ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal23b10 |
|---|---|
| Clone Library Name | barley_pub |
>RL7A_ORYSA (P35685) 60S ribosomal protein L7a| Length = 258 Score = 280 bits (717), Expect = 1e-75 Identities = 141/162 (87%), Positives = 143/162 (88%) Frame = +2 Query: 59 MAPKRGGKAPVPAKKKTEKVTNPLFEKRPKQFGIGGALPPKKDLHRFVKWPXXXXXXXXX 238 MAPKRGG+APVPAKKKTEKVTNPLFEKRPKQFGIGGALPPKKDLHRFVKWP Sbjct: 1 MAPKRGGRAPVPAKKKTEKVTNPLFEKRPKQFGIGGALPPKKDLHRFVKWPKVVRIQRQR 60 Query: 239 XXXXXXXXXPPALHQFTRTLDKNLATNLFKMLLKYRPEDKVAKKERLLKRAQAEAEGKTV 418 PPAL+QFTRTLDKNLATNLFKMLLKYRPEDK AKKERLLKRAQAEAEGKTV Sbjct: 61 RILKQRLKVPPALNQFTRTLDKNLATNLFKMLLKYRPEDKAAKKERLLKRAQAEAEGKTV 120 Query: 419 EAKKPIVVKYGLNHVTYLIEQSKAQLVVIAHDVDPIELVVWL 544 EAKKPIVVKYGLNHVTYLIEQSKAQLVVIAHDVDPIELVVWL Sbjct: 121 EAKKPIVVKYGLNHVTYLIEQSKAQLVVIAHDVDPIELVVWL 162
>RL7A_ARATH (P49692) 60S ribosomal protein L7a| Length = 257 Score = 239 bits (609), Expect = 5e-63 Identities = 123/163 (75%), Positives = 136/163 (83%), Gaps = 1/163 (0%) Frame = +2 Query: 59 MAPKRGGKAPVPAKKKT-EKVTNPLFEKRPKQFGIGGALPPKKDLHRFVKWPXXXXXXXX 235 MAPK+G K V AKKKT EKV+NPLFE+RPKQFGIGGALPPKKDL R++KWP Sbjct: 1 MAPKKGVK--VAAKKKTAEKVSNPLFERRPKQFGIGGALPPKKDLSRYIKWPKSIRLQRQ 58 Query: 236 XXXXXXXXXXPPALHQFTRTLDKNLATNLFKMLLKYRPEDKVAKKERLLKRAQAEAEGKT 415 PPAL+QFT+TLDKNLAT+LFK+LLKYRPEDK AKKERL+K+AQAEAEGK Sbjct: 59 KRILKQRLKVPPALNQFTKTLDKNLATSLFKVLLKYRPEDKAAKKERLVKKAQAEAEGKP 118 Query: 416 VEAKKPIVVKYGLNHVTYLIEQSKAQLVVIAHDVDPIELVVWL 544 E+KKPIVVKYGLNHVTYLIEQ+KAQLVVIAHDVDPIELVVWL Sbjct: 119 SESKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWL 161
>RL7A_RAT (P62425) 60S ribosomal protein L7a| Length = 265 Score = 161 bits (408), Expect = 1e-39 Identities = 87/158 (55%), Positives = 106/158 (67%), Gaps = 4/158 (2%) Frame = +2 Query: 83 APVPA---KKKTEKVTNPLFEKRPKQFGIGGALPPKKDLHRFVKWPXXXXXXXXXXXXXX 253 AP PA K++ +KV NPLFEKRPK FGIG + PK+DL RFVKWP Sbjct: 12 APAPAVVKKQEAKKVVNPLFEKRPKNFGIGQDIQPKRDLTRFVKWPRYIRLQRQRAILYK 71 Query: 254 XXXXPPALHQFTRTLDKNLATNLFKMLLKYRPEDKVAKKERLLKRAQAEAEGK-TVEAKK 430 PPA++QFT+ LD+ AT L K+ KYRPE K KK+RLL RA+ +A GK V K+ Sbjct: 72 RLKVPPAINQFTQALDRQTATQLLKLAHKYRPETKQEKKQRLLARAEKKAAGKGDVPTKR 131 Query: 431 PIVVKYGLNHVTYLIEQSKAQLVVIAHDVDPIELVVWL 544 P V++ G+N VT L+E KAQLVVIAHDVDPIELVV+L Sbjct: 132 PPVLRAGVNTVTTLVENKKAQLVVIAHDVDPIELVVFL 169
>RL7A_MOUSE (P12970) 60S ribosomal protein L7a (Surfeit locus protein 3)| Length = 265 Score = 161 bits (408), Expect = 1e-39 Identities = 87/158 (55%), Positives = 106/158 (67%), Gaps = 4/158 (2%) Frame = +2 Query: 83 APVPA---KKKTEKVTNPLFEKRPKQFGIGGALPPKKDLHRFVKWPXXXXXXXXXXXXXX 253 AP PA K++ +KV NPLFEKRPK FGIG + PK+DL RFVKWP Sbjct: 12 APAPAVVKKQEAKKVVNPLFEKRPKNFGIGQDIQPKRDLTRFVKWPRYIRLQRQRAILYK 71 Query: 254 XXXXPPALHQFTRTLDKNLATNLFKMLLKYRPEDKVAKKERLLKRAQAEAEGK-TVEAKK 430 PPA++QFT+ LD+ AT L K+ KYRPE K KK+RLL RA+ +A GK V K+ Sbjct: 72 RLKVPPAINQFTQALDRQTATQLLKLAHKYRPETKQEKKQRLLARAEKKAAGKGDVPTKR 131 Query: 431 PIVVKYGLNHVTYLIEQSKAQLVVIAHDVDPIELVVWL 544 P V++ G+N VT L+E KAQLVVIAHDVDPIELVV+L Sbjct: 132 PPVLRAGVNTVTTLVENKKAQLVVIAHDVDPIELVVFL 169
>RL7A_HUMAN (P62424) 60S ribosomal protein L7a (Surfeit locus protein 3) (PLA-X| polypeptide) Length = 265 Score = 161 bits (408), Expect = 1e-39 Identities = 87/158 (55%), Positives = 106/158 (67%), Gaps = 4/158 (2%) Frame = +2 Query: 83 APVPA---KKKTEKVTNPLFEKRPKQFGIGGALPPKKDLHRFVKWPXXXXXXXXXXXXXX 253 AP PA K++ +KV NPLFEKRPK FGIG + PK+DL RFVKWP Sbjct: 12 APAPAVVKKQEAKKVVNPLFEKRPKNFGIGQDIQPKRDLTRFVKWPRYIRLQRQRAILYK 71 Query: 254 XXXXPPALHQFTRTLDKNLATNLFKMLLKYRPEDKVAKKERLLKRAQAEAEGK-TVEAKK 430 PPA++QFT+ LD+ AT L K+ KYRPE K KK+RLL RA+ +A GK V K+ Sbjct: 72 RLKVPPAINQFTQALDRQTATQLLKLAHKYRPETKQEKKQRLLARAEKKAAGKGDVPTKR 131 Query: 431 PIVVKYGLNHVTYLIEQSKAQLVVIAHDVDPIELVVWL 544 P V++ G+N VT L+E KAQLVVIAHDVDPIELVV+L Sbjct: 132 PPVLRAGVNTVTTLVENKKAQLVVIAHDVDPIELVVFL 169
>RL7A_DROME (P46223) 60S ribosomal protein L7a| Length = 271 Score = 160 bits (406), Expect = 2e-39 Identities = 89/161 (55%), Positives = 106/161 (65%), Gaps = 2/161 (1%) Frame = +2 Query: 68 KRGGKAPVPAKKKT-EKVTNPLFEKRPKQFGIGGALPPKKDLHRFVKWPXXXXXXXXXXX 244 K+ AP+ KK +KV N LFEKRPK FGIG + PK+DL RFV+WP Sbjct: 15 KKVAPAPLAVKKPVVKKVVNQLFEKRPKNFGIGQNVQPKRDLSRFVRWPKYIRVQRQKAV 74 Query: 245 XXXXXXXPPALHQFTRTLDKNLATNLFKMLLKYRPEDKVAKKERLLKRAQAEAEGKTVE- 421 PP +HQF++TLDK A LFK+L KYRPE +AKK RL K A+A+A+GK VE Sbjct: 75 LQKRLKVPPPIHQFSQTLDKTTAVKLFKLLEKYRPESPLAKKLRLKKIAEAKAKGKDVEP 134 Query: 422 AKKPIVVKYGLNHVTYLIEQSKAQLVVIAHDVDPIELVVWL 544 KKP V G N VT LIEQ KAQLVVIAHDVDP+ELV++L Sbjct: 135 KKKPSYVSAGTNTVTKLIEQKKAQLVVIAHDVDPLELVLFL 175
>RL7A_ICTPU (Q90YW2) 60S ribosomal protein L7a| Length = 265 Score = 160 bits (405), Expect = 2e-39 Identities = 88/161 (54%), Positives = 106/161 (65%), Gaps = 2/161 (1%) Frame = +2 Query: 68 KRGGKAPVPAKK-KTEKVTNPLFEKRPKQFGIGGALPPKKDLHRFVKWPXXXXXXXXXXX 244 K+ AP AKK + +KV NPLFEKRPK FGIG + PK+DL RFVKWP Sbjct: 9 KKVAPAPSVAKKHEVKKVVNPLFEKRPKNFGIGQDIQPKRDLTRFVKWPRYVRLQRHGSI 68 Query: 245 XXXXXXXPPALHQFTRTLDKNLATNLFKMLLKYRPEDKVAKKERLLKRAQAEAEGK-TVE 421 PPA++QF + LD+ AT LFK+ KYRPE K KK RLL RA+ +A GK V Sbjct: 69 LYKRLKVPPAINQFNQALDRQTATQLFKLAHKYRPETKQEKKRRLLARAEQKAAGKGDVP 128 Query: 422 AKKPIVVKYGLNHVTYLIEQSKAQLVVIAHDVDPIELVVWL 544 K+P VV+ G+N VT L+E KAQLVVIAHDVDPIELV++L Sbjct: 129 TKRPPVVRAGVNTVTSLVESKKAQLVVIAHDVDPIELVLFL 169
>RL7A_FUGRU (O57592) 60S ribosomal protein L7a (Surfeit locus protein 3)| Length = 265 Score = 160 bits (405), Expect = 2e-39 Identities = 86/161 (53%), Positives = 107/161 (66%), Gaps = 2/161 (1%) Frame = +2 Query: 68 KRGGKAPVPAKK-KTEKVTNPLFEKRPKQFGIGGALPPKKDLHRFVKWPXXXXXXXXXXX 244 K+ AP AKK + +KV NPLFEKRPK FGIG + PK+DL RFVKWP Sbjct: 9 KKVAPAPSVAKKHEAKKVVNPLFEKRPKNFGIGQDIQPKRDLTRFVKWPRYIRLQRQRSI 68 Query: 245 XXXXXXXPPALHQFTRTLDKNLATNLFKMLLKYRPEDKVAKKERLLKRAQAEAEGK-TVE 421 PPA++QFT+ LD+ AT LFK+ KYRPE K KK+RLL RA+ +A GK Sbjct: 69 LYKRLKVPPAINQFTQALDRQTATQLFKLAHKYRPETKQEKKKRLLARAEQKAAGKGDAP 128 Query: 422 AKKPIVVKYGLNHVTYLIEQSKAQLVVIAHDVDPIELVVWL 544 K+P V++ G+N +T L+E KAQLVVIAHDVDPIELV++L Sbjct: 129 TKRPPVLRAGVNTITSLVENKKAQLVVIAHDVDPIELVIFL 169
>RL7A_CHICK (P32429) 60S ribosomal protein L7a| Length = 265 Score = 158 bits (400), Expect = 8e-39 Identities = 85/158 (53%), Positives = 105/158 (66%), Gaps = 4/158 (2%) Frame = +2 Query: 83 APVPA---KKKTEKVTNPLFEKRPKQFGIGGALPPKKDLHRFVKWPXXXXXXXXXXXXXX 253 AP PA K++ +KV NPLFEKRPK FGIG + PK+DL RFVKWP Sbjct: 12 APAPAVVKKQEAKKVVNPLFEKRPKNFGIGQDIQPKRDLTRFVKWPRYIRLQRQRSILYK 71 Query: 254 XXXXPPALHQFTRTLDKNLATNLFKMLLKYRPEDKVAKKERLLKRAQAEAEGK-TVEAKK 430 PPA++QF++ LD+ AT L K+ KYRPE K KK+RLL RA+ +A GK K+ Sbjct: 72 RLKVPPAINQFSQALDRQTATQLLKLAHKYRPETKQEKKQRLLARAEQKAAGKGDTPTKR 131 Query: 431 PIVVKYGLNHVTYLIEQSKAQLVVIAHDVDPIELVVWL 544 P V++ G+N VT L+E KAQLVVIAHDVDPIELVV+L Sbjct: 132 PPVLRAGVNTVTTLVENKKAQLVVIAHDVDPIELVVFL 169
>RL8_SCHPO (O13672) 60S ribosomal protein L8 (L7A) (L4)| Length = 258 Score = 157 bits (398), Expect = 1e-38 Identities = 89/165 (53%), Positives = 106/165 (64%), Gaps = 4/165 (2%) Frame = +2 Query: 62 APKRGGKAPVP-AKKKTEKVT-NPLFEKRPKQFGIGGALPPKKDLHRFVKWPXXXXXXXX 235 APK AP P A+ K K T NPLF RP+ FGIG + PK+DL RFVKWP Sbjct: 1 APKSKKVAPSPFAQPKAAKTTKNPLFVSRPRSFGIGQDIQPKRDLSRFVKWPEYIRLQRR 60 Query: 236 XXXXXXXXXXPPALHQFTRTLDKNLATNLFKMLLKYRPEDKVAKKERLLKRAQAEAEGKT 415 PPA+ QF +TLDKN AT +FK+L KYRPE KK+RL+ A+A A GK+ Sbjct: 61 RKILNLRLKVPPAIAQFQKTLDKNTATQVFKLLNKYRPETAAEKKQRLVAEAEAVANGKS 120 Query: 416 VE--AKKPIVVKYGLNHVTYLIEQSKAQLVVIAHDVDPIELVVWL 544 + +KKP VKYGLNHV LIE KA+LV+IA DVDPIELVV+L Sbjct: 121 AQDVSKKPYNVKYGLNHVVALIEAKKAKLVLIASDVDPIELVVFL 165
>RL8A_YEAST (P17076) 60S ribosomal protein L8-A (L7A-2) (L4-2) (YL5) (RP6)| (Maintenance of killer protein 7) Length = 255 Score = 147 bits (371), Expect = 2e-35 Identities = 82/162 (50%), Positives = 98/162 (60%), Gaps = 3/162 (1%) Frame = +2 Query: 68 KRGGKAPVPAKK-KTEKVTNPLFEKRPKQFGIGGALPPKKDLHRFVKWPXXXXXXXXXXX 244 K+ AP AK K+ K NPL PK FGIG A+ PK++L R+VKWP Sbjct: 4 KKVAPAPFGAKSTKSNKTRNPLTHSTPKNFGIGQAVQPKRNLSRYVKWPEYVRVQRQKKI 63 Query: 245 XXXXXXXPPALHQFTRTLDKNLATNLFKMLLKYRPEDKVAKKERLLKRAQAEAEGKTVE- 421 PP + QF TLD+N A FK+ KYRPE KKERL K A A AEGK+ + Sbjct: 64 LSIRLKVPPTIAQFQYTLDRNTAAETFKLFNKYRPETAAEKKERLTKEAAAVAEGKSKQD 123 Query: 422 -AKKPIVVKYGLNHVTYLIEQSKAQLVVIAHDVDPIELVVWL 544 + KP VKYGLNHV LIE KA+LV+IA+DVDPIELVV+L Sbjct: 124 ASPKPYAVKYGLNHVVALIENKKAKLVLIANDVDPIELVVFL 165
>RL8B_YEAST (P29453) 60S ribosomal protein L8-B (L7A-1) (L4-1) (YL5) (RP6)| Length = 255 Score = 147 bits (370), Expect = 2e-35 Identities = 82/162 (50%), Positives = 98/162 (60%), Gaps = 3/162 (1%) Frame = +2 Query: 68 KRGGKAPVPAKK-KTEKVTNPLFEKRPKQFGIGGALPPKKDLHRFVKWPXXXXXXXXXXX 244 K+ AP AK K+ K NPL PK FGIG A+ PK++L R+VKWP Sbjct: 4 KKVAPAPFGAKSTKSNKAKNPLTHSTPKNFGIGQAVQPKRNLSRYVKWPEYVRLQRQKKI 63 Query: 245 XXXXXXXPPALHQFTRTLDKNLATNLFKMLLKYRPEDKVAKKERLLKRAQAEAEGKTVE- 421 PP + QF TLD+N A FK+ KYRPE KKERL K A A AEGK+ + Sbjct: 64 LSIRLKVPPTIAQFQYTLDRNTAAETFKLFNKYRPETAAEKKERLTKEAAAIAEGKSKQD 123 Query: 422 -AKKPIVVKYGLNHVTYLIEQSKAQLVVIAHDVDPIELVVWL 544 + KP VKYGLNHV LIE KA+LV+IA+DVDPIELVV+L Sbjct: 124 ASPKPYAVKYGLNHVVSLIENKKAKLVLIANDVDPIELVVFL 165
>RL7A_ANOGA (O76732) 60S ribosomal protein L7a| Length = 271 Score = 140 bits (354), Expect = 2e-33 Identities = 73/152 (48%), Positives = 98/152 (64%), Gaps = 1/152 (0%) Frame = +2 Query: 92 PAKKKTEKVTNPLFEKRPKQFGIGGALPPKKDLHRFVKWPXXXXXXXXXXXXXXXXXXPP 271 P K + +KV NPLFEKR K +GIG + PK+DL RFVKWP PP Sbjct: 25 PKKVEVKKVVNPLFEKRVKNYGIGQNVQPKRDLSRFVKWPKYIRIQRHRAILQKRLKIPP 84 Query: 272 ALHQFTRTLDKNLATNLFKMLLKYRPEDKVAKKERLLKRAQAEAEGK-TVEAKKPIVVKY 448 ++QFT+TLDK A + K KYRPE+ +A+ +RL +A+A+A GK +K+ ++ Sbjct: 85 PINQFTQTLDKPTAQQVMKCWKKYRPENPIARVQRLKAKAEAKAAGKEEPPSKRANQLRQ 144 Query: 449 GLNHVTYLIEQSKAQLVVIAHDVDPIELVVWL 544 G+N V ++EQ KAQLV+IAHDVDPIELVV+L Sbjct: 145 GINSVVKMVEQKKAQLVIIAHDVDPIELVVYL 176
>RL7A_CAEEL (Q966C6) 60S ribosomal protein L7a| Length = 264 Score = 132 bits (332), Expect = 6e-31 Identities = 72/156 (46%), Positives = 95/156 (60%), Gaps = 2/156 (1%) Frame = +2 Query: 83 APVPAKKKTEK-VTNPLFEKRPKQFGIGGALPPKKDLHRFVKWPXXXXXXXXXXXXXXXX 259 A + A+ + +K V NPLFEKR + F IG + PKKD+ RFVKWP Sbjct: 15 AHIRAQTQVQKEVKNPLFEKRARNFNIGQDIQPKKDVTRFVKWPKYIRLQRQSAILQKRL 74 Query: 260 XXPPALHQFTRTLDKNLATNLFKMLLKYRPEDKVAKKERLLKRAQAEAEGKTVE-AKKPI 436 PP ++QF LD A FK+L KYRPE AKK RL RA+A A GK E K+P Sbjct: 75 KVPPTINQFRTALDSQSARQAFKLLDKYRPESTEAKKNRLRARAEARAAGKKEEVTKRPN 134 Query: 437 VVKYGLNHVTYLIEQSKAQLVVIAHDVDPIELVVWL 544 V++G+N +T L+E +AQLV+IAHDV+P+E+V+ L Sbjct: 135 TVRHGVNTITRLVETRRAQLVLIAHDVNPLEIVLHL 170
>RL7A_PIG (Q29375) 60S ribosomal protein L7a (Fragment)| Length = 132 Score = 87.0 bits (214), Expect = 3e-17 Identities = 48/79 (60%), Positives = 58/79 (73%), Gaps = 1/79 (1%) Frame = +2 Query: 311 ATNLFKMLLKYRPEDKVAKKERLLKRAQAEAEGK-TVEAKKPIVVKYGLNHVTYLIEQSK 487 AT L K+ KYRPE K KK+RLL RA+ +A K V K+P V++ G+N VT L+E K Sbjct: 3 ATQLLKVAHKYRPETKQEKKQRLLARAEKKAAXKGDVPTKRPPVLRAGVNTVTTLVENKK 62 Query: 488 AQLVVIAHDVDPIELVVWL 544 AQLVVIAHDVDPIELVV+L Sbjct: 63 AQLVVIAHDVDPIELVVFL 81
>RL7A_AERPE (Q9YAX7) 50S ribosomal protein L7Ae| Length = 127 Score = 40.4 bits (93), Expect = 0.003 Identities = 25/66 (37%), Positives = 33/66 (50%) Frame = +2 Query: 347 PEDKVAKKERLLKRAQAEAEGKTVEAKKPIVVKYGLNHVTYLIEQSKAQLVVIAHDVDPI 526 PED K +KRA+ +K G N T +E+ A+LVVIA DVDP Sbjct: 12 PEDLAEKAYEAVKRARETGR-----------IKKGTNETTKAVERGLAKLVVIAEDVDPP 60 Query: 527 ELVVWL 544 E+V+ L Sbjct: 61 EIVMHL 66
>RL7A_METTH (O26355) 50S ribosomal protein L7Ae| Length = 123 Score = 36.6 bits (83), Expect = 0.047 Identities = 18/35 (51%), Positives = 23/35 (65%) Frame = +2 Query: 440 VKYGLNHVTYLIEQSKAQLVVIAHDVDPIELVVWL 544 V G N VT +E+ AQLV+IA DV+P E+V L Sbjct: 32 VSKGTNEVTKAVERGVAQLVLIAEDVEPAEIVAHL 66
>RL7A_THEAC (Q9HJ56) 50S ribosomal protein L7Ae| Length = 121 Score = 35.4 bits (80), Expect = 0.10 Identities = 18/35 (51%), Positives = 25/35 (71%) Frame = +2 Query: 440 VKYGLNHVTYLIEQSKAQLVVIAHDVDPIELVVWL 544 VK G N V IE+ +++LVVIA DV+P E+V +L Sbjct: 31 VKKGTNEVIKSIERGESKLVVIAEDVNPPEVVYYL 65
>RL7A_THEVO (Q97BK8) 50S ribosomal protein L7Ae| Length = 121 Score = 35.0 bits (79), Expect = 0.14 Identities = 17/35 (48%), Positives = 25/35 (71%) Frame = +2 Query: 440 VKYGLNHVTYLIEQSKAQLVVIAHDVDPIELVVWL 544 +K G N V IE+ +++LVVIA DV+P E+V +L Sbjct: 31 IKKGTNEVIKSIERGESKLVVIAEDVNPPEVVYYL 65
>LAH1_YEAST (P33399) La protein homolog (La ribonucleoprotein) (La autoantigen| homolog) Length = 275 Score = 31.6 bits (70), Expect = 1.5 Identities = 20/69 (28%), Positives = 35/69 (50%) Frame = +2 Query: 323 FKMLLKYRPEDKVAKKERLLKRAQAEAEGKTVEAKKPIVVKYGLNHVTYLIEQSKAQLVV 502 F + KYRP DKV + R + + A+G+ V+ + P+ + N IEQ++ L V Sbjct: 71 FNRMKKYRPVDKVIEALRSSEILEVSADGENVKRRVPLDLTAARN---ARIEQNQRTLAV 127 Query: 503 IAHDVDPIE 529 + + +E Sbjct: 128 MNFPHEDVE 136
>GUNA_BUTFI (P22541) Endoglucanase A precursor (EC 3.2.1.4)| (Endo-1,4-beta-glucanase) (Cellulase) (EGA) Length = 429 Score = 30.4 bits (67), Expect = 3.3 Identities = 13/27 (48%), Positives = 22/27 (81%) Frame = +2 Query: 326 KMLLKYRPEDKVAKKERLLKRAQAEAE 406 K+++K + +D+ AKKE+ LK+A+ EAE Sbjct: 60 KLVIKEKKQDESAKKEQELKKAKEEAE 86
>CHS5_USTMA (O13394) Chitin synthase 5 (EC 2.4.1.16) (Chitin-UDP| acetyl-glucosaminyl transferase 5) (Class-IV chitin synthase 5) Length = 1239 Score = 30.0 bits (66), Expect = 4.4 Identities = 15/37 (40%), Positives = 19/37 (51%) Frame = -3 Query: 191 GGPSWAGGRRRCQIASASSRTADWSPFPFSSSPGQAP 81 G PS AGGR +A A SR + +S P + G P Sbjct: 617 GSPSVAGGRSSASLAPAHSRRSSFSGSPAEGAMGVCP 653
>H1_CHITH (P21895) Histone H1| Length = 231 Score = 30.0 bits (66), Expect = 4.4 Identities = 35/126 (27%), Positives = 45/126 (35%), Gaps = 4/126 (3%) Frame = +2 Query: 80 KAPVPAKKK--TEKVTNPLFEKRPKQFGIGGALPPKKDLHRFVKWPXXXXXXXXXXXXXX 253 K P AKK+ +KVT + EK+PK+ KK K P Sbjct: 109 KLPAAAKKEKVVKKVTKKVTEKKPKKAVSKPKTGEKKVKKTIAKKPKVASATKIKKPVAK 168 Query: 254 XXXXPPALHQFTRTLDKNLATNLFKMLLKYRPEDKVAKKERLL--KRAQAEAEGKTVEAK 427 P A + K A K P+ KVAK ++ K + AE K AK Sbjct: 169 TTKKPAAAKPTKKVAAKPKAA----PKPKAAPKPKVAKPKKAAAPKAKKPAAEKKPKAAK 224 Query: 428 KPIVVK 445 KP K Sbjct: 225 KPSAKK 230
>HSDR_STAAC (Q5HJH8) Type-1 restriction enzyme R protein (EC 3.1.21.3) (Type I| restriction enzyme R protein) Length = 929 Score = 29.6 bits (65), Expect = 5.7 Identities = 21/58 (36%), Positives = 26/58 (44%) Frame = +2 Query: 32 PLTSTAAGEMAPKRGGKAPVPAKKKTEKVTNPLFEKRPKQFGIGGALPPKKDLHRFVK 205 PL T +MA G AP+ + KT KV + E QFG D+HR VK Sbjct: 337 PLIVTTIQKMAKAIQGNAPLLEQYKTNKVVFIIDECHRSQFG---------DMHRLVK 385
>MAGC2_HUMAN (Q9UBF1) Melanoma-associated antigen C2 (MAGE-C2 antigen) (MAGE-E1| antigen) (Hepatocellular carcinoma-associated antigen 587) (Cancer-testis antigen 10) (CT10) Length = 373 Score = 29.6 bits (65), Expect = 5.7 Identities = 15/39 (38%), Positives = 23/39 (58%) Frame = +2 Query: 266 PPALHQFTRTLDKNLATNLFKMLLKYRPEDKVAKKERLL 382 P + FT TLD+ +A + +LLKY E+ V + E L+ Sbjct: 131 PDSESSFTYTLDEKVAELVEFLLLKYEAEEPVTEAEMLM 169
>C78A1_MAIZE (P48420) Cytochrome P450 78A1 (EC 1.14.-.-) (CYPLXXVIII)| Length = 547 Score = 29.3 bits (64), Expect = 7.5 Identities = 19/53 (35%), Positives = 24/53 (45%), Gaps = 2/53 (3%) Frame = -3 Query: 212 WAT*RSGGGPSWAGGRRRCQIASASSRTADWSPF--PFSSSPGQAPCRLA*EP 60 WAT S GGP+W GR AS+ W P P S++ + P A P Sbjct: 52 WAT--SPGGPAWTNGR------GASASLLSWDPVVCPCSAASSRCPGAAAPRP 96
>EFTS_SYMTH (Q67PB6) Elongation factor Ts (EF-Ts)| Length = 304 Score = 28.9 bits (63), Expect = 9.7 Identities = 22/60 (36%), Positives = 30/60 (50%), Gaps = 4/60 (6%) Frame = +2 Query: 272 ALHQFTRTLDKNLATNLFKMLLKY-RPED---KVAKKERLLKRAQAEAEGKTVEAKKPIV 439 A H L LA + M +Y RPED +V + ER + +AQA EGK E + +V Sbjct: 172 AAHPEVEALCHELALQIASMRAQYVRPEDVPAQVIEHEREILKAQAINEGKKPEIAEKMV 231
>BSL1_ARATH (Q8L7U5) Serine/threonine-protein phosphatase BSL1 (EC 3.1.3.16)| (BSU1-like protein 1) Length = 881 Score = 28.9 bits (63), Expect = 9.7 Identities = 13/37 (35%), Positives = 23/37 (62%) Frame = +2 Query: 404 EGKTVEAKKPIVVKYGLNHVTYLIEQSKAQLVVIAHD 514 EG A+ P +V +G + VT +++K QL++ AH+ Sbjct: 747 EGLRPNARGPGLVTFGPDRVTEFCKRNKLQLIIRAHE 783
>RL35_YEAST (P39741) 60S ribosomal protein L35| Length = 120 Score = 28.9 bits (63), Expect = 9.7 Identities = 14/31 (45%), Positives = 19/31 (61%) Frame = +2 Query: 338 KYRPEDKVAKKERLLKRAQAEAEGKTVEAKK 430 KY+P+D AKK R L+RA + E V K+ Sbjct: 74 KYQPKDLRAKKTRALRRALTKFEASQVTEKQ 104
>SDC3_CAEEL (P34706) Zinc finger protein sdc-3| Length = 2150 Score = 28.9 bits (63), Expect = 9.7 Identities = 30/116 (25%), Positives = 43/116 (37%) Frame = +2 Query: 101 KKTEKVTNPLFEKRPKQFGIGGALPPKKDLHRFVKWPXXXXXXXXXXXXXXXXXXPPALH 280 K EK+ EK F + +LP FVK+P +L Sbjct: 621 KMREKIREYNKEKEKHPFYVSSSLPEFASTSDFVKFPISNTGIKYTAPRRNQPKVQRSLV 680 Query: 281 QFTRTLDKNLATNLFKMLLKYRPEDKVAKKERLLKRAQAEAEGKTVEAKKPIVVKY 448 +TR L F PE+K+ +K RLL++ E E ++A VKY Sbjct: 681 TYTRFRLAELEDKDFSF-----PEEKMLEKNRLLEKLNFE-ERLQLDALMSKDVKY 730 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 67,448,392 Number of Sequences: 219361 Number of extensions: 1255310 Number of successful extensions: 4956 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 4703 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4924 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4315578075 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
