ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | baal23a21 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_470280.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1482 Score = 517 bits (261), Expect = e-143 Identities = 513/597 (85%) Strand = Plus / Plus Query: 9 caaggagctcacgcaaggagaggtgccgaactcaggcgccgcttctgcctggccttcctg 68 |||||||||||| ||| |||||||||||||||||||| || ||||| ||||||||||||| Sbjct: 356 caaggagctcacacaaagagaggtgccgaactcaggcaccacttctacctggccttcctg 415 Query: 69 atgacctggctatttcatgtctgatgcgggtttctcgagccgagcaccctaatcttcgtt 128 | ||||| |||||| | || || |||||||| ||||| |||||| | |||||||| | Sbjct: 416 acgacctagctattacctgcctcatgcgggtccctcgacttgagcacacaaatcttcggt 475 Query: 129 tggtctgtagaaaatggagccgacttttatctgggaattactattactcgctgcggaaga 188 | ||||||| | |||| |||||| ||||||||||| || ||||| || |||| |||| Sbjct: 476 tagtctgtaaacggtggaaccgactgttatctgggaactattattattccttgcgtaaga 535 Query: 189 aatttggcatggcagaagaatgggtttacgtcttcaaaagggatcgtgatcagaaactat 248 || |||||||||||||||||||||||| |||||||||||||| ||||||| ||| | | Sbjct: 536 aacttggcatggcagaagaatgggtttttgtcttcaaaagggaccgtgatcggaagattt 595 Query: 249 cttggcatgcctttgatccagtgcaccagctctggaggtcgcttcctcccgttccaccag 308 |||||||||||||||| ||||| |||||| | |||| ||| || ||||| |||||| ||| Sbjct: 596 cttggcatgcctttgacccagttcaccaggtgtggaagtcactccctccagttccagcag 655 Query: 309 agtattcagaagctgtgggctttggttgcgctgttctcagtggctgctatttgtacttat 368 |||||||||| || ||||||||||| || |||||||| |||||||||||| ||||| | | Sbjct: 656 agtattcagaggccgtgggctttggctgtgctgttcttagtggctgctatctgtacctgt 715 Query: 369 ttggaggcaaagacccagtacgagggtctatgaggcatgtcgtgttttacaatactcgga 428 |||| |||||||||||||| |||||||||||||||| ||| || ||||||||| |||||| Sbjct: 716 ttggtggcaaagacccagtccgagggtctatgaggcgtgttgtattttacaatgctcgga 775 Query: 429 caaacaagtggtaccgggctccagatatgctacggaagcggcacttatttggctcttgtg 488 |||||||||| ||| || ||||||||||||| ||||| |||| ||||| || |||| Sbjct: 776 taaacaagtggctccgagccccagatatgctacaaaagcgtcactgctttggttcctgtg 835 Query: 489 tcataaacaactgcctctatgttgccggtggggagtgtgaagggatacagagaactctaa 548 ||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 836 tcataaacaaccgcctctatgttgctggtggggagtgtgaagggatacaaagaactctaa 895 Query: 549 gatctgctgaggtttacaatccgaacaggaatagatggtcttgcatcagtgaaatga 605 |||||||||| ||||| | || ||||||||||||||||||| |||||||||||||| Sbjct: 896 gatctgctgaattttacgacccaaacaggaatagatggtcttacatcagtgaaatga 952
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 517 bits (261), Expect = e-143 Identities = 513/597 (85%) Strand = Plus / Plus Query: 9 caaggagctcacgcaaggagaggtgccgaactcaggcgccgcttctgcctggccttcctg 68 |||||||||||| ||| |||||||||||||||||||| || ||||| ||||||||||||| Sbjct: 3649756 caaggagctcacacaaagagaggtgccgaactcaggcaccacttctacctggccttcctg 3649815 Query: 69 atgacctggctatttcatgtctgatgcgggtttctcgagccgagcaccctaatcttcgtt 128 | ||||| |||||| | || || |||||||| ||||| |||||| | |||||||| | Sbjct: 3649816 acgacctagctattacctgcctcatgcgggtccctcgacttgagcacacaaatcttcggt 3649875 Query: 129 tggtctgtagaaaatggagccgacttttatctgggaattactattactcgctgcggaaga 188 | ||||||| | |||| |||||| ||||||||||| || ||||| || |||| |||| Sbjct: 3649876 tagtctgtaaacggtggaaccgactgttatctgggaactattattattccttgcgtaaga 3649935 Query: 189 aatttggcatggcagaagaatgggtttacgtcttcaaaagggatcgtgatcagaaactat 248 || |||||||||||||||||||||||| |||||||||||||| ||||||| ||| | | Sbjct: 3649936 aacttggcatggcagaagaatgggtttttgtcttcaaaagggaccgtgatcggaagattt 3649995 Query: 249 cttggcatgcctttgatccagtgcaccagctctggaggtcgcttcctcccgttccaccag 308 |||||||||||||||| ||||| |||||| | |||| ||| || ||||| |||||| ||| Sbjct: 3649996 cttggcatgcctttgacccagttcaccaggtgtggaagtcactccctccagttccagcag 3650055 Query: 309 agtattcagaagctgtgggctttggttgcgctgttctcagtggctgctatttgtacttat 368 |||||||||| || ||||||||||| || |||||||| |||||||||||| ||||| | | Sbjct: 3650056 agtattcagaggccgtgggctttggctgtgctgttcttagtggctgctatctgtacctgt 3650115 Query: 369 ttggaggcaaagacccagtacgagggtctatgaggcatgtcgtgttttacaatactcgga 428 |||| |||||||||||||| |||||||||||||||| ||| || ||||||||| |||||| Sbjct: 3650116 ttggtggcaaagacccagtccgagggtctatgaggcgtgttgtattttacaatgctcgga 3650175 Query: 429 caaacaagtggtaccgggctccagatatgctacggaagcggcacttatttggctcttgtg 488 |||||||||| ||| || ||||||||||||| ||||| |||| ||||| || |||| Sbjct: 3650176 taaacaagtggctccgagccccagatatgctacaaaagcgtcactgctttggttcctgtg 3650235 Query: 489 tcataaacaactgcctctatgttgccggtggggagtgtgaagggatacagagaactctaa 548 ||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 3650236 tcataaacaaccgcctctatgttgctggtggggagtgtgaagggatacaaagaactctaa 3650295 Query: 549 gatctgctgaggtttacaatccgaacaggaatagatggtcttgcatcagtgaaatga 605 |||||||||| ||||| | || ||||||||||||||||||| |||||||||||||| Sbjct: 3650296 gatctgctgaattttacgacccaaacaggaatagatggtcttacatcagtgaaatga 3650352 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 248 tcttggcatgcctttgatcc 267 |||||||||||||||||||| Sbjct: 9656463 tcttggcatgcctttgatcc 9656482
>gb|AC073556.11| Oryza sativa chromosome 3 BAC OSJNBa0091P11 genomic sequence, complete sequence Length = 160738 Score = 517 bits (261), Expect = e-143 Identities = 513/597 (85%) Strand = Plus / Minus Query: 9 caaggagctcacgcaaggagaggtgccgaactcaggcgccgcttctgcctggccttcctg 68 |||||||||||| ||| |||||||||||||||||||| || ||||| ||||||||||||| Sbjct: 131621 caaggagctcacacaaagagaggtgccgaactcaggcaccacttctacctggccttcctg 131562 Query: 69 atgacctggctatttcatgtctgatgcgggtttctcgagccgagcaccctaatcttcgtt 128 | ||||| |||||| | || || |||||||| ||||| |||||| | |||||||| | Sbjct: 131561 acgacctagctattacctgcctcatgcgggtccctcgacttgagcacacaaatcttcggt 131502 Query: 129 tggtctgtagaaaatggagccgacttttatctgggaattactattactcgctgcggaaga 188 | ||||||| | |||| |||||| ||||||||||| || ||||| || |||| |||| Sbjct: 131501 tagtctgtaaacggtggaaccgactgttatctgggaactattattattccttgcgtaaga 131442 Query: 189 aatttggcatggcagaagaatgggtttacgtcttcaaaagggatcgtgatcagaaactat 248 || |||||||||||||||||||||||| |||||||||||||| ||||||| ||| | | Sbjct: 131441 aacttggcatggcagaagaatgggtttttgtcttcaaaagggaccgtgatcggaagattt 131382 Query: 249 cttggcatgcctttgatccagtgcaccagctctggaggtcgcttcctcccgttccaccag 308 |||||||||||||||| ||||| |||||| | |||| ||| || ||||| |||||| ||| Sbjct: 131381 cttggcatgcctttgacccagttcaccaggtgtggaagtcactccctccagttccagcag 131322 Query: 309 agtattcagaagctgtgggctttggttgcgctgttctcagtggctgctatttgtacttat 368 |||||||||| || ||||||||||| || |||||||| |||||||||||| ||||| | | Sbjct: 131321 agtattcagaggccgtgggctttggctgtgctgttcttagtggctgctatctgtacctgt 131262 Query: 369 ttggaggcaaagacccagtacgagggtctatgaggcatgtcgtgttttacaatactcgga 428 |||| |||||||||||||| |||||||||||||||| ||| || ||||||||| |||||| Sbjct: 131261 ttggtggcaaagacccagtccgagggtctatgaggcgtgttgtattttacaatgctcgga 131202 Query: 429 caaacaagtggtaccgggctccagatatgctacggaagcggcacttatttggctcttgtg 488 |||||||||| ||| || ||||||||||||| ||||| |||| ||||| || |||| Sbjct: 131201 taaacaagtggctccgagccccagatatgctacaaaagcgtcactgctttggttcctgtg 131142 Query: 489 tcataaacaactgcctctatgttgccggtggggagtgtgaagggatacagagaactctaa 548 ||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 131141 tcataaacaaccgcctctatgttgctggtggggagtgtgaagggatacaaagaactctaa 131082 Query: 549 gatctgctgaggtttacaatccgaacaggaatagatggtcttgcatcagtgaaatga 605 |||||||||| ||||| | || ||||||||||||||||||| |||||||||||||| Sbjct: 131081 gatctgctgaattttacgacccaaacaggaatagatggtcttacatcagtgaaatga 131025
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 517 bits (261), Expect = e-143 Identities = 513/597 (85%) Strand = Plus / Plus Query: 9 caaggagctcacgcaaggagaggtgccgaactcaggcgccgcttctgcctggccttcctg 68 |||||||||||| ||| |||||||||||||||||||| || ||||| ||||||||||||| Sbjct: 3649867 caaggagctcacacaaagagaggtgccgaactcaggcaccacttctacctggccttcctg 3649926 Query: 69 atgacctggctatttcatgtctgatgcgggtttctcgagccgagcaccctaatcttcgtt 128 | ||||| |||||| | || || |||||||| ||||| |||||| | |||||||| | Sbjct: 3649927 acgacctagctattacctgcctcatgcgggtccctcgacttgagcacacaaatcttcggt 3649986 Query: 129 tggtctgtagaaaatggagccgacttttatctgggaattactattactcgctgcggaaga 188 | ||||||| | |||| |||||| ||||||||||| || ||||| || |||| |||| Sbjct: 3649987 tagtctgtaaacggtggaaccgactgttatctgggaactattattattccttgcgtaaga 3650046 Query: 189 aatttggcatggcagaagaatgggtttacgtcttcaaaagggatcgtgatcagaaactat 248 || |||||||||||||||||||||||| |||||||||||||| ||||||| ||| | | Sbjct: 3650047 aacttggcatggcagaagaatgggtttttgtcttcaaaagggaccgtgatcggaagattt 3650106 Query: 249 cttggcatgcctttgatccagtgcaccagctctggaggtcgcttcctcccgttccaccag 308 |||||||||||||||| ||||| |||||| | |||| ||| || ||||| |||||| ||| Sbjct: 3650107 cttggcatgcctttgacccagttcaccaggtgtggaagtcactccctccagttccagcag 3650166 Query: 309 agtattcagaagctgtgggctttggttgcgctgttctcagtggctgctatttgtacttat 368 |||||||||| || ||||||||||| || |||||||| |||||||||||| ||||| | | Sbjct: 3650167 agtattcagaggccgtgggctttggctgtgctgttcttagtggctgctatctgtacctgt 3650226 Query: 369 ttggaggcaaagacccagtacgagggtctatgaggcatgtcgtgttttacaatactcgga 428 |||| |||||||||||||| |||||||||||||||| ||| || ||||||||| |||||| Sbjct: 3650227 ttggtggcaaagacccagtccgagggtctatgaggcgtgttgtattttacaatgctcgga 3650286 Query: 429 caaacaagtggtaccgggctccagatatgctacggaagcggcacttatttggctcttgtg 488 |||||||||| ||| || ||||||||||||| ||||| |||| ||||| || |||| Sbjct: 3650287 taaacaagtggctccgagccccagatatgctacaaaagcgtcactgctttggttcctgtg 3650346 Query: 489 tcataaacaactgcctctatgttgccggtggggagtgtgaagggatacagagaactctaa 548 ||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 3650347 tcataaacaaccgcctctatgttgctggtggggagtgtgaagggatacaaagaactctaa 3650406 Query: 549 gatctgctgaggtttacaatccgaacaggaatagatggtcttgcatcagtgaaatga 605 |||||||||| ||||| | || ||||||||||||||||||| |||||||||||||| Sbjct: 3650407 gatctgctgaattttacgacccaaacaggaatagatggtcttacatcagtgaaatga 3650463 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 248 tcttggcatgcctttgatcc 267 |||||||||||||||||||| Sbjct: 9654584 tcttggcatgcctttgatcc 9654603
>dbj|AK121310.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023112E08, full insert sequence Length = 2085 Score = 517 bits (261), Expect = e-143 Identities = 513/597 (85%) Strand = Plus / Plus Query: 9 caaggagctcacgcaaggagaggtgccgaactcaggcgccgcttctgcctggccttcctg 68 |||||||||||| ||| |||||||||||||||||||| || ||||| ||||||||||||| Sbjct: 419 caaggagctcacacaaagagaggtgccgaactcaggcaccacttctacctggccttcctg 478 Query: 69 atgacctggctatttcatgtctgatgcgggtttctcgagccgagcaccctaatcttcgtt 128 | ||||| |||||| | || || |||||||| ||||| |||||| | |||||||| | Sbjct: 479 acgacctagctattacctgcctcatgcgggtccctcgacttgagcacacaaatcttcggt 538 Query: 129 tggtctgtagaaaatggagccgacttttatctgggaattactattactcgctgcggaaga 188 | ||||||| | |||| |||||| ||||||||||| || ||||| || |||| |||| Sbjct: 539 tagtctgtaaacggtggaaccgactgttatctgggaactattattattccttgcgtaaga 598 Query: 189 aatttggcatggcagaagaatgggtttacgtcttcaaaagggatcgtgatcagaaactat 248 || |||||||||||||||||||||||| |||||||||||||| ||||||| ||| | | Sbjct: 599 aacttggcatggcagaagaatgggtttttgtcttcaaaagggaccgtgatcggaagattt 658 Query: 249 cttggcatgcctttgatccagtgcaccagctctggaggtcgcttcctcccgttccaccag 308 |||||||||||||||| ||||| |||||| | |||| ||| || ||||| |||||| ||| Sbjct: 659 cttggcatgcctttgacccagttcaccaggtgtggaagtcactccctccagttccagcag 718 Query: 309 agtattcagaagctgtgggctttggttgcgctgttctcagtggctgctatttgtacttat 368 |||||||||| || ||||||||||| || |||||||| |||||||||||| ||||| | | Sbjct: 719 agtattcagaggccgtgggctttggctgtgctgttcttagtggctgctatctgtacctgt 778 Query: 369 ttggaggcaaagacccagtacgagggtctatgaggcatgtcgtgttttacaatactcgga 428 |||| |||||||||||||| |||||||||||||||| ||| || ||||||||| |||||| Sbjct: 779 ttggtggcaaagacccagtccgagggtctatgaggcgtgttgtattttacaatgctcgga 838 Query: 429 caaacaagtggtaccgggctccagatatgctacggaagcggcacttatttggctcttgtg 488 |||||||||| ||| || ||||||||||||| ||||| |||| ||||| || |||| Sbjct: 839 taaacaagtggctccgagccccagatatgctacaaaagcgtcactgctttggttcctgtg 898 Query: 489 tcataaacaactgcctctatgttgccggtggggagtgtgaagggatacagagaactctaa 548 ||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 899 tcataaacaaccgcctctatgttgctggtggggagtgtgaagggatacaaagaactctaa 958 Query: 549 gatctgctgaggtttacaatccgaacaggaatagatggtcttgcatcagtgaaatga 605 |||||||||| ||||| | || ||||||||||||||||||| |||||||||||||| Sbjct: 959 gatctgctgaattttacgacccaaacaggaatagatggtcttacatcagtgaaatga 1015
>dbj|AK071501.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023093H18, full insert sequence Length = 1686 Score = 517 bits (261), Expect = e-143 Identities = 513/597 (85%) Strand = Plus / Plus Query: 9 caaggagctcacgcaaggagaggtgccgaactcaggcgccgcttctgcctggccttcctg 68 |||||||||||| ||| |||||||||||||||||||| || ||||| ||||||||||||| Sbjct: 489 caaggagctcacacaaagagaggtgccgaactcaggcaccacttctacctggccttcctg 548 Query: 69 atgacctggctatttcatgtctgatgcgggtttctcgagccgagcaccctaatcttcgtt 128 | ||||| |||||| | || || |||||||| ||||| |||||| | |||||||| | Sbjct: 549 acgacctagctattacctgcctcatgcgggtccctcgacttgagcacacaaatcttcggt 608 Query: 129 tggtctgtagaaaatggagccgacttttatctgggaattactattactcgctgcggaaga 188 | ||||||| | |||| |||||| ||||||||||| || ||||| || |||| |||| Sbjct: 609 tagtctgtaaacggtggaaccgactgttatctgggaactattattattccttgcgtaaga 668 Query: 189 aatttggcatggcagaagaatgggtttacgtcttcaaaagggatcgtgatcagaaactat 248 || |||||||||||||||||||||||| |||||||||||||| ||||||| ||| | | Sbjct: 669 aacttggcatggcagaagaatgggtttttgtcttcaaaagggaccgtgatcggaagattt 728 Query: 249 cttggcatgcctttgatccagtgcaccagctctggaggtcgcttcctcccgttccaccag 308 |||||||||||||||| ||||| |||||| | |||| ||| || ||||| |||||| ||| Sbjct: 729 cttggcatgcctttgacccagttcaccaggtgtggaagtcactccctccagttccagcag 788 Query: 309 agtattcagaagctgtgggctttggttgcgctgttctcagtggctgctatttgtacttat 368 |||||||||| || ||||||||||| || |||||||| |||||||||||| ||||| | | Sbjct: 789 agtattcagaggccgtgggctttggctgtgctgttcttagtggctgctatctgtacctgt 848 Query: 369 ttggaggcaaagacccagtacgagggtctatgaggcatgtcgtgttttacaatactcgga 428 |||| |||||||||||||| |||||||||||||||| ||| || ||||||||| |||||| Sbjct: 849 ttggtggcaaagacccagtccgagggtctatgaggcgtgttgtattttacaatgctcgga 908 Query: 429 caaacaagtggtaccgggctccagatatgctacggaagcggcacttatttggctcttgtg 488 |||||||||| ||| || ||||||||||||| ||||| |||| ||||| || |||| Sbjct: 909 taaacaagtggctccgagccccagatatgctacaaaagcgtcactgctttggttcctgtg 968 Query: 489 tcataaacaactgcctctatgttgccggtggggagtgtgaagggatacagagaactctaa 548 ||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 969 tcataaacaaccgcctctatgttgctggtggggagtgtgaagggatacaaagaactctaa 1028 Query: 549 gatctgctgaggtttacaatccgaacaggaatagatggtcttgcatcagtgaaatga 605 |||||||||| ||||| | || ||||||||||||||||||| |||||||||||||| Sbjct: 1029 gatctgctgaattttacgacccaaacaggaatagatggtcttacatcagtgaaatga 1085
>ref|NM_196447.1| Oryza sativa (japonica cultivar-group) unknown protein (OSJNBa0015J03.3), mRNA Length = 1329 Score = 307 bits (155), Expect = 2e-80 Identities = 440/535 (82%) Strand = Plus / Plus Query: 3 gcaaaacaaggagctcacgcaaggagaggtgccgaactcaggcgccgcttctgcctggcc 62 ||||| ||||| |||| || ||||||||| |||||||||| || || ||| ||||||| | Sbjct: 197 gcaaatcaaggggctctcgtaaggagaggagccgaactcaagcaccacttttgcctggtc 256 Query: 63 ttcctgatgacctggctatttcatgtctgatgcgggtttctcgagccgagcaccctaatc 122 ||||||||||||| |||||| | ||||| || |||||| |||||| || || || |||| Sbjct: 257 ttcctgatgaccttgctattgcttgtctcatacgggttcctcgagtggaacatcccaatc 316 Query: 123 ttcgtttggtctgtagaaaatggagccgacttttatctgggaattactattactcgctgc 182 |||| | || || | || ||||| ||| || |||||||||||||||||||| || ||| Sbjct: 317 ttcggatagtttgcaaaagatggaaccgtctcttatctgggaattactattattccttgc 376 Query: 183 ggaagaaatttggcatggcagaagaatgggtttacgtcttcaaaagggatcgtgatcaga 242 | |||| | || ||||| |||||||||||||| ||||| |||||||| ||||| | Sbjct: 377 gcaagagaaacgggatggcggaagaatgggtttatgtctttaaaagggaccgtgaaggaa 436 Query: 243 aactatcttggcatgcctttgatccagtgcaccagctctggaggtcgcttcctcccgttc 302 | |||| |||||||||||||| ||| |||||||||| |||| ||| ||||| || |||| Sbjct: 437 agatatcctggcatgcctttgacccactgcaccagctatggaagtcacttccaccagttc 496 Query: 303 caccagagtattcagaagctgtgggctttggttgcgctgttctcagtggctgctatttgt 362 || |||| ||||||||||| | |||||||| || |||||||| ||||| |||||| ||| Sbjct: 497 cagcagaatattcagaagcattaggctttggctgtgctgttctgagtggttgctatctgt 556 Query: 363 acttatttggaggcaaagacccagtacgagggtctatgaggcatgtcgtgttttacaata 422 |||||||||| || || || || | | || |||||||||| ||| || ||||||||| Sbjct: 557 acttatttggcggtaaggatcctctgaggggctctatgaggcgtgttgtattttacaatg 616 Query: 423 ctcggacaaacaagtggtaccgggctccagatatgctacggaagcggcacttatttggct 482 ||||||||||||| ||| |||| |||||||||||| ||||||| || ||||| ||||| | Sbjct: 617 ctcggacaaacaaatggcaccgagctccagatatgttacggaaacgacacttttttggtt 676 Query: 483 cttgtgtcataaacaactgcctctatgttgccggtggggagtgtgaagggataca 537 |||||||||||||||| ||| | |||||||| ||||||||||||||||| ||||| Sbjct: 677 cttgtgtcataaacaattgcttgtatgttgctggtggggagtgtgaaggaataca 731
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 307 bits (155), Expect = 2e-80 Identities = 440/535 (82%) Strand = Plus / Minus Query: 3 gcaaaacaaggagctcacgcaaggagaggtgccgaactcaggcgccgcttctgcctggcc 62 ||||| ||||| |||| || ||||||||| |||||||||| || || ||| ||||||| | Sbjct: 13714636 gcaaatcaaggggctctcgtaaggagaggagccgaactcaagcaccacttttgcctggtc 13714577 Query: 63 ttcctgatgacctggctatttcatgtctgatgcgggtttctcgagccgagcaccctaatc 122 ||||||||||||| |||||| | ||||| || |||||| |||||| || || || |||| Sbjct: 13714576 ttcctgatgaccttgctattgcttgtctcatacgggttcctcgagtggaacatcccaatc 13714517 Query: 123 ttcgtttggtctgtagaaaatggagccgacttttatctgggaattactattactcgctgc 182 |||| | || || | || ||||| ||| || |||||||||||||||||||| || ||| Sbjct: 13714516 ttcggatagtttgcaaaagatggaaccgtctcttatctgggaattactattattccttgc 13714457 Query: 183 ggaagaaatttggcatggcagaagaatgggtttacgtcttcaaaagggatcgtgatcaga 242 | |||| | || ||||| |||||||||||||| ||||| |||||||| ||||| | Sbjct: 13714456 gcaagagaaacgggatggcggaagaatgggtttatgtctttaaaagggaccgtgaaggaa 13714397 Query: 243 aactatcttggcatgcctttgatccagtgcaccagctctggaggtcgcttcctcccgttc 302 | |||| |||||||||||||| ||| |||||||||| |||| ||| ||||| || |||| Sbjct: 13714396 agatatcctggcatgcctttgacccactgcaccagctatggaagtcacttccaccagttc 13714337 Query: 303 caccagagtattcagaagctgtgggctttggttgcgctgttctcagtggctgctatttgt 362 || |||| ||||||||||| | |||||||| || |||||||| ||||| |||||| ||| Sbjct: 13714336 cagcagaatattcagaagcattaggctttggctgtgctgttctgagtggttgctatctgt 13714277 Query: 363 acttatttggaggcaaagacccagtacgagggtctatgaggcatgtcgtgttttacaata 422 |||||||||| || || || || | | || |||||||||| ||| || ||||||||| Sbjct: 13714276 acttatttggcggtaaggatcctctgaggggctctatgaggcgtgttgtattttacaatg 13714217 Query: 423 ctcggacaaacaagtggtaccgggctccagatatgctacggaagcggcacttatttggct 482 ||||||||||||| ||| |||| |||||||||||| ||||||| || ||||| ||||| | Sbjct: 13714216 ctcggacaaacaaatggcaccgagctccagatatgttacggaaacgacacttttttggtt 13714157 Query: 483 cttgtgtcataaacaactgcctctatgttgccggtggggagtgtgaagggataca 537 |||||||||||||||| ||| | |||||||| ||||||||||||||||| ||||| Sbjct: 13714156 cttgtgtcataaacaattgcttgtatgttgctggtggggagtgtgaaggaataca 13714102
>gb|AC027659.1| Oryza sativa (japonica cultivar-group) BAC nbxb0015J03 chromosome 10, complete sequence Length = 172742 Score = 307 bits (155), Expect = 2e-80 Identities = 440/535 (82%) Strand = Plus / Minus Query: 3 gcaaaacaaggagctcacgcaaggagaggtgccgaactcaggcgccgcttctgcctggcc 62 ||||| ||||| |||| || ||||||||| |||||||||| || || ||| ||||||| | Sbjct: 41165 gcaaatcaaggggctctcgtaaggagaggagccgaactcaagcaccacttttgcctggtc 41106 Query: 63 ttcctgatgacctggctatttcatgtctgatgcgggtttctcgagccgagcaccctaatc 122 ||||||||||||| |||||| | ||||| || |||||| |||||| || || || |||| Sbjct: 41105 ttcctgatgaccttgctattgcttgtctcatacgggttcctcgagtggaacatcccaatc 41046 Query: 123 ttcgtttggtctgtagaaaatggagccgacttttatctgggaattactattactcgctgc 182 |||| | || || | || ||||| ||| || |||||||||||||||||||| || ||| Sbjct: 41045 ttcggatagtttgcaaaagatggaaccgtctcttatctgggaattactattattccttgc 40986 Query: 183 ggaagaaatttggcatggcagaagaatgggtttacgtcttcaaaagggatcgtgatcaga 242 | |||| | || ||||| |||||||||||||| ||||| |||||||| ||||| | Sbjct: 40985 gcaagagaaacgggatggcggaagaatgggtttatgtctttaaaagggaccgtgaaggaa 40926 Query: 243 aactatcttggcatgcctttgatccagtgcaccagctctggaggtcgcttcctcccgttc 302 | |||| |||||||||||||| ||| |||||||||| |||| ||| ||||| || |||| Sbjct: 40925 agatatcctggcatgcctttgacccactgcaccagctatggaagtcacttccaccagttc 40866 Query: 303 caccagagtattcagaagctgtgggctttggttgcgctgttctcagtggctgctatttgt 362 || |||| ||||||||||| | |||||||| || |||||||| ||||| |||||| ||| Sbjct: 40865 cagcagaatattcagaagcattaggctttggctgtgctgttctgagtggttgctatctgt 40806 Query: 363 acttatttggaggcaaagacccagtacgagggtctatgaggcatgtcgtgttttacaata 422 |||||||||| || || || || | | || |||||||||| ||| || ||||||||| Sbjct: 40805 acttatttggcggtaaggatcctctgaggggctctatgaggcgtgttgtattttacaatg 40746 Query: 423 ctcggacaaacaagtggtaccgggctccagatatgctacggaagcggcacttatttggct 482 ||||||||||||| ||| |||| |||||||||||| ||||||| || ||||| ||||| | Sbjct: 40745 ctcggacaaacaaatggcaccgagctccagatatgttacggaaacgacacttttttggtt 40686 Query: 483 cttgtgtcataaacaactgcctctatgttgccggtggggagtgtgaagggataca 537 |||||||||||||||| ||| | |||||||| ||||||||||||||||| ||||| Sbjct: 40685 cttgtgtcataaacaattgcttgtatgttgctggtggggagtgtgaaggaataca 40631
>dbj|AK068671.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013158J20, full insert sequence Length = 2094 Score = 307 bits (155), Expect = 2e-80 Identities = 440/535 (82%) Strand = Plus / Plus Query: 3 gcaaaacaaggagctcacgcaaggagaggtgccgaactcaggcgccgcttctgcctggcc 62 ||||| ||||| |||| || ||||||||| |||||||||| || || ||| ||||||| | Sbjct: 288 gcaaatcaaggggctctcgtaaggagaggagccgaactcaagcaccacttttgcctggtc 347 Query: 63 ttcctgatgacctggctatttcatgtctgatgcgggtttctcgagccgagcaccctaatc 122 ||||||||||||| |||||| | ||||| || |||||| |||||| || || || |||| Sbjct: 348 ttcctgatgaccttgctattgcttgtctcatacgggttcctcgagtggaacatcccaatc 407 Query: 123 ttcgtttggtctgtagaaaatggagccgacttttatctgggaattactattactcgctgc 182 |||| | || || | || ||||| ||| || |||||||||||||||||||| || ||| Sbjct: 408 ttcggatagtttgcaaaagatggaaccgtctcttatctgggaattactattattccttgc 467 Query: 183 ggaagaaatttggcatggcagaagaatgggtttacgtcttcaaaagggatcgtgatcaga 242 | |||| | || ||||| |||||||||||||| ||||| |||||||| ||||| | Sbjct: 468 gcaagagaaacgggatggcggaagaatgggtttatgtctttaaaagggaccgtgaaggaa 527 Query: 243 aactatcttggcatgcctttgatccagtgcaccagctctggaggtcgcttcctcccgttc 302 | |||| |||||||||||||| ||| |||||||||| |||| ||| ||||| || |||| Sbjct: 528 agatatcctggcatgcctttgacccactgcaccagctatggaagtcacttccaccagttc 587 Query: 303 caccagagtattcagaagctgtgggctttggttgcgctgttctcagtggctgctatttgt 362 || |||| ||||||||||| | |||||||| || |||||||| ||||| |||||| ||| Sbjct: 588 cagcagaatattcagaagcattaggctttggctgtgctgttctgagtggttgctatctgt 647 Query: 363 acttatttggaggcaaagacccagtacgagggtctatgaggcatgtcgtgttttacaata 422 |||||||||| || || || || | | || |||||||||| ||| || ||||||||| Sbjct: 648 acttatttggcggtaaggatcctctgaggggctctatgaggcgtgttgtattttacaatg 707 Query: 423 ctcggacaaacaagtggtaccgggctccagatatgctacggaagcggcacttatttggct 482 ||||||||||||| ||| |||| |||||||||||| ||||||| || ||||| ||||| | Sbjct: 708 ctcggacaaacaaatggcaccgagctccagatatgttacggaaacgacacttttttggtt 767 Query: 483 cttgtgtcataaacaactgcctctatgttgccggtggggagtgtgaagggataca 537 |||||||||||||||| ||| | |||||||| ||||||||||||||||| ||||| Sbjct: 768 cttgtgtcataaacaattgcttgtatgttgctggtggggagtgtgaaggaataca 822
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 307 bits (155), Expect = 2e-80 Identities = 440/535 (82%) Strand = Plus / Minus Query: 3 gcaaaacaaggagctcacgcaaggagaggtgccgaactcaggcgccgcttctgcctggcc 62 ||||| ||||| |||| || ||||||||| |||||||||| || || ||| ||||||| | Sbjct: 13721978 gcaaatcaaggggctctcgtaaggagaggagccgaactcaagcaccacttttgcctggtc 13721919 Query: 63 ttcctgatgacctggctatttcatgtctgatgcgggtttctcgagccgagcaccctaatc 122 ||||||||||||| |||||| | ||||| || |||||| |||||| || || || |||| Sbjct: 13721918 ttcctgatgaccttgctattgcttgtctcatacgggttcctcgagtggaacatcccaatc 13721859 Query: 123 ttcgtttggtctgtagaaaatggagccgacttttatctgggaattactattactcgctgc 182 |||| | || || | || ||||| ||| || |||||||||||||||||||| || ||| Sbjct: 13721858 ttcggatagtttgcaaaagatggaaccgtctcttatctgggaattactattattccttgc 13721799 Query: 183 ggaagaaatttggcatggcagaagaatgggtttacgtcttcaaaagggatcgtgatcaga 242 | |||| | || ||||| |||||||||||||| ||||| |||||||| ||||| | Sbjct: 13721798 gcaagagaaacgggatggcggaagaatgggtttatgtctttaaaagggaccgtgaaggaa 13721739 Query: 243 aactatcttggcatgcctttgatccagtgcaccagctctggaggtcgcttcctcccgttc 302 | |||| |||||||||||||| ||| |||||||||| |||| ||| ||||| || |||| Sbjct: 13721738 agatatcctggcatgcctttgacccactgcaccagctatggaagtcacttccaccagttc 13721679 Query: 303 caccagagtattcagaagctgtgggctttggttgcgctgttctcagtggctgctatttgt 362 || |||| ||||||||||| | |||||||| || |||||||| ||||| |||||| ||| Sbjct: 13721678 cagcagaatattcagaagcattaggctttggctgtgctgttctgagtggttgctatctgt 13721619 Query: 363 acttatttggaggcaaagacccagtacgagggtctatgaggcatgtcgtgttttacaata 422 |||||||||| || || || || | | || |||||||||| ||| || ||||||||| Sbjct: 13721618 acttatttggcggtaaggatcctctgaggggctctatgaggcgtgttgtattttacaatg 13721559 Query: 423 ctcggacaaacaagtggtaccgggctccagatatgctacggaagcggcacttatttggct 482 ||||||||||||| ||| |||| |||||||||||| ||||||| || ||||| ||||| | Sbjct: 13721558 ctcggacaaacaaatggcaccgagctccagatatgttacggaaacgacacttttttggtt 13721499 Query: 483 cttgtgtcataaacaactgcctctatgttgccggtggggagtgtgaagggataca 537 |||||||||||||||| ||| | |||||||| ||||||||||||||||| ||||| Sbjct: 13721498 cttgtgtcataaacaattgcttgtatgttgctggtggggagtgtgaaggaataca 13721444
>dbj|AK058303.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-G06, full insert sequence Length = 1623 Score = 254 bits (128), Expect = 3e-64 Identities = 329/396 (83%) Strand = Plus / Plus Query: 142 atggagccgacttttatctgggaattactattactcgctgcggaagaaatttggcatggc 201 ||||| ||| || |||||||||||||||||||| || |||| |||| | || ||||| Sbjct: 18 atggaaccgtctcttatctgggaattactattattccttgcgcaagagaaacgggatggc 77 Query: 202 agaagaatgggtttacgtcttcaaaagggatcgtgatcagaaactatcttggcatgcctt 261 |||||||||||||| ||||| |||||||| ||||| || |||| ||||||||||| Sbjct: 78 ggaagaatgggtttatgtctttaaaagggaccgtgaaggaaagatatcctggcatgcctt 137 Query: 262 tgatccagtgcaccagctctggaggtcgcttcctcccgttccaccagagtattcagaagc 321 ||| ||| |||||||||| |||| ||| ||||| || |||||| |||| ||||||||||| Sbjct: 138 tgacccactgcaccagctatggaagtcacttccaccagttccagcagaatattcagaagc 197 Query: 322 tgtgggctttggttgcgctgttctcagtggctgctatttgtacttatttggaggcaaaga 381 | |||||||| || |||||||| ||||| |||||| ||||||||||||| || || || Sbjct: 198 attaggctttggctgtgctgttctgagtggttgctatctgtacttatttggcggtaagga 257 Query: 382 cccagtacgagggtctatgaggcatgtcgtgttttacaatactcggacaaacaagtggta 441 || | | || |||||||||| ||| || ||||||||| ||||||||||||| ||| | Sbjct: 258 tcctctgaggggctctatgaggcgtgttgtattttacaatgctcggacaaacaaatggca 317 Query: 442 ccgggctccagatatgctacggaagcggcacttatttggctcttgtgtcataaacaactg 501 ||| |||||||||||| ||||||| || ||||| ||||| ||||||||||||||||| || Sbjct: 318 ccgagctccagatatgttacggaaacgacacttttttggttcttgtgtcataaacaattg 377 Query: 502 cctctatgttgccggtggggagtgtgaagggataca 537 | | |||||||| ||||||||||||||||| ||||| Sbjct: 378 cttgtatgttgctggtggggagtgtgaaggaataca 413
>gb|AY108949.1| Zea mays PCO137944 mRNA sequence Length = 1182 Score = 107 bits (54), Expect = 4e-20 Identities = 123/146 (84%) Strand = Plus / Plus Query: 395 tctatgaggcatgtcgtgttttacaatactcggacaaacaagtggtaccgggctccagat 454 |||||||||| ||| || || |||||| |||| |||||||| ||| |||||||||| ||| Sbjct: 51 tctatgaggcgtgttgtattctacaatgctcgtacaaacaaatggcaccgggctccggat 110 Query: 455 atgctacggaagcggcacttatttggctcttgtgtcataaacaactgcctctatgttgcc 514 ||| | |||| || ||||| ||||| |||||||| |||||||| || ||||||||||| Sbjct: 111 atgatgaggaaacgtcacttttttggttcttgtgtaataaacaattgtctctatgttgct 170 Query: 515 ggtggggagtgtgaagggatacagag 540 || || ||||||||||| |||||||| Sbjct: 171 ggaggagagtgtgaaggaatacagag 196
>gb|AC150706.4| Medicago truncatula clone mth2-132l18, complete sequence Length = 105472 Score = 75.8 bits (38), Expect = 2e-10 Identities = 77/90 (85%) Strand = Plus / Minus Query: 476 tttggctcttgtgtcataaacaactgcctctatgttgccggtggggagtgtgaagggata 535 ||||| ||||| || || || ||||||||||||||||| |||||||| ||| |||| || Sbjct: 18884 tttggttcttgcgtaatgaataactgcctctatgttgcaggtggggaatgtaaaggaatt 18825 Query: 536 cagagaactctaagatctgctgaggtttac 565 || |||||||| ||||||||||||||||| Sbjct: 18824 caaagaactcttcgatctgctgaggtttac 18795 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Minus Query: 192 ttggcatggcagaagaatgggtttacgtcttcaaaagggatcgtga 237 |||| |||||||||||||||||||| ||| ||||||| || ||||| Sbjct: 19168 ttggaatggcagaagaatgggtttatgtcatcaaaagagaccgtga 19123
>ref|NM_104402.2| Arabidopsis thaliana unknown protein AT1G55270 mRNA, complete cds Length = 2783 Score = 56.0 bits (28), Expect = 1e-04 Identities = 67/80 (83%) Strand = Plus / Plus Query: 452 gatatgctacggaagcggcacttatttggctcttgtgtcataaacaactgcctctatgtt 511 |||||||| |||||||||| || ||||| | |||||| |||||||| || | ||||| Sbjct: 845 gatatgcttaggaagcggcatttttttggttgttgtgttataaacaattgtttatatgta 904 Query: 512 gccggtggggagtgtgaagg 531 || ||||||||||||||||| Sbjct: 905 gcgggtggggagtgtgaagg 924 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Plus Query: 311 tattcagaagctgtgggctttggttgcgctgtt 343 |||||||| ||||| || ||||||||||||||| Sbjct: 704 tattcagaggctgttgggtttggttgcgctgtt 736 Score = 40.1 bits (20), Expect = 8.3 Identities = 32/36 (88%) Strand = Plus / Plus Query: 203 gaagaatgggtttacgtcttcaaaagggatcgtgat 238 |||||||||||||| || || ||||| ||||||||| Sbjct: 596 gaagaatgggtttatgtttttaaaagagatcgtgat 631
>gb|AY051069.1| Arabidopsis thaliana unknown protein (At1g55270) mRNA, complete cds Length = 1336 Score = 56.0 bits (28), Expect = 1e-04 Identities = 67/80 (83%) Strand = Plus / Plus Query: 452 gatatgctacggaagcggcacttatttggctcttgtgtcataaacaactgcctctatgtt 511 |||||||| |||||||||| || ||||| | |||||| |||||||| || | ||||| Sbjct: 634 gatatgcttaggaagcggcatttttttggttgttgtgttataaacaattgtttatatgta 693 Query: 512 gccggtggggagtgtgaagg 531 || ||||||||||||||||| Sbjct: 694 gcgggtggggagtgtgaagg 713 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Plus Query: 311 tattcagaagctgtgggctttggttgcgctgtt 343 |||||||| ||||| || ||||||||||||||| Sbjct: 493 tattcagaggctgttgggtttggttgcgctgtt 525 Score = 40.1 bits (20), Expect = 8.3 Identities = 32/36 (88%) Strand = Plus / Plus Query: 203 gaagaatgggtttacgtcttcaaaagggatcgtgat 238 |||||||||||||| || || ||||| ||||||||| Sbjct: 385 gaagaatgggtttatgtttttaaaagagatcgtgat 420
>gb|AF370138.1| Arabidopsis thaliana unknown protein (At1g55270) mRNA, complete cds Length = 1878 Score = 56.0 bits (28), Expect = 1e-04 Identities = 67/80 (83%) Strand = Plus / Plus Query: 452 gatatgctacggaagcggcacttatttggctcttgtgtcataaacaactgcctctatgtt 511 |||||||| |||||||||| || ||||| | |||||| |||||||| || | ||||| Sbjct: 845 gatatgcttaggaagcggcatttttttggttgttgtgttataaacaattgtttatatgta 904 Query: 512 gccggtggggagtgtgaagg 531 || ||||||||||||||||| Sbjct: 905 gcgggtggggagtgtgaagg 924 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Plus Query: 311 tattcagaagctgtgggctttggttgcgctgtt 343 |||||||| ||||| || ||||||||||||||| Sbjct: 704 tattcagaggctgttgggtttggttgcgctgtt 736 Score = 40.1 bits (20), Expect = 8.3 Identities = 32/36 (88%) Strand = Plus / Plus Query: 203 gaagaatgggtttacgtcttcaaaagggatcgtgat 238 |||||||||||||| || || ||||| ||||||||| Sbjct: 596 gaagaatgggtttatgtttttaaaagagatcgtgat 631
>gb|AC027034.10|AC027034 Arabidopsis thaliana chromosome 1 BAC F7A10 genomic sequence, complete sequence Length = 101954 Score = 56.0 bits (28), Expect = 1e-04 Identities = 67/80 (83%) Strand = Plus / Plus Query: 452 gatatgctacggaagcggcacttatttggctcttgtgtcataaacaactgcctctatgtt 511 |||||||| |||||||||| || ||||| | |||||| |||||||| || | ||||| Sbjct: 59417 gatatgcttaggaagcggcatttttttggttgttgtgttataaacaattgtttatatgta 59476 Query: 512 gccggtggggagtgtgaagg 531 || ||||||||||||||||| Sbjct: 59477 gcgggtggggagtgtgaagg 59496 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Plus Query: 311 tattcagaagctgtgggctttggttgcgctgtt 343 |||||||| ||||| || ||||||||||||||| Sbjct: 59276 tattcagaggctgttgggtttggttgcgctgtt 59308 Score = 40.1 bits (20), Expect = 8.3 Identities = 32/36 (88%) Strand = Plus / Plus Query: 203 gaagaatgggtttacgtcttcaaaagggatcgtgat 238 |||||||||||||| || || ||||| ||||||||| Sbjct: 59168 gaagaatgggtttatgtttttaaaagagatcgtgat 59203
>gb|AC020713.7| Homo sapiens BAC clone RP11-439B18 from 4, complete sequence Length = 187350 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Minus Query: 238 tcagaaactatcttggcatgcctttgatc 266 ||||||| ||||||||||||||||||||| Sbjct: 4077 tcagaaaatatcttggcatgcctttgatc 4049
>gb|AC141470.4| Mus musculus BAC clone RP24-566E24 from chromosome Y, complete sequence Length = 197634 Score = 46.1 bits (23), Expect = 0.14 Identities = 30/31 (96%), Gaps = 1/31 (3%) Strand = Plus / Plus Query: 185 aagaaatttggcatggcagaagaatgggttt 215 ||||||||||||||||||| ||||||||||| Sbjct: 90751 aagaaatttggcatggcag-agaatgggttt 90780
>emb|AL670379.17| Human DNA sequence from clone RP6-166C19 on chromosome X Contains the gene for a novel protein similar to Proliferation-associated protein 2G4 (Cell cycle protein p38-2G4 homolog) (hG4-1) (LOC347458), ten copies of the gene for a novel protein similar to LOC347458, the 5' end of the gene for a novel protein similar to LOC347458 and twelve CpG islands, complete sequence Length = 75160 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Plus Query: 239 cagaaactatcttggcatgcctttga 264 |||||| ||||||||||||||||||| Sbjct: 74700 cagaaaatatcttggcatgcctttga 74725
>emb|AL031846.2|HS742C19 Human DNA sequence from clone RP4-742C19 on chromosome 22q12.3-13.1, complete sequence Length = 122748 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Minus Query: 239 cagaaactatcttggcatgcctttga 264 |||||| ||||||||||||||||||| Sbjct: 3878 cagaaaatatcttggcatgcctttga 3853
>gb|AC037459.16| Homo sapiens chromosome 8, clone RP11-582J16, complete sequence Length = 174888 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Plus Query: 239 cagaaactatcttggcatgcctttga 264 |||||| ||||||||||||||||||| Sbjct: 5921 cagaaaatatcttggcatgcctttga 5946
>gb|AC006144.1|AC006144 Homo sapiens PAC clone RP1-296G17 from Xq23, complete sequence Length = 81184 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Plus Query: 239 cagaaactatcttggcatgcctttga 264 |||||| ||||||||||||||||||| Sbjct: 1540 cagaaaatatcttggcatgcctttga 1565
>gb|AC087854.11| Homo sapiens chromosome 8, clone RP11-382J24, complete sequence Length = 157419 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Minus Query: 239 cagaaactatcttggcatgcctttga 264 |||||| ||||||||||||||||||| Sbjct: 39823 cagaaaatatcttggcatgcctttga 39798
>emb|AL627142.9| Human DNA sequence from clone RP11-632N11 on chromosome X, complete sequence Length = 5573 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Plus Query: 239 cagaaactatcttggcatgcctttga 264 |||||| ||||||||||||||||||| Sbjct: 5107 cagaaaatatcttggcatgcctttga 5132
>ref|NM_191764.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1344 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 317 gaagctgtgggctttggttgc 337 ||||||||||||||||||||| Sbjct: 1135 gaagctgtgggctttggttgc 1155
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 317 gaagctgtgggctttggttgc 337 ||||||||||||||||||||| Sbjct: 29836369 gaagctgtgggctttggttgc 29836349
>gb|AC064859.6| Homo sapiens BAC clone RP11-329A6 from 2, complete sequence Length = 112105 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 186 agaaatttggcatggcagaag 206 ||||||||||||||||||||| Sbjct: 77667 agaaatttggcatggcagaag 77687
>dbj|AP003288.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0683B11 Length = 155955 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 317 gaagctgtgggctttggttgc 337 ||||||||||||||||||||| Sbjct: 80464 gaagctgtgggctttggttgc 80444
>dbj|AK098914.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002I15, full insert sequence Length = 1708 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 317 gaagctgtgggctttggttgc 337 ||||||||||||||||||||| Sbjct: 1534 gaagctgtgggctttggttgc 1554
>dbj|AK071968.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013081L11, full insert sequence Length = 1734 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 317 gaagctgtgggctttggttgc 337 ||||||||||||||||||||| Sbjct: 1536 gaagctgtgggctttggttgc 1556
>dbj|AK062152.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-045-H06, full insert sequence Length = 610 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 317 gaagctgtgggctttggttgc 337 ||||||||||||||||||||| Sbjct: 412 gaagctgtgggctttggttgc 432
>emb|CT573071.1| Kuenenia stuttgartiensis genome fragment KUST_E (5 of 5) Length = 2199546 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 162 ggaattactattactcgctgc 182 ||||||||||||||||||||| Sbjct: 531854 ggaattactattactcgctgc 531874
>gb|AC121298.10| Mus musculus chromosome 5, clone RP23-377E6, complete sequence Length = 194045 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 55 gcctggccttcctgatgacc 74 |||||||||||||||||||| Sbjct: 95336 gcctggccttcctgatgacc 95317
>ref|XM_493838.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3060 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 248 tcttggcatgcctttgatcc 267 |||||||||||||||||||| Sbjct: 295 tcttggcatgcctttgatcc 276
>gb|AC132448.3| Mus musculus BAC clone RP23-180B23 from chromosome 8, complete sequence Length = 211388 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 314 tcagaagctgtgggctttgg 333 |||||||||||||||||||| Sbjct: 62099 tcagaagctgtgggctttgg 62118
>gb|AC125080.3| Mus musculus BAC clone RP24-68P23 from chromosome 16, complete sequence Length = 181087 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 204 aagaatgggtttacgtcttcaaaa 227 |||||||||||| ||||||||||| Sbjct: 14053 aagaatgggttttcgtcttcaaaa 14030
>emb|CR636080.2|CNS0EPRQ Tetraodon nigroviridis full-length cDNA Length = 1007 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 24 aggagaggtgccgaactcag 43 |||||||||||||||||||| Sbjct: 888 aggagaggtgccgaactcag 907
>emb|AL450063.14| Human DNA sequence from clone RP11-82H13 on chromosome 1 Contains the 3' end of the PRKACB gene for cAMP-dependent catalytic protein kinase beta and a neural precursor cell expressed developmentally down-regulated 8 (NEDD8) pseudogene, complete sequence Length = 130878 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 238 tcagaaactatcttggcatgcctt 261 ||||||| |||||||||||||||| Sbjct: 63784 tcagaaaatatcttggcatgcctt 63807
>emb|AL035531.17|HS483L3 Human DNA sequence from clone RP3-483L3 on chromosome 6p25.1-25.3, complete sequence Length = 74513 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 281 tggaggtcgcttcctcccgttcca 304 ||||||||||| |||||||||||| Sbjct: 11806 tggaggtcgctacctcccgttcca 11829
>gb|AC084405.6| Oryza sativa chromosome 3 BAC OSJNBa0044H10 genomic sequence, complete sequence Length = 165113 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 248 tcttggcatgcctttgatcc 267 |||||||||||||||||||| Sbjct: 77362 tcttggcatgcctttgatcc 77381
>emb|Z69944.1|SPAC1F12 S.pombe chromosome I cosmid c1F12 Length = 14399 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 129 tggtctgtagaaaatggagc 148 |||||||||||||||||||| Sbjct: 3554 tggtctgtagaaaatggagc 3535
>gb|AC158562.8| Mus musculus chromosome 8, clone RP24-275J2, complete sequence Length = 181144 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 303 caccagagtattcagaagct 322 |||||||||||||||||||| Sbjct: 81665 caccagagtattcagaagct 81684
>gb|AC055782.9| Homo sapiens chromosome 15, clone RP11-528P19, complete sequence Length = 172697 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 gcttctgcctggccttcctg 68 |||||||||||||||||||| Sbjct: 161551 gcttctgcctggccttcctg 161532
>gb|AC024375.13| Homo sapiens chromosome 15, clone RP11-572A8, complete sequence Length = 163775 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 gcttctgcctggccttcctg 68 |||||||||||||||||||| Sbjct: 36319 gcttctgcctggccttcctg 36300
>gb|AC135319.28| Medicago truncatula clone mth2-6g4, complete sequence Length = 120194 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 467 cggcacttatttggctcttg 486 |||||||||||||||||||| Sbjct: 60033 cggcacttatttggctcttg 60052
>gb|AC182736.3| Pan troglodytes BAC clone CH251-15A9 from chromosome 7, complete sequence Length = 181648 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 238 tcagaaactatcttggcatgcctt 261 ||||||| |||||||||||||||| Sbjct: 135539 tcagaaaatatcttggcatgcctt 135516
>gb|AC005743.5| Mus musculus strain 129S6/SvEvTac chromosome 8c1 clone rp21-657p21, complete sequence Length = 185548 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 303 caccagagtattcagaagct 322 |||||||||||||||||||| Sbjct: 12335 caccagagtattcagaagct 12354
>gb|AC006943.25| Mus musculus strain 129S6/SvEvTac chromosome 8c1 clone rp21-602f10, complete sequence Length = 84034 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 303 caccagagtattcagaagct 322 |||||||||||||||||||| Sbjct: 6192 caccagagtattcagaagct 6173
>gb|AF319992.1|AF319992 Oryzias latipes strain Carbio DMRT2 gene, partial cds Length = 2197 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 40 tcaggcgccgcttctgcctg 59 |||||||||||||||||||| Sbjct: 23 tcaggcgccgcttctgcctg 4
>ref|NM_001019751.1| Schizosaccharomyces pombe 972h- hypothetical protein (SPAC1F12.04c), partial mRNA Length = 576 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 129 tggtctgtagaaaatggagc 148 |||||||||||||||||||| Sbjct: 460 tggtctgtagaaaatggagc 479
>gb|AC023892.35|AC023892 Homo sapiens 12 BAC RP11-937H2 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 186000 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 587 tcttgcatcagtgaaatgaa 606 |||||||||||||||||||| Sbjct: 88344 tcttgcatcagtgaaatgaa 88363
>gb|AC023160.31|AC023160 Homo sapiens 12 BAC RP11-1035D8 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 101027 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 587 tcttgcatcagtgaaatgaa 606 |||||||||||||||||||| Sbjct: 2113 tcttgcatcagtgaaatgaa 2094
>gb|AC135628.8| Homo sapiens chromosome 15, clone RP11-883G10, complete sequence Length = 137088 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 gcttctgcctggccttcctg 68 |||||||||||||||||||| Sbjct: 49858 gcttctgcctggccttcctg 49839
>dbj|AP003733.5| Homo sapiens genomic DNA, chromosome 11 clone:RP11-810P12, complete sequence Length = 166867 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 390 gagggtctatgaggcatgtc 409 |||||||||||||||||||| Sbjct: 65482 gagggtctatgaggcatgtc 65501
>gb|AC108826.9| Mus musculus chromosome 16, clone RP23-109P11, complete sequence Length = 191894 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 204 aagaatgggtttacgtcttcaaaa 227 |||||||||||| ||||||||||| Sbjct: 147131 aagaatgggttttcgtcttcaaaa 147108
>gb|AC157495.2| Gallus gallus BAC clone CH261-13P20 from chromosome unknown, complete sequence Length = 228855 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 199 ggcagaagaatgggtttacg 218 |||||||||||||||||||| Sbjct: 914 ggcagaagaatgggtttacg 933 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,732,491 Number of Sequences: 3902068 Number of extensions: 4732491 Number of successful extensions: 93027 Number of sequences better than 10.0: 58 Number of HSP's better than 10.0 without gapping: 60 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 92755 Number of HSP's gapped (non-prelim): 261 length of query: 613 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 590 effective length of database: 17,143,297,704 effective search space: 10114545645360 effective search space used: 10114545645360 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
