFKEGEPSIAPALTLTGRKKQPDQLQSADGWAKFTGGFFFGGVSGVTWACFLMYVL 209 Query: 362 DLPYFFK 382 DLPY+FK Sbjct: 210 DLPYYFK 216
>PSAL_ARATH (Q9SUI4) Photosystem I reaction center subunit XI, chloroplast| precursor (PSI-L) (PSI subunit V) Length = 219 Score = 179 bits (455), Expect = 2e-45 Identities = 85/126 (67%), Positives = 99/126 (78%) Frame = +2 Query: 5 YRTAVSPLLRGIEVGLAHGYLLVGPFALTGPLRNTPVHGQAGTLGAIGLVSILSVCLTMY 184 YRTAV+PLLRG+EVGLAHG+ LVGPF GPLRNT G AG+L A GLV ILS+CLT+Y Sbjct: 94 YRTAVNPLLRGVEVGLAHGFFLVGPFVKAGPLRNTAYAGSAGSLAAAGLVVILSMCLTIY 153 Query: 185 GVASFNEGEPSTAPVLTLTGRKKEADKLQTAEGWSQXXXXXXXXXVSGAVWAYFLLYVLD 364 G++SF EGEPS AP LTLTGRKK+ D+LQTA+GW++ +SG WAYFLLYVLD Sbjct: 154 GISSFKEGEPSIAPSLTLTGRKKQPDQLQTADGWAKFTGGFFFGGISGVTWAYFLLYVLD 213 Query: 365 LPYFFK 382 LPYF K Sbjct: 214 LPYFVK 219
>PSAL_GRATL (Q6B8P4) Photosystem I reaction center subunit XI (PSI-L) (PSI| subunit V) Length = 150 Score = 105 bits (262), Expect = 5e-23 Identities = 56/117 (47%), Positives = 70/117 (59%) Frame = +2 Query: 2 AYRTAVSPLLRGIEVGLAHGYLLVGPFALTGPLRNTPVHGQAGTLGAIGLVSILSVCLTM 181 AYR +SPLLRG+E+G+AHGY LVGPF GPLRNT V +G L A+GL+ IL+VCL+M Sbjct: 36 AYRRGLSPLLRGLEIGMAHGYFLVGPFDKLGPLRNTDVALLSGFLSAVGLIIILTVCLSM 95 Query: 182 YGVASFNEGEPSTAPVLTLTGRKKEADKLQTAEGWSQXXXXXXXXXVSGAVWAYFLL 352 YG SF++ + D LQT EGW Q V G+ +AY LL Sbjct: 96 YGNVSFDKDDAK--------------DLLQTTEGWGQFTAGFLVGAVGGSGFAYLLL 138
>PSAL_PORPU (P51222) Photosystem I reaction center subunit XI (PSI-L) (PSI| subunit V) Length = 153 Score = 103 bits (257), Expect = 2e-22 Identities = 55/117 (47%), Positives = 67/117 (57%) Frame = +2 Query: 2 AYRTAVSPLLRGIEVGLAHGYLLVGPFALTGPLRNTPVHGQAGTLGAIGLVSILSVCLTM 181 AYR +SPLLRG+E+G+AHGY L+GPF GPLR T V AG L ++GL+ IL+ CL+M Sbjct: 36 AYRRGLSPLLRGLEIGMAHGYFLIGPFDKLGPLRGTDVALLAGFLSSVGLIIILTTCLSM 95 Query: 182 YGVASFNEGEPSTAPVLTLTGRKKEADKLQTAEGWSQXXXXXXXXXVSGAVWAYFLL 352 YG SF R D LQTAEGW Q V G+ +AY LL Sbjct: 96 YGNVSFT--------------RSDSKDPLQTAEGWGQFTAGFLVGAVGGSGFAYLLL 138
>PSAL_GUITH (O78469) Photosystem I reaction center subunit XI (PSI-L) (PSI| subunit V) Length = 152 Score = 100 bits (248), Expect = 2e-21 Identities = 50/117 (42%), Positives = 68/117 (58%) Frame = +2 Query: 2 AYRTAVSPLLRGIEVGLAHGYLLVGPFALTGPLRNTPVHGQAGTLGAIGLVSILSVCLTM 181 AYR +SPLLRG+E+G+ HGY LVGPF GPLRN+ V AG A+GL+ I++ CL + Sbjct: 36 AYRAGLSPLLRGLEIGMTHGYFLVGPFYKLGPLRNSEVALLAGVFSALGLIIIMAACLAI 95 Query: 182 YGVASFNEGEPSTAPVLTLTGRKKEADKLQTAEGWSQXXXXXXXXXVSGAVWAYFLL 352 YGV SFN + ++LQ+A+GW Q + GA +AY L+ Sbjct: 96 YGVVSFNTND--------------GGEQLQSAKGWRQFTSGWLVGSIGGASFAYILI 138
>PSAL_CYACA (Q9TM17) Photosystem I reaction center subunit XI (PSI-L) (PSI| subunit V) Length = 152 Score = 99.4 bits (246), Expect = 3e-21 Identities = 50/116 (43%), Positives = 68/116 (58%) Frame = +2 Query: 5 YRTAVSPLLRGIEVGLAHGYLLVGPFALTGPLRNTPVHGQAGTLGAIGLVSILSVCLTMY 184 YR +SPLLRG+E+G+AHGY ++GPF GPLRNT + +G + AIGL+ I S+ + +Y Sbjct: 37 YRRGLSPLLRGLEIGMAHGYFIIGPFYKLGPLRNTDLSLLSGLIAAIGLIIISSIAMIIY 96 Query: 185 GVASFNEGEPSTAPVLTLTGRKKEADKLQTAEGWSQXXXXXXXXXVSGAVWAYFLL 352 G+ +F+ E + DKLQTA GW Q V GA +AY LL Sbjct: 97 GIVTFDNSENN--------------DKLQTANGWRQLASGFLLGAVGGAGFAYILL 138
>PSAL_SYNY3 (P37277) Photosystem I reaction center subunit XI (PSI-L) (PSI| subunit V) Length = 157 Score = 95.9 bits (237), Expect = 4e-20 Identities = 48/117 (41%), Positives = 67/117 (57%) Frame = +2 Query: 2 AYRTAVSPLLRGIEVGLAHGYLLVGPFALTGPLRNTPVHGQAGTLGAIGLVSILSVCLTM 181 AYR +SP+LRG+EVG+AHGY L+GP+ L GPLR++ G +GA+ L+ + + L+ Sbjct: 39 AYRKGLSPILRGLEVGMAHGYFLIGPWTLLGPLRDSEYQYIGGLIGALALILVATAALSS 98 Query: 182 YGVASFNEGEPSTAPVLTLTGRKKEADKLQTAEGWSQXXXXXXXXXVSGAVWAYFLL 352 YG+ +F G + D LQTA+GWSQ + GA AYFLL Sbjct: 99 YGLVTFQ-------------GEQGSGDTLQTADGWSQFAAGFFVGGMGGAFVAYFLL 142
>PSAL_SYNP7 (P95822) Photosystem I reaction center subunit XI (PSI-L) (PSI| subunit V) Length = 166 Score = 94.7 bits (234), Expect = 9e-20 Identities = 50/115 (43%), Positives = 69/115 (60%) Frame = +2 Query: 5 YRTAVSPLLRGIEVGLAHGYLLVGPFALTGPLRNTPVHGQAGTLGAIGLVSILSVCLTMY 184 YR +S RG+E+G+AHG+LL GPF++ GPLRNT G AG L +GLV IL+VCL++Y Sbjct: 37 YRRGLSSNRRGLEIGMAHGFLLYGPFSILGPLRNTETAGSAGLLATVGLVVILTVCLSLY 96 Query: 185 GVASFNEGEPSTAPVLTLTGRKKEADKLQTAEGWSQXXXXXXXXXVSGAVWAYFL 349 G N G +A T+T +L T EGWS+ + GA +A++L Sbjct: 97 G----NAGSGPSAAESTVT-TPNPPQELFTKEGWSEFTSGFILGGLGGAFFAFYL 146
>PSAL_SYNEL (Q8DGB4) Photosystem I reaction center subunit XI (PSI-L) (PSI| subunit V) Length = 155 Score = 94.0 bits (232), Expect = 1e-19 Identities = 47/117 (40%), Positives = 66/117 (56%) Frame = +2 Query: 2 AYRTAVSPLLRGIEVGLAHGYLLVGPFALTGPLRNTPVHGQAGTLGAIGLVSILSVCLTM 181 AYR +SP+LRG+EVG+AHGY L+GP+ GPLR++ V G + I L+ + + CL Sbjct: 37 AYRQGLSPILRGLEVGMAHGYFLIGPWVKLGPLRDSDVANLGGLISGIALILVATACLAA 96 Query: 182 YGVASFNEGEPSTAPVLTLTGRKKEADKLQTAEGWSQXXXXXXXXXVSGAVWAYFLL 352 YG+ SF +G S +D L+T+EGWSQ + A A+FLL Sbjct: 97 YGLVSFQKGGSS-------------SDPLKTSEGWSQFTAGFFVGAMGSAFVAFFLL 140
>PSAL_CYAME (Q85FP8) Photosystem I reaction center subunit XI (PSI-L) (PSI| subunit V) Length = 140 Score = 93.6 bits (231), Expect = 2e-19 Identities = 48/116 (41%), Positives = 64/116 (55%) Frame = +2 Query: 5 YRTAVSPLLRGIEVGLAHGYLLVGPFALTGPLRNTPVHGQAGTLGAIGLVSILSVCLTMY 184 YR VSP LRG+E+G+AHGY L+GPF GPLRNT + AG L AIGL+ IL++ + +Y Sbjct: 37 YRRGVSPFLRGLEIGMAHGYFLIGPFVQLGPLRNTDIKYLAGLLSAIGLIVILTLGMLLY 96 Query: 185 GVASFNEGEPSTAPVLTLTGRKKEADKLQTAEGWSQXXXXXXXXXVSGAVWAYFLL 352 G SF ++ L++ +GW Q V GA +AY LL Sbjct: 97 GAVSFT----------------NDSQDLESVDGWRQLASGFLLGAVGGAGFAYLLL 136
>PSAL_SYNP2 (Q54753) Photosystem I reaction center subunit XI (PSI-L) (PSI| subunit V) Length = 152 Score = 93.6 bits (231), Expect = 2e-19 Identities = 52/123 (42%), Positives = 67/123 (54%) Frame = +2 Query: 5 YRTAVSPLLRGIEVGLAHGYLLVGPFALTGPLRNTPVHGQAGTLGAIGLVSILSVCLTMY 184 YR +S RG+EVG+AHGY L GPFAL GPLRN G AG LG +GL+S+L++ L++Y Sbjct: 35 YRQGLSAQRRGLEVGMAHGYFLYGPFALLGPLRNADFAGVAGLLGTVGLISLLTLALSLY 94 Query: 185 GVASFNEGEPSTAPVLTLTGRKKEADKLQTAEGWSQXXXXXXXXXVSGAVWAYFLLYVLD 364 G + P TLT + L T EGWS+ GA+ AY L L Sbjct: 95 GSVGV------STPTATLT-TPNPPENLGTKEGWSEFAAGFLIGGCGGALVAYGLCIALP 147 Query: 365 LPY 373 + Y Sbjct: 148 MMY 150
>PSAL_SYNP6 (P31084) Photosystem I reaction center subunit XI (PSI-L) (PSI| subunit V) Length = 165 Score = 92.4 bits (228), Expect = 4e-19 Identities = 49/115 (42%), Positives = 68/115 (59%) Frame = +2 Query: 5 YRTAVSPLLRGIEVGLAHGYLLVGPFALTGPLRNTPVHGQAGTLGAIGLVSILSVCLTMY 184 YR +S RG+E+G+AHG+LL GP ++ GPLRNT G AG L +GLV IL+VCL++Y Sbjct: 36 YRRGLSSNRRGLEIGMAHGFLLYGPLSILGPLRNTETAGSAGLLATVGLVVILTVCLSLY 95 Query: 185 GVASFNEGEPSTAPVLTLTGRKKEADKLQTAEGWSQXXXXXXXXXVSGAVWAYFL 349 G N G +A T+T +L T EGWS+ + GA +A++L Sbjct: 96 G----NAGSGPSAAESTVT-TPNPPQELFTKEGWSEFTSGFILGGLGGAFFAFYL 145
>PSAL_SYNEN (P25902) Photosystem I reaction center subunit XI (PSI-L) (PSI| subunit V) Length = 148 Score = 91.3 bits (225), Expect = 1e-18 Identities = 46/117 (39%), Positives = 65/117 (55%) Frame = +2 Query: 2 AYRTAVSPLLRGIEVGLAHGYLLVGPFALTGPLRNTPVHGQAGTLGAIGLVSILSVCLTM 181 AYR +SP+L G+EVG+AHGY L+GP+ GPLR++ V G + I L+ + + CL Sbjct: 36 AYRQGLSPILPGLEVGMAHGYFLIGPWVKLGPLRDSDVANLGGLISGIALILVATACLAA 95 Query: 182 YGVASFNEGEPSTAPVLTLTGRKKEADKLQTAEGWSQXXXXXXXXXVSGAVWAYFLL 352 YG+ SF +G S +D L+T+EGWSQ + A A+FLL Sbjct: 96 YGLVSFQKGGSS-------------SDPLKTSEGWSQFTAGFFVGAMGSAFVAFFLL 139
>PSAL_ODOSI (P49486) Photosystem I reaction center subunit XI (PSI-L) (PSI| subunit V) Length = 150 Score = 89.0 bits (219), Expect = 5e-18 Identities = 44/97 (45%), Positives = 64/97 (65%) Frame = +2 Query: 2 AYRTAVSPLLRGIEVGLAHGYLLVGPFALTGPLRNTPVHGQAGTLGAIGLVSILSVCLTM 181 AYR ++PLLRG+E+GLAHGY L+GPF GPLRN+ + +G L IGL+ IL++ LT+ Sbjct: 36 AYRFGLTPLLRGLEIGLAHGYFLMGPFVKLGPLRNSDIALFSGFLSTIGLILILTLGLTI 95 Query: 182 YGVASFNEGEPSTAPVLTLTGRKKEADKLQTAEGWSQ 292 YGVA+F +G+ + + ++ LQT + W Q Sbjct: 96 YGVAAFGQGQTT-----------ENSNDLQTKKAWDQ 121
>PSAL_ANASP (P58577) Photosystem I reaction center subunit XI (PSI-L) (PSI| subunit V) Length = 172 Score = 88.6 bits (218), Expect = 6e-18 Identities = 48/116 (41%), Positives = 64/116 (55%) Frame = +2 Query: 2 AYRTAVSPLLRGIEVGLAHGYLLVGPFALTGPLRNTPVHGQAGTLGAIGLVSILSVCLTM 181 AYR ++P RG+EVG+AHGY L GPFA GPLR+ AG LGAIGLV + ++ L++ Sbjct: 52 AYRPGLTPFRRGLEVGMAHGYFLFGPFAKLGPLRDAANANLAGLLGAIGLVVLFTLALSL 111 Query: 182 YGVASFNEGEPSTAPVLTLTGRKKEADKLQTAEGWSQXXXXXXXXXVSGAVWAYFL 349 Y N P+ +T+ D Q+ EGW+ + GAV AYFL Sbjct: 112 YA----NSNPPTALASVTV---PNPPDAFQSKEGWNNFASAFLIGGIGGAVVAYFL 160
>PSAL_ISOGA (Q5ENP6) Photosystem I reaction center subunit XI (PSI-L) (PSI| subunit V) Length = 147 Score = 88.2 bits (217), Expect = 8e-18 Identities = 44/116 (37%), Positives = 65/116 (56%) Frame = +2 Query: 5 YRTAVSPLLRGIEVGLAHGYLLVGPFALTGPLRNTPVHGQAGTLGAIGLVSILSVCLTMY 184 YR ++PLLRG+E+G+AHGY L+GPF + GPLRN+P G A GL+ IL++ LT+Y Sbjct: 39 YRKGLTPLLRGLEIGMAHGYFLIGPFYILGPLRNSPNALLVGLFSAFGLIIILTLALTIY 98 Query: 185 GVASFNEGEPSTAPVLTLTGRKKEADKLQTAEGWSQXXXXXXXXXVSGAVWAYFLL 352 G+ASF + + L++++GW + GA AY +L Sbjct: 99 GLASFQD--------------NGVGENLESSKGWRNFTSGFTIGALGGASVAYLVL 140
>PSAL_ANAVT (P31092) Photosystem I reaction center subunit XI (PSI-L) (PSI| subunit V) Length = 172 Score = 87.8 bits (216), Expect = 1e-17 Identities = 48/116 (41%), Positives = 63/116 (54%) Frame = +2 Query: 2 AYRTAVSPLLRGIEVGLAHGYLLVGPFALTGPLRNTPVHGQAGTLGAIGLVSILSVCLTM 181 AYR ++P RG+EVG+AHGY L GPFA GPLR+ AG LGAIGLV + ++ L++ Sbjct: 52 AYRPGLTPFRRGLEVGMAHGYFLFGPFAKLGPLRDAANANLAGLLGAIGLVVLFTLSLSL 111 Query: 182 YGVASFNEGEPSTAPVLTLTGRKKEADKLQTAEGWSQXXXXXXXXXVSGAVWAYFL 349 Y N P +T+ D Q+ EGW+ + GAV AYFL Sbjct: 112 YA----NSNPPKALASVTV---PNPPDAFQSKEGWNNFASAFLIGGIGGAVVAYFL 160
>PSAL_MASLA (O31126) Photosystem I reaction center subunit XI (PSI-L) (PSI| subunit V) Length = 173 Score = 85.5 bits (210), Expect = 5e-17 Identities = 50/122 (40%), Positives = 65/122 (53%) Frame = +2 Query: 2 AYRTAVSPLLRGIEVGLAHGYLLVGPFALTGPLRNTPVHGQAGTLGAIGLVSILSVCLTM 181 AYR ++ RG+EVG+AHGY + GPFA GPLRNT AG L A+GL+ IL+ LT+ Sbjct: 52 AYRPGITTFRRGLEVGMAHGYWIFGPFAKLGPLRNTVNANLAGLLSALGLIIILTGALTL 111 Query: 182 YGVASFNEGEPSTAPVLTLTGRKKEADKLQTAEGWSQXXXXXXXXXVSGAVWAYFLLYVL 361 Y +P T EA Q++EGW+ + GAV AYFL L Sbjct: 112 YA-----NSKPPKPVKSVATPNPPEA--FQSSEGWNNFASAFLIGGIGGAVVAYFLTSNL 164 Query: 362 DL 367 +L Sbjct: 165 EL 166
>PSAL_PROMA (O87787) Photosystem I reaction center subunit XI (PSI-L) (PSI| subunit V) Length = 199 Score = 79.0 bits (193), Expect = 5e-15 Identities = 52/124 (41%), Positives = 62/124 (50%), Gaps = 3/124 (2%) Frame = +2 Query: 5 YRTAVSPLLRGIEVGLAHGYLLVGPFALTGPLRNTPVHGQAGTLGAIGLVSILSVCLTMY 184 YR +SP RG+EVG A GYLL GP+A+TGPLRNT AG LG IG V IL+ L +Y Sbjct: 70 YRGGLSPNFRGLEVGAAFGYLLYGPYAMTGPLRNTDYALTAGLLGTIGAVHILTALLVLY 129 Query: 185 GVASFNEGEPSTAPVL---TLTGRKKEADKLQTAEGWSQXXXXXXXXXVSGAVWAYFLLY 355 P AP + T AD L T GW+ GAV+A+ L Sbjct: 130 NA-------PGKAPNIQPSDCTINNPPAD-LFTRSGWADFTSGFWLGGCGGAVFAWLLCG 181 Query: 356 VLDL 367 L L Sbjct: 182 TLHL 185
>PSAL_GLOVI (Q7NIE7) Photosystem I reaction center subunit XI (PSI-L) (PSI| subunit V) Length = 147 Score = 70.1 bits (170), Expect = 2e-12 Identities = 44/120 (36%), Positives = 63/120 (52%) Frame = +2 Query: 8 RTAVSPLLRGIEVGLAHGYLLVGPFALTGPLRNTPVHGQAGTLGAIGLVSILSVCLTMYG 187 R + RG+E+G+AHGY L+GPFAL GPLRNT + AG + IGL+ I ++ L+ G Sbjct: 38 RVGMDEFTRGLEIGMAHGYWLIGPFALLGPLRNTELGLVAGLVSTIGLLLISTIGLS--G 95 Query: 188 VASFNEGEPSTAPVLTLTGRKKEADKLQTAEGWSQXXXXXXXXXVSGAVWAYFLLYVLDL 367 AS E P+ E D+ +GWS+ V GA++A+ +L L Sbjct: 96 YASLVEDVPT------------EFDR----KGWSRLAGGFLVGGVGGAIFAFAILQFFPL 139
>ETS3_DROME (P29774) DNA-binding protein D-ETS-3| Length = 490 Score = 29.6 bits (65), Expect = 3.4 Identities = 20/65 (30%), Positives = 31/65 (47%) Frame = +2 Query: 86 LTGPLRNTPVHGQAGTLGAIGLVSILSVCLTMYGVASFNEGEPSTAPVLTLTGRKKEADK 265 LT L PV G +GL +V + + GV ++N STA VL+ +G + + Sbjct: 86 LTDSLDTLPVQSGNGGGNCLGLPHNPNVGVGVAGVLNYNAVSSSTAGVLSSSGNGVQRHR 145 Query: 266 LQTAE 280 L T + Sbjct: 146 LDTLQ 150
>LRIG1_HUMAN (Q96JA1) Leucine-rich repeats and immunoglobulin-like domains| protein 1 precursor (LIG-1) Length = 1093 Score = 28.9 bits (63), Expect = 5.8 Identities = 18/47 (38%), Positives = 21/47 (44%), Gaps = 1/47 (2%) Frame = -1 Query: 246 RPVRVSTGAVDGSPSLKEATPYMVR-QTLRMETSPMAPSVPACPCTG 109 RPVR GA SP L +VR + + P AP AC C G Sbjct: 3 RPVRGGLGAPRRSPCLLLLWLVLVRLEPVTAAAGPRAPCAAACTCAG 49
>CBP_HUMAN (Q92793) CREB-binding protein (EC 2.3.1.48)| Length = 2442 Score = 28.9 bits (63), Expect = 5.8 Identities = 22/77 (28%), Positives = 36/77 (46%), Gaps = 3/77 (3%) Frame = -1 Query: 228 TGAVDGSPSLKEATPYMVRQTLRMETSPMAPSVPACPCTGVLRSGP---VSAKGPTRR*P 58 T A G+P+ + +TP + + + SP++ S P V R+ P VS PT + P Sbjct: 1886 TSAPPGTPTQQPSTPQTPQPPAQPQPSPVSMSPAGFP--SVARTQPPTTVSTGKPTSQVP 1943 Query: 57 WARPTSMPRRSGLTAVR 7 P + P + + A R Sbjct: 1944 APPPPAQPPPAAVEAAR 1960
>P2RX2_RAT (P49653) P2X purinoceptor 2 (ATP receptor) (P2X2) (Purinergic| receptor) Length = 472 Score = 28.5 bits (62), Expect = 7.6 Identities = 14/29 (48%), Positives = 16/29 (55%) Frame = +2 Query: 113 VHGQAGTLGAIGLVSILSVCLTMYGVASF 199 VHGQAG I + L+ LT GV SF Sbjct: 318 VHGQAGKFSLIPTIINLATALTSIGVGSF 346
>P2RX2_CAVPO (O70397) P2X purinoceptor 2 (ATP receptor) (P2X2) (Purinergic| receptor) Length = 474 Score = 28.5 bits (62), Expect = 7.6 Identities = 14/29 (48%), Positives = 16/29 (55%) Frame = +2 Query: 113 VHGQAGTLGAIGLVSILSVCLTMYGVASF 199 VHGQAG I + L+ LT GV SF Sbjct: 325 VHGQAGKFSLIPTIINLATALTSIGVGSF 353
>TENX_HUMAN (P22105) Tenascin-X precursor (TN-X) (Hexabrachion-like protein)| Length = 4289 Score = 28.5 bits (62), Expect = 7.6 Identities = 19/66 (28%), Positives = 29/66 (43%) Frame = +2 Query: 92 GPLRNTPVHGQAGTLGAIGLVSILSVCLTMYGVASFNEGEPSTAPVLTLTGRKKEADKLQ 271 G ++ V GQA T GL+ +T+ V F E EP T + T+ + L Sbjct: 3841 GEPQSVQVDGQARTQKLQGLIPGARYEVTVVSVRGFEESEPLTGFLTTVPDGPTQLRALN 3900 Query: 272 TAEGWS 289 EG++ Sbjct: 3901 LTEGFA 3906
>YAMP_RHOCA (P14172) Hypothetical 28.2 kDa protein in ampR 5'region| Length = 260 Score = 28.5 bits (62), Expect = 7.6 Identities = 19/57 (33%), Positives = 24/57 (42%), Gaps = 7/57 (12%) Frame = -1 Query: 174 RQTLRMETSPMAPSVPAC-------PCTGVLRSGPVSAKGPTRR*PWARPTSMPRRS 25 + T+RM + +A P PC L S VS +G PW RP S R S Sbjct: 164 KYTVRMTSCDVASQAPLAQILKGMVPCGSPLPSCRVSRQGSLSACPWPRPPSPKRLS 220
>P2RX2_HUMAN (Q9UBL9) P2X purinoceptor 2 (ATP receptor) (P2X2) (Purinergic| receptor) Length = 471 Score = 28.5 bits (62), Expect = 7.6 Identities = 14/29 (48%), Positives = 16/29 (55%) Frame = +2 Query: 113 VHGQAGTLGAIGLVSILSVCLTMYGVASF 199 VHGQAG I + L+ LT GV SF Sbjct: 329 VHGQAGKFSLIPTIINLATALTSVGVGSF 357
>M3K12_HUMAN (Q12852) Mitogen-activated protein kinase kinase kinase 12 (EC| 2.7.11.25) (Mixed lineage kinase) (Leucine-zipper protein kinase) (ZPK) (Dual leucine zipper bearing kinase) (DLK) (MAPK-upstream kinase) (MUK) Length = 859 Score = 28.1 bits (61), Expect = 9.9 Identities = 17/33 (51%), Positives = 17/33 (51%) Frame = -3 Query: 304 ASGELRPPFGGLELVGLLLASGEGEHRRGGRLA 206 A GE PP G E VGLL EG RGG A Sbjct: 661 AKGEPPPPVGPGEGVGLLGTGREGTSGRGGSRA 693
>HSF3_ARATH (O81821) Heat shock factor protein 3 (HSF 3) (Heat shock| transcription factor 3) (HSTF 3) Length = 481 Score = 28.1 bits (61), Expect = 9.9 Identities = 17/41 (41%), Positives = 21/41 (51%) Frame = -1 Query: 207 PSLKEATPYMVRQTLRMETSPMAPSVPACPCTGVLRSGPVS 85 PS+ EA M+RQ L TSP SV P + +L P S Sbjct: 259 PSINEAAQNMLRQFLNTSTSPRYESVSNNPDSFLLGDVPSS 299
>M3K12_MOUSE (Q60700) Mitogen-activated protein kinase kinase kinase 12 (EC| 2.7.11.25) (Mixed lineage kinase) (Leucine-zipper protein kinase) (ZPK) (Dual leucine zipper bearing kinase) (DLK) (MAPK-upstream kinase) (MUK) Length = 888 Score = 28.1 bits (61), Expect = 9.9 Identities = 17/33 (51%), Positives = 17/33 (51%) Frame = -3 Query: 304 ASGELRPPFGGLELVGLLLASGEGEHRRGGRLA 206 A GE PP G E VGLL EG RGG A Sbjct: 694 AKGEPPPPVGPGEGVGLLGTGREGTAGRGGNRA 726
>HRDB_STRCO (P18183) RNA polymerase principal sigma factor hrdB| Length = 511 Score = 28.1 bits (61), Expect = 9.9 Identities = 23/81 (28%), Positives = 34/81 (41%), Gaps = 5/81 (6%) Frame = -1 Query: 267 SLSASFLRPVRVSTGAVDGSPSLKEATPYMVRQ--TLRMETSPMAPSVPACPCTGVLRSG 94 +L S P R SP+ + AT + + T R T+P AP+ PA V Sbjct: 68 TLMVSAAEPKRTRKSVAAKSPAKRTATKAVAAKPVTSRKATAPAAPAAPATEPAAVEEEA 127 Query: 93 P---VSAKGPTRR*PWARPTS 40 P +AK T + A+ T+ Sbjct: 128 PAKKAAAKKTTAKKATAKKTT 148 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 40,749,186 Number of Sequences: 219361 Number of extensions: 694268 Number of successful extensions: 2370 Number of sequences better than 10.0: 34 Number of HSP's better than 10.0 without gapping: 2249 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2350 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2570413340 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
