>CAP10_ARATH (Q9LHS0) Putative clathrin assembly protein At5g35200|
          Length = 544

 Score =  168 bits (425), Expect = 1e-41
 Identities = 96/204 (47%), Positives = 122/204 (59%), Gaps = 13/204 (6%)
 Frame = +2

Query: 56  CQPQGASSYNVIIQHALSMVALESVKIYTAISDGTINLVDKFFEMQRNDAVRALDIYKRA 235
           CQP+GA+  N IIQ ALSMV  ES KIY A++DG  NLVDKFF+MQRNDAV+ALD+Y+RA
Sbjct: 198 CQPEGAAVQNHIIQLALSMVISESTKIYQALTDGIDNLVDKFFDMQRNDAVKALDMYRRA 257

Query: 236 TNQSERLSEFYEVCKTIHVARGEKFLKIEQPPASFMQTMEEYVRDAP------------- 376
             Q+ RLSEF+EVCK+++V RGE+F+KIEQPP SF+Q MEEYV++AP             
Sbjct: 258 VKQAGRLSEFFEVCKSVNVGRGERFIKIEQPPTSFLQAMEEYVKEAPLAAGVKKEQVVEK 317

Query: 377 AMKDKAILAIEYNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTDLLG 556
               K ILAIEY                                            DLL 
Sbjct: 318 LTAPKEILAIEYE---------------IPPKVVEEKPASPEPVKAEAEKPVEKQPDLLS 362

Query: 557 LNETHPAVAEIDERNALALAIVPI 628
           +++  P V+E++E+NALALAIVP+
Sbjct: 363 MDDPAPMVSELEEKNALALAIVPV 386

>CAP9_ARATH (P94017) Putative clathrin assembly protein At1g14910|
          Length = 692

 Score =  136 bits (342), Expect = 6e-32
 Identities = 81/204 (39%), Positives = 110/204 (53%), Gaps = 12/204 (5%)
 Frame = +2

Query: 56  CQPQGASSYNVIIQHALSMVALESVKIYTAISDGTINLVDKFFEMQRNDAVRALDIYKRA 235
           C+P+GA+ +N IIQ+ALS+V  ES K+Y AI++G INLV+KFFEM R++A++AL+IYKRA
Sbjct: 205 CKPEGAAKHNHIIQYALSLVLKESFKVYCAINEGIINLVEKFFEMPRHEAIKALEIYKRA 264

Query: 236 TNQSERLSEFYEVCKTIHVARGEKFLKIEQPPASFMQTMEEYVRDAPAMKD--KAILAIE 409
             Q+  LS FYEVCK + +AR  +F  + +PP SF+ TMEEY+RDAP M D     L + 
Sbjct: 265 GLQAGNLSAFYEVCKGLELARNFQFPVLREPPQSFLTTMEEYMRDAPQMVDVTSGPLLLT 324

Query: 410 YNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----------XXXTDLLGL 559
           Y                                                      DLLGL
Sbjct: 325 YTPDDGLTSEDVGPSHEEHETSSPSDSAVVPSEETQLSSQSPPSVETPQNFIDTDDLLGL 384

Query: 560 NETHPAVAEIDERNALALAIVPID 631
           ++  P    I ++NALALA+V  D
Sbjct: 385 HDDTPDPLAILDQNALALALVSND 408

>CAP8_ARATH (Q8LBH2) Putative clathrin assembly protein At2g01600|
          Length = 571

 Score =  135 bits (339), Expect = 1e-31
 Identities = 76/205 (37%), Positives = 111/205 (54%), Gaps = 10/205 (4%)
 Frame = +2

Query: 56  CQPQGASSYNVIIQHALSMVALESVKIYTAISDGTINLVDKFFEMQRNDAVRALDIYKRA 235
           C+P+GA+++N +IQ+AL++V  ES K+Y AI+DG INL+DKFFEM +++A+ +L+IYKRA
Sbjct: 205 CRPEGAANHNHVIQYALALVLKESFKVYCAINDGIINLIDKFFEMAKHEAITSLEIYKRA 264

Query: 236 TNQSERLSEFYEVCKTIHVARGEKFLKIEQPPASFMQTMEEYVRDAPAMKDKAI--LAIE 409
             Q+  LS+FYE CK + +AR  +F  + +PP SF+ TMEEY+++AP + D     L + 
Sbjct: 265 GQQARSLSDFYEACKGLELARNFQFPVLREPPQSFLTTMEEYIKEAPRVVDVPAEPLLLT 324

Query: 410 YNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--------XXXXXXXXXXTDLLGLNE 565
           Y                                                    DL GLN 
Sbjct: 325 YRPDDGLTTEDTEPSHEEREMLPSDDVVVVSEETEPSPPPPPSANAQNFIDTDDLWGLNT 384

Query: 566 THPAVAEIDERNALALAIVPIDDVP 640
             P  + I+++NALALAIV  D  P
Sbjct: 385 GAPDTSVIEDQNALALAIVSTDADP 409

>CAP7_ARATH (Q9LVD8) Putative clathrin assembly protein At5g57200|
          Length = 591

 Score =  134 bits (337), Expect = 2e-31
 Identities = 63/107 (58%), Positives = 84/107 (78%)
 Frame = +2

Query: 56  CQPQGASSYNVIIQHALSMVALESVKIYTAISDGTINLVDKFFEMQRNDAVRALDIYKRA 235
           CQP+GA+  N +IQ+AL++V  ES KIY AI+DG INLVD FFEM R+DAV+AL+IYKRA
Sbjct: 204 CQPEGAAYSNYLIQYALALVLKESFKIYCAINDGIINLVDMFFEMSRHDAVKALNIYKRA 263

Query: 236 TNQSERLSEFYEVCKTIHVARGEKFLKIEQPPASFMQTMEEYVRDAP 376
             Q+E L+EFY+ CK + +AR  +F  + QPP SF+ TMEEY+++AP
Sbjct: 264 GQQAENLAEFYDYCKGLELARNFQFPTLRQPPPSFLATMEEYIKEAP 310



 Score = 36.2 bits (82), Expect = 0.084
 Identities = 16/27 (59%), Positives = 21/27 (77%)
 Frame = +2

Query: 545 DLLGLNETHPAVAEIDERNALALAIVP 625
           DLLGL+E +P  AEI++ NA +LAI P
Sbjct: 382 DLLGLHEINPKAAEIEQNNAFSLAIYP 408

>CAP6_ARATH (Q8VYT2) Putative clathrin assembly protein At4g25940|
          Length = 601

 Score =  132 bits (331), Expect = 1e-30
 Identities = 61/107 (57%), Positives = 84/107 (78%)
 Frame = +2

Query: 56  CQPQGASSYNVIIQHALSMVALESVKIYTAISDGTINLVDKFFEMQRNDAVRALDIYKRA 235
           CQP+G++  N +IQ+AL++V  ES KIY AI+DG INLVD FFEM R+DAV+AL+IYKRA
Sbjct: 212 CQPEGSAYSNYLIQYALALVLKESFKIYCAINDGIINLVDMFFEMSRHDAVKALNIYKRA 271

Query: 236 TNQSERLSEFYEVCKTIHVARGEKFLKIEQPPASFMQTMEEYVRDAP 376
             Q+E L++FYE CK + +AR  +F  + QPP SF+ TME+Y+++AP
Sbjct: 272 GQQAENLADFYEYCKGLELARNFQFPTLRQPPPSFLATMEDYIKEAP 318

>CAP1_ARATH (Q8S9J8) Putative clathrin assembly protein At4g32285|
          Length = 635

 Score = 75.9 bits (185), Expect = 1e-13
 Identities = 37/106 (34%), Positives = 62/106 (58%)
 Frame = +2

Query: 53  ACQPQGASSYNVIIQHALSMVALESVKIYTAISDGTINLVDKFFEMQRNDAVRALDIYKR 232
           +C+P G +  + +I  A+  V  ES ++Y  I +    L+DKFF+M+  D V+A D Y  
Sbjct: 250 SCRPTGLAKNSRMILIAMYPVVKESFRLYADICEVLAVLLDKFFDMEYTDCVKAFDAYAS 309

Query: 233 ATNQSERLSEFYEVCKTIHVARGEKFLKIEQPPASFMQTMEEYVRD 370
           A  Q + L  FY  CK   VAR  ++ ++++  +  ++T+EE+VRD
Sbjct: 310 AAKQIDELIAFYHWCKDTGVARSSEYPEVQRITSKLLETLEEFVRD 355

>CAP2_ARATH (Q8LF20) Putative clathrin assembly protein At2g25430|
          Length = 653

 Score = 74.3 bits (181), Expect = 3e-13
 Identities = 38/104 (36%), Positives = 61/104 (58%)
 Frame = +2

Query: 59  QPQGASSYNVIIQHALSMVALESVKIYTAISDGTINLVDKFFEMQRNDAVRALDIYKRAT 238
           +P G +  + +I  AL  V  ES K+Y  I +    L+DKFF+M+ +D V+A D Y  A 
Sbjct: 272 RPTGLAKNSRMILIALYPVVRESFKLYADICEVLAVLLDKFFDMEYSDCVKAFDAYASAA 331

Query: 239 NQSERLSEFYEVCKTIHVARGEKFLKIEQPPASFMQTMEEYVRD 370
            Q + L  FY  CK   VAR  ++ ++++  +  ++T+EE+VRD
Sbjct: 332 KQIDELIAFYNWCKETGVARSSEYPEVQRITSKLLETLEEFVRD 375

>CAP4_ARATH (Q9SA65) Putative clathrin assembly protein At1g03050|
          Length = 599

 Score = 71.6 bits (174), Expect = 2e-12
 Identities = 34/111 (30%), Positives = 65/111 (58%)
 Frame = +2

Query: 53  ACQPQGASSYNVIIQHALSMVALESVKIYTAISDGTINLVDKFFEMQRNDAVRALDIYKR 232
           AC+P G +  N ++  AL  +  ES +IY  +++    L+++F E+   D+++  DI+ R
Sbjct: 219 ACRPTGNARNNRVVIVALYPIVKESFQIYYDVTEIMGILIERFMELDIPDSIKVYDIFCR 278

Query: 233 ATNQSERLSEFYEVCKTIHVARGEKFLKIEQPPASFMQTMEEYVRDAPAMK 385
            + Q E L +FY  CK + +AR  ++ +IE+     +  M+E++RD  A++
Sbjct: 279 VSKQFEELDQFYSWCKNMGIARSSEYPEIEKITQKKLDLMDEFIRDKSALE 329

>AP180_HUMAN (O60641) Clathrin coat assembly protein AP180 (Clathrin|
           coat-associated protein AP180) (91 kDa
           synaptosomal-associated protein)
          Length = 907

 Score = 69.3 bits (168), Expect = 9e-12
 Identities = 33/101 (32%), Positives = 61/101 (60%)
 Frame = +2

Query: 83  NVIIQHALSMVALESVKIYTAISDGTINLVDKFFEMQRNDAVRALDIYKRATNQSERLSE 262
           N +I  A  ++  + +K++   +DG INL++KFFEM++     AL+IYKR   +  R+SE
Sbjct: 190 NGVINAAFMLLFKDLIKLFACYNDGVINLLEKFFEMKKGQCKDALEIYKRFLTRMTRVSE 249

Query: 263 FYEVCKTIHVARGEKFLKIEQPPASFMQTMEEYVRDAPAMK 385
           F +V + + + +G+    + Q P+S M+T+E+++      K
Sbjct: 250 FLKVAEQVGIDKGD-IPDLTQAPSSLMETLEQHLNTLEGKK 289

>AP180_MOUSE (Q61548) Clathrin coat assembly protein AP180 (Clathrin|
           coat-associated protein AP180) (91 kDa
           synaptosomal-associated protein) (Phosphoprotein F1-20)
          Length = 901

 Score = 69.3 bits (168), Expect = 9e-12
 Identities = 33/101 (32%), Positives = 61/101 (60%)
 Frame = +2

Query: 83  NVIIQHALSMVALESVKIYTAISDGTINLVDKFFEMQRNDAVRALDIYKRATNQSERLSE 262
           N +I  A  ++  + +K++   +DG INL++KFFEM++     AL+IYKR   +  R+SE
Sbjct: 190 NGVINAAFMLLFKDLIKLFACYNDGVINLLEKFFEMKKGQCKDALEIYKRFLTRMTRVSE 249

Query: 263 FYEVCKTIHVARGEKFLKIEQPPASFMQTMEEYVRDAPAMK 385
           F +V + + + +G+    + Q P+S M+T+E+++      K
Sbjct: 250 FLKVAEQVGIDKGD-IPDLTQAPSSLMETLEQHLNTLEGKK 289

>AP180_RAT (Q05140) Clathrin coat assembly protein AP180 (Clathrin|
           coat-associated protein AP180) (91 kDa
           synaptosomal-associated protein)
          Length = 915

 Score = 68.6 bits (166), Expect = 2e-11
 Identities = 33/101 (32%), Positives = 60/101 (59%)
 Frame = +2

Query: 83  NVIIQHALSMVALESVKIYTAISDGTINLVDKFFEMQRNDAVRALDIYKRATNQSERLSE 262
           N +I  A  ++  + +K++   +DG INL++KFFEM++     AL+IYKR   +  R+SE
Sbjct: 190 NGVINAAFMLLFKDLIKLFACYNDGVINLLEKFFEMKKGQCKDALEIYKRFLTRMTRVSE 249

Query: 263 FYEVCKTIHVARGEKFLKIEQPPASFMQTMEEYVRDAPAMK 385
           F +V   + + +G+    + Q P+S M+T+E+++      K
Sbjct: 250 FLKVADEVGIDKGD-IPDLTQAPSSLMETLEQHLNTLEGKK 289

>CAP5_ARATH (Q9ZVN6) Putative clathrin assembly protein At1g05020|
          Length = 653

 Score = 68.2 bits (165), Expect = 2e-11
 Identities = 33/106 (31%), Positives = 60/106 (56%)
 Frame = +2

Query: 53  ACQPQGASSYNVIIQHALSMVALESVKIYTAISDGTINLVDKFFEMQRNDAVRALDIYKR 232
           A +P G +  N +++ +L  V  ES  +Y  ISDG   L+D FF +Q    + A     R
Sbjct: 223 ATRPTGDAKANRLVKMSLYAVMQESFDLYRDISDGLALLLDSFFHLQYQSCINAFQACVR 282

Query: 233 ATNQSERLSEFYEVCKTIHVARGEKFLKIEQPPASFMQTMEEYVRD 370
           A+ Q E L+ FY++ K+I + R  ++  I++     ++T++E+++D
Sbjct: 283 ASKQFEELNAFYDLSKSIGIGRTSEYPSIQKISLELLETLQEFLKD 328

>PICA_RAT (O55012) Phosphatidylinositol-binding clathrin assembly protein|
           (Clathrin assembly lymphoid myeloid leukemia protein)
           (rCALM)
          Length = 640

 Score = 67.4 bits (163), Expect = 3e-11
 Identities = 30/103 (29%), Positives = 62/103 (60%)
 Frame = +2

Query: 83  NVIIQHALSMVALESVKIYTAISDGTINLVDKFFEMQRNDAVRALDIYKRATNQSERLSE 262
           N +I  A  ++  ++++++ A ++G INL++K+F+M++N     LDIYK+   +  R+SE
Sbjct: 190 NGVINAAFMLLFKDAIRLFAAYNEGIINLLEKYFDMKKNQCKEGLDIYKKFLTRMTRISE 249

Query: 263 FYEVCKTIHVARGEKFLKIEQPPASFMQTMEEYVRDAPAMKDK 391
           F +V + + + RG+    + Q P+S +  +E+++      K K
Sbjct: 250 FLKVAEQVGIDRGD-IPDLSQAPSSLLDALEQHLASLEGKKIK 291

>PICA_MOUSE (Q7M6Y3) Phosphatidylinositol-binding clathrin assembly protein|
           (Clathrin assembly lymphoid myeloid leukemia) (CALM)
          Length = 660

 Score = 67.4 bits (163), Expect = 3e-11
 Identities = 30/103 (29%), Positives = 62/103 (60%)
 Frame = +2

Query: 83  NVIIQHALSMVALESVKIYTAISDGTINLVDKFFEMQRNDAVRALDIYKRATNQSERLSE 262
           N +I  A  ++  ++++++ A ++G INL++K+F+M++N     LDIYK+   +  R+SE
Sbjct: 190 NGVINAAFMLLFKDAIRLFAAYNEGIINLLEKYFDMKKNQCKEGLDIYKKFLTRMTRISE 249

Query: 263 FYEVCKTIHVARGEKFLKIEQPPASFMQTMEEYVRDAPAMKDK 391
           F +V + + + RG+    + Q P+S +  +E+++      K K
Sbjct: 250 FLKVAEQVGIDRGD-IPDLSQAPSSLLDALEQHLASLEGKKIK 291

>PICAL_HUMAN (Q13492) Phosphatidylinositol-binding clathrin assembly protein|
           (Clathrin assembly lymphoid myeloid leukemia protein)
          Length = 652

 Score = 66.6 bits (161), Expect = 6e-11
 Identities = 30/103 (29%), Positives = 61/103 (59%)
 Frame = +2

Query: 83  NVIIQHALSMVALESVKIYTAISDGTINLVDKFFEMQRNDAVRALDIYKRATNQSERLSE 262
           N +I  A  ++  ++++++ A  +G INL++K+F+M++N     LDIYK+   +  R+SE
Sbjct: 190 NGVINAAFMLLFKDAIRLFAAYHEGIINLLEKYFDMKKNQCKEGLDIYKKFLTRMTRISE 249

Query: 263 FYEVCKTIHVARGEKFLKIEQPPASFMQTMEEYVRDAPAMKDK 391
           F +V + + + RG+    + Q P+S +  +E+++      K K
Sbjct: 250 FLKVAEQVGIDRGD-IPDLSQAPSSLLDALEQHLASLEGKKIK 291

>CAP3_ARATH (Q8GX47) Putative clathrin assembly protein At4g02650|
          Length = 611

 Score = 66.6 bits (161), Expect = 6e-11
 Identities = 31/110 (28%), Positives = 64/110 (58%)
 Frame = +2

Query: 53  ACQPQGASSYNVIIQHALSMVALESVKIYTAISDGTINLVDKFFEMQRNDAVRALDIYKR 232
           AC+P G +  N ++  A+  +  ES ++Y  I++    L+++F E+  +D+++  +I+ R
Sbjct: 224 ACRPTGNAKNNRVVIVAMYPIVKESFQLYYNITEIMGVLIERFMELDIHDSIKVYEIFCR 283

Query: 233 ATNQSERLSEFYEVCKTIHVARGEKFLKIEQPPASFMQTMEEYVRDAPAM 382
            + Q + L  FY  CK + VAR  ++ ++E+     +  M+E++RD  A+
Sbjct: 284 VSKQFDELDPFYGWCKNMAVARSSEYPELEKITQKKLDLMDEFIRDKSAL 333

>PICA_DROME (Q9VI75) Phosphatidylinositol-binding clathrin assembly protein LAP|
           (Like-AP180)
          Length = 468

 Score = 58.5 bits (140), Expect = 2e-08
 Identities = 29/113 (25%), Positives = 63/113 (55%)
 Frame = +2

Query: 56  CQPQGASSYNVIIQHALSMVALESVKIYTAISDGTINLVDKFFEMQRNDAVRALDIYKRA 235
           CQ    S  N +I  +  ++  + ++++   +DG INL++K+F+M +  A  ALD+YK+ 
Sbjct: 197 CQSNDLS--NGVINMSFMLLFRDLIRLFACYNDGIINLLEKYFDMNKKHARDALDLYKKF 254

Query: 236 TNQSERLSEFYEVCKTIHVARGEKFLKIEQPPASFMQTMEEYVRDAPAMKDKA 394
             + +R+ EF +V + + + +G+    + + P+S +  +E+++      K  A
Sbjct: 255 LVRMDRVGEFLKVAENVGIDKGD-IPDLTKAPSSLLDALEQHLATLEGRKVSA 306

>PICA_CAEEL (Q9XZI6) Phosphatidylinositol-binding clathrin assembly protein|
           unc-11 (AP180-like adaptor protein) (Uncoordinated
           protein 11)
          Length = 586

 Score = 55.1 bits (131), Expect = 2e-07
 Identities = 24/94 (25%), Positives = 56/94 (59%)
 Frame = +2

Query: 83  NVIIQHALSMVALESVKIYTAISDGTINLVDKFFEMQRNDAVRALDIYKRATNQSERLSE 262
           N +I  +  ++  + ++++   +DG IN+++K+F+M +     ALD YK    + ++++E
Sbjct: 207 NGVINCSFILLFRDLIRLFACYNDGIINVLEKYFDMNKKQCRDALDTYKSFLTRLDKVAE 266

Query: 263 FYEVCKTIHVARGEKFLKIEQPPASFMQTMEEYV 364
           F  V +++ + RGE    + + PAS ++ +E ++
Sbjct: 267 FLRVAESVGIDRGE-IPDLTRAPASLLEALEAHL 299

>YG54_YEAST (P53309) Hypothetical 64.3 kDa protein in PFK1-TDS4 intergenic|
           region
          Length = 568

 Score = 49.3 bits (116), Expect = 1e-05
 Identities = 24/96 (25%), Positives = 53/96 (55%)
 Frame = +2

Query: 83  NVIIQHALSMVALESVKIYTAISDGTINLVDKFFEMQRNDAVRALDIYKRATNQSERLSE 262
           N ++ +A  ++  + + +Y A+++G I L++ FFE+    A R LD+YK   + +E +  
Sbjct: 174 NHLLLYAFQLLVQDLLGLYNALNEGVITLLESFFELSIEHAKRTLDLYKDFVDMTEYVVR 233

Query: 263 FYEVCKTIHVARGEKFLKIEQPPASFMQTMEEYVRD 370
           + ++ K +    G K   I+      + ++EE++R+
Sbjct: 234 YLKIGKAV----GLKIPVIKHITTKLINSLEEHLRE 265

>YHW1_YEAST (P38856) Hypothetical 71.7 kDa protein in REC104-SOL3 intergenic|
           region
          Length = 637

 Score = 45.8 bits (107), Expect = 1e-04
 Identities = 24/94 (25%), Positives = 51/94 (54%)
 Frame = +2

Query: 83  NVIIQHALSMVALESVKIYTAISDGTINLVDKFFEMQRNDAVRALDIYKRATNQSERLSE 262
           N +I     ++  + + +Y A+++G I L++ FFE+  ++A R LD+YK   + +E +  
Sbjct: 180 NELIIFGFKLLIQDLLALYNALNEGIITLLESFFELSHHNAERTLDLYKTFVDLTEHVVR 239

Query: 263 FYEVCKTIHVARGEKFLKIEQPPASFMQTMEEYV 364
           + +  KT     G K   I+      ++++EE++
Sbjct: 240 YLKSGKT----AGLKIPVIKHITTKLVRSLEEHL 269

>CAP11_ARATH (Q9C502) Putative clathrin assembly protein At1g33340|
          Length = 374

 Score = 40.0 bits (92), Expect = 0.006
 Identities = 21/75 (28%), Positives = 36/75 (48%)
 Frame = +2

Query: 56  CQPQGASSYNVIIQHALSMVALESVKIYTAISDGTINLVDKFFEMQRNDAVRALDIYKRA 235
           C P  A   + ++Q A   +  ES ++Y   SDG   LV   F++ R     A  + ++A
Sbjct: 201 CSPVDAWPIDNLVQAATGNILKESFQVYMTYSDGMTALVSMLFDLSRPARDLACGMLRKA 260

Query: 236 TNQSERLSEFYEVCK 280
           + Q + L   Y+ C+
Sbjct: 261 SQQIQDLRILYDKCR 275

>ANC1_CAEEL (Q9N4M4) Nuclear anchorage protein 1 (Anchorage 1 protein) (Nesprin|
            homolog)
          Length = 8545

 Score = 38.5 bits (88), Expect = 0.017
 Identities = 33/114 (28%), Positives = 56/114 (49%), Gaps = 1/114 (0%)
 Frame = +2

Query: 59   QPQGASSYNVIIQHALSMVALESVKIYTAISDGTINLVDKFFEMQRNDAVRALDIYKRAT 238
            Q   A S N   +HAL+++A ES K  + ISD  +  +D   E Q N  V  L+  +   
Sbjct: 2822 QKMPADSLN---EHALNLLATESDKFGSEISDKIMQEIDVLREKQNNHEVARLNA-ESVL 2877

Query: 239  NQSERLSEFYEVCKTIHVARGEKFLK-IEQPPASFMQTMEEYVRDAPAMKDKAI 397
             Q +++SE  E   ++   R   FL+ I+  PA F+  +   + +   + D+A+
Sbjct: 2878 QQLDKISE--EPHLSLTEERLAPFLQNIDTVPACFVDKIRNKINEVQKLHDEAV 2929

>Y12F_BPT4 (P32275) Hypothetical 32.4 kDa protein in Gp30-rIII intergenic|
           region (URF X)
          Length = 278

 Score = 32.3 bits (72), Expect = 1.2
 Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 4/73 (5%)
 Frame = +2

Query: 62  PQGASSYNVIIQHALSMVALESV----KIYTAISDGTINLVDKFFEMQRNDAVRALDIYK 229
           P  A  YN+ ++H L M+  E      K++    +  + L++K+    R+D +R L  YK
Sbjct: 21  PYFAQKYNLPLEHILKMIQDEKFISPGKLFNCDEELGVKLIEKY---NRSDFIRYLSPYK 77

Query: 230 RATNQSERLSEFY 268
            A     +L E Y
Sbjct: 78  DALCVINKLKEDY 90

>CDC63_HALSA (Q9HMS3) Cell division control protein 6 homolog 3 (CDC6 homolog 3)|
          Length = 518

 Score = 32.3 bits (72), Expect = 1.2
 Identities = 32/115 (27%), Positives = 51/115 (44%)
 Frame = +2

Query: 62  PQGASSYNVIIQHALSMVALESVKIYTAISDGTINLVDKFFEMQRNDAVRALDIYKRATN 241
           P  A+    I+QH  S VA ++     A+SD  + L   F   +  DA RALD+ + A  
Sbjct: 317 PYDANQLRDILQHR-SDVAFKA----DALSDDVLPLCAAFAAQEHGDARRALDLLRTAGE 371

Query: 242 QSERLSEFYEVCKTIHVARGEKFLKIEQPPASFMQTMEEYVRDAPAMKDKAILAI 406
            +ER  +  E     HV R +  +++++        + E VR  P      + AI
Sbjct: 372 LAER--DQAENVTEDHVRRAQDKIELDR--------VVEVVRTLPTQSKLVLYAI 416

>MIA40_KLULA (Q6CSA1) Intermembrane space import and assembly protein 40,|
           mitochondrial precursor (Mitochondrial import inner
           membrane translocase TIM40)
          Length = 406

 Score = 30.4 bits (67), Expect = 4.6
 Identities = 24/88 (27%), Positives = 37/88 (42%), Gaps = 3/88 (3%)
 Frame = +2

Query: 134 IYTAISDGTINLVDKFFEMQRNDAVRALDIYKRATNQSERLS---EFYEVCKTIHVARGE 304
           +Y+      IN V+KF  MQ N   +  D Y       E  S      E   T  V+   
Sbjct: 305 VYSEADPKGINCVEKFSTMQ-NCFRKYPDYYAEQIKDEEEASAEASKIEDKSTTPVSTAT 363

Query: 305 KFLKIEQPPASFMQTMEEYVRDAPAMKD 388
             ++++   A F   +E+YV + P +KD
Sbjct: 364 STVEVQTENAVFEPVLEKYVEENPQLKD 391


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 76,093,445
Number of Sequences: 219361
Number of extensions: 1333977
Number of successful extensions: 3362
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 3267
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3359
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 5972710590
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)