Clone Information

BLAST Search Result

Clone Name	baal23c12
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	PALA_YARLI (Q8WZL4) pH-response regulator protein RIM20	63	6e-10
2	PDC6I_MOUSE (Q9WU78) Programmed cell death 6-interacting protein...	63	7e-10
3	PDC6I_XENLA (Q9W6C5) Programmed cell death 6-interacting protein...	62	1e-09
4	ALX1_CAEEL (P34552) Apoptosis-linked gene 2-interacting protein ...	62	2e-09
5	PDC6I_HUMAN (Q8WUM4) Programmed cell death 6-interacting protein...	60	4e-09
6	PALA_EMENI (P79020) pH-response regulator protein palA/RIM20	57	5e-08
7	PALA_CRYNE (Q5KEK0) pH-response regulator protein palA/RIM20	55	1e-07
8	PALA_DEBHA (Q6BLT2) pH-response regulator protein palA/RIM20	54	4e-07
9	PALA_ASPOR (Q5KU05) pH-response regulator protein palA/RIM20	53	6e-07
10	BRO1_EMENI (Q6XPR4) Vacuolar protein-sorting protein bro1 (BRO d...	44	3e-04
11	PALA_CANAL (Q9UW12) pH-response regulator protein palA/RIM20	43	6e-04
12	PALA_YEAST (Q12033) pH-response regulator protein palA/RIM20 (Re...	42	0.001
13	BRO1_ASPFU (Q4X0Z5) Vacuolar protein-sorting protein bro1 (BRO d...	42	0.002
14	RAD50_PYRHO (O58687) DNA double-strand break repair rad50 ATPase	40	0.007
15	BRO1_YARLI (Q6CGJ5) Vacuolar protein-sorting protein BRO1 (BRO d...	39	0.009
16	DMDA_DROME (Q9VDW6) Dystrophin, isoforms A/C/DLP1/DLP3	37	0.042
17	MRCKG_HUMAN (Q6DT37) Serine/threonine-protein kinase MRCK gamma ...	37	0.055
18	CENPE_HUMAN (Q02224) Centromeric protein E (CENP-E protein)	36	0.072
19	MYS3_HYDAT (P39922) Myosin heavy chain, clone 203 (Fragment)	36	0.072
20	NIN_HUMAN (Q8N4C6) Ninein (hNinein)	36	0.094
21	EFHD_DROME (Q9VJ26) EF-hand domain-containing protein CG10641 (S...	35	0.12
22	NIN_MOUSE (Q61043) Ninein	35	0.16
23	ARHG6_MOUSE (Q8K4I3) Rho guanine nucleotide exchange factor 6 (R...	34	0.27
24	ARHG6_RAT (Q5XXR3) Rho guanine nucleotide exchange factor 6 (Rac...	34	0.36
25	ARHG6_HUMAN (Q15052) Rho guanine nucleotide exchange factor 6 (R...	33	0.47
26	CL190_DROME (Q9VJE5) Restin homolog (Cytoplasmic linker protein ...	33	0.61
27	MRIP_MOUSE (P97434) Myosin phosphatase Rho-interacting protein (...	32	1.4
28	MRIP_HUMAN (Q6WCQ1) Myosin phosphatase Rho-interacting protein (...	32	1.4
29	MRIP_RAT (Q9ERE6) Myosin phosphatase Rho-interacting protein (Rh...	32	1.4
30	CING_MOUSE (P59242) Cingulin	32	1.8
31	SAS6_MOUSE (Q80UK7) Spindle assembly abnormal protein 6 homolog	31	2.3
32	GUAAA_PICTO (Q6KZC5) GMP synthase [glutamine-hydrolyzing] subuni...	31	2.3
33	SAS6_BRARE (Q7ZVT3) Spindle assembly abnormal protein 6 homolog	31	2.3
34	BRO1_USTMA (Q4PHA8) Vacuolar protein-sorting protein BRO1 (BRO d...	30	4.0
35	MACOI_RAT (Q4V7D3) Macoilin (Transmembrane protein 57)	30	4.0
36	MACOI_PIG (Q2TLZ2) Macoilin (Transmembrane protein 57)	30	4.0
37	MACOI_PANTR (Q2TLZ5) Macoilin (Transmembrane protein 57)	30	4.0
38	MACOI_MOUSE (Q7TQE6) Macoilin (Transmembrane protein 57) (Brain-...	30	4.0
39	MACOI_HUMAN (Q8N5G2) Macoilin (Transmembrane protein 57)	30	4.0
40	MACOI_CANFA (Q2TLZ1) Macoilin (Transmembrane protein 57)	30	4.0
41	MACOI_BOVIN (Q2TLZ3) Macoilin (Transmembrane protein 57)	30	4.0
42	BIOH_XANOR (Q5H6D1) Carboxylesterase bioH (EC 3.1.1.1) (Biotin s...	30	4.0
43	TRI55_RAT (Q5PQN5) Tripartite motif-containing 63 (Muscle-specif...	30	4.0
44	DMN_HUMAN (O15061) Desmuslin	30	4.0
45	NF2L1_MOUSE (Q61985) Nuclear factor erythroid 2-related factor 1...	30	4.0
46	BCSC_ECO57 (Q8X5M0) Cellulose synthase operon protein C	30	5.2
47	MACOI_MACMU (Q2TLZ4) Macoilin (Transmembrane protein 57)	30	5.2
48	RPOC_CHLCH (Q3ATP4) DNA-directed RNA polymerase beta' chain (EC ...	30	5.2
49	CCD41_HUMAN (Q9Y592) Coiled-coil domain-containing protein 41 (N...	30	5.2
50	YFI6_YEAST (P43597) Hypothetical 137.7 kDa protein in UGS1-FAB1 ...	30	5.2
51	MYS9_DROME (Q01989) Myosin heavy chain 95F (95F MHC) (Jaguar pro...	30	5.2
52	MRCKB_HUMAN (Q9Y5S2) Serine/threonine-protein kinase MRCK beta (...	30	5.2
53	BCSC_ECOLI (P37650) Cellulose synthase operon protein C	30	5.2
54	LTI78_ARATH (Q06738) Low-temperature-induced 78 kDa protein (Des...	30	6.7
55	DXR_CLOTE (Q895K5) 1-deoxy-D-xylulose 5-phosphate reductoisomera...	29	8.8
56	CLPC_CHLPN (Q9Z8A6) Probable ATP-dependent Clp protease ATP-bind...	29	8.8
57	CING_HUMAN (Q9P2M7) Cingulin	29	8.8
58	YQFQ_BACSU (P54474) Hypothetical protein yqfQ	29	8.8
59	MFP1_ARATH (Q9LW85) MAR binding filament-like protein 1	29	8.8
60	LBN_MOUSE (Q8K1G2) Limbin	29	8.8
61	NUP62_RAT (P17955) Nuclear pore glycoprotein p62 (62 kDa nucleop...	29	8.8
62	NUP62_MOUSE (Q63850) Nuclear pore glycoprotein p62 (62 kDa nucle...	29	8.8

>PALA_YARLI (Q8WZL4) pH-response regulator protein RIM20|
          Length = 773

 Score = 63.2 bits (152), Expect = 6e-10
 Identities = 58/195 (29%), Positives = 90/195 (46%), Gaps = 5/195 (2%)
 Frame = +3

Query: 15  DDIIRTQAEKLQQSSEITRVRLKEMDLPDSILSLEGNVSIPADLKEDVEAVQISGGPAGL 194
           D I+ +   +L+  +      L EM LP S+ S+E    IPAD+    + ++      GL
Sbjct: 381 DKIVSSIESQLKNCTNSKNQALVEMALPGSLDSVEKPKGIPADIIAHSDQIK---SERGL 437

Query: 195 EAELQQLRDLNRVN---QELLVQTEEMLQKEASEDAQFRTQFGSRWTRPQSSTLTKNIQD 365
           E   + ++D+ R+    ++ L   + +L  E SED   R +  S WTR  S     ++  
Sbjct: 438 ETTREAVKDVQRLAATARQELEAAKAVLDDERSEDEMLRRKNNSGWTRFDSKEAGAHLYT 497

Query: 366 RLNLFAGNLKKAAASDALIERDVKESYPLMSILD--RRPIESALPSISRPIMSLDGNEDA 539
           RL      L  A ASD L+   + E   L+SIL+  R  +E+ LPS    + S +     
Sbjct: 498 RLAELEQYLADAGASDKLVRGKLDEIDYLLSILNSGRSALENYLPSSVSGVRSPEVKRQ- 556

Query: 540 IVGALKQSLRQLESL 584
            V  L+  L  LESL
Sbjct: 557 -VPHLRDLLNNLESL 570

to top

>PDC6I_MOUSE (Q9WU78) Programmed cell death 6-interacting protein|
           (ALG-2-interacting protein X) (ALG-2-interacting protein
           1) (E2F1-inducible protein) (Eig2)
          Length = 869

 Score = 62.8 bits (151), Expect = 7e-10
 Identities = 43/191 (22%), Positives = 96/191 (50%), Gaps = 2/191 (1%)
 Frame = +3

Query: 18  DIIRTQAEKLQQSSEITRVRLKEMDLPDSILSLEGNVSIPADLKEDVEAVQISGGPAGLE 197
           D++     ++++++ +    L  ++LP +I  + G+ ++P  +     +V   GG   ++
Sbjct: 376 DLVNRSIAQMREATTLANGVLASLNLPAAIEDVSGD-TVPQSILTKSTSVVEQGGIQTVD 434

Query: 198 AELQQLRDLNRVNQELLVQTEEMLQKEASEDAQFRTQFGSRWTRPQSSTLTKNIQDRLNL 377
             +++L +L + N+E+L ++  +L +E + D   R +F  RW R  S+ L K ++     
Sbjct: 435 QLIKELPELLQRNREILEESLRLLDEEEATDNDLRAKFKDRWQRTPSNDLYKPLRAEGAK 494

Query: 378 FAGNLKKAAASDALIERDVKESYPLMSIL--DRRPIESALPSISRPIMSLDGNEDAIVGA 551
           F   L KA  +D  ++   +     +++L      + +A+PS + P  ++ G+E  +V  
Sbjct: 495 FRAVLDKAVQADGQVKERYQSHRDTIALLCKPEPEVNAAIPS-ANPAKTMQGSE--VVSV 551

Query: 552 LKQSLRQLESL 584
           LK  L  L+ +
Sbjct: 552 LKSLLSNLDEI 562

to top

>PDC6I_XENLA (Q9W6C5) Programmed cell death 6-interacting protein (Signal|
           transduction protein Xp95)
          Length = 867

 Score = 62.0 bits (149), Expect = 1e-09
 Identities = 46/191 (24%), Positives = 97/191 (50%), Gaps = 2/191 (1%)
 Frame = +3

Query: 18  DIIRTQAEKLQQSSEITRVRLKEMDLPDSILSLEGNVSIPADLKEDVEAVQISGGPAGLE 197
           ++I +   +++ ++      L  ++LP ++  + G+ SIP  +    + V   GG   + 
Sbjct: 375 ELINSTIAQMRDATIFANGVLASLNLPAAVEDVSGD-SIPQSILNKSKTVIEQGGIQTIG 433

Query: 198 AELQQLRDLNRVNQELLVQTEEMLQKEASEDAQFRTQFGSRWTRPQSSTLTKNIQDRLNL 377
             ++ L +L + N+E+L ++ + L +E + D   + +F  RW R  S+ L K ++   + 
Sbjct: 434 QLIRDLPELLQRNKEILEESLKFLDEEEATDNDLKAKFKDRWQRTPSTELYKPLRSEGSN 493

Query: 378 FAGNLKKAAASDALIERDVKESYPLMSILDRRPIE--SALPSISRPIMSLDGNEDAIVGA 551
           F   L KA  +DA+++   +     + IL +   E  +A+PS + P  ++ G+E  +V  
Sbjct: 494 FRNVLDKAIGADAVVKERYQSHREAIVILCKPEAELNAAIPS-ANPAKTMQGSE--VVTV 550

Query: 552 LKQSLRQLESL 584
           LK  L +L+ +
Sbjct: 551 LKSLLNKLDDM 561

to top

>ALX1_CAEEL (P34552) Apoptosis-linked gene 2-interacting protein X 1 (Protein|
           pqn-58) (Protein YNK1)
          Length = 882

 Score = 61.6 bits (148), Expect = 2e-09
 Identities = 33/161 (20%), Positives = 81/161 (50%), Gaps = 2/161 (1%)
 Frame = +3

Query: 18  DIIRTQAEKLQQSSEITRVRLKEMDLPDSILSLEGNVSIPADLKEDVEAVQISGGPAGLE 197
           +++  +  ++++++++    L  ++LP ++  +    ++P  LK     ++ +GG + + 
Sbjct: 382 ELVNMETVRMREATQLMNGVLASLNLPAALDDVTSTETLPESLKLKSAKLKQNGGSSEIM 441

Query: 198 AELQQLRDLNRVNQELLVQTEEMLQKEASEDAQFRTQFGSRWTRPQSSTLTKNIQDRLNL 377
               +L  L + N+++L +T  +L +E   D   R Q G++WTR  S  LT  +   +  
Sbjct: 442 RLFSELPTLYQRNEDILTETSRILNEEKESDDTMRKQLGTKWTRMSSEQLTGPLVTEIGK 501

Query: 378 FAGNLKKAAASDALIERDVKESYPLMSILDRRPIE--SALP 494
           + G L  A+ +D +++   +     + +L +   E  S++P
Sbjct: 502 YRGILHTASNADKMVKEKFESHRQGIELLSKNESELRSSIP 542

to top

>PDC6I_HUMAN (Q8WUM4) Programmed cell death 6-interacting protein|
           (PDCD6-interacting protein) (ALG-2-interacting protein
           1) (Hp95)
          Length = 868

 Score = 60.5 bits (145), Expect = 4e-09
 Identities = 45/192 (23%), Positives = 99/192 (51%), Gaps = 3/192 (1%)
 Frame = +3

Query: 18  DIIRTQAEKLQQSSEITRVRLKEMDLPDSILSLEGNVSIPADLKEDVEAVQISGGPAGLE 197
           D++     ++++++ +    L  ++LP +I  + G+ ++P  +     +V   GG   ++
Sbjct: 376 DLVNRSIAQMREATTLANGVLASLNLPAAIEDVSGD-TVPQSILTKSRSVIEQGGIQTVD 434

Query: 198 AELQQLRDLNRVNQELLVQTEEMLQKEASEDAQFRTQFGSRWTRPQSSTLTKNIQDRLNL 377
             +++L +L + N+E+L ++  +L +E + D   R +F  RW R  S+ L K ++     
Sbjct: 435 QLIKELPELLQRNREILDESLRLLDEEEATDNDLRAKFKERWQRTPSNELYKPLRAEGTN 494

Query: 378 FAGNLKKAAASDALIERDVKESYPLMSILDRRP---IESALPSISRPIMSLDGNEDAIVG 548
           F   L KA  +D  + ++  +S+    +L  +P   + +A+PS + P  ++ G+E  +V 
Sbjct: 495 FRTVLDKAVQADGQV-KECYQSHRDTIVLLCKPEPELNAAIPS-ANPAKTMQGSE--VVN 550

Query: 549 ALKQSLRQLESL 584
            LK  L  L+ +
Sbjct: 551 VLKSLLSNLDEV 562

to top

>PALA_EMENI (P79020) pH-response regulator protein palA/RIM20|
          Length = 847

 Score = 56.6 bits (135), Expect = 5e-08
 Identities = 40/158 (25%), Positives = 73/158 (46%), Gaps = 3/158 (1%)
 Frame = +3

Query: 42  KLQQSSEITRVRLKEMDLPDSILSLEGNVSIPADLKEDVEAVQISGGPAGLEAELQQLRD 221
           +L+  ++  R  L  ++LP S+ +LE  + +P  L    E ++   G   L   L  +  
Sbjct: 389 ELENMTDKLRDLLSSLNLPGSLQALEKPLGLPPSLVAHAEEMRQQDGLNRLRKSLLDIAK 448

Query: 222 LNRVNQELLVQTEEMLQKEASEDAQFRTQFGS-RWTRPQSSTLTKNIQDRLNLFAGNLKK 398
           +   ++ +  +  E+L  E +ED   R +FG+ RWTR  S      +        G    
Sbjct: 449 VKSNDRAVYTEGVELLAAEKAEDDASRRKFGTDRWTREASEAAAPKLYTTAREIDGYFTS 508

Query: 399 AAASDALIERDVKESYPLMSIL--DRRPIESALPSISR 506
           A +SD L+E+ + +S  +  +L    R +E+ +PS  R
Sbjct: 509 AQSSDNLVEQKLHDSEAVFRVLTGTNRDLEAFVPSSRR 546

to top

>PALA_CRYNE (Q5KEK0) pH-response regulator protein palA/RIM20|
          Length = 902

 Score = 55.5 bits (132), Expect = 1e-07
 Identities = 48/191 (25%), Positives = 88/191 (46%), Gaps = 3/191 (1%)
 Frame = +3

Query: 15  DDIIRTQAEKLQQSSEITRVRLKEMDLPDSILSLEGNVSIPADLKEDVEAVQISGGPAGL 194
           D ++R    K ++   +    L+ ++LP SI +L+  V +P  L +  E V  SGG   +
Sbjct: 398 DTLVRDLDGKREELDGLAASTLQSLNLPGSIQALDRPVGLPPSLLKKSEEVASSGGIERI 457

Query: 195 EAELQQLRDLNRVNQELLVQTEEMLQKEASE-DAQFRTQFGSRWTRPQSSTLTKNIQDRL 371
            + L ++  L   N + L +  ++L +EA+E ++    Q   + TR  S    + +    
Sbjct: 458 RSLLDEVNRLAHANVQSLNEAMDILDQEATENESLIARQPELQQTRQPSHVANQPLIQMA 517

Query: 372 NLFAGNLKKAAASDALIERDVKESYPLMSIL--DRRPIESALPSISRPIMSLDGNEDAIV 545
             +   +K+A  SDA +    +E   L+ IL      +E  +P  + P  SL  +    V
Sbjct: 518 EQYEATIKQAGGSDATVRAKWEEWARLVGILAAGEMEMEDYVPGTTSPSGSLPPS----V 573

Query: 546 GALKQSLRQLE 578
             L+ SL +L+
Sbjct: 574 RPLRASLEELD 584

to top

>PALA_DEBHA (Q6BLT2) pH-response regulator protein palA/RIM20|
          Length = 766

 Score = 53.5 bits (127), Expect = 4e-07
 Identities = 40/154 (25%), Positives = 72/154 (46%), Gaps = 2/154 (1%)
 Frame = +3

Query: 6   EMVDDIIRTQ-AEKLQQSSEITRVRLKEMDLPDSILSLEGNVSIPADLKEDVEAVQISGG 182
           E  D  IR    + +Q  ++I    + E +LP SI +++   ++P  + +  + +   GG
Sbjct: 374 ERQDSFIRDLFIDPIQSLNKIMYKFITERNLPASIDTIQKPENLPESIIQHSQEIISYGG 433

Query: 183 PAGLEAELQQLRDLNRVNQELLVQTEEMLQKEASEDAQFRTQFGS-RWTRPQSSTLTKNI 359
              +E  L ++  L   ++ +L   +E L+ EA ED   R + GS RW RP+SS  +   
Sbjct: 434 TKLIEDSLNEIAKLTLESRHILEGCQERLKIEADEDDIMRERQGSQRWARPKSSEASSEF 493

Query: 360 QDRLNLFAGNLKKAAASDALIERDVKESYPLMSI 461
            +++N     L +A   D  I     E  P + +
Sbjct: 494 INKINKMEQYLDQAKEGDQFIISQYHEIEPYLQL 527

to top

>PALA_ASPOR (Q5KU05) pH-response regulator protein palA/RIM20|
          Length = 828

 Score = 53.1 bits (126), Expect = 6e-07
 Identities = 39/170 (22%), Positives = 76/170 (44%), Gaps = 3/170 (1%)
 Frame = +3

Query: 42  KLQQSSEITRVRLKEMDLPDSILSLEGNVSIPADLKEDVEAVQISGGPAGLEAELQQLRD 221
           +L+  ++  R  L  ++LP S+ +LE  + +P  L    E ++   G   L   L+    
Sbjct: 389 ELETMTDKLRDLLSSLNLPGSLQALEKPLGLPPTLVSHAEEMRQQDGLNRLRRSLEDTAR 448

Query: 222 LNRVNQELLVQTEEMLQKEASEDAQFRTQFGS-RWTRPQSSTLTKNIQDRLNLFAGNLKK 398
           +   ++    +  E+L  E +ED   R ++G+ RW R  S      +        G    
Sbjct: 449 VKANDKAAYNEGVELLAAEKAEDDSSRRKYGTDRWAREPSEAAASKLYTTAREIDGYFSS 508

Query: 399 AAASDALIERDVKESYPLMSIL--DRRPIESALPSISRPIMSLDGNEDAI 542
           A +SD L+E+ +++S  +  +L    R +E  +PS  R  +  +   ++I
Sbjct: 509 AQSSDNLVEQKLRDSEAVFRVLTGTNRDLEMYVPSSRRAAIPPEVERESI 558

to top

>BRO1_EMENI (Q6XPR4) Vacuolar protein-sorting protein bro1 (BRO|
           domain-containing protein 1)
          Length = 1000

 Score = 43.9 bits (102), Expect = 3e-04
 Identities = 31/141 (21%), Positives = 63/141 (44%), Gaps = 1/141 (0%)
 Frame = +3

Query: 21  IIRTQAEKLQQSSEITRVRLKEMDLPDSILSLEGNVSIPADLKEDVEA-VQISGGPAGLE 197
           +IR + EK++ +       L    LP S+  L+G +     + E+ +   Q   G     
Sbjct: 391 LIRAETEKVETADGEMAASLDYFKLPGSLNILKGGMDQEVMVDEEFQRWCQELAGHDSFA 450

Query: 198 AELQQLRDLNRVNQELLVQTEEMLQKEASEDAQFRTQFGSRWTRPQSSTLTKNIQDRLNL 377
                L+D        L Q  + L  E S   + R+++G+ W++  SS L   +++ +  
Sbjct: 451 KAFDTLQDRKSEVLATLDQCAKQLDLEESVCEKMRSKYGADWSQQPSSRLNMTLRNDIRT 510

Query: 378 FAGNLKKAAASDALIERDVKE 440
           +   + +A+ASDA +   +++
Sbjct: 511 YRDTVHEASASDAQLSATLRQ 531

to top

>PALA_CANAL (Q9UW12) pH-response regulator protein palA/RIM20|
          Length = 785

 Score = 43.1 bits (100), Expect = 6e-04
 Identities = 33/131 (25%), Positives = 60/131 (45%), Gaps = 1/131 (0%)
 Frame = +3

Query: 78  LKEMDLPDSILSLEGNVSIPADLKEDVEAVQISGGPAGLEAELQQLRDLNRVNQELLVQT 257
           L + DLP SI S++   +IP  +    + +  +GG   ++   ++L  L      LL + 
Sbjct: 407 LIDRDLPSSIDSIQQPENIPDSVIHHSQEILKTGGVDFIDKAFKELDKLKLECNHLLQEC 466

Query: 258 EEMLQKEASEDAQFRTQFGS-RWTRPQSSTLTKNIQDRLNLFAGNLKKAAASDALIERDV 434
           E  +  + SED   R + GS RWTR  +    + +  +++     L +A   D  +   +
Sbjct: 467 ETRIDLDRSEDDMLRRKQGSTRWTRKSTDDAAQELIKKVDKMKQYLLQANNGDGFV---L 523

Query: 435 KESYPLMSILD 467
           K+ Y +   LD
Sbjct: 524 KKFYDIKPALD 534

to top

>PALA_YEAST (Q12033) pH-response regulator protein palA/RIM20 (Regulator of|
           IME2 protein 20)
          Length = 661

 Score = 42.0 bits (97), Expect = 0.001
 Identities = 42/134 (31%), Positives = 64/134 (47%), Gaps = 11/134 (8%)
 Frame = +3

Query: 144 LKEDVEAVQISGGPAGL-EAELQQLR-DLNRV---NQELLVQT---EEMLQKEASEDAQF 299
           LKE +   QI  G   + EAEL   +  LN +   N+ + VQ    E++L +EA  D Q 
Sbjct: 371 LKESLTTFQIPQGLTKVSEAELSHYQASLNNLLINNKNVQVQLDNIEQILNEEAFTDNQL 430

Query: 300 RTQFGS-RWTRPQSSTLTKNIQDRLNLFAGNLKKAAASDALIERDVKESYPLMSILDRRP 476
           R + G+  WT P+SST      ++L    G L + +A D       K++  L   +D+  
Sbjct: 431 RLKHGTLNWTLPESSTTNTAYYEKLKKLRGYLDEGSAID-------KQTNELFQSIDKNL 483

Query: 477 I--ESALPSISRPI 512
           I  E  LP  + P+
Sbjct: 484 IGSEIRLPESNDPL 497

to top

>BRO1_ASPFU (Q4X0Z5) Vacuolar protein-sorting protein bro1 (BRO|
           domain-containing protein 1)
          Length = 976

 Score = 41.6 bits (96), Expect = 0.002
 Identities = 31/135 (22%), Positives = 64/135 (47%), Gaps = 3/135 (2%)
 Frame = +3

Query: 21  IIRTQAEKLQQSSEITRVRLKEMDLPDSILSLEGNVSIPADLKEDVEAVQISGGPAGLEA 200
           +IR + EK++ +       L  + LP S+  L+G +    ++  D E  Q     AG ++
Sbjct: 372 LIRAETEKVETADSEMAASLDYLKLPGSLNILKGGMD--QEMTVDDEFRQWCQELAGHQS 429

Query: 201 ELQQLRDLNRVNQELLVQTE---EMLQKEASEDAQFRTQFGSRWTRPQSSTLTKNIQDRL 371
             +    L     E+L Q +   + L  E S   + R+++G+ W++  S+ L   ++  +
Sbjct: 430 FAKAFDTLQDRKGEILSQLDRCSKQLDLEESVCEKMRSKYGADWSQQPSARLNSTLRSDI 489

Query: 372 NLFAGNLKKAAASDA 416
             +   + +A+ASD+
Sbjct: 490 RTYRDTINEASASDS 504

to top

>RAD50_PYRHO (O58687) DNA double-strand break repair rad50 ATPase|
          Length = 879

 Score = 39.7 bits (91), Expect = 0.007
 Identities = 48/206 (23%), Positives = 95/206 (46%), Gaps = 13/206 (6%)
 Frame = +3

Query: 3   TEMVDDIIRTQAEKLQQ--------SSEITRVRLKEMDLPDSILSLEGNVSIPADLKEDV 158
           TE ++D+IRTQ +   +        SS + R+R +   + + + +LE   +   +LK  +
Sbjct: 191 TENIEDLIRTQEKSFTEVLNEIRNISSNLPRLRRELEGIKEEVKTLEATFNSITELK--L 248

Query: 159 EAVQISGGPAGLEAELQQLRDLNRVNQELLVQTEEMLQKEASEDAQFRTQFGSRWTRPQS 338
              +++G    LE  ++QL       ++   + EE++ KE  E  +  T++         
Sbjct: 249 RLGELNGKKGRLEERIRQLESGIEEKRKKSKELEEVV-KELPELEKKETEYRRLIEFKDE 307

Query: 339 STLTKN-IQDRLNLFAGNLKKAAASDALIERDVKESYPLMSILDRRPIESALPSISRPIM 515
             + KN ++ RL + +  L++       ++R +K++   ++ +  R IE  L  I   IM
Sbjct: 308 YLVKKNELEKRLGILSNRLQE-------VKRKIKDAESKVARI--RWIEERLKEIQEKIM 358

Query: 516 SLDGN----EDAIVGALKQSLRQLES 581
            L+      EDA+   LK  +  L+S
Sbjct: 359 KLEPRVREFEDAM--RLKAQMESLKS 382

to top

>BRO1_YARLI (Q6CGJ5) Vacuolar protein-sorting protein BRO1 (BRO|
           domain-containing protein 1)
          Length = 867

 Score = 39.3 bits (90), Expect = 0.009
 Identities = 28/153 (18%), Positives = 67/153 (43%), Gaps = 3/153 (1%)
 Frame = +3

Query: 21  IIRTQAEKLQQSSEITRVRLKEMDLPDSILSLEGNVSIPADLKEDVEAVQISGGPAGLEA 200
           ++R++ E+++ + +     L+ M LP  + +L+ ++    D     +   +  G A  E 
Sbjct: 397 LLRSEGERIEVADQKLNSALEYMGLPGELYALKKDLQSGRDSGSSAQVPAVVLGYAS-EV 455

Query: 201 ELQQLRDLNRVNQELLVQ---TEEMLQKEASEDAQFRTQFGSRWTRPQSSTLTKNIQDRL 371
           +   L  L     ++L Q   ++ ++  E +E  + +  +   WT+  S+ +  ++   +
Sbjct: 456 KTLDLSPLKTSRDQILTQIRDSQALIASEETESTKMKDYYKDGWTQAPSAQVNASLLSDI 515

Query: 372 NLFAGNLKKAAASDALIERDVKESYPLMSILDR 470
                +L  A ASD  ++       P + +L R
Sbjct: 516 RRVQESLVAAGASDEKLQAQYDGVKPDIELLSR 548

to top

>DMDA_DROME (Q9VDW6) Dystrophin, isoforms A/C/DLP1/DLP3|
          Length = 3497

 Score = 37.0 bits (84), Expect = 0.042
 Identities = 40/150 (26%), Positives = 65/150 (43%), Gaps = 14/150 (9%)
 Frame = +3

Query: 6    EMVDDIIRTQAEK---LQQSSEITRVRLKEMDLPDSILSLEGNV--SIPADLKEDVEAVQ 170
            + V+ + R + E+   LQ   ++ ++RLKE D    +  LE N   S  +D+    E  Q
Sbjct: 1038 DQVEQVHREKKEQQTVLQSHIDLIQLRLKETD--QWLTDLESNTPKSGISDIVNSNELFQ 1095

Query: 171  ISGGPAGL----EAELQQLRDLNRVNQELLVQTEEMLQKEASED----AQFRTQFGSRWT 326
                   L    E E  Q RDLN    ELL+Q +E+  ++        A+  T+  +RWT
Sbjct: 1096 SKSRFQTLKETCERETTQFRDLNERGGELLLQMDELQDQDRESRYGSLAKQFTRINARWT 1155

Query: 327  RPQSSTLTKN-IQDRLNLFAGNLKKAAASD 413
                    K  + + ++   G  KK   S+
Sbjct: 1156 EVTELVYAKTALLEHISTQLGEFKKFMVSE 1185

to top

>MRCKG_HUMAN (Q6DT37) Serine/threonine-protein kinase MRCK gamma (EC 2.7.11.1)|
           (CDC42-binding protein kinase gamma) (Myotonic dystrophy
           kinase-related CDC42-binding kinase gamma) (Myotonic
           dystrophy protein kinase-like alpha) (MRCK gamma)
           (DMPK-like gamma
          Length = 1551

 Score = 36.6 bits (83), Expect = 0.055
 Identities = 27/97 (27%), Positives = 54/97 (55%), Gaps = 7/97 (7%)
 Frame = +3

Query: 33  QAEKLQQSSEITRVRLKEMDLPDSILSLE-----GNVSIPADLKEDVEAV--QISGGPAG 191
           + E+L++  +  R RL EM    + LS       G+    +DL+++++ +  +++ G AG
Sbjct: 445 ELEQLRKEVQTLRDRLPEMLRDKASLSQTDGPPAGSPGQDSDLRQELDRLHRELAEGRAG 504

Query: 192 LEAELQQLRDLNRVNQELLVQTEEMLQKEASEDAQFR 302
           L+A+ Q+L       +ELL + +E  ++EA+  +Q R
Sbjct: 505 LQAQEQELCRAQGQQEELLQRLQEAQEREAATASQTR 541

to top

>CENPE_HUMAN (Q02224) Centromeric protein E (CENP-E protein)|
          Length = 2663

 Score = 36.2 bits (82), Expect = 0.072
 Identities = 35/127 (27%), Positives = 62/127 (48%), Gaps = 3/127 (2%)
 Frame = +3

Query: 6    EMVDDIIRTQAEKLQQSSEITRVRLKEMDLPDSILSLEGNVSIPADLKEDVEAVQISGGP 185
            E  +D ++ Q  K+Q+   I  + LKE    ++I  L G VS   D   +++   +    
Sbjct: 1759 EHSNDALKAQDLKIQEELRIAHMHLKEQQ--ETIDKLRGIVSEKTDKLSNMQK-DLENSN 1815

Query: 186  AGLEAELQQLRDLNRVNQELLVQTEEML---QKEASEDAQFRTQFGSRWTRPQSSTLTKN 356
            A L+ ++Q+L    + N+  L+  ++ +   QK+ SE  Q + Q      + QS TL+K 
Sbjct: 1816 AKLQEKIQEL----KANEHQLITLKKDVNETQKKVSEMEQLKKQI-----KDQSLTLSKL 1866

Query: 357  IQDRLNL 377
              + LNL
Sbjct: 1867 EIENLNL 1873

to top

>MYS3_HYDAT (P39922) Myosin heavy chain, clone 203 (Fragment)|
          Length = 539

 Score = 36.2 bits (82), Expect = 0.072
 Identities = 43/186 (23%), Positives = 78/186 (41%), Gaps = 2/186 (1%)
 Frame = +3

Query: 6   EMVDDIIRTQAEKLQQSSEITRVRLKEMDLPDSILSLEGNVSIPADL--KEDVEAVQISG 179
           E+  D+ + +  K++   E  +V     D  D +   E  +    DL  K +     +  
Sbjct: 236 EIEQDLKKEKDSKMKLEKEKKKVESDLKDNRDKLSETETRLKETQDLVTKREKSISDLEN 295

Query: 180 GPAGLEAELQQLRDLNRVNQELLVQTEEMLQKEASEDAQFRTQFGSRWTRPQSSTLTKNI 359
              GLE+++ QL+   R  QELL + EE L++E   + + R +  S   R +  +  + +
Sbjct: 296 AKEGLESQISQLQ---RKIQELLAKIEE-LEEELENERKLRQK--SELQRKELESRIEEL 349

Query: 360 QDRLNLFAGNLKKAAASDALIERDVKESYPLMSILDRRPIESALPSISRPIMSLDGNEDA 539
           QD+L    G      A+ A +E   K              E+    + + I +L+   DA
Sbjct: 350 QDQLETAGG------ATSAQVEVGKKR-------------EAECNRLRKEIEALNIANDA 390

Query: 540 IVGALK 557
            + A+K
Sbjct: 391 AISAIK 396

to top

>NIN_HUMAN (Q8N4C6) Ninein (hNinein)|
          Length = 2090

 Score = 35.8 bits (81), Expect = 0.094
 Identities = 37/161 (22%), Positives = 75/161 (46%), Gaps = 4/161 (2%)
 Frame = +3

Query: 18   DIIRTQAEKLQQSSEITRVRLKEMDLPDSILSLE-GNVS-IPADLKEDVEAVQISGGPAG 191
            +++R ++EKLQQ + I R  +  ++  DSI +L+ G ++    ++ +  E V+       
Sbjct: 1510 ELLRYESEKLQQENSILRNEITTLNEEDSISNLKLGTLNGSQEEMWQKTETVKQENAAVQ 1569

Query: 192  --LEAELQQLRDLNRVNQELLVQTEEMLQKEASEDAQFRTQFGSRWTRPQSSTLTKNIQD 365
              +E   +Q+ +L   NQ+L ++  E+ QK +                 Q+    + +  
Sbjct: 1570 KMVENLKKQISELKIKNQQLDLENTELSQKNS-----------------QNQEKLQELNQ 1612

Query: 366  RLNLFAGNLKKAAASDALIERDVKESYPLMSILDRRPIESA 488
            RL       +K   + AL ER+ +E + L   L+R  ++S+
Sbjct: 1613 RLTEMLCQKEKEPGNSALEERE-QEKFNLKEELERCKVQSS 1652

to top

>EFHD_DROME (Q9VJ26) EF-hand domain-containing protein CG10641 (Swiprosin|
           homolog)
          Length = 217

 Score = 35.4 bits (80), Expect = 0.12
 Identities = 21/56 (37%), Positives = 31/56 (55%)
 Frame = +3

Query: 153 DVEAVQISGGPAGLEAELQQLRDLNRVNQELLVQTEEMLQKEASEDAQFRTQFGSR 320
           DVE V +SG     EA+++Q    N+ + E+  + EE  ++E  E AQ R QF  R
Sbjct: 158 DVEQVGVSGAKNFFEAKIEQQLRTNKFHDEIRAEQEER-RREEEERAQRRQQFQQR 212

to top

>NIN_MOUSE (Q61043) Ninein|
          Length = 2035

 Score = 35.0 bits (79), Expect = 0.16
 Identities = 26/100 (26%), Positives = 50/100 (50%), Gaps = 4/100 (4%)
 Frame = +3

Query: 18   DIIRTQAEKLQQSSEITRVRLKEMDLPDSI--LSLEGNVSIPADLKEDVEAVQISGG--P 185
            +++R ++EKLQ+ + I R  +  ++  DSI  L LE       +L + +E ++       
Sbjct: 1500 ELLRYESEKLQEENSILRNEITTLNEEDSISNLKLEELNGSQEELWQKIETIEQEKASIQ 1559

Query: 186  AGLEAELQQLRDLNRVNQELLVQTEEMLQKEASEDAQFRT 305
              +E   +Q+ DL   NQ+L  +  E+ QK +    + +T
Sbjct: 1560 TMVEKLKKQVSDLKIKNQQLDSENIELSQKNSQNKEELKT 1599

to top

>ARHG6_MOUSE (Q8K4I3) Rho guanine nucleotide exchange factor 6 (Rac/Cdc42|
           guanine nucleotide exchange factor 6)
          Length = 771

 Score = 34.3 bits (77), Expect = 0.27
 Identities = 24/95 (25%), Positives = 54/95 (56%), Gaps = 2/95 (2%)
 Frame = +3

Query: 6   EMVDDIIRTQAEKL--QQSSEITRVRLKEMDLPDSILSLEGNVSIPADLKEDVEAVQISG 179
           + V  ++  + EKL  +++    +  ++E  L D++ +L+  V    +LK++ + ++   
Sbjct: 678 DSVPQVLLPEEEKLIIEETRSNGQTIIEEKSLVDTVYALKDEVK---ELKQENKKMKQC- 733

Query: 180 GPAGLEAELQQLRDLNRVNQELLVQTEEMLQKEAS 284
               LE EL+  +DL ++ ++LL QT+E ++ E+S
Sbjct: 734 ----LEEELKSRKDLEKLVRKLLKQTDECIRSESS 764

to top

>ARHG6_RAT (Q5XXR3) Rho guanine nucleotide exchange factor 6 (Rac/Cdc42|
           guanine nucleotide exchange factor 6)
          Length = 772

 Score = 33.9 bits (76), Expect = 0.36
 Identities = 24/95 (25%), Positives = 54/95 (56%), Gaps = 2/95 (2%)
 Frame = +3

Query: 6   EMVDDIIRTQAEKL--QQSSEITRVRLKEMDLPDSILSLEGNVSIPADLKEDVEAVQISG 179
           + V  ++  + EKL  +++    +  ++E  L D++ +L+  V    +LK++ + ++   
Sbjct: 679 DSVPQVLLPEEEKLIIEETRSNGQTIIEEKSLVDTVYALKDEVK---ELKQENKKMKQC- 734

Query: 180 GPAGLEAELQQLRDLNRVNQELLVQTEEMLQKEAS 284
               LE EL+  +DL ++ ++LL QT+E ++ E+S
Sbjct: 735 ----LEEELKSRKDLEKLVRKLLKQTDESIRAESS 765

to top

>ARHG6_HUMAN (Q15052) Rho guanine nucleotide exchange factor 6 (Rac/Cdc42|
           guanine nucleotide exchange factor 6) (PAK-interacting
           exchange factor alpha) (Alpha-Pix) (COOL-2)
          Length = 776

 Score = 33.5 bits (75), Expect = 0.47
 Identities = 24/95 (25%), Positives = 53/95 (55%), Gaps = 2/95 (2%)
 Frame = +3

Query: 6   EMVDDIIRTQAEKL--QQSSEITRVRLKEMDLPDSILSLEGNVSIPADLKEDVEAVQISG 179
           + +  ++  + EKL  +++    +  ++E  L D++ +L+  V    +LK++ + ++   
Sbjct: 683 DSIPQVLLPEEEKLIIEETRSNGQTIMEEKSLVDTVYALKDEVR---ELKQENKRMKQC- 738

Query: 180 GPAGLEAELQQLRDLNRVNQELLVQTEEMLQKEAS 284
               LE EL+  RDL ++ + LL QT+E ++ E+S
Sbjct: 739 ----LEEELKSRRDLEKLVRRLLKQTDECIRGESS 769

to top

>CL190_DROME (Q9VJE5) Restin homolog (Cytoplasmic linker protein 190)|
            (Microtubule-binding protein 190) (d-CLIP-190)
          Length = 1690

 Score = 33.1 bits (74), Expect = 0.61
 Identities = 22/91 (24%), Positives = 49/91 (53%), Gaps = 5/91 (5%)
 Frame = +3

Query: 15   DDIIRTQAEKLQQSSEITRVRLKEMDLPDSILSLEGNVSIPADLKEDV-----EAVQISG 179
            +++++   EK+++SS I  +  +   L +S + LE   S   + ++ +     +  Q+  
Sbjct: 1237 EELVQNLEEKVRESSSI--IEAQNTKLNESNVQLENKTSCLKETQDQLLESQKKEKQLQE 1294

Query: 180  GPAGLEAELQQLRDLNRVNQELLVQTEEMLQ 272
              A L  ELQQ+++ N   ++ LV+ EE+++
Sbjct: 1295 EAAKLSGELQQVQEANGDIKDSLVKVEELVK 1325

to top

>MRIP_MOUSE (P97434) Myosin phosphatase Rho-interacting protein|
           (Rho-interacting protein 3) (p116Rip) (RIP3)
          Length = 1024

 Score = 32.0 bits (71), Expect = 1.4
 Identities = 17/38 (44%), Positives = 22/38 (57%)
 Frame = +3

Query: 192 LEAELQQLRDLNRVNQELLVQTEEMLQKEASEDAQFRT 305
           LEAE Q LR   R NQEL    +E+  + A+E  + RT
Sbjct: 840 LEAERQALRQCQRENQELNAHNQELNNRLAAEITRLRT 877

to top

>MRIP_HUMAN (Q6WCQ1) Myosin phosphatase Rho-interacting protein|
           (Rho-interacting protein 3) (M-RIP) (RIP3) (p116Rip)
          Length = 1024

 Score = 32.0 bits (71), Expect = 1.4
 Identities = 17/38 (44%), Positives = 22/38 (57%)
 Frame = +3

Query: 192 LEAELQQLRDLNRVNQELLVQTEEMLQKEASEDAQFRT 305
           LEAE Q LR   R NQEL    +E+  + A+E  + RT
Sbjct: 840 LEAERQALRQCQRENQELNAHNQELNNRLAAEITRLRT 877

to top

>MRIP_RAT (Q9ERE6) Myosin phosphatase Rho-interacting protein|
           (Rho-interacting protein 3) (p116Rip) (RIP3)
          Length = 1029

 Score = 32.0 bits (71), Expect = 1.4
 Identities = 17/38 (44%), Positives = 22/38 (57%)
 Frame = +3

Query: 192 LEAELQQLRDLNRVNQELLVQTEEMLQKEASEDAQFRT 305
           LEAE Q LR   R NQEL    +E+  + A+E  + RT
Sbjct: 845 LEAERQALRQCQRENQELNAHNQELNNRLAAEITRLRT 882

to top

>CING_MOUSE (P59242) Cingulin|
          Length = 1191

 Score = 31.6 bits (70), Expect = 1.8
 Identities = 21/58 (36%), Positives = 33/58 (56%), Gaps = 10/58 (17%)
 Frame = +3

Query: 159  EAVQISGGPAGLEAELQQL----------RDLNRVNQELLVQTEEMLQKEASEDAQFR 302
            EA + SGG + L+ ELQ+L          RD  R+++ELL Q  + L++EA    +F+
Sbjct: 888  EAEKNSGGLSRLQDELQRLRQALQTSQAERDTARLDKELLAQRLQGLEQEAENKKRFQ 945

to top

>SAS6_MOUSE (Q80UK7) Spindle assembly abnormal protein 6 homolog|
          Length = 654

 Score = 31.2 bits (69), Expect = 2.3
 Identities = 25/95 (26%), Positives = 45/95 (47%)
 Frame = +3

Query: 3   TEMVDDIIRTQAEKLQQSSEITRVRLKEMDLPDSILSLEGNVSIPADLKEDVEAVQISGG 182
           T+   D I+ Q   L+++ E  +++L +++     LS E        LK +    ++ G 
Sbjct: 341 TKEAFDTIQEQKVALEENGEKNQIQLGKLEATIKSLSAEL-------LKANEIIKKLQGD 393

Query: 183 PAGLEAELQQLRDLNRVNQELLVQTEEMLQKEASE 287
              L  +L+    +    ++LL + EEMLQKE  E
Sbjct: 394 LKTLMGKLKLKNTVTIQQEKLLAEKEEMLQKERKE 428

to top

>GUAAA_PICTO (Q6KZC5) GMP synthase [glutamine-hydrolyzing] subunit A (EC|
           6.3.5.2) (Glutamine amidotransferase)
          Length = 188

 Score = 31.2 bits (69), Expect = 2.3
 Identities = 11/32 (34%), Positives = 23/32 (71%)
 Frame = +3

Query: 129 SIPADLKEDVEAVQISGGPAGLEAELQQLRDL 224
           ++ AD+  D + + +SGGPA +E+E+ +L ++
Sbjct: 33  TVDADVLADADGIILSGGPASIESEISKLGNI 64

to top

>SAS6_BRARE (Q7ZVT3) Spindle assembly abnormal protein 6 homolog|
          Length = 627

 Score = 31.2 bits (69), Expect = 2.3
 Identities = 31/137 (22%), Positives = 58/137 (42%), Gaps = 6/137 (4%)
 Frame = +3

Query: 186 AGLEAELQQLRDLNRVNQELLVQTEEMLQKEASEDAQFRTQFGSRWTRPQSSTLTKNIQD 365
           + ++ E QQL+   R  +E L +     Q+  SE ++   +  S WT   +S  ++++QD
Sbjct: 158 SSVKEEKQQLQQKLRKTEEDLTRQLNYAQQTLSEKSRELDKLRSEWTSQTTSLSSRHMQD 217

Query: 366 RLNLFAGNLKKAAASDALIE------RDVKESYPLMSILDRRPIESALPSISRPIMSLDG 527
                    +KA  + + ++      R   ES    S    +   S L + +R ++    
Sbjct: 218 ----LTAEREKALETQSRLQQQNEQLRQELESSHHRSTQQLQTKVSELETANRELIDKKY 273

Query: 528 NEDAIVGALKQSLRQLE 578
             D+ +  LK  L  LE
Sbjct: 274 KSDSTIRDLKAKLTSLE 290

to top

>BRO1_USTMA (Q4PHA8) Vacuolar protein-sorting protein BRO1 (BRO|
           domain-containing protein 1)
          Length = 1076

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 22/106 (20%), Positives = 51/106 (48%), Gaps = 3/106 (2%)
 Frame = +3

Query: 180 GPAGLEAELQQLRDLNRVNQELLVQTEEMLQKEASEDAQFRTQFGSRWTRPQSSTLTKNI 359
           G  G+++ LQ++  +       +      L  E  E  + R +FG +W++  +   TK++
Sbjct: 474 GATGVDSALQRIESIKSQAANDIDAALAALDDENRECEKQRVRFGHKWSQDPAGLHTKDM 533

Query: 360 QDRLNLFAGNLKKAAASDALIE---RDVKESYPLMSILDRRPIESA 488
           +  L      +++A+ +DA I    + +++   L+ +  R  +E+A
Sbjct: 534 RVNLKENKEAMQQASQNDAQIGGLWKSIRQDVQLL-VSGREALEAA 578

to top

>MACOI_RAT (Q4V7D3) Macoilin (Transmembrane protein 57)|
          Length = 664

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 21/80 (26%), Positives = 39/80 (48%), Gaps = 9/80 (11%)
 Frame = +3

Query: 84  EMDLPDSILSLEGNVS-IPADLKEDVEAVQ--------ISGGPAGLEAELQQLRDLNRVN 236
           ++  PD+++ LE ++  + ADL+   +  Q        +S    G+ +E+ QLR  N + 
Sbjct: 376 QLSKPDALVRLEQDIKKLKADLQASRQVEQELRSQISSLSSTERGIRSEMGQLRQENELL 435

Query: 237 QELLVQTEEMLQKEASEDAQ 296
           Q  L    +M QK+    +Q
Sbjct: 436 QNKLHNAVQMKQKDKQNISQ 455

to top

>MACOI_PIG (Q2TLZ2) Macoilin (Transmembrane protein 57)|
          Length = 664

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 21/80 (26%), Positives = 39/80 (48%), Gaps = 9/80 (11%)
 Frame = +3

Query: 84  EMDLPDSILSLEGNVS-IPADLKEDVEAVQ--------ISGGPAGLEAELQQLRDLNRVN 236
           ++  PD+++ LE ++  + ADL+   +  Q        +S    G+ +E+ QLR  N + 
Sbjct: 376 QLSKPDALVRLEQDIKKLKADLQASRQVEQELRSQISSLSSTERGIRSEMGQLRQENELL 435

Query: 237 QELLVQTEEMLQKEASEDAQ 296
           Q  L    +M QK+    +Q
Sbjct: 436 QNKLHNAVQMKQKDKQNISQ 455

to top

>MACOI_PANTR (Q2TLZ5) Macoilin (Transmembrane protein 57)|
          Length = 664

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 21/80 (26%), Positives = 39/80 (48%), Gaps = 9/80 (11%)
 Frame = +3

Query: 84  EMDLPDSILSLEGNVS-IPADLKEDVEAVQ--------ISGGPAGLEAELQQLRDLNRVN 236
           ++  PD+++ LE ++  + ADL+   +  Q        +S    G+ +E+ QLR  N + 
Sbjct: 376 QLSKPDALVRLEQDIKKLKADLQASRQVEQELRSQISSLSSTERGIRSEMGQLRQENELL 435

Query: 237 QELLVQTEEMLQKEASEDAQ 296
           Q  L    +M QK+    +Q
Sbjct: 436 QNKLHNAVQMKQKDKQNISQ 455

to top

>MACOI_MOUSE (Q7TQE6) Macoilin (Transmembrane protein 57) (Brain-specific|
           adaptor protein C61)
          Length = 664

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 21/80 (26%), Positives = 39/80 (48%), Gaps = 9/80 (11%)
 Frame = +3

Query: 84  EMDLPDSILSLEGNVS-IPADLKEDVEAVQ--------ISGGPAGLEAELQQLRDLNRVN 236
           ++  PD+++ LE ++  + ADL+   +  Q        +S    G+ +E+ QLR  N + 
Sbjct: 376 QLSKPDALVRLEQDIKKLKADLQASRQVEQELRSQISALSSTERGIRSEMGQLRQENELL 435

Query: 237 QELLVQTEEMLQKEASEDAQ 296
           Q  L    +M QK+    +Q
Sbjct: 436 QNKLHNAVQMKQKDKQNISQ 455

to top

>MACOI_HUMAN (Q8N5G2) Macoilin (Transmembrane protein 57)|
          Length = 664

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 21/80 (26%), Positives = 39/80 (48%), Gaps = 9/80 (11%)
 Frame = +3

Query: 84  EMDLPDSILSLEGNVS-IPADLKEDVEAVQ--------ISGGPAGLEAELQQLRDLNRVN 236
           ++  PD+++ LE ++  + ADL+   +  Q        +S    G+ +E+ QLR  N + 
Sbjct: 376 QLSKPDALVRLEQDIKKLKADLQASRQVEQELRSQISSLSSTERGIRSEMGQLRQENELL 435

Query: 237 QELLVQTEEMLQKEASEDAQ 296
           Q  L    +M QK+    +Q
Sbjct: 436 QNKLHNAVQMKQKDKQNISQ 455

to top

>MACOI_CANFA (Q2TLZ1) Macoilin (Transmembrane protein 57)|
          Length = 664

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 21/80 (26%), Positives = 39/80 (48%), Gaps = 9/80 (11%)
 Frame = +3

Query: 84  EMDLPDSILSLEGNVS-IPADLKEDVEAVQ--------ISGGPAGLEAELQQLRDLNRVN 236
           ++  PD+++ LE ++  + ADL+   +  Q        +S    G+ +E+ QLR  N + 
Sbjct: 376 QLSKPDALVRLEQDIKKLKADLQASRQVEQELRSQISSLSSTERGIRSEMGQLRQENELL 435

Query: 237 QELLVQTEEMLQKEASEDAQ 296
           Q  L    +M QK+    +Q
Sbjct: 436 QNKLHNAVQMKQKDKQNISQ 455

to top

>MACOI_BOVIN (Q2TLZ3) Macoilin (Transmembrane protein 57)|
          Length = 664

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 21/80 (26%), Positives = 39/80 (48%), Gaps = 9/80 (11%)
 Frame = +3

Query: 84  EMDLPDSILSLEGNVS-IPADLKEDVEAVQ--------ISGGPAGLEAELQQLRDLNRVN 236
           ++  PD+++ LE ++  + ADL+   +  Q        +S    G+ +E+ QLR  N + 
Sbjct: 376 QLSKPDALVRLEQDIKKLKADLQASRQVEQELRSQISSLSSTERGIRSEMGQLRQENELL 435

Query: 237 QELLVQTEEMLQKEASEDAQ 296
           Q  L    +M QK+    +Q
Sbjct: 436 QNKLHNAVQMKQKDKQNISQ 455

to top

>BIOH_XANOR (Q5H6D1) Carboxylesterase bioH (EC 3.1.1.1) (Biotin synthesis|
           protein bioH)
          Length = 253

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 23/86 (26%), Positives = 39/86 (45%), Gaps = 4/86 (4%)
 Frame = +3

Query: 306 QFGSRWTRPQSSTLTKNIQ-DRLNLFAGNLKKAAASDALIERDVKESYPL---MSILDRR 473
           QFG+  +R    TL + +  D L       +  +  + L  R       L   +S+L+R 
Sbjct: 123 QFGTELSRDYRGTLERFLALDTLGSAHARSELRSLRETLTARGEPAPEALQQGLSLLERT 182

Query: 474 PIESALPSISRPIMSLDGNEDAIVGA 551
            +  ALP ++RP + + G  D +V A
Sbjct: 183 DLRRALPQLARPSLWIAGQRDRLVPA 208

to top

>TRI55_RAT (Q5PQN5) Tripartite motif-containing 63 (Muscle-specific RING|
           finger protein 2) (MuRF2) (MURF-2) (RING finger protein
           29)
          Length = 545

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 37/166 (22%), Positives = 65/166 (39%), Gaps = 14/166 (8%)
 Frame = +3

Query: 3   TEMVDDIIRTQAEK--------------LQQSSEITRVRLKEMDLPDSILSLEGNVSIPA 140
           TEM   I RTQ EK              L+  S++    ++ MD P+  + L+   ++  
Sbjct: 227 TEMTQAITRTQEEKLEHVRTLIRKYSDHLENVSKLVESGIQFMDEPEMAVFLQNAKTLLQ 286

Query: 141 DLKEDVEAVQISGGPAGLEAELQQLRDLNRVNQELLVQTEEMLQKEASEDAQFRTQFGSR 320
            + E  +A Q+     G E       +LNR  +E +++  +  ++E  ED +        
Sbjct: 287 KITEASKAFQMEKIEQGYEIMNNFTVNLNR--EEKIIREIDFSREEEDEDDEGEVDEEGE 344

Query: 321 WTRPQSSTLTKNIQDRLNLFAGNLKKAAASDALIERDVKESYPLMS 458
                     +N+Q   +     L+KAA    L       S PL++
Sbjct: 345 GEDAVEVEEAENVQVASSGEEETLEKAAEPSELAAEIQAASGPLLA 390

to top

>DMN_HUMAN (O15061) Desmuslin|
          Length = 1565

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 21/78 (26%), Positives = 36/78 (46%), Gaps = 10/78 (12%)
 Frame = +3

Query: 15  DDIIRTQAEKLQQSSEITRVRLKEMDLPDSILSLEGNVSIPADLKEDVEA---------- 164
           +++ +   E  Q+ S+  + + KE D P      E  V I  ++ +D  A          
Sbjct: 540 EELTKLDKEARQRESQQMKEKAKEKDSPKEKSVREREVPISLEVSQDRRAEVSPKGLQTP 599

Query: 165 VQISGGPAGLEAELQQLR 218
           V+ +GG  G EAE ++LR
Sbjct: 600 VKDAGGGTGREAEARELR 617

to top

>NF2L1_MOUSE (Q61985) Nuclear factor erythroid 2-related factor 1 (NF-E2-related|
           factor 1) (NFE2-related factor 1) (Nuclear factor,
           erythroid derived 2, like 1)
          Length = 741

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 27/97 (27%), Positives = 47/97 (48%), Gaps = 11/97 (11%)
 Frame = +3

Query: 327 RPQSSTLTKNIQD---RLNLFAGNLKKAAASDALIERDVKESYP------LMSILDRRPI 479
           R +   + K +QD   R + ++G   +A A D L++ +  ES+P      + SI +  P 
Sbjct: 197 RQKEQDVDKELQDGREREDTWSGEGAEALARDLLVDGETGESFPAQFPADVSSIPEAVPS 256

Query: 480 ESALPSISRPIMS--LDGNEDAIVGALKQSLRQLESL 584
           ES  P++   ++S  L G E      L+Q  + L S+
Sbjct: 257 ESESPALQNSLLSPLLTGTESPF--DLEQQWQDLMSI 291

to top

>BCSC_ECO57 (Q8X5M0) Cellulose synthase operon protein C|
          Length = 1137

 Score = 30.0 bits (66), Expect = 5.2
 Identities = 29/138 (21%), Positives = 56/138 (40%), Gaps = 7/138 (5%)
 Frame = +3

Query: 180 GPAGLEAELQQLRDLNRVNQELLVQTEEMLQKEASEDAQFRTQFGSRWTRPQSSTLTKNI 359
           G  GL+  L  L   +    E     E+M +  A  +   +  +G     P S      +
Sbjct: 159 GNTGLQNNLALLLFSSDRRDEGFAVLEQMAKSNAGREGASKIWYGQIKDMPVSDASVSAL 218

Query: 360 QDRLNLFAGNLKKAAASDALIERDVKESYPL-------MSILDRRPIESALPSISRPIMS 518
           +  L++F+     AAA   L E+  + + P        ++ +D      A+P + + + +
Sbjct: 219 KKYLSIFSDGDSVAAAQSQLAEQQKQLADPAFRARAQGLAAVDSGMAGKAIPELQQAVRA 278

Query: 519 LDGNEDAIVGALKQSLRQ 572
              + +A+ GAL Q+  Q
Sbjct: 279 NPKDSEAL-GALGQAYSQ 295

to top

>MACOI_MACMU (Q2TLZ4) Macoilin (Transmembrane protein 57)|
          Length = 664

 Score = 30.0 bits (66), Expect = 5.2
 Identities = 21/80 (26%), Positives = 39/80 (48%), Gaps = 9/80 (11%)
 Frame = +3

Query: 84  EMDLPDSILSLEGNVS-IPADLKEDVEAVQ--------ISGGPAGLEAELQQLRDLNRVN 236
           ++  PD+++ LE ++  + ADL+   +  Q        +S    G+ +E+ QLR  N + 
Sbjct: 376 QLSKPDALVRLEQDIKKLKADLQASRQVEQELRSQISSLSSTERGIRSEMGQLRQENELL 435

Query: 237 QELLVQTEEMLQKEASEDAQ 296
           Q  L    +M QK+    +Q
Sbjct: 436 QNKLHNAVQMKQKDKHNISQ 455

to top

>RPOC_CHLCH (Q3ATP4) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP|
            beta' subunit) (Transcriptase beta' chain) (RNA
            polymerase beta' subunit)
          Length = 1502

 Score = 30.0 bits (66), Expect = 5.2
 Identities = 20/82 (24%), Positives = 41/82 (50%), Gaps = 5/82 (6%)
 Frame = +3

Query: 63   ITRVRLKEMD----LPDSILSLEGNVSIPADLKEDVEAVQISGGPAGL-EAELQQLRDLN 227
            + +VR++E      LP  ++     +     + E V   +    PA + E +L +LRD+ 
Sbjct: 1318 LQKVRIEEPGDTDLLPGDLIDRSAFIEANRAISEKVRISERGDAPARIQENQLHKLRDIT 1377

Query: 228  RVNQELLVQTEEMLQKEASEDA 293
            ++N+EL   +++M+  E +  A
Sbjct: 1378 KLNRELRKNSKKMVAYEPALQA 1399

to top

>CCD41_HUMAN (Q9Y592) Coiled-coil domain-containing protein 41 (NY-REN-58|
           antigen)
          Length = 693

 Score = 30.0 bits (66), Expect = 5.2
 Identities = 31/110 (28%), Positives = 49/110 (44%), Gaps = 5/110 (4%)
 Frame = +3

Query: 48  QQSSEITR-----VRLKEMDLPDSILSLEGNVSIPADLKEDVEAVQISGGPAGLEAELQQ 212
           Q + EITR     VRLK      +I + E   +  +DLK+ + ++QI      + +  Q 
Sbjct: 426 QMAEEITRKELQSVRLKLQQQIVTIENAEKEKNENSDLKQQISSLQIQ-----VTSLAQS 480

Query: 213 LRDLNRVNQELLVQTEEMLQKEASEDAQFRTQFGSRWTRPQSSTLTKNIQ 362
             DL   NQ L    +EM+++   E   FR+Q        + +   K IQ
Sbjct: 481 ENDLLNSNQML----KEMVERLKQECRNFRSQAEKAQLEAEKTLEEKQIQ 526

to top

>YFI6_YEAST (P43597) Hypothetical 137.7 kDa protein in UGS1-FAB1 intergenic|
            region
          Length = 1233

 Score = 30.0 bits (66), Expect = 5.2
 Identities = 23/91 (25%), Positives = 46/91 (50%), Gaps = 4/91 (4%)
 Frame = +3

Query: 39   EKLQQSSEITRVRLKEMDLPDSILSLEGNVSIPADLK--EDVEAVQISGGPAGLEA--EL 206
            E   ++S+ + V   E  +  S  S++ +    A+++  E  E +++      L+A  E 
Sbjct: 785  EAASENSKASDVGTAEKYIEPSSESVKKDTEEDAEVENSEKTEFIKVKAELENLDAPKEA 844

Query: 207  QQLRDLNRVNQELLVQTEEMLQKEASEDAQF 299
            +   +LN+ N+++ V TEE  + E SE  +F
Sbjct: 845  EVTAELNKENEDVEVDTEEDAEVENSEKTEF 875

to top

>MYS9_DROME (Q01989) Myosin heavy chain 95F (95F MHC) (Jaguar protein)|
          Length = 1256

 Score = 30.0 bits (66), Expect = 5.2
 Identities = 31/145 (21%), Positives = 65/145 (44%), Gaps = 2/145 (1%)
 Frame = +3

Query: 12   VDDIIRTQAEKLQQSSEITRVRLKEMDLPDSILSLEGNVSIPADLKEDVEAVQISGGPAG 191
            V+DI R   + +++     R+  +EMD   +++    N  +  DL   ++  Q +     
Sbjct: 869  VNDIYRQIDDAIKKIKMNPRITQREMDSMYTVVMANMN-KLTVDLNTKLKEQQQAEEQER 927

Query: 192  LEAELQQLRDLNRVNQELLVQTEEMLQKEASEDAQFRTQFGSRWTRPQSSTLTKNIQDRL 371
            L  ++Q+  +  R  +E     EE  Q+E  E+ + + +  +R    ++  L +  +DR 
Sbjct: 928  LR-KIQEALEAERAAKE----AEEQRQREEIENKRLKAEMETRRKAAEAQRLRQEEEDRR 982

Query: 372  NLFA--GNLKKAAASDALIERDVKE 440
               A    L+K A  DA   + +++
Sbjct: 983  AALALQEQLEKEAKDDAKYRQQLEQ 1007

to top

>MRCKB_HUMAN (Q9Y5S2) Serine/threonine-protein kinase MRCK beta (EC 2.7.11.1)|
           (CDC42-binding protein kinase beta) (Myotonic dystrophy
           kinase-related CDC42-binding kinase beta) (Myotonic
           dystrophy protein kinase-like beta) (MRCK beta)
           (DMPK-like beta)
          Length = 1711

 Score = 30.0 bits (66), Expect = 5.2
 Identities = 14/51 (27%), Positives = 32/51 (62%), Gaps = 4/51 (7%)
 Frame = +3

Query: 144 LKEDVEAVQISGGPAGLEAELQQLRDLNRVNQEL----LVQTEEMLQKEAS 284
           ++ ++EA+++  G  G  A L+  ++++++  EL    L   EE++++EAS
Sbjct: 657 MESELEALKVKQGGRGAGATLEHQQEISKIKSELEKKVLFYEEELVRREAS 707

to top

>BCSC_ECOLI (P37650) Cellulose synthase operon protein C|
          Length = 1140

 Score = 30.0 bits (66), Expect = 5.2
 Identities = 29/138 (21%), Positives = 56/138 (40%), Gaps = 7/138 (5%)
 Frame = +3

Query: 180 GPAGLEAELQQLRDLNRVNQELLVQTEEMLQKEASEDAQFRTQFGSRWTRPQSSTLTKNI 359
           G  GL+  L  L   +    E     E+M +  A  +   +  +G     P S      +
Sbjct: 162 GNTGLQNNLALLLFSSDRRDEGFAVLEQMAKSNAGREGASKIWYGQIKDMPVSDASVSAL 221

Query: 360 QDRLNLFAGNLKKAAASDALIERDVKESYPL-------MSILDRRPIESALPSISRPIMS 518
           +  L++F+     AAA   L E+  + + P        ++ +D      A+P + + + +
Sbjct: 222 KKYLSIFSDGDSVAAAQSQLAEQQKQLADPAFRARAQGLAAVDSGMAGKAIPELQQAVRA 281

Query: 519 LDGNEDAIVGALKQSLRQ 572
              + +A+ GAL Q+  Q
Sbjct: 282 NPKDSEAL-GALGQAYSQ 298

to top

>LTI78_ARATH (Q06738) Low-temperature-induced 78 kDa protein|
           (Desiccation-responsive protein 29A)
          Length = 710

 Score = 29.6 bits (65), Expect = 6.7
 Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
 Frame = +3

Query: 315 SRWTRPQSSTLTKNIQDRLNLFAGNLKKAAASDALIERDVKESYPLMSILDRRPI-ESAL 491
           S +T+P  S   +      +  A +++    SD   +RDV   +PL  + DR    E+  
Sbjct: 107 SDYTKPTESVPVQEASYGHDAPAHSVRTTFTSDKEEKRDVPIHHPLSELSDREESRETHH 166

Query: 492 PSISRPIMSLDGNED 536
            S++ P+  L G ED
Sbjct: 167 ESLNTPVSLLSGTED 181

to top

>DXR_CLOTE (Q895K5) 1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC|
           1.1.1.267) (DXP reductoisomerase)
           (1-deoxyxylulose-5-phosphate reductoisomerase)
           (2-C-methyl-D-erythritol 4-phosphate synthase)
          Length = 384

 Score = 29.3 bits (64), Expect = 8.8
 Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
 Frame = +3

Query: 105 ILSLEGNVSIPADLKEDVEAVQISGGPAGLEAELQQLR---DLNRVNQELLVQTEEMLQK 275
           +  +EG  +I +  K D+    + G   GLE  L+ +R   D+   N+E LV   E+++K
Sbjct: 79  LYGIEGMNTIASLDKVDIVLTSVVG-MIGLEPTLKAIRNKKDIALANKETLVVAGEIIKK 137

Query: 276 EASED 290
           EA E+
Sbjct: 138 EAHEN 142

to top

>CLPC_CHLPN (Q9Z8A6) Probable ATP-dependent Clp protease ATP-binding subunit|
          Length = 845

 Score = 29.3 bits (64), Expect = 8.8
 Identities = 30/111 (27%), Positives = 46/111 (41%), Gaps = 1/111 (0%)
 Frame = +3

Query: 69  RVRLKEMDLPDSILSLEGNVSIPADLKEDVEAVQISGGPAGLEAELQQLRD-LNRVNQEL 245
           RVR+  M  P  ++ LE  +      KE     Q     AGL  E ++LR+ L  + QE 
Sbjct: 425 RVRVNTMGQPTDLMKLEAEIENTKLAKEQAIGTQEYEKAAGLRDEEKKLRERLQSMKQEW 484

Query: 246 LVQTEEMLQKEASEDAQFRTQFGSRWTRPQSSTLTKNIQDRLNLFAGNLKK 398
               EE    +   D +   Q  S  T   S+ LT+   ++L      L++
Sbjct: 485 ENHKEE---HQVPVDEEAVAQVVSLQTGIPSARLTEAESEKLLKLEDTLRR 532

to top

>CING_HUMAN (Q9P2M7) Cingulin|
          Length = 1197

 Score = 29.3 bits (64), Expect = 8.8
 Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 10/51 (19%)
 Frame = +3

Query: 159  EAVQISGGPAGLEAELQQL----------RDLNRVNQELLVQTEEMLQKEA 281
            EA + SGG + L+ E+Q+L          RD  R+++ELL Q  + L++EA
Sbjct: 894  EAEKTSGGLSRLQDEIQRLRQALQASQAERDTARLDKELLAQRLQGLEQEA 944

to top

>YQFQ_BACSU (P54474) Hypothetical protein yqfQ|
          Length = 247

 Score = 29.3 bits (64), Expect = 8.8
 Identities = 29/119 (24%), Positives = 53/119 (44%), Gaps = 15/119 (12%)
 Frame = +3

Query: 96  PDSILSLEGNVSIPADLKEDVEAVQISGGPA--GLEAELQQLRDLNR-------VNQELL 248
           P S+ S+ GNV     + + V  +    GP    L A ++    L++        N+E  
Sbjct: 113 PASLSSMLGNVQKVLGMAQQVTPMIQQYGPLVRNLPAMMKLYSQLSKSDDTETEANEESE 172

Query: 249 VQTEEMLQKEASEDAQFRTQFGSRWTRPQSSTL------TKNIQDRLNLFAGNLKKAAA 407
            Q+      E  ++ + +T  G++ ++P+SS+L      T N +  L   A   K+AA+
Sbjct: 173 KQSVSEESSEKEKETETKTSDGNKKSKPKSSSLPKKSKTTDNKEQELKTSAPKKKEAAS 231

to top

>MFP1_ARATH (Q9LW85) MAR binding filament-like protein 1|
          Length = 726

 Score = 29.3 bits (64), Expect = 8.8
 Identities = 41/167 (24%), Positives = 70/167 (41%), Gaps = 18/167 (10%)
 Frame = +3

Query: 24  IRTQAEKLQQSSEITRVRLKE-MDLPDSILSLEGNVSIPADLKEDVEAVQ-ISGGPAGLE 197
           +     K  +  E    +L+E +DL + +      +S+  +LK+  E  Q  +   A  E
Sbjct: 239 LENSLSKAGEDKEALETKLREKLDLVEGLQDRINLLSL--ELKDSEEKAQRFNASLAKKE 296

Query: 198 AELQQL--------RDLNRVNQELLVQTEEMLQKEASEDA------QFRTQFGSRWTRPQ 335
           AEL++L        RDL     E+  Q EE+++ ++  D+      +  T+  +     +
Sbjct: 297 AELKELNSIYTQTSRDLAEAKLEIKQQKEELIRTQSELDSKNSAIEELNTRITTLVAEKE 356

Query: 336 S--STLTKNIQDRLNLFAGNLKKAAASDALIERDVKESYPLMSILDR 470
           S    L    +D   L   +  +AAA   LI R  +E   L   LDR
Sbjct: 357 SYIQKLDSISKDYSALKLTSETQAAADAELISRKEQEIQQLNENLDR 403

to top

>LBN_MOUSE (Q8K1G2) Limbin|
          Length = 1220

 Score = 29.3 bits (64), Expect = 8.8
 Identities = 28/107 (26%), Positives = 49/107 (45%)
 Frame = +3

Query: 15   DDIIRTQAEKLQQSSEITRVRLKEMDLPDSILSLEGNVSIPADLKEDVEAVQISGGPAGL 194
            + ++  Q +K+ +++E   V    + + D +L   G +S    L +    VQI       
Sbjct: 873  ESLVALQFQKVARAAETLSVYTALLSIQDLLL---GELSESETLTKSA-CVQILESH--- 925

Query: 195  EAELQQLRDLNRVNQELLVQTEEMLQKEASEDAQFRTQFGSRWTRPQ 335
              ELQ+L++L R  ++ LVQ EE  Q+   E  Q     G   + P+
Sbjct: 926  RPELQELQELERKLEDQLVQQEEAEQQRVLESWQRWAADGPGLSEPE 972

to top

>NUP62_RAT (P17955) Nuclear pore glycoprotein p62 (62 kDa nucleoporin)|
          Length = 525

 Score = 29.3 bits (64), Expect = 8.8
 Identities = 16/52 (30%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
 Frame = +3

Query: 141 DLKEDVEAVQISGGPAGLEAELQQLRDLNRVNQELLV---QTEEMLQKEASE 287
           DLK+ +E + ++GGPA     LQQ+  +   + + L    Q+  +LQ+   E
Sbjct: 453 DLKDIIEHLNMAGGPADTSDPLQQICKILNAHMDSLQWVDQSSALLQRRVEE 504

to top

>NUP62_MOUSE (Q63850) Nuclear pore glycoprotein p62 (62 kDa nucleoporin)|
          Length = 526

 Score = 29.3 bits (64), Expect = 8.8
 Identities = 16/52 (30%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
 Frame = +3

Query: 141 DLKEDVEAVQISGGPAGLEAELQQLRDLNRVNQELLV---QTEEMLQKEASE 287
           DLK+ +E + ++GGPA     LQQ+  +   + + L    Q+  +LQ+   E
Sbjct: 454 DLKDIIEHLNMAGGPADTSDPLQQICKILNAHMDSLQWVDQSSALLQRRVEE 505


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 77,121,915
Number of Sequences: 219361
Number of extensions: 1453797
Number of successful extensions: 4778
Number of sequences better than 10.0: 62
Number of HSP's better than 10.0 without gapping: 4648
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4774
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 5101629520
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

to top

full-length cDNA and EST

Clone Information

BLAST Search Result