ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal23d08
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK069474.1| Oryza sativa (japonica cultivar-group) cDNA clon... 208 1e-50
2dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 90 9e-15
3dbj|AP000969.1| Oryza sativa (japonica cultivar-group) genomic D... 90 9e-15
4gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 46 0.12
5dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.12
6gb|AC137698.1| Genomic sequence for Oryza sativa, Nipponbare str... 46 0.12
7dbj|AK121978.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.12
8dbj|AK109303.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.12
9gb|BC042278.1| Xenopus laevis SOCS box-containing WD protein SWi... 44 0.49
10emb|AL953865.9| Zebrafish DNA sequence from clone CH211-113E8 in... 44 0.49
11gb|AC114318.2| Homo sapiens chromosome 5 clone RP11-425E13, comp... 42 1.9
12gb|AC110009.3| Homo sapiens chromosome 5 clone RP11-508M8, compl... 42 1.9
13gb|AC016780.6| Genomic Sequence For Oryza sativa (japonica culti... 42 1.9
14dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.9
15gb|AC062032.5| Homo sapiens BAC clone RP11-515K12 from 2, comple... 42 1.9
16gb|AC027658.1| Oryza sativa (japonica cultivar-group) BAC nbxb00... 42 1.9
17gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 42 1.9
18gb|AC123862.5| Mus musculus BAC clone RP23-356A24 from 16, compl... 42 1.9
19gb|AC133005.4| Oryza sativa (japonica cultivar-group) chromosome... 40 7.6
20gb|AC146937.2| Oryza sativa (japonica cultivar-group) chromosome... 40 7.6
21gb|AC130602.5| Oryza sativa (japonica cultivar-group) chromosome... 40 7.6
22gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome 40 7.6
23gb|AC183833.2| Pan troglodytes BAC clone CH251-141C5 from chromo... 40 7.6
24gb|AC092852.6| Oryza sativa chromosome 3 BAC OSJNBa0032G11 genom... 40 7.6
25gb|AC102668.12| Mus musculus chromosome 6, clone RP23-296I18, co... 40 7.6
26ref|XM_755457.1| Ustilago maydis 521 hypothetical protein (UM044... 40 7.6
27gb|AC126257.4| Mus musculus BAC clone RP24-247A8 from chromosome... 40 7.6
28gb|AC099398.5| Homo sapiens BAC clone RP11-731K22 from 7, comple... 40 7.6
29emb|CR855865.5| Zebrafish DNA sequence from clone DKEY-267L2 in ... 40 7.6
30gb|CP000300.1| Methanococcoides burtonii DSM 6242, complete genome 40 7.6
31emb|BX901909.5| Zebrafish DNA sequence from clone CH211-42I14 in... 40 7.6
32emb|CR860241.1| Pongo pygmaeus mRNA; cDNA DKFZp469M0419 (from cl... 40 7.6
33gb|AC119072.1| Oryza sativa ssp. japonica cv. Nipponbare OSJNBa0... 40 7.6
34gb|DQ078673.1| Lepidophyma flavimaculatum clone B111 microsatell... 40 7.6
35gb|AC158994.4| Mus musculus BAC clone RP24-79P8 from chromosome ... 40 7.6
36emb|BX663607.13| Zebrafish DNA sequence from clone DKEY-30P18 in... 40 7.6
37gb|AC152416.2| Mus musculus BAC clone RP23-352L15 from chromosom... 40 7.6
38dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.6
39dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.6
40dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.6
41gb|AC025562.8| Homo sapiens BAC clone RP11-673J15 from 4, comple... 40 7.6
42gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 40 7.6
43gb|AC150560.5| Mus musculus BAC clone RP23-16I14 from 15, comple... 40 7.6
44emb|AL591669.5| Zebrafish DNA sequence from clone BUSM1-163L24 i... 40 7.6
45gb|AC153627.2| Mus musculus 6 BAC RP23-104H13 (Roswell Park Canc... 40 7.6
46emb|AL110505.5|CNS01DRA Human chromosome 14 DNA sequence BAC R-8... 40 7.6
47emb|CR761354.2| Xenopus tropicalis finished cDNA, clone TEgg033a24 40 7.6
48dbj|AP002347.3| Homo sapiens genomic DNA, chromosome 11q, clone:... 40 7.6
49gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 40 7.6
50gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 7.6
51emb|AL732644.3|CNS08C9J Oryza sativa chromosome 12, . BAC OSJNBa... 40 7.6 
>dbj|AK069474.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023019E21, full
           insert sequence
          Length = 1825

 Score =  208 bits (105), Expect = 1e-50
 Identities = 183/209 (87%)
 Strand = Plus / Plus

                                                                       
Query: 323 gaggtgccgcagatcatcacaaattacaaacagaagtcaacagaaggcctttctattgcc 382
           |||||||| |||||||| || |||||||| || ||||||||||||||||||||  |||| 
Sbjct: 290 gaggtgccacagatcataactaattacaagcataagtcaacagaaggcctttcccttgct 349

                                                                       
Query: 383 tttctgatgacctggatagttggggatttgtttaaccttgctggctgtttcctggaacct 442
           ||||| ||||| ||||| |||||||| || |||||||||  |||||| ||| ||||||||
Sbjct: 350 tttctaatgacatggattgttggggacttttttaaccttattggctgcttcttggaacct 409

                                                                       
Query: 443 gctactctgccaacacagttttacatggcattgctatataccatcacaactgtgattctc 502
           |  || ||||||||||| |||||||||||  ||||||| |||||||||||||| ||||||
Sbjct: 410 gagacgctgccaacacaattttacatggctctgctatacaccatcacaactgttattctc 469

                                        
Query: 503 actggacagacaatatactatagccacat 531
           |||||||||||| ||||||||||||||||
Sbjct: 470 actggacagacagtatactatagccacat 498
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 89.7 bits (45), Expect = 9e-15
 Identities = 54/57 (94%)
 Strand = Plus / Minus

                                                                        
Query: 475     gctatataccatcacaactgtgattctcactggacagacaatatactatagccacat 531
               |||||| |||||||||||||| |||||||||||||||||| ||||||||||||||||
Sbjct: 9136999 gctatacaccatcacaactgttattctcactggacagacagtatactatagccacat 9136943



 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 73/84 (86%)
 Strand = Plus / Minus

                                                                           
Query: 323     gaggtgccgcagatcatcacaaattacaaacagaagtcaacagaaggcctttctattgcc 382
               |||||||| |||||||| || |||||||| || ||||||||||||||||||||  |||| 
Sbjct: 9137861 gaggtgccacagatcataactaattacaagcataagtcaacagaaggcctttcccttgct 9137802

                                       
Query: 383     tttctgatgacctggatagttggg 406
               ||||| ||||| ||||| ||||||
Sbjct: 9137801 tttctaatgacatggattgttggg 9137778
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>dbj|AP000969.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
             clone:P0011D01
          Length = 168655

 Score = 89.7 bits (45), Expect = 9e-15
 Identities = 54/57 (94%)
 Strand = Plus / Minus

                                                                      
Query: 475   gctatataccatcacaactgtgattctcactggacagacaatatactatagccacat 531
             |||||| |||||||||||||| |||||||||||||||||| ||||||||||||||||
Sbjct: 37381 gctatacaccatcacaactgttattctcactggacagacagtatactatagccacat 37325



 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 73/84 (86%)
 Strand = Plus / Minus

                                                                         
Query: 323   gaggtgccgcagatcatcacaaattacaaacagaagtcaacagaaggcctttctattgcc 382
             |||||||| |||||||| || |||||||| || ||||||||||||||||||||  |||| 
Sbjct: 38243 gaggtgccacagatcataactaattacaagcataagtcaacagaaggcctttcccttgct 38184

                                     
Query: 383   tttctgatgacctggatagttggg 406
             ||||| ||||| ||||| ||||||
Sbjct: 38183 tttctaatgacatggattgttggg 38160
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                      
Query: 3       ggcggcgagggcgagcgggcgat 25
               |||||||||||||||||||||||
Sbjct: 9301746 ggcggcgagggcgagcgggcgat 9301724



 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 5        cggcgagggcgagcgggcga 24
                ||||||||||||||||||||
Sbjct: 35239289 cggcgagggcgagcgggcga 35239308
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                      
Query: 3       ggcggcgagggcgagcgggcgat 25
               |||||||||||||||||||||||
Sbjct: 9299579 ggcggcgagggcgagcgggcgat 9299557



 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 5        cggcgagggcgagcgggcga 24
                ||||||||||||||||||||
Sbjct: 35329361 cggcgagggcgagcgggcga 35329380
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>gb|AC137698.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBb0014A21, from chromosome 3, complete sequence
          Length = 134014

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 3     ggcggcgagggcgagcgggcgat 25
             |||||||||||||||||||||||
Sbjct: 54507 ggcggcgagggcgagcgggcgat 54529
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>dbj|AK121978.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033108K08,
          full insert sequence
          Length = 2894

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                 
Query: 3  ggcggcgagggcgagcgggcgat 25
          |||||||||||||||||||||||
Sbjct: 68 ggcggcgagggcgagcgggcgat 46
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>dbj|AK109303.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-188-E02,
          full insert sequence
          Length = 795

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                 
Query: 3  ggcggcgagggcgagcgggcgat 25
          |||||||||||||||||||||||
Sbjct: 60 ggcggcgagggcgagcgggcgat 38
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>gb|BC042278.1| Xenopus laevis SOCS box-containing WD protein SWiP-1, mRNA (cDNA
           clone MGC:53424 IMAGE:5571785), complete cds
          Length = 2475

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 256 gtgcagcacaaaggatggtgtt 277
           ||||||||||||||||||||||
Sbjct: 348 gtgcagcacaaaggatggtgtt 369
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>emb|AL953865.9| Zebrafish DNA sequence from clone CH211-113E8 in linkage group 1,
              complete sequence
          Length = 157603

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 454    aacacagttttacatggcattg 475
              ||||||||||||||||||||||
Sbjct: 113735 aacacagttttacatggcattg 113756
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>gb|AC114318.2| Homo sapiens chromosome 5 clone RP11-425E13, complete sequence
          Length = 163593

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 404    ggggatttgtttaaccttgctggct 428
              |||||| ||||||||||||||||||
Sbjct: 149559 ggggatctgtttaaccttgctggct 149583
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>gb|AC110009.3| Homo sapiens chromosome 5 clone RP11-508M8, complete sequence
          Length = 137632

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 404   ggggatttgtttaaccttgctggct 428
             |||||| ||||||||||||||||||
Sbjct: 56603 ggggatctgtttaaccttgctggct 56627
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>gb|AC016780.6| Genomic Sequence For Oryza sativa (japonica cultivar-group) cultivar
             Nipponbare Clone OSJNBa0061K21 From Chromosome 10,
             complete sequence
          Length = 112721

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 463   ttacatggcattgctatatac 483
             |||||||||||||||||||||
Sbjct: 79679 ttacatggcattgctatatac 79699
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 463      ttacatggcattgctatatac 483
                |||||||||||||||||||||
Sbjct: 14140151 ttacatggcattgctatatac 14140171
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>gb|AC062032.5| Homo sapiens BAC clone RP11-515K12 from 2, complete sequence
          Length = 182147

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 248   tactgcctgtgcagcacaaag 268
             |||||||||||||||||||||
Sbjct: 47380 tactgcctgtgcagcacaaag 47360
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>gb|AC027658.1| Oryza sativa (japonica cultivar-group) BAC nbxb0006I13 chromosome 10,
             complete sequence
          Length = 142737

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 463   ttacatggcattgctatatac 483
             |||||||||||||||||||||
Sbjct: 12224 ttacatggcattgctatatac 12244
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 463      ttacatggcattgctatatac 483
                |||||||||||||||||||||
Sbjct: 14148393 ttacatggcattgctatatac 14148413
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>gb|AC123862.5| Mus musculus BAC clone RP23-356A24 from 16, complete sequence
          Length = 223030

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 534    accatcttaaagtaaagaaaa 554
              |||||||||||||||||||||
Sbjct: 148138 accatcttaaagtaaagaaaa 148118
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>gb|AC133005.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0052C16,
              complete sequence
          Length = 137872

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 5      cggcgagggcgagcgggcga 24
              ||||||||||||||||||||
Sbjct: 119359 cggcgagggcgagcgggcga 119340
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>gb|AC146937.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0004O15 map near R3342S, complete sequence
          Length = 140142

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 1     gcggcggcgagggcgagcgg 20
             ||||||||||||||||||||
Sbjct: 71226 gcggcggcgagggcgagcgg 71245
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>gb|AC130602.5| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1122D01,
             complete sequence
          Length = 126532

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 5     cggcgagggcgagcgggcga 24
             ||||||||||||||||||||
Sbjct: 12490 cggcgagggcgagcgggcga 12509
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>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome
          Length = 3345170

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 1      gcggcggcgagggcgagcgg 20
              ||||||||||||||||||||
Sbjct: 226120 gcggcggcgagggcgagcgg 226139
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>gb|AC183833.2| Pan troglodytes BAC clone CH251-141C5 from chromosome 7, complete
              sequence
          Length = 155911

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 270    atggtgttgccttgggtctt 289
              ||||||||||||||||||||
Sbjct: 144936 atggtgttgccttgggtctt 144955
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>gb|AC092852.6| Oryza sativa chromosome 3 BAC OSJNBa0032G11 genomic sequence, complete
              sequence
          Length = 156606

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 5      cggcgagggcgagcgggcga 24
              ||||||||||||||||||||
Sbjct: 118050 cggcgagggcgagcgggcga 118069
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>gb|AC102668.12| Mus musculus chromosome 6, clone RP23-296I18, complete sequence
          Length = 186488

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 534   accatcttaaagtaaagaaa 553
             ||||||||||||||||||||
Sbjct: 46513 accatcttaaagtaaagaaa 46532
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>ref|XM_755457.1| Ustilago maydis 521 hypothetical protein (UM04403.1) partial mRNA
          Length = 4536

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 189  ctcctccgagctgcccatca 208
            ||||||||||||||||||||
Sbjct: 2238 ctcctccgagctgcccatca 2257
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>gb|AC126257.4| Mus musculus BAC clone RP24-247A8 from chromosome 9, complete sequence
          Length = 174764

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 252   gcctgtgcagcacaaaggat 271
             ||||||||||||||||||||
Sbjct: 18964 gcctgtgcagcacaaaggat 18983
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>gb|AC099398.5| Homo sapiens BAC clone RP11-731K22 from 7, complete sequence
          Length = 86311

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 270   atggtgttgccttgggtctt 289
             ||||||||||||||||||||
Sbjct: 38830 atggtgttgccttgggtctt 38849
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>emb|CR855865.5| Zebrafish DNA sequence from clone DKEY-267L2 in linkage group 3,
             complete sequence
          Length = 149895

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 461   ttttacatggcattgctata 480
             ||||||||||||||||||||
Sbjct: 78505 ttttacatggcattgctata 78524
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>gb|CP000300.1| Methanococcoides burtonii DSM 6242, complete genome
          Length = 2575032

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                           
Query: 180     gtggaacgcctcctccgagctgcccatc 207
               ||||||| ||||||||||||||| ||||
Sbjct: 1889547 gtggaactcctcctccgagctgcacatc 1889574
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>emb|BX901909.5| Zebrafish DNA sequence from clone CH211-42I14 in linkage group 3,
             complete sequence
          Length = 90216

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 461   ttttacatggcattgctata 480
             ||||||||||||||||||||
Sbjct: 24674 ttttacatggcattgctata 24693
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>emb|CR860241.1| Pongo pygmaeus mRNA; cDNA DKFZp469M0419 (from clone DKFZp469M0419)
          Length = 3394

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 526 ccacatctaccatcttaaag 545
           ||||||||||||||||||||
Sbjct: 295 ccacatctaccatcttaaag 276
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>gb|AC119072.1| Oryza sativa ssp. japonica cv. Nipponbare OSJNBa0073N20 BAC genomic
             sequence, complete sequence
          Length = 147289

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 5     cggcgagggcgagcgggcga 24
             ||||||||||||||||||||
Sbjct: 96265 cggcgagggcgagcgggcga 96284
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>gb|DQ078673.1| Lepidophyma flavimaculatum clone B111 microsatellite sequence
          Length = 629

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 176 ttcagtggaacgcctcctcc 195
           ||||||||||||||||||||
Sbjct: 367 ttcagtggaacgcctcctcc 348
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>gb|AC158994.4| Mus musculus BAC clone RP24-79P8 from chromosome 5, complete sequence
          Length = 201330

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 357    agtcaacagaaggcctttct 376
              ||||||||||||||||||||
Sbjct: 161898 agtcaacagaaggcctttct 161917
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>emb|BX663607.13| Zebrafish DNA sequence from clone DKEY-30P18 in linkage group 6, complete
              sequence
          Length = 216068

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 467    atggcattgctatataccat 486
              ||||||||||||||||||||
Sbjct: 112574 atggcattgctatataccat 112555
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>gb|AC152416.2| Mus musculus BAC clone RP23-352L15 from chromosome 5, complete sequence
          Length = 204014

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 357   agtcaacagaaggcctttct 376
             ||||||||||||||||||||
Sbjct: 76709 agtcaacagaaggcctttct 76728
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 5        cggcgagggcgagcgggcga 24
                ||||||||||||||||||||
Sbjct: 14168589 cggcgagggcgagcgggcga 14168608
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 1        gcggcggcgagggcgagcgg 20
                ||||||||||||||||||||
Sbjct: 27650747 gcggcggcgagggcgagcgg 27650728



 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 5       cggcgagggcgagcgggcga 24
               ||||||||||||||||||||
Sbjct: 6447965 cggcgagggcgagcgggcga 6447946
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 5        cggcgagggcgagcgggcga 24
                ||||||||||||||||||||
Sbjct: 21893276 cggcgagggcgagcgggcga 21893295
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>gb|AC025562.8| Homo sapiens BAC clone RP11-673J15 from 4, complete sequence
          Length = 114360

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 441   ctgctactctgccaacacagtttt 464
             |||||||||||||||| |||||||
Sbjct: 16341 ctgctactctgccaactcagtttt 16364
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 1       gcggcggcgagggcgagcgg 20
               ||||||||||||||||||||
Sbjct: 4504368 gcggcggcgagggcgagcgg 4504387
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>gb|AC150560.5| Mus musculus BAC clone RP23-16I14 from 15, complete sequence
          Length = 208801

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 250   ctgcctgtgcagcacaaagg 269
             ||||||||||||||||||||
Sbjct: 60429 ctgcctgtgcagcacaaagg 60410
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>emb|AL591669.5| Zebrafish DNA sequence from clone BUSM1-163L24 in linkage group 3,
             complete sequence
          Length = 107839

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 461   ttttacatggcattgctata 480
             ||||||||||||||||||||
Sbjct: 54408 ttttacatggcattgctata 54427
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>gb|AC153627.2| Mus musculus 6 BAC RP23-104H13 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 198060

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 534    accatcttaaagtaaagaaa 553
              ||||||||||||||||||||
Sbjct: 167547 accatcttaaagtaaagaaa 167566
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>emb|AL110505.5|CNS01DRA Human chromosome 14 DNA sequence BAC R-816J8 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 198441

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 339   tcacaaattacaaacagaag 358
             ||||||||||||||||||||
Sbjct: 14867 tcacaaattacaaacagaag 14886
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>emb|CR761354.2| Xenopus tropicalis finished cDNA, clone TEgg033a24
          Length = 1608

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 372 tttctattgcctttctgatg 391
           ||||||||||||||||||||
Sbjct: 112 tttctattgcctttctgatg 131
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>dbj|AP002347.3| Homo sapiens genomic DNA, chromosome 11q, clone:CTD-2514A21, complete
             sequence
          Length = 130977

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 540   ttaaagtaaagaaaactggg 559
             ||||||||||||||||||||
Sbjct: 44682 ttaaagtaaagaaaactggg 44663
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 1        gcggcggcgagggcgagcgg 20
                ||||||||||||||||||||
Sbjct: 27674735 gcggcggcgagggcgagcgg 27674716



 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 5       cggcgagggcgagcgggcga 24
               ||||||||||||||||||||
Sbjct: 6514432 cggcgagggcgagcgggcga 6514413
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 5        cggcgagggcgagcgggcga 24
                ||||||||||||||||||||
Sbjct: 14122869 cggcgagggcgagcgggcga 14122888
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>emb|AL732644.3|CNS08C9J Oryza sativa chromosome 12, . BAC OSJNBa0016A01 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 150703

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 5     cggcgagggcgagcgggcga 24
             ||||||||||||||||||||
Sbjct: 95130 cggcgagggcgagcgggcga 95149


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,120,401
Number of Sequences: 3902068
Number of extensions: 4120401
Number of successful extensions: 82892
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 55
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 82146
Number of HSP's gapped (non-prelim): 746
length of query: 561
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 538
effective length of database: 17,143,297,704
effective search space: 9223094164752
effective search space used: 9223094164752
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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