ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal23e02
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1PIP23_ORYSA (Q7XUA6) Probable aquaporin PIP2.3 (Plasma membrane ... 64 1e-10
2PIP22_ORYSA (Q6K215) Probable aquaporin PIP2.2 (Plasma membrane ... 64 1e-10
3PIP21_ORYSA (Q8H5N9) Probable aquaporin PIP2.1 (Plasma membrane ... 48 8e-06
4PIP23_ARATH (P30302) Aquaporin PIP2.3 (Plasma membrane intrinsic... 48 8e-06
5PIP22_ARATH (P43287) Aquaporin PIP2.2 (Plasma membrane intrinsic... 47 2e-05
6PIP21_ARATH (P43286) Aquaporin PIP2.1 (Plasma membrane intrinsic... 45 7e-05
7PIP24_ARATH (Q9FF53) Probable aquaporin PIP2.4 (Plasma membrane ... 45 7e-05
8PIP25_ARATH (Q9SV31) Probable aquaporin PIP2.5 (Plasma membrane ... 39 0.005
9PIP24_ORYSA (Q8GRT8) Aquaporin PIP2.4 (Plasma membrane intrinsic... 39 0.005
10PIP28_ORYSA (Q7Y1E6) Probable aquaporin PIP2.8 (Plasma membrane ... 37 0.011
11PIP26_ORYSA (Q7XLR1) Probable aquaporin PIP2.6 (Plasma membrane ... 37 0.015
12PIP25_ORYSA (Q8GRI8) Aquaporin PIP2.5 (Plasma membrane intrinsic... 35 0.043
13PIP2_PEA (P25794) Probable aquaporin PIP-type 7a (Turgor-respons... 35 0.056
14PIP27_ORYSA (Q651D5) Probable aquaporin PIP2.7 (Plasma membrane ... 35 0.056
15PIP27_ARATH (P93004) Aquaporin PIP2.7 (Plasma membrane intrinsic... 35 0.073
16PIP13_ORYSA (Q9SXF8) Aquaporin PIP 1.3 (Plasma membrane intrinsi... 34 0.12
17PIP1_ATRCA (P42767) Aquaporin PIP-type 33 0.21
18PIP1_LYCES (Q08451) Probable aquaporin PIP-type pTOM75 (Ripening... 33 0.28
19PIP14_ARATH (Q39196) Probable aquaporin PIP1.4 (Plasma membrane ... 33 0.28
20PIP12_ARATH (Q06611) Aquaporin PIP1.2 (Plasma membrane intrinsic... 32 0.36
21PIP11_ORYSA (Q6EU94) Aquaporin PIP1.1 (Plasma membrane intrinsic... 32 0.47
22PIP28_ARATH (Q9ZVX8) Probable aquaporin PIP2.8 (Plasma membrane ... 32 0.47
23PIP13_ARATH (Q08733) Aquaporin PIP1.3 (Plasma membrane intrinsic... 31 0.81
24PIP11_VICFA (P61838) Aquaporin PIP1.1 (Plasma membrane intrinsic... 31 0.81
25PIP11_ARATH (P61837) Aquaporin PIP1.1 (Plasma membrane intrinsic... 31 0.81
26PIP15_ARATH (Q8LAA6) Probable aquaporin PIP1.5 (Plasma membrane ... 31 0.81
27PIP26_ARATH (Q9ZV07) Probable aquaporin PIP2.6 (Plasma membrane ... 30 2.3
28SEM6C_HUMAN (Q9H3T2) Semaphorin-6C precursor (Semaphorin Y) (Sem... 29 4.0
29PK1L1_HUMAN (Q8TDX9) Polycystic kidney disease 1-like 1 protein ... 28 6.8
30GAG_SIVG1 (Q02843) Gag polyprotein [Contains: Core protein p17; ... 28 8.9

>PIP23_ORYSA (Q7XUA6) Probable aquaporin PIP2.3 (Plasma membrane intrinsic|
           protein 2.3) (OsPIP2.3)
          Length = 290

 Score = 63.5 bits (153), Expect = 1e-10
 Identities = 33/40 (82%), Positives = 33/40 (82%), Gaps = 2/40 (5%)
 Frame = +2

Query: 50  MAKDIEAAPP--GGEYAAKDYSDPPPAPLFDAEELTKXSL 163
           MAKDIEAA    GGEY AKDYSDPPPAPL DAEELTK SL
Sbjct: 1   MAKDIEAAAAAEGGEYMAKDYSDPPPAPLIDAEELTKWSL 40



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>PIP22_ORYSA (Q6K215) Probable aquaporin PIP2.2 (Plasma membrane intrinsic|
           protein 2.2) (OsPIP2.2)
          Length = 288

 Score = 63.5 bits (153), Expect = 1e-10
 Identities = 31/39 (79%), Positives = 34/39 (87%), Gaps = 1/39 (2%)
 Frame = +2

Query: 50  MAKDIEA-APPGGEYAAKDYSDPPPAPLFDAEELTKXSL 163
           MAKDIEA AP GGE++AKDY+DPPPAPL D EELTK SL
Sbjct: 1   MAKDIEASAPEGGEFSAKDYTDPPPAPLIDVEELTKWSL 39



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>PIP21_ORYSA (Q8H5N9) Probable aquaporin PIP2.1 (Plasma membrane intrinsic|
           protein 2a) (PIP2a) (OsPIP2.1)
          Length = 290

 Score = 47.8 bits (112), Expect = 8e-06
 Identities = 24/40 (60%), Positives = 28/40 (70%), Gaps = 2/40 (5%)
 Frame = +2

Query: 50  MAKD--IEAAPPGGEYAAKDYSDPPPAPLFDAEELTKXSL 163
           M KD  +E+    GE+AAKDY+DPPPAPL DA EL   SL
Sbjct: 1   MGKDEVMESGGAAGEFAAKDYTDPPPAPLIDAAELGSWSL 40



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>PIP23_ARATH (P30302) Aquaporin PIP2.3 (Plasma membrane intrinsic protein 2c)|
           (PIP2c) (TMP2C) (RD28-PIP) (Water stress-induced
           tonoplast intrinsic protein) (WSI-TIP)
          Length = 285

 Score = 47.8 bits (112), Expect = 8e-06
 Identities = 24/38 (63%), Positives = 27/38 (71%)
 Frame = +2

Query: 50  MAKDIEAAPPGGEYAAKDYSDPPPAPLFDAEELTKXSL 163
           MAKD+E   P G +  +DY DPPP P FDAEELTK SL
Sbjct: 1   MAKDVEG--PDG-FQTRDYEDPPPTPFFDAEELTKWSL 35



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>PIP22_ARATH (P43287) Aquaporin PIP2.2 (Plasma membrane intrinsic protein 2b)|
           (PIP2b) (TMP2b)
          Length = 285

 Score = 46.6 bits (109), Expect = 2e-05
 Identities = 23/38 (60%), Positives = 27/38 (71%)
 Frame = +2

Query: 50  MAKDIEAAPPGGEYAAKDYSDPPPAPLFDAEELTKXSL 163
           MAKD+E  P G  +  +DY DPPP P FDA+ELTK SL
Sbjct: 1   MAKDVEG-PEG--FQTRDYEDPPPTPFFDADELTKWSL 35



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>PIP21_ARATH (P43286) Aquaporin PIP2.1 (Plasma membrane intrinsic protein 2a)|
           (PIP2a)
          Length = 287

 Score = 44.7 bits (104), Expect = 7e-05
 Identities = 21/37 (56%), Positives = 24/37 (64%)
 Frame = +2

Query: 50  MAKDIEAAPPGGEYAAKDYSDPPPAPLFDAEELTKXS 160
           MAKD+EA P  G +  +DY DPPPAP  D  EL K S
Sbjct: 1   MAKDVEAVPGEG-FQTRDYQDPPPAPFIDGAELKKWS 36



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>PIP24_ARATH (Q9FF53) Probable aquaporin PIP2.4 (Plasma membrane intrinsic|
           protein 2.4)
          Length = 291

 Score = 44.7 bits (104), Expect = 7e-05
 Identities = 24/41 (58%), Positives = 27/41 (65%), Gaps = 3/41 (7%)
 Frame = +2

Query: 50  MAKDI---EAAPPGGEYAAKDYSDPPPAPLFDAEELTKXSL 163
           MAKD+   E+ PP    AA+DY DPPPAP FD EEL K  L
Sbjct: 1   MAKDLDVNESGPP----AARDYKDPPPAPFFDMEELRKWPL 37



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>PIP25_ARATH (Q9SV31) Probable aquaporin PIP2.5 (Plasma membrane intrinsic|
           protein 2d) (PIP2d)
          Length = 286

 Score = 38.5 bits (88), Expect = 0.005
 Identities = 16/24 (66%), Positives = 18/24 (75%)
 Frame = +2

Query: 89  YAAKDYSDPPPAPLFDAEELTKXS 160
           ++ KDY DPPP PLFDA EL K S
Sbjct: 12  FSGKDYQDPPPEPLFDATELGKWS 35



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>PIP24_ORYSA (Q8GRT8) Aquaporin PIP2.4 (Plasma membrane intrinsic protein 2.4)|
           (OsPIP2.4)
          Length = 286

 Score = 38.5 bits (88), Expect = 0.005
 Identities = 19/35 (54%), Positives = 22/35 (62%)
 Frame = +2

Query: 59  DIEAAPPGGEYAAKDYSDPPPAPLFDAEELTKXSL 163
           D+     GG   A+DY DPPPAPL D +EL K SL
Sbjct: 6   DVSTLEAGG---ARDYIDPPPAPLVDVDELGKWSL 37



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>PIP28_ORYSA (Q7Y1E6) Probable aquaporin PIP2.8 (Plasma membrane intrinsic|
           protein 2.8) (OsPIP2.8)
          Length = 280

 Score = 37.4 bits (85), Expect = 0.011
 Identities = 19/32 (59%), Positives = 19/32 (59%)
 Frame = +2

Query: 68  AAPPGGEYAAKDYSDPPPAPLFDAEELTKXSL 163
           AA  G     KDY DPPPAPL D  EL K SL
Sbjct: 2   AAGSGSGSNPKDYQDPPPAPLVDTGELGKWSL 33



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>PIP26_ORYSA (Q7XLR1) Probable aquaporin PIP2.6 (Plasma membrane intrinsic|
           protein 2.6) (OsPIP2.6)
          Length = 282

 Score = 37.0 bits (84), Expect = 0.015
 Identities = 17/33 (51%), Positives = 21/33 (63%)
 Frame = +2

Query: 50  MAKDIEAAPPGGEYAAKDYSDPPPAPLFDAEEL 148
           M+K++   P       KDY+DPPPAPLFD  EL
Sbjct: 1   MSKEVSEEPE--HVRPKDYTDPPPAPLFDVGEL 31



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>PIP25_ORYSA (Q8GRI8) Aquaporin PIP2.5 (Plasma membrane intrinsic protein 2.5)|
           (OsPIP2.5)
          Length = 283

 Score = 35.4 bits (80), Expect = 0.043
 Identities = 19/35 (54%), Positives = 23/35 (65%)
 Frame = +2

Query: 59  DIEAAPPGGEYAAKDYSDPPPAPLFDAEELTKXSL 163
           D+EA   GG    +DY DPPPAPL D +EL + SL
Sbjct: 6   DVEA---GG---VRDYEDPPPAPLVDIDELGRWSL 34



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>PIP2_PEA (P25794) Probable aquaporin PIP-type 7a (Turgor-responsive protein|
           7a) (Turgor-responsive protein 31)
          Length = 289

 Score = 35.0 bits (79), Expect = 0.056
 Identities = 14/21 (66%), Positives = 16/21 (76%)
 Frame = +2

Query: 98  KDYSDPPPAPLFDAEELTKXS 160
           KDY +PPPAPLF+  ELT  S
Sbjct: 32  KDYQEPPPAPLFEPSELTSWS 52



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>PIP27_ORYSA (Q651D5) Probable aquaporin PIP2.7 (Plasma membrane intrinsic|
           protein 2.7) (OsPIP2.7)
          Length = 290

 Score = 35.0 bits (79), Expect = 0.056
 Identities = 19/29 (65%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
 Frame = +2

Query: 80  GGEYAAK-DYSDPPPAPLFDAEELTKXSL 163
           GG  AAK  Y DPPPAPL D  EL K SL
Sbjct: 14  GGAAAAKAPYWDPPPAPLLDTSELGKWSL 42



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>PIP27_ARATH (P93004) Aquaporin PIP2.7 (Plasma membrane intrinsic protein 3)|
           (Salt stress-induced major intrinsic protein)
          Length = 280

 Score = 34.7 bits (78), Expect = 0.073
 Identities = 16/32 (50%), Positives = 18/32 (56%)
 Frame = +2

Query: 65  EAAPPGGEYAAKDYSDPPPAPLFDAEELTKXS 160
           E +  G  +  KDY DPPPAPL D  EL   S
Sbjct: 4   EVSEEGKTHHGKDYVDPPPAPLLDMGELKSWS 35



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>PIP13_ORYSA (Q9SXF8) Aquaporin PIP 1.3 (Plasma membrane intrinsic protein 1.3)|
           (OsPIP1.3) (Water channel protein RWC3) (RWC-3)
          Length = 288

 Score = 33.9 bits (76), Expect = 0.12
 Identities = 18/38 (47%), Positives = 22/38 (57%)
 Frame = +2

Query: 47  TMAKDIEAAPPGGEYAAKDYSDPPPAPLFDAEELTKXS 160
           T  + I  A  G E   KDY +PP AP+F+ EELT  S
Sbjct: 16  TERQPIGTAAQGAE--EKDYREPPAAPVFEVEELTSWS 51



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>PIP1_ATRCA (P42767) Aquaporin PIP-type|
          Length = 282

 Score = 33.1 bits (74), Expect = 0.21
 Identities = 15/33 (45%), Positives = 19/33 (57%)
 Frame = +2

Query: 50  MAKDIEAAPPGGEYAAKDYSDPPPAPLFDAEEL 148
           M+K++ +         KDY DPPPAP FD  EL
Sbjct: 1   MSKEVISEEGQVHQHGKDYVDPPPAPFFDMGEL 33



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>PIP1_LYCES (Q08451) Probable aquaporin PIP-type pTOM75 (Ripening-associated|
           membrane protein) (RAMP)
          Length = 286

 Score = 32.7 bits (73), Expect = 0.28
 Identities = 13/21 (61%), Positives = 16/21 (76%)
 Frame = +2

Query: 98  KDYSDPPPAPLFDAEELTKXS 160
           KDY +PPPAPLF+  EL+  S
Sbjct: 30  KDYKEPPPAPLFEPGELSSWS 50



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>PIP14_ARATH (Q39196) Probable aquaporin PIP1.4 (Plasma membrane intrinsic|
           protein 1.4) (Transmembrane protein C) (TMP-C)
          Length = 287

 Score = 32.7 bits (73), Expect = 0.28
 Identities = 13/21 (61%), Positives = 16/21 (76%)
 Frame = +2

Query: 98  KDYSDPPPAPLFDAEELTKXS 160
           KDY +PPPAPLF+  EL+  S
Sbjct: 30  KDYKEPPPAPLFEPGELSSWS 50



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>PIP12_ARATH (Q06611) Aquaporin PIP1.2 (Plasma membrane intrinsic protein 1b)|
           (PIP1b) (Transmembrane protein A) (TMP-A) (AthH2)
          Length = 286

 Score = 32.3 bits (72), Expect = 0.36
 Identities = 13/21 (61%), Positives = 15/21 (71%)
 Frame = +2

Query: 98  KDYSDPPPAPLFDAEELTKXS 160
           KDY +PPPAPLF+  EL   S
Sbjct: 29  KDYKEPPPAPLFEPGELASWS 49



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>PIP11_ORYSA (Q6EU94) Aquaporin PIP1.1 (Plasma membrane intrinsic protein 1a)|
           (PIP1a) (OsPIP1.1) (Water channel protein RWC1) (RWC-1)
          Length = 289

 Score = 32.0 bits (71), Expect = 0.47
 Identities = 13/21 (61%), Positives = 15/21 (71%)
 Frame = +2

Query: 98  KDYSDPPPAPLFDAEELTKXS 160
           KDY +PPPAPLF+  EL   S
Sbjct: 32  KDYKEPPPAPLFEPGELKSWS 52



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>PIP28_ARATH (Q9ZVX8) Probable aquaporin PIP2.8 (Plasma membrane intrinsic|
           protein 3b) (PIP3b)
          Length = 278

 Score = 32.0 bits (71), Expect = 0.47
 Identities = 13/17 (76%), Positives = 13/17 (76%)
 Frame = +2

Query: 98  KDYSDPPPAPLFDAEEL 148
           KDY DPPPAPL D  EL
Sbjct: 13  KDYVDPPPAPLLDMAEL 29



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>PIP13_ARATH (Q08733) Aquaporin PIP1.3 (Plasma membrane intrinsic protein 1c)|
           (PIP1c) (Transmembrane protein B) (TMP-B)
          Length = 286

 Score = 31.2 bits (69), Expect = 0.81
 Identities = 12/21 (57%), Positives = 15/21 (71%)
 Frame = +2

Query: 98  KDYSDPPPAPLFDAEELTKXS 160
           KDY +PPPAP F+  EL+  S
Sbjct: 29  KDYKEPPPAPFFEPGELSSWS 49



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>PIP11_VICFA (P61838) Aquaporin PIP1.1 (Plasma membrane intrinsic protein 1a)|
           (PIP1a) (Aquaporin 1) (Plasma membrane aquaporin 1)
          Length = 286

 Score = 31.2 bits (69), Expect = 0.81
 Identities = 12/21 (57%), Positives = 15/21 (71%)
 Frame = +2

Query: 98  KDYSDPPPAPLFDAEELTKXS 160
           KDY +PPPAP F+  EL+  S
Sbjct: 29  KDYKEPPPAPFFEPGELSSWS 49



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>PIP11_ARATH (P61837) Aquaporin PIP1.1 (Plasma membrane intrinsic protein 1a)|
           (PIP1a) (Aquaporin 1) (Plasma membrane aquaporin 1)
          Length = 286

 Score = 31.2 bits (69), Expect = 0.81
 Identities = 12/21 (57%), Positives = 15/21 (71%)
 Frame = +2

Query: 98  KDYSDPPPAPLFDAEELTKXS 160
           KDY +PPPAP F+  EL+  S
Sbjct: 29  KDYKEPPPAPFFEPGELSSWS 49



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>PIP15_ARATH (Q8LAA6) Probable aquaporin PIP1.5 (Plasma membrane intrinsic|
           protein 1d) (PIP1d)
          Length = 287

 Score = 31.2 bits (69), Expect = 0.81
 Identities = 14/40 (35%), Positives = 20/40 (50%)
 Frame = +2

Query: 41  GATMAKDIEAAPPGGEYAAKDYSDPPPAPLFDAEELTKXS 160
           GA    + +      +  +KDY +PPPAP F+  EL   S
Sbjct: 11  GANKFPERQPIGTAAQTESKDYKEPPPAPFFEPGELKSWS 50



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>PIP26_ARATH (Q9ZV07) Probable aquaporin PIP2.6 (Plasma membrane intrinsic|
           protein 2e) (PIP2e)
          Length = 289

 Score = 29.6 bits (65), Expect = 2.3
 Identities = 12/23 (52%), Positives = 14/23 (60%)
 Frame = +2

Query: 92  AAKDYSDPPPAPLFDAEELTKXS 160
           + KDY DPPP   F+  EL K S
Sbjct: 13  SGKDYLDPPPVKTFEVRELKKWS 35



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>SEM6C_HUMAN (Q9H3T2) Semaphorin-6C precursor (Semaphorin Y) (Sema Y)|
          Length = 930

 Score = 28.9 bits (63), Expect = 4.0
 Identities = 12/24 (50%), Positives = 15/24 (62%)
 Frame = -3

Query: 79  GWRRLDVLGHRRPPXPIDKVPAXG 8
           G RRL   GHR PP  + +VP+ G
Sbjct: 848 GGRRLPFSGHRAPPALLTRVPSGG 871



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>PK1L1_HUMAN (Q8TDX9) Polycystic kidney disease 1-like 1 protein (Polycystin-1L1)|
          Length = 2849

 Score = 28.1 bits (61), Expect = 6.8
 Identities = 14/27 (51%), Positives = 14/27 (51%)
 Frame = +2

Query: 65   EAAPPGGEYAAKDYSDPPPAPLFDAEE 145
            EA P GG   AKD S P   P   AEE
Sbjct: 1079 EAIPSGGRQPAKDTSFPGSGPSLSAEE 1105



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>GAG_SIVG1 (Q02843) Gag polyprotein [Contains: Core protein p17; Core protein|
           p24; Core protein p15]
          Length = 513

 Score = 27.7 bits (60), Expect = 8.9
 Identities = 12/23 (52%), Positives = 14/23 (60%)
 Frame = +2

Query: 20  HLVDRXRGATMAKDIEAAPPGGE 88
           HLVD+   A   K+   APPGGE
Sbjct: 109 HLVDKNEKAAKKKNETTAPPGGE 131


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,587,785
Number of Sequences: 219361
Number of extensions: 156251
Number of successful extensions: 744
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 713
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 739
length of database: 80,573,946
effective HSP length: 30
effective length of database: 73,993,116
effective search space used: 1775834784
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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