>KPEL_DROME (Q05652) Probable serine/threonine-protein kinase pelle (EC|
           2.7.11.1)
          Length = 501

 Score = 33.5 bits (75), Expect = 0.54
 Identities = 14/28 (50%), Positives = 17/28 (60%)
 Frame = -1

Query: 609 CRTMFRLGVDCTVTDPQERPSMLKVLER 526
           C      G+ CT  DPQ+RPSM  VL+R
Sbjct: 467 CMCAIEAGLHCTALDPQDRPSMNAVLKR 494

>Y496_MYCBO (P64708) Hypothetical glycosyl transferase Mb0496 (EC 2.-.-.-)|
          Length = 480

 Score = 33.1 bits (74), Expect = 0.71
 Identities = 19/43 (44%), Positives = 24/43 (55%)
 Frame = -2

Query: 134 AVSCGRLPVPGRDDGTATLLSPPQPHRSTAAVTHLCRLQRGPR 6
           A + G LPV  RD  T TL+S  +  +   A+ HL RL  GPR
Sbjct: 371 AAAVGGLPVAVRDGITGTLVSGHEVGQWADAIDHLLRLCAGPR 413

>Y486_MYCTU (P64707) Hypothetical glycosyl transferase Rv0486/MT0504 (EC|
           2.-.-.-)
          Length = 480

 Score = 33.1 bits (74), Expect = 0.71
 Identities = 19/43 (44%), Positives = 24/43 (55%)
 Frame = -2

Query: 134 AVSCGRLPVPGRDDGTATLLSPPQPHRSTAAVTHLCRLQRGPR 6
           A + G LPV  RD  T TL+S  +  +   A+ HL RL  GPR
Sbjct: 371 AAAVGGLPVAVRDGITGTLVSGHEVGQWADAIDHLLRLCAGPR 413

>RECQ4_HUMAN (O94761) ATP-dependent DNA helicase Q4 (EC 3.6.1.-) (RecQ|
           protein-like 4) (RecQ4) (RTS)
          Length = 1208

 Score = 32.7 bits (73), Expect = 0.93
 Identities = 22/51 (43%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
 Frame = -2

Query: 215 GRSAQGSSER*GSRLPRSIRGSLGAAAAVSCGRLPVP-GRDDGTATLLSPP 66
           GRS QGS    G RL  +++G+L A  A+  GR P P GR    A+   PP
Sbjct: 95  GRSRQGSVPDYGQRLKANLKGTLQAGPAL--GRRPWPLGRASSKASTPKPP 143

>CF015_MACMU (Q9BGL9) Protein C6orf15 homolog precursor (rmSTG)|
          Length = 314

 Score = 32.3 bits (72), Expect = 1.2
 Identities = 19/50 (38%), Positives = 27/50 (54%)
 Frame = -2

Query: 206 AQGSSER*GSRLPRSIRGSLGAAAAVSCGRLPVPGRDDGTATLLSPPQPH 57
           A  +++R G  LP  +   L +AAA++ G  P+PG     AT LSP   H
Sbjct: 120 AAAAADRLGEALPEEL-SYLSSAAALAPGSGPLPGESSPDATDLSPEASH 168

>GRSF1_MOUSE (Q8C5Q4) G-rich sequence factor 1 (GRSF-1)|
          Length = 479

 Score = 31.2 bits (69), Expect = 2.7
 Identities = 23/65 (35%), Positives = 27/65 (41%)
 Frame = +1

Query: 133 AAAAPRLPRIDLGSRLPHRSELPCALRPSSPARNAVCYLCLSQALN*RDPTLEQQPAAEY 312
           AAAA +   + LG     R   P   RPS+ A  A  Y  L   L  R       PA  Y
Sbjct: 57  AAAASQTRGLQLGPAAAGRLAGPIPARPSAAAAAAASYSALRAPLFPRSLAAAAGPARGY 116

Query: 313 SQNNK 327
           SQ +K
Sbjct: 117 SQESK 121

>KLF13_MOUSE (Q9JJZ6) Krueppel-like factor 13 (Transcription factor BTEB3)|
           (Basic transcription element-binding protein 3)
           (BTE-binding protein 3) (RANTES factor of late activated
           T-lymphocytes 1) (RFLAT-1) (Erythroid transcription
           factor FKLF-2)
          Length = 289

 Score = 30.8 bits (68), Expect = 3.5
 Identities = 15/29 (51%), Positives = 16/29 (55%)
 Frame = +1

Query: 79  RVAVPSSRPGTGRRPHETAAAAPRLPRID 165
           R  V   R G   RP   AAAAP LPR+D
Sbjct: 21  RAVVHEPREGPEPRPEGAAAAAPTLPRVD 49

>JPH3_MOUSE (Q9ET77) Junctophilin-3 (Junctophilin type 3) (JP-3)|
          Length = 744

 Score = 30.4 bits (67), Expect = 4.6
 Identities = 14/53 (26%), Positives = 26/53 (49%)
 Frame = +3

Query: 282 YTRAAASSGVQPEQQALKGFPCCSTSSRAPPSNTHNSRLKHTTNQDDQSEEKA 440
           Y +    S + P+   L+ FP   TS+  PP+    +++ H + Q    EE++
Sbjct: 461 YRKGTTPSDLTPDDSPLQSFPASPTST-PPPAPASRTKMAHFSRQVSVDEERS 512

>CAC1A_HUMAN (O00555) Voltage-dependent P/Q-type calcium channel alpha-1A subunit|
            (Voltage-gated calcium channel alpha subunit Cav2.1)
            (Calcium channel, L type, alpha-1 polypeptide isoform 4)
            (Brain calcium channel I) (BI)
          Length = 2505

 Score = 30.4 bits (67), Expect = 4.6
 Identities = 19/53 (35%), Positives = 25/53 (47%)
 Frame = +1

Query: 55   RCG*GGERRVAVPSSRPGTGRRPHETAAAAPRLPRIDLGSRLPHRSELPCALR 213
            R    G RR   P++ P  G RP     ++ R PR++     P RSE P A R
Sbjct: 2331 RAATSGPRRYPGPTAEPLAGDRPPTGGHSSGRSPRMERRVPGPARSESPRACR 2383

>CF015_HUMAN (Q6UXA7) Protein C6orf15 precursor (STG protein)|
          Length = 325

 Score = 30.0 bits (66), Expect = 6.0
 Identities = 18/46 (39%), Positives = 25/46 (54%)
 Frame = -2

Query: 206 AQGSSER*GSRLPRSIRGSLGAAAAVSCGRLPVPGRDDGTATLLSP 69
           A  + +R G  LP  +   L +AAA++ G  P+PG     AT LSP
Sbjct: 120 AAAAEDRLGEALPEEL-SYLSSAAALAPGSGPLPGESSPDATGLSP 164

>YXEE_BACSU (P54944) Hypothetical protein yxeE|
          Length = 121

 Score = 30.0 bits (66), Expect = 6.0
 Identities = 20/78 (25%), Positives = 36/78 (46%), Gaps = 11/78 (14%)
 Frame = +1

Query: 274 RDPTLEQQPAAEYSQN-----------NKH*RDSHAAQQVAEPPHQIPTTVDLNTPQIRT 420
           R P LE++ AA   QN           N+  R +    ++AE  +Q+   V+ +T ++  
Sbjct: 39  RQPALERRIAALERQNEQQSRELTRLTNEDRRQNREIARIAEQVNQLSQAVERHTRRLNR 98

Query: 421 INPRKRPYRNSVSFQVTS 474
           +N R R   N ++   T+
Sbjct: 99  LNQRLRTVENRLNIPFTA 116

>VGLB_PRVIF (P08355) Glycoprotein GII precursor|
          Length = 913

 Score = 30.0 bits (66), Expect = 6.0
 Identities = 25/66 (37%), Positives = 29/66 (43%)
 Frame = +1

Query: 43  AAVDRCG*GGERRVAVPSSRPGTGRRPHETAAAAPRLPRIDLGSRLPHRSELPCALRPSS 222
           AA   CG     R A  S  PGTG  P++ +A A  L  I+  S  P  SE P       
Sbjct: 51  AAAPPCGAAAVTRAASASPTPGTGATPNDVSAEA-SLEEIEAFS--PGPSEAPDGEYGDL 107

Query: 223 PARNAV 240
            AR AV
Sbjct: 108 DARTAV 113

>BGH3_MOUSE (P82198) Transforming growth factor-beta-induced protein ig-h3|
           precursor (Beta ig-h3)
          Length = 683

 Score = 29.6 bits (65), Expect = 7.9
 Identities = 19/68 (27%), Positives = 30/68 (44%)
 Frame = +1

Query: 337 DSHAAQQVAEPPHQIPTTVDLNTPQIRTINPRKRPYRNSVSFQVTSR*IEGDEATQCRAP 516
           D HA   V     ++ +T+  N  QI  I       R +V+    +  +EGD      AP
Sbjct: 221 DHHATNGVVHLIDKVISTITNNIQQIIEIEDTFETLRAAVAASGLNTVLEGDGQFTLLAP 280

Query: 517 TTESFQNL 540
           T E+F+ +
Sbjct: 281 TNEAFEKI 288

>YI32_AGRT7 (P05679) Insertion element IS136 hypothetical 21.2 kDa protein|
          Length = 194

 Score = 29.6 bits (65), Expect = 7.9
 Identities = 20/72 (27%), Positives = 30/72 (41%)
 Frame = -2

Query: 239 TAFRAGEEGRSAQGSSER*GSRLPRSIRGSLGAAAAVSCGRLPVPGRDDGTATLLSPPQP 60
           TAF A     +   +     S L + +RG     ++      P PGRD   ++L +  QP
Sbjct: 38  TAFIANRPSATRSAAISVFLSPLWKGLRGGFRPPSSCDRACAPTPGRDPPVSSLPNSRQP 97

Query: 59  HRSTAAVTHLCR 24
            R    + HL R
Sbjct: 98  ARQNPRLQHLPR 109


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 95,637,972
Number of Sequences: 219361
Number of extensions: 2016676
Number of successful extensions: 7521
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 7048
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7517
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5938641176
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)