| Clone Name | baal23c12 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_197157.1| Oryza sativa (japonica cultivar-group) putative signal tranduction protein (OSJNBa0041P03.2), mRNA Length = 2871 Score = 583 bits (294), Expect = e-163 Identities = 507/578 (87%) Strand = Plus / Plus Query: 6 gagatggtagatgatatcattcggacccaggcagagaaacttcagcaatctagtgagatc 65 |||||||||||| | ||||| |||| || || |||||| | |||||| ||||||||||| Sbjct: 1153 gagatggtagataacatcatcaggactcaagcggagaaattacagcaagctagtgagatc 1212 Query: 66 actagggttaggctgaaggaaatggacttgcctgattctattctatcattggaaggtaat 125 ||||| |||||| ||||||||||||||||||| ||||| ||||| ||||| ||||||||| Sbjct: 1213 actagagttaggttgaaggaaatggacttgcccgattccattctttcattagaaggtaat 1272 Query: 126 gtcagcatacctgcagatctcaaggaagatgttgaggctgtacagataagtggtggccct 185 ||| | ||||| |||| | |||||||| ||||||||||| |||||||| || |||||| Sbjct: 1273 atcaccttacctttagatttgaaggaagacgttgaggctgttcagataagcggaggccct 1332 Query: 186 gctggcttggaagctgagttgcagcagcttagagatttgaatagggtcaatcaggagttg 245 ||||| |||||||| ||||||||||||||||| ||||| | || ||||||||||| || Sbjct: 1333 gctggattggaagcggagttgcagcagcttagggatttaagcagagtcaatcaggaatta 1392 Query: 246 cttgttcagactgaagagatgctgcagaaggaggcaagtgaagatgctcaattccggacg 305 ||||||||||| ||||||||||||||||||||||| | |||||||||||| || |||||| Sbjct: 1393 cttgttcagaccgaagagatgctgcagaaggaggcgaatgaagatgctcagtttcggacg 1452 Query: 306 caattcggaagtcgttggactaggcctcaatcaagtaccctaacaaagaacattcaagac 365 |||||||| |||||||||||||| |||||||| || ||||||||||| |||||||||||| Sbjct: 1453 caattcgggagtcgttggactagacctcaatctagcaccctaacaaaaaacattcaagac 1512 Query: 366 cgattgaatctttttgctggtaatcttaaaaaagcggctgcgagtgatgctttgatcgaa 425 ||||||||||| |||||| ||||||||| | ||| | || |||||| || ||| || Sbjct: 1513 cgattgaatctgtttgcttctaatcttaagacagctggtgatagtgattctcagattgag 1572 Query: 426 cgagatgtgaaggagagctaccccttgatgtctattcttgacagaagaccgatagagtct 485 |||| | ||||||||||||| || ||||| |||||||||||||||||||||||||||||| Sbjct: 1573 cgaggtttgaaggagagctatccattgatatctattcttgacagaagaccgatagagtct 1632 Query: 486 gcactaccaagtatttcaaggcctatcatgtccttggatgggaatgaagatgctatcgtt 545 |||||||| |||||||| |||||||| |||||||||||||||||||| |||||||| ||| Sbjct: 1633 gcactaccgagtatttctaggcctattatgtccttggatgggaatgaggatgctattgtt 1692 Query: 546 ggagcccttaaacaaagcttgaggcaactggaatctct 583 ||||||||||||||||||||||||||||| |||||||| Sbjct: 1693 ggagcccttaaacaaagcttgaggcaactagaatctct 1730
>dbj|AK103856.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033148O10, full insert sequence Length = 3011 Score = 583 bits (294), Expect = e-163 Identities = 507/578 (87%) Strand = Plus / Plus Query: 6 gagatggtagatgatatcattcggacccaggcagagaaacttcagcaatctagtgagatc 65 |||||||||||| | ||||| |||| || || |||||| | |||||| ||||||||||| Sbjct: 1273 gagatggtagataacatcatcaggactcaagcggagaaattacagcaagctagtgagatc 1332 Query: 66 actagggttaggctgaaggaaatggacttgcctgattctattctatcattggaaggtaat 125 ||||| |||||| ||||||||||||||||||| ||||| ||||| ||||| ||||||||| Sbjct: 1333 actagagttaggttgaaggaaatggacttgcccgattccattctttcattagaaggtaat 1392 Query: 126 gtcagcatacctgcagatctcaaggaagatgttgaggctgtacagataagtggtggccct 185 ||| | ||||| |||| | |||||||| ||||||||||| |||||||| || |||||| Sbjct: 1393 atcaccttacctttagatttgaaggaagacgttgaggctgttcagataagcggaggccct 1452 Query: 186 gctggcttggaagctgagttgcagcagcttagagatttgaatagggtcaatcaggagttg 245 ||||| |||||||| ||||||||||||||||| ||||| | || ||||||||||| || Sbjct: 1453 gctggattggaagcggagttgcagcagcttagggatttaagcagagtcaatcaggaatta 1512 Query: 246 cttgttcagactgaagagatgctgcagaaggaggcaagtgaagatgctcaattccggacg 305 ||||||||||| ||||||||||||||||||||||| | |||||||||||| || |||||| Sbjct: 1513 cttgttcagaccgaagagatgctgcagaaggaggcgaatgaagatgctcagtttcggacg 1572 Query: 306 caattcggaagtcgttggactaggcctcaatcaagtaccctaacaaagaacattcaagac 365 |||||||| |||||||||||||| |||||||| || ||||||||||| |||||||||||| Sbjct: 1573 caattcgggagtcgttggactagacctcaatctagcaccctaacaaaaaacattcaagac 1632 Query: 366 cgattgaatctttttgctggtaatcttaaaaaagcggctgcgagtgatgctttgatcgaa 425 ||||||||||| |||||| ||||||||| | ||| | || |||||| || ||| || Sbjct: 1633 cgattgaatctgtttgcttctaatcttaagacagctggtgatagtgattctcagattgag 1692 Query: 426 cgagatgtgaaggagagctaccccttgatgtctattcttgacagaagaccgatagagtct 485 |||| | ||||||||||||| || ||||| |||||||||||||||||||||||||||||| Sbjct: 1693 cgaggtttgaaggagagctatccattgatatctattcttgacagaagaccgatagagtct 1752 Query: 486 gcactaccaagtatttcaaggcctatcatgtccttggatgggaatgaagatgctatcgtt 545 |||||||| |||||||| |||||||| |||||||||||||||||||| |||||||| ||| Sbjct: 1753 gcactaccgagtatttctaggcctattatgtccttggatgggaatgaggatgctattgtt 1812 Query: 546 ggagcccttaaacaaagcttgaggcaactggaatctct 583 ||||||||||||||||||||||||||||| |||||||| Sbjct: 1813 ggagcccttaaacaaagcttgaggcaactagaatctct 1850
>gb|AC068950.11| Oryza sativa chromosome 10 BAC OSJNBa0041P03 genomic sequence, complete sequence Length = 139614 Score = 418 bits (211), Expect = e-114 Identities = 406/471 (86%) Strand = Plus / Plus Query: 6 gagatggtagatgatatcattcggacccaggcagagaaacttcagcaatctagtgagatc 65 |||||||||||| | ||||| |||| || || |||||| | |||||| ||||||||||| Sbjct: 24999 gagatggtagataacatcatcaggactcaagcggagaaattacagcaagctagtgagatc 25058 Query: 66 actagggttaggctgaaggaaatggacttgcctgattctattctatcattggaaggtaat 125 ||||| |||||| ||||||||||||||||||| ||||| ||||| ||||| ||||||||| Sbjct: 25059 actagagttaggttgaaggaaatggacttgcccgattccattctttcattagaaggtaat 25118 Query: 126 gtcagcatacctgcagatctcaaggaagatgttgaggctgtacagataagtggtggccct 185 ||| | ||||| |||| | |||||||| ||||||||||| |||||||| || |||||| Sbjct: 25119 atcaccttacctttagatttgaaggaagacgttgaggctgttcagataagcggaggccct 25178 Query: 186 gctggcttggaagctgagttgcagcagcttagagatttgaatagggtcaatcaggagttg 245 ||||| |||||||| ||||||||||||||||| ||||| | || ||||||||||| || Sbjct: 25179 gctggattggaagcggagttgcagcagcttagggatttaagcagagtcaatcaggaatta 25238 Query: 246 cttgttcagactgaagagatgctgcagaaggaggcaagtgaagatgctcaattccggacg 305 ||||||||||| ||||||||||||||||||||||| | |||||||||||| || |||||| Sbjct: 25239 cttgttcagaccgaagagatgctgcagaaggaggcgaatgaagatgctcagtttcggacg 25298 Query: 306 caattcggaagtcgttggactaggcctcaatcaagtaccctaacaaagaacattcaagac 365 |||||||| |||||||||||||| |||||||| || ||||||||||| |||||||||||| Sbjct: 25299 caattcgggagtcgttggactagacctcaatctagcaccctaacaaaaaacattcaagac 25358 Query: 366 cgattgaatctttttgctggtaatcttaaaaaagcggctgcgagtgatgctttgatcgaa 425 ||||||||||| |||||| ||||||||| | ||| | || |||||| || ||| || Sbjct: 25359 cgattgaatctgtttgcttctaatcttaagacagctggtgatagtgattctcagattgag 25418 Query: 426 cgagatgtgaaggagagctaccccttgatgtctattcttgacagaagaccg 476 |||| | ||||||||||||| || ||||| ||||||||||||||||||||| Sbjct: 25419 cgaggtttgaaggagagctatccattgatatctattcttgacagaagaccg 25469 Score = 141 bits (71), Expect = 3e-30 Identities = 86/91 (94%) Strand = Plus / Plus Query: 476 gatagagtctgcactaccaagtatttcaaggcctatcatgtccttggatgggaatgaaga 535 |||||||||||||||||| |||||||| |||||||| |||||||||||||||||||| || Sbjct: 25632 gatagagtctgcactaccgagtatttctaggcctattatgtccttggatgggaatgagga 25691 Query: 536 tgctatcgttggagcccttaaacaaagcttg 566 |||||| |||||||||||||||||||||||| Sbjct: 25692 tgctattgttggagcccttaaacaaagcttg 25722 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 246 cttgttcagactgaagagatgctgcagaaggaggc 280 ||||||||||| ||||||||||||||||||||||| Sbjct: 40719 cttgttcagaccgaagagatgctgcagaaggaggc 40753
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 418 bits (211), Expect = e-114 Identities = 406/471 (86%) Strand = Plus / Minus Query: 6 gagatggtagatgatatcattcggacccaggcagagaaacttcagcaatctagtgagatc 65 |||||||||||| | ||||| |||| || || |||||| | |||||| ||||||||||| Sbjct: 18325771 gagatggtagataacatcatcaggactcaagcggagaaattacagcaagctagtgagatc 18325712 Query: 66 actagggttaggctgaaggaaatggacttgcctgattctattctatcattggaaggtaat 125 ||||| |||||| ||||||||||||||||||| ||||| ||||| ||||| ||||||||| Sbjct: 18325711 actagagttaggttgaaggaaatggacttgcccgattccattctttcattagaaggtaat 18325652 Query: 126 gtcagcatacctgcagatctcaaggaagatgttgaggctgtacagataagtggtggccct 185 ||| | ||||| |||| | |||||||| ||||||||||| |||||||| || |||||| Sbjct: 18325651 atcaccttacctttagatttgaaggaagacgttgaggctgttcagataagcggaggccct 18325592 Query: 186 gctggcttggaagctgagttgcagcagcttagagatttgaatagggtcaatcaggagttg 245 ||||| |||||||| ||||||||||||||||| ||||| | || ||||||||||| || Sbjct: 18325591 gctggattggaagcggagttgcagcagcttagggatttaagcagagtcaatcaggaatta 18325532 Query: 246 cttgttcagactgaagagatgctgcagaaggaggcaagtgaagatgctcaattccggacg 305 ||||||||||| ||||||||||||||||||||||| | |||||||||||| || |||||| Sbjct: 18325531 cttgttcagaccgaagagatgctgcagaaggaggcgaatgaagatgctcagtttcggacg 18325472 Query: 306 caattcggaagtcgttggactaggcctcaatcaagtaccctaacaaagaacattcaagac 365 |||||||| |||||||||||||| |||||||| || ||||||||||| |||||||||||| Sbjct: 18325471 caattcgggagtcgttggactagacctcaatctagcaccctaacaaaaaacattcaagac 18325412 Query: 366 cgattgaatctttttgctggtaatcttaaaaaagcggctgcgagtgatgctttgatcgaa 425 ||||||||||| |||||| ||||||||| | ||| | || |||||| || ||| || Sbjct: 18325411 cgattgaatctgtttgcttctaatcttaagacagctggtgatagtgattctcagattgag 18325352 Query: 426 cgagatgtgaaggagagctaccccttgatgtctattcttgacagaagaccg 476 |||| | ||||||||||||| || ||||| ||||||||||||||||||||| Sbjct: 18325351 cgaggtttgaaggagagctatccattgatatctattcttgacagaagaccg 18325301 Score = 141 bits (71), Expect = 3e-30 Identities = 86/91 (94%) Strand = Plus / Minus Query: 476 gatagagtctgcactaccaagtatttcaaggcctatcatgtccttggatgggaatgaaga 535 |||||||||||||||||| |||||||| |||||||| |||||||||||||||||||| || Sbjct: 18325138 gatagagtctgcactaccgagtatttctaggcctattatgtccttggatgggaatgagga 18325079 Query: 536 tgctatcgttggagcccttaaacaaagcttg 566 |||||| |||||||||||||||||||||||| Sbjct: 18325078 tgctattgttggagcccttaaacaaagcttg 18325048 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Minus Query: 246 cttgttcagactgaagagatgctgcagaaggaggc 280 ||||||||||| ||||||||||||||||||||||| Sbjct: 18310051 cttgttcagaccgaagagatgctgcagaaggaggc 18310017
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 418 bits (211), Expect = e-114 Identities = 406/471 (86%) Strand = Plus / Minus Query: 6 gagatggtagatgatatcattcggacccaggcagagaaacttcagcaatctagtgagatc 65 |||||||||||| | ||||| |||| || || |||||| | |||||| ||||||||||| Sbjct: 18335424 gagatggtagataacatcatcaggactcaagcggagaaattacagcaagctagtgagatc 18335365 Query: 66 actagggttaggctgaaggaaatggacttgcctgattctattctatcattggaaggtaat 125 ||||| |||||| ||||||||||||||||||| ||||| ||||| ||||| ||||||||| Sbjct: 18335364 actagagttaggttgaaggaaatggacttgcccgattccattctttcattagaaggtaat 18335305 Query: 126 gtcagcatacctgcagatctcaaggaagatgttgaggctgtacagataagtggtggccct 185 ||| | ||||| |||| | |||||||| ||||||||||| |||||||| || |||||| Sbjct: 18335304 atcaccttacctttagatttgaaggaagacgttgaggctgttcagataagcggaggccct 18335245 Query: 186 gctggcttggaagctgagttgcagcagcttagagatttgaatagggtcaatcaggagttg 245 ||||| |||||||| ||||||||||||||||| ||||| | || ||||||||||| || Sbjct: 18335244 gctggattggaagcggagttgcagcagcttagggatttaagcagagtcaatcaggaatta 18335185 Query: 246 cttgttcagactgaagagatgctgcagaaggaggcaagtgaagatgctcaattccggacg 305 ||||||||||| ||||||||||||||||||||||| | |||||||||||| || |||||| Sbjct: 18335184 cttgttcagaccgaagagatgctgcagaaggaggcgaatgaagatgctcagtttcggacg 18335125 Query: 306 caattcggaagtcgttggactaggcctcaatcaagtaccctaacaaagaacattcaagac 365 |||||||| |||||||||||||| |||||||| || ||||||||||| |||||||||||| Sbjct: 18335124 caattcgggagtcgttggactagacctcaatctagcaccctaacaaaaaacattcaagac 18335065 Query: 366 cgattgaatctttttgctggtaatcttaaaaaagcggctgcgagtgatgctttgatcgaa 425 ||||||||||| |||||| ||||||||| | ||| | || |||||| || ||| || Sbjct: 18335064 cgattgaatctgtttgcttctaatcttaagacagctggtgatagtgattctcagattgag 18335005 Query: 426 cgagatgtgaaggagagctaccccttgatgtctattcttgacagaagaccg 476 |||| | ||||||||||||| || ||||| ||||||||||||||||||||| Sbjct: 18335004 cgaggtttgaaggagagctatccattgatatctattcttgacagaagaccg 18334954 Score = 141 bits (71), Expect = 3e-30 Identities = 86/91 (94%) Strand = Plus / Minus Query: 476 gatagagtctgcactaccaagtatttcaaggcctatcatgtccttggatgggaatgaaga 535 |||||||||||||||||| |||||||| |||||||| |||||||||||||||||||| || Sbjct: 18334791 gatagagtctgcactaccgagtatttctaggcctattatgtccttggatgggaatgagga 18334732 Query: 536 tgctatcgttggagcccttaaacaaagcttg 566 |||||| |||||||||||||||||||||||| Sbjct: 18334731 tgctattgttggagcccttaaacaaagcttg 18334701 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Minus Query: 246 cttgttcagactgaagagatgctgcagaaggaggc 280 ||||||||||| ||||||||||||||||||||||| Sbjct: 18319704 cttgttcagaccgaagagatgctgcagaaggaggc 18319670
>dbj|AK059840.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-206-D06, full insert sequence Length = 1264 Score = 178 bits (90), Expect = 1e-41 Identities = 108/114 (94%) Strand = Plus / Plus Query: 470 aagaccgatagagtctgcactaccaagtatttcaaggcctatcatgtccttggatgggaa 529 |||||||||||||||||||||||| |||||||| |||||||| ||||||||||||||||| Sbjct: 1 aagaccgatagagtctgcactaccgagtatttctaggcctattatgtccttggatgggaa 60 Query: 530 tgaagatgctatcgttggagcccttaaacaaagcttgaggcaactggaatctct 583 ||| |||||||| |||||||||||||||||||||||||||||||| |||||||| Sbjct: 61 tgaggatgctattgttggagcccttaaacaaagcttgaggcaactagaatctct 114
>ref|NM_101381.2| Arabidopsis thaliana unknown protein AT1G15130 mRNA, complete cds Length = 2823 Score = 119 bits (60), Expect = 1e-23 Identities = 177/216 (81%) Strand = Plus / Plus Query: 141 gatctcaaggaagatgttgaggctgtacagataagtggtggccctgctggcttggaagct 200 ||||| || |||||||| || ||||| ||||| |||||||| || ||||||||||||||| Sbjct: 1349 gatcttaaagaagatgtagaagctgttcagatcagtggtggtccagctggcttggaagct 1408 Query: 201 gagttgcagcagcttagagatttgaatagggtcaatcaggagttgcttgttcagactgaa 260 || ||||||| |||||||||||||| ||||| |||||||| || | || || |||||| Sbjct: 1409 gaactgcagcaacttagagatttgaagagggttaatcaggaactgttggtgcacactgaa 1468 Query: 261 gagatgctgcagaaggaggcaagtgaagatgctcaattccggacgcaattcggaagtcgt 320 ||| | ||||||| || |||| ||||||| |||| ||| | | ||||| || | ||| Sbjct: 1469 gagcttttgcagaaagaagcaactgaagattctcagttcagaagtcaatttgggactcgg 1528 Query: 321 tggactaggcctcaatcaagtaccctaacaaagaac 356 ||||||||||||||||| || || || ||||||||| Sbjct: 1529 tggactaggcctcaatctagcacactgacaaagaac 1564
>gb|AY149441.1| Arabidopsis thaliana At1g15130/F9L1_7 mRNA, complete cds Length = 2754 Score = 119 bits (60), Expect = 1e-23 Identities = 177/216 (81%) Strand = Plus / Plus Query: 141 gatctcaaggaagatgttgaggctgtacagataagtggtggccctgctggcttggaagct 200 ||||| || |||||||| || ||||| ||||| |||||||| || ||||||||||||||| Sbjct: 1333 gatcttaaagaagatgtagaagctgttcagatcagtggtggtccagctggcttggaagct 1392 Query: 201 gagttgcagcagcttagagatttgaatagggtcaatcaggagttgcttgttcagactgaa 260 || ||||||| |||||||||||||| ||||| |||||||| || | || || |||||| Sbjct: 1393 gaactgcagcaacttagagatttgaagagggttaatcaggaactgttggtgcacactgaa 1452 Query: 261 gagatgctgcagaaggaggcaagtgaagatgctcaattccggacgcaattcggaagtcgt 320 ||| | ||||||| || |||| ||||||| |||| ||| | | ||||| || | ||| Sbjct: 1453 gagcttttgcagaaagaagcaactgaagattctcagttcagaagtcaatttgggactcgg 1512 Query: 321 tggactaggcctcaatcaagtaccctaacaaagaac 356 ||||||||||||||||| || || || ||||||||| Sbjct: 1513 tggactaggcctcaatctagcacactgacaaagaac 1548
>gb|BT005821.1| Arabidopsis thaliana At1g15130/F9L1_7 gene, complete cds Length = 2541 Score = 119 bits (60), Expect = 1e-23 Identities = 177/216 (81%) Strand = Plus / Plus Query: 141 gatctcaaggaagatgttgaggctgtacagataagtggtggccctgctggcttggaagct 200 ||||| || |||||||| || ||||| ||||| |||||||| || ||||||||||||||| Sbjct: 1282 gatcttaaagaagatgtagaagctgttcagatcagtggtggtccagctggcttggaagct 1341 Query: 201 gagttgcagcagcttagagatttgaatagggtcaatcaggagttgcttgttcagactgaa 260 || ||||||| |||||||||||||| ||||| |||||||| || | || || |||||| Sbjct: 1342 gaactgcagcaacttagagatttgaagagggttaatcaggaactgttggtgcacactgaa 1401 Query: 261 gagatgctgcagaaggaggcaagtgaagatgctcaattccggacgcaattcggaagtcgt 320 ||| | ||||||| || |||| ||||||| |||| ||| | | ||||| || | ||| Sbjct: 1402 gagcttttgcagaaagaagcaactgaagattctcagttcagaagtcaatttgggactcgg 1461 Query: 321 tggactaggcctcaatcaagtaccctaacaaagaac 356 ||||||||||||||||| || || || ||||||||| Sbjct: 1462 tggactaggcctcaatctagcacactgacaaagaac 1497
>gb|AC007591.2|F9L1 Arabidopsis thaliana chromosome 1 BAC F9L1 sequence, complete sequence Length = 141984 Score = 119 bits (60), Expect = 1e-23 Identities = 177/216 (81%) Strand = Plus / Minus Query: 141 gatctcaaggaagatgttgaggctgtacagataagtggtggccctgctggcttggaagct 200 ||||| || |||||||| || ||||| ||||| |||||||| || ||||||||||||||| Sbjct: 23949 gatcttaaagaagatgtagaagctgttcagatcagtggtggtccagctggcttggaagct 23890 Query: 201 gagttgcagcagcttagagatttgaatagggtcaatcaggagttgcttgttcagactgaa 260 || ||||||| |||||||||||||| ||||| |||||||| || | || || |||||| Sbjct: 23889 gaactgcagcaacttagagatttgaagagggttaatcaggaactgttggtgcacactgaa 23830 Query: 261 gagatgctgcagaaggaggcaagtgaagatgctcaattccggacgcaattcggaagtcgt 320 ||| | ||||||| || |||| ||||||| |||| ||| | | ||||| || | ||| Sbjct: 23829 gagcttttgcagaaagaagcaactgaagattctcagttcagaagtcaatttgggactcgg 23770 Query: 321 tggactaggcctcaatcaagtaccctaacaaagaac 356 ||||||||||||||||| || || || ||||||||| Sbjct: 23769 tggactaggcctcaatctagcacactgacaaagaac 23734
>gb|AC144731.15| Medicago truncatula clone mth2-5g18, complete sequence Length = 115175 Score = 87.7 bits (44), Expect = 4e-14 Identities = 224/284 (78%) Strand = Plus / Minus Query: 72 gttaggctgaaggaaatggacttgcctgattctattctatcattggaaggtaatgtcagc 131 |||||||| | ||||||||| ||||| ||||||||||| | ||||||| ||| | | Sbjct: 85919 gttaggcttagggaaatggaattgccggattctattcttgctctggaaggaaattttact 85860 Query: 132 atacctgcagatctcaaggaagatgttgaggctgtacagataagtggtggccctgctggc 191 |||| || ||||||| |||||||| |||||||| ||||| ||||| || |||||||| Sbjct: 85859 ctacccacaaatctcaaagaagatgtggaggctgtccagattagtggggggcctgctggt 85800 Query: 192 ttggaagctgagttgcagcagcttagagatttgaatagggtcaatcaggagttgcttgtt 251 |||||| | |||||||||||||||| || | | ||||| ||||| || |||| || Sbjct: 85799 ttggaatcagagttgcagcagcttaaggacctaaggagggttaatcaagaactgctggtc 85740 Query: 252 cagactgaagagatgctgcagaaggaggcaagtgaagatgctcaattccggacgcaattc 311 ||||| || ||| || |||||||||| |||| |||||||||||||| | | |||||| Sbjct: 85739 cagaccgaggagttgttgcagaaggaatcaagagaagatgctcaatttagaagtcaattc 85680 Query: 312 ggaagtcgttggactaggcctcaatcaagtaccctaacaaagaa 355 || | | |||||||||||||| ||||| || || |||||||| Sbjct: 85679 ggcactaagtggactaggcctcagtcaagcactctgacaaagaa 85636 Score = 40.1 bits (20), Expect = 8.0 Identities = 68/84 (80%) Strand = Plus / Minus Query: 483 tctgcactaccaagtatttcaaggcctatcatgtccttggatgggaatgaagatgctatc 542 |||||||| |||||| | ||||||| || ||||| || ||| |||||||||||||| Sbjct: 85410 tctgcacttccaagtttggcaaggccaattatgtcttttgatcaaaatgaagatgctatt 85351 Query: 543 gttggagcccttaaacaaagcttg 566 || || |||| |||||||||||| Sbjct: 85350 gtagggtccctcaaacaaagcttg 85327
>dbj|AB120526.1| Nicotiana tabacum HMA9 mRNA for ALG2-interacting protein X, complete cds Length = 3038 Score = 69.9 bits (35), Expect = 9e-09 Identities = 164/207 (79%) Strand = Plus / Plus Query: 150 gaagatgttgaggctgtacagataagtggtggccctgctggcttggaagctgagttgcag 209 |||||||| ||||| || || || ||||||| || ||||| ||||| |||||| ||||| Sbjct: 1336 gaagatgtagaggcagtgcaaatttgtggtggtccagctggtttggatgctgagctgcag 1395 Query: 210 cagcttagagatttgaatagggtcaatcaggagttgcttgttcagactgaagagatgctg 269 || || ||||||||||| ||||| || ||||||||||| || ||||| || || || Sbjct: 1396 caactcagagatttgaagagggtgaaccaggagttgctggtccagaccgaggaacatttg 1455 Query: 270 cagaaggaggcaagtgaagatgctcaattccggacgcaattcggaagtcgttggactagg 329 || || || |||| |||||||| ||||| | || ||||| |||| || ||||| ||| Sbjct: 1456 caaaaagaagcaacagaagatgcacaatttagaactcaatttggaacacgatggacaagg 1515 Query: 330 cctcaatcaagtaccctaacaaagaac 356 |||||||| | |||| ||||||||||| Sbjct: 1516 cctcaatctactaccttaacaaagaac 1542 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 84 gaaatggacttgcctgattctattct 109 |||||||||||||||||||||||||| Sbjct: 1270 gaaatggacttgcctgattctattct 1295
>emb|CR792453.9| Zebrafish DNA sequence from clone DKEY-12F6 in linkage group 3, complete sequence Length = 198873 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 254 gactgaagagatgctgcagaa 274 ||||||||||||||||||||| Sbjct: 172493 gactgaagagatgctgcagaa 172473
>gb|AF316405.1|AF316405 Helianthus annuus resistance gene analog PU3 (PU3) gene, partial cds Length = 4187 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 519 ttggatgggaatgaagatgct 539 ||||||||||||||||||||| Sbjct: 3068 ttggatgggaatgaagatgct 3048
>gb|AC122309.5| Mus musculus BAC clone RP23-293G2 from chromosome 14, complete sequence Length = 208443 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 124 atgtcagcatacctgcagat 143 |||||||||||||||||||| Sbjct: 15444 atgtcagcatacctgcagat 15463
>gb|AC163358.3| Mus musculus BAC clone RP23-11M14 from chromosome 14, complete sequence Length = 208634 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 124 atgtcagcatacctgcagat 143 |||||||||||||||||||| Sbjct: 152641 atgtcagcatacctgcagat 152660
>ref|XM_580704.2| PREDICTED: Bos taurus similar to olfactomedin 3 (LOC538499), partial mRNA Length = 2412 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 502 caaggcctatcatgtccttg 521 |||||||||||||||||||| Sbjct: 1503 caaggcctatcatgtccttg 1522
>gb|AC166982.4| Mus musculus chromosome 18, clone RP24-377P23, complete sequence Length = 154269 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 142 atctcaaggaagatgttgaggctg 165 |||||||||| ||||||||||||| Sbjct: 17317 atctcaaggatgatgttgaggctg 17340
>gb|AY358722.1| Homo sapiens clone DNA89220 olfM3 (UNQ1924) mRNA, complete cds Length = 2207 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 502 caaggcctatcatgtccttg 521 |||||||||||||||||||| Sbjct: 1709 caaggcctatcatgtccttg 1728
>emb|AL163285.2|HS21C085 Homo sapiens chromosome 21 segment HS21C085 Length = 340000 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 146 caaggaagatgttgaggctg 165 |||||||||||||||||||| Sbjct: 118396 caaggaagatgttgaggctg 118377
>emb|BX088645.7| Human DNA sequence from clone RP11-74L19 on chromosome 9 Contains a pseudogene similar to part of contactin associated protein family, a novel pseudogene and a CpG island, complete sequence Length = 152623 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 124 atgtcagcatacctgcagat 143 |||||||||||||||||||| Sbjct: 26989 atgtcagcatacctgcagat 27008
>emb|AL162501.11| Human DNA sequence from clone RP11-138L21 on chromosome 9 Contains the 5' end of the CNTNAP3 gene for a contactin associated protein-like 3 and two CpG islands, complete sequence Length = 118564 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 124 atgtcagcatacctgcagat 143 |||||||||||||||||||| Sbjct: 92750 atgtcagcatacctgcagat 92731
>ref|NM_058170.1| Homo sapiens olfactomedin 3 (OLFM3), mRNA Length = 3231 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 502 caaggcctatcatgtccttg 521 |||||||||||||||||||| Sbjct: 1754 caaggcctatcatgtccttg 1773
>emb|AL008987.1|HS849L7 Human DNA sequence from clone RP5-849L7 on chromosome Xq21 Contains a dendritic cell protein (GA17) pseudogene, complete sequence Length = 128169 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 548 agcccttaaacaaagcttga 567 |||||||||||||||||||| Sbjct: 106918 agcccttaaacaaagcttga 106937
>emb|Z99114.2|BSUB0011 Bacillus subtilis complete genome (section 11 of 21): from 2014895 to 2207855 Length = 192961 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 77 gctgaaggaaatggacttgc 96 |||||||||||||||||||| Sbjct: 136938 gctgaaggaaatggacttgc 136957
>gb|BC022531.1| Homo sapiens olfactomedin 3, mRNA (cDNA clone MGC:26675 IMAGE:4812035), complete cds Length = 3231 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 502 caaggcctatcatgtccttg 521 |||||||||||||||||||| Sbjct: 1754 caaggcctatcatgtccttg 1773
>dbj|AK095724.1| Homo sapiens cDNA FLJ38405 fis, clone FEBRA2008662, moderately similar to NEURONAL OLFACTOMEDIN-RELATED ER LOCALIZED PROTEIN PRECURSOR Length = 2257 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 502 caaggcctatcatgtccttg 521 |||||||||||||||||||| Sbjct: 1792 caaggcctatcatgtccttg 1811
>dbj|AK095551.1| Homo sapiens cDNA FLJ38232 fis, clone FCBBF2004930, moderately similar to NEURONAL OLFACTOMEDIN-RELATED ER LOCALIZED PROTEIN PRECURSOR Length = 2687 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 502 caaggcctatcatgtccttg 521 |||||||||||||||||||| Sbjct: 1221 caaggcctatcatgtccttg 1240
>emb|CR604928.1| full-length cDNA clone CS0DN002YL04 of Adult brain of Homo sapiens (human) Length = 2421 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 502 caaggcctatcatgtccttg 521 |||||||||||||||||||| Sbjct: 986 caaggcctatcatgtccttg 1005
>gb|AC160646.2| Gallus gallus BAC clone CH261-24P2 from chromosome unknown, complete sequence Length = 212960 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 274 aggaggcaagtgaagatgct 293 |||||||||||||||||||| Sbjct: 105590 aggaggcaagtgaagatgct 105609
>gb|AF397393.2|AF397393 Homo sapiens NOE3-2 (NOE3) mRNA, complete cds, alternatively spliced Length = 2926 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 502 caaggcctatcatgtccttg 521 |||||||||||||||||||| Sbjct: 2375 caaggcctatcatgtccttg 2394
>gb|AF397392.2|AF397392 Homo sapiens NOE3-1 (NOE3) mRNA, complete cds, alternatively spliced Length = 2189 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 502 caaggcctatcatgtccttg 521 |||||||||||||||||||| Sbjct: 1638 caaggcctatcatgtccttg 1657
>gb|AF397397.1|AF397397 Homo sapiens NOE3-6 (NOE3) mRNA, complete cds, alternatively spliced Length = 3016 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 502 caaggcctatcatgtccttg 521 |||||||||||||||||||| Sbjct: 2465 caaggcctatcatgtccttg 2484
>gb|AF397396.1|AF397396 Homo sapiens NOE3-5 (NOE3) mRNA, complete cds, alternatively spliced Length = 2279 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 502 caaggcctatcatgtccttg 521 |||||||||||||||||||| Sbjct: 1728 caaggcctatcatgtccttg 1747
>gb|AF397395.1|AF397395 Homo sapiens NOE3-4 (NOE3) mRNA, complete cds, alternatively spliced Length = 2955 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 502 caaggcctatcatgtccttg 521 |||||||||||||||||||| Sbjct: 2404 caaggcctatcatgtccttg 2423
>gb|AF397394.1|AF397394 Homo sapiens NOE3-3 (NOE3) mRNA, complete cds, alternatively spliced Length = 2218 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 502 caaggcctatcatgtccttg 521 |||||||||||||||||||| Sbjct: 1667 caaggcctatcatgtccttg 1686
>gb|AC175674.2| Gallus gallus BAC clone CH261-137E22 from chromosome ul, complete sequence Length = 216348 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 245 gcttgttcagactgaagaga 264 |||||||||||||||||||| Sbjct: 97259 gcttgttcagactgaagaga 97240
>tpg|BK001429.1| TPA: TPA_exp: Homo sapiens NOELIN3 (OLFM3) gene, complete cds; alternatively spliced Length = 195421 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 502 caaggcctatcatgtccttg 521 |||||||||||||||||||| Sbjct: 193869 caaggcctatcatgtccttg 193888
>gb|AF015775.1|AF015775 Bacillus subtilis YodA (yodA), YodB (yodB), YodC (yodC), YodD (yodD), ABC-transporter (yodE), permease (yodF), proteinase (ctpA), YodH (yodH), YodI (yodI), carboxypeptidase (yodJ), purine nucleoside phosphorylase (deoD), YodL (yodL), YodM (yodM), YodN (yodN), YodO (yodO), YodP (yodP), acetylornitine deacetylase (argE), butirate-acetoacetate CoA transferase (yodR), butyrate acetoacetate-CoA transferase (yodS), YodT (yodT), CgeE (cgeE), CgeD (cgeD), CgeC (cgeC), CgeA (cgeA), CgeB (cgeB), YzxA (yzxA), UDP-glucose epimerase (yodU), YodV (yodV), and YodW (yodW) genes, complete cds; and YodZ (yodZ) gene, partial cds Length = 29950 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 77 gctgaaggaaatggacttgc 96 |||||||||||||||||||| Sbjct: 26577 gctgaaggaaatggacttgc 26596
>emb|AL049869.6|CNS0000P Human chromosome 14 DNA sequence BAC R-973N13 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 195840 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 135 cctgcagatctcaaggaaga 154 |||||||||||||||||||| Sbjct: 60042 cctgcagatctcaaggaaga 60061
>emb|AL359760.10| Human DNA sequence from clone RP11-556K13 on chromosome 1 Contains a laminin receptor 1 (ribosomal protein SA, 67kDa) (LAMR1) pseudogene and the 3' end of the OLFM3 gene for olfactomedin 3, complete sequence Length = 79057 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 502 caaggcctatcatgtccttg 521 |||||||||||||||||||| Sbjct: 34710 caaggcctatcatgtccttg 34691
>emb|AL773578.1|HS265B9 Homo sapiens chromosome 21 from PAC RP1-265B9 map 21q22.2,D21S349-MX1, complete sequence Length = 157662 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 146 caaggaagatgttgaggctg 165 |||||||||||||||||||| Sbjct: 44620 caaggaagatgttgaggctg 44601
>gb|AF020713.1|AF020713 Bacteriophage SPBc2 complete genome Length = 134416 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 77 gctgaaggaaatggacttgc 96 |||||||||||||||||||| Sbjct: 133813 gctgaaggaaatggacttgc 133794
>gb|AF006665.1|AF006665 Bacillus subtilis 168 region at 182 min containing the cge gene cluster Length = 30100 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 77 gctgaaggaaatggacttgc 96 |||||||||||||||||||| Sbjct: 3557 gctgaaggaaatggacttgc 3538
>gb|AC091764.35| Mus musculus strain C57BL/6J chromosome 10 clone rp23-202b12, complete sequence Length = 230848 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 148 aggaagatgttgaggctgta 167 |||||||||||||||||||| Sbjct: 139818 aggaagatgttgaggctgta 139799
>emb|AL928586.10| Mouse DNA sequence from clone RP23-353H5 on chromosome 2, complete sequence Length = 105895 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 274 aggaggcaagtgaagatgct 293 |||||||||||||||||||| Sbjct: 72669 aggaggcaagtgaagatgct 72650 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,059,082 Number of Sequences: 3902068 Number of extensions: 5059082 Number of successful extensions: 90275 Number of sequences better than 10.0: 46 Number of HSP's better than 10.0 without gapping: 46 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 90151 Number of HSP's gapped (non-prelim): 119 length of query: 589 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 566 effective length of database: 17,143,297,704 effective search space: 9703106500464 effective search space used: 9703106500464 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)