ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal23a13
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 84 1e-13
2dbj|AP004401.5| Oryza sativa (japonica cultivar-group) genomic D... 84 1e-13
3ref|NM_185739.1| Oryza sativa (japonica cultivar-group), mRNA 74 1e-10
4gb|AY111161.1| Zea mays CL1533_1 mRNA sequence 66 3e-08
5gb|AF073522.1|AF073522 Zea mays CRP1 (crp1) mRNA, nuclear gene e... 66 3e-08
6gb|AC132604.4| Mus musculus BAC clone RP24-80P7 from chromosome ... 42 0.39
7ref|NM_123596.2| Arabidopsis thaliana unknown protein AT5G42310 ... 40 1.5
8gb|AC146680.3| Gasterosteus aculeatus clone CH213-10I3, complete... 40 1.5
9gb|AC122687.2| Homo sapiens 12 BAC RP13-501J24 (Roswell Park Can... 40 1.5
10gb|AY120753.1| Arabidopsis thaliana maize crp1 protein-like (At5... 40 1.5
11emb|BX296532.7| Zebrafish DNA sequence from clone CH211-281C19 i... 40 1.5
12emb|BX784022.6| Zebrafish DNA sequence from clone CH211-152C8 in... 40 1.5
13emb|BX832769.1|CNS0A1MH Arabidopsis thaliana Full-length cDNA Co... 40 1.5
14gb|AC005703.2|AC005703 Homo sapiens chromosome 17, clone hRPK.84... 40 1.5
15dbj|AB023032.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 40 1.5
16gb|AC168214.7| Mus musculus chromosome 15, clone RP24-373K19, co... 38 6.1
17gb|CP000141.1| Carboxydothermus hydrogenoformans Z-2901, complet... 38 6.1
18gb|AC149783.2| Bos taurus BAC CH240-3K17 (Children's Hospital O... 38 6.1
19emb|CR936923.5| Human DNA sequence from clone DAMC-324C19 on chr... 38 6.1
20gb|AC117223.3| Mus musculus BAC clone RP23-348B1 from chromosome... 38 6.1
21gb|AC163029.5| Mus musculus chromosome 1, clone RP23-267I23, com... 38 6.1
22emb|BX248413.5| Human DNA sequence from clone DASS-263D3 on chro... 38 6.1
23emb|AL929561.5| Human DNA sequence from clone DAQB-117O11 on chr... 38 6.1
24emb|AL662865.4| Human DNA sequence from clone XXbac-216M5 on chr... 38 6.1
25emb|AL662791.3| Human DNA sequence from clone XXbac-258E24 on ch... 38 6.1
26gb|AC120541.8| Mus musculus, clone RP23-286L18, complete sequence 38 6.1
27emb|AL031073.1|HS142F18 Human DNA sequence from clone RP1-142F18... 38 6.1
28emb|CR759835.5| Human DNA sequence from clone DADB-29N8 on chrom... 38 6.1
29emb|CR759957.2| Human DNA sequence from clone DAAP-223O5 on chro... 38 6.1
30dbj|AK142870.1| Mus musculus 15 days embryo head cDNA, RIKEN ful... 38 6.1
31emb|BX927167.6| Human DNA sequence from clone DAMA-52D19 on chro... 38 6.1
32emb|AL772181.23| Mouse DNA sequence from clone RP23-118H3 on chr... 38 6.1
33gb|AC074020.4| Homo sapiens BAC clone RP11-341A4 from 2, complet... 38 6.1
34gb|AF165214.1|AF165214 Bacteriophage D3, complete genome 38 6.1
35dbj|BA000016.3| Clostridium perfringens str. 13 DNA, complete ge... 38 6.1
36emb|AL953880.11| Zebrafish DNA sequence from clone CH211-236O11 ... 38 6.1
37gb|AC006021.2|AC006021 Homo sapiens PAC clone RP5-1129L24 from 7... 38 6.1
38emb|CT486003.10| Mouse DNA sequence from clone RP23-415F11 on ch... 38 6.1
39gb|AC161018.4| Pan troglodytes BAC clone CH251-345F11 from chrom... 38 6.1
40emb|AL035402.7|HS88J8 Human DNA sequence from clone RP1-88J8 on ... 38 6.1
41gb|AC123689.8| Mus musculus chromosome 15, clone RP23-321P10, co... 38 6.1
42gb|AC102363.19| Mus musculus chromosome 1, clone RP23-76B18, com... 38 6.1
43gb|AC164643.4| Mus musculus BAC clone RP23-254F23 from chromosom... 38 6.1
44gb|AC168312.8| Mus musculus chromosome 15, clone RP24-288F21, co... 38 6.1
45gb|AC112493.2| Homo sapiens X BAC RP11-2M5 (Roswell Park Cancer ... 38 6.1 
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 83.8 bits (42), Expect = 1e-13
 Identities = 60/66 (90%)
 Strand = Plus / Plus

                                                                            
Query: 6        tttggtgaggatagaagggttgttgaagcattctccgtgcttcaattcatgaaggaaaat 65
                |||||||||||||||||| ||| |||||| ||||| ||| | ||||||||||||||||||
Sbjct: 21702375 tttggtgaggatagaaggattgctgaagccttctctgtgttgcaattcatgaaggaaaat 21702434

                      
Query: 66       gtaagt 71
                ||||||
Sbjct: 21702435 gtaagt 21702440
to top
>dbj|AP004401.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0534A03
          Length = 153170

 Score = 83.8 bits (42), Expect = 1e-13
 Identities = 60/66 (90%)
 Strand = Plus / Plus

                                                                         
Query: 6     tttggtgaggatagaagggttgttgaagcattctccgtgcttcaattcatgaaggaaaat 65
             |||||||||||||||||| ||| |||||| ||||| ||| | ||||||||||||||||||
Sbjct: 19558 tttggtgaggatagaaggattgctgaagccttctctgtgttgcaattcatgaaggaaaat 19617

                   
Query: 66    gtaagt 71
             ||||||
Sbjct: 19618 gtaagt 19623
to top
>ref|NM_185739.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1986

 Score = 73.8 bits (37), Expect = 1e-10
 Identities = 55/61 (90%)
 Strand = Plus / Plus

                                                                        
Query: 6    tttggtgaggatagaagggttgttgaagcattctccgtgcttcaattcatgaaggaaaat 65
            |||||||||||||||||| ||| |||||| ||||| ||| | ||||||||||||||||||
Sbjct: 1744 tttggtgaggatagaaggattgctgaagccttctctgtgttgcaattcatgaaggaaaat 1803

             
Query: 66   g 66
            |
Sbjct: 1804 g 1804
to top
>gb|AY111161.1| Zea mays CL1533_1 mRNA sequence
          Length = 2731

 Score = 65.9 bits (33), Expect = 3e-08
 Identities = 54/61 (88%)
 Strand = Plus / Plus

                                                                        
Query: 6    tttggtgaggatagaagggttgttgaagcattctccgtgcttcaattcatgaaggaaaat 65
            |||||||| |||||||||||||||||||| ||||| ||||| || ||||||| ||| |||
Sbjct: 1883 tttggtgaagatagaagggttgttgaagccttctctgtgctgcagttcatgagggagaat 1942

             
Query: 66   g 66
            |
Sbjct: 1943 g 1943
to top
>gb|AF073522.1|AF073522 Zea mays CRP1 (crp1) mRNA, nuclear gene encoding chloroplast protein,
            crp1-hcf111 allele, complete cds
          Length = 2716

 Score = 65.9 bits (33), Expect = 3e-08
 Identities = 54/61 (88%)
 Strand = Plus / Plus

                                                                        
Query: 6    tttggtgaggatagaagggttgttgaagcattctccgtgcttcaattcatgaaggaaaat 65
            |||||||| |||||||||||||||||||| ||||| ||||| || ||||||| ||| |||
Sbjct: 1883 tttggtgaagatagaagggttgttgaagccttctctgtgctgcagttcatgagggagaat 1942

             
Query: 66   g 66
            |
Sbjct: 1943 g 1943
to top
>gb|AC132604.4| Mus musculus BAC clone RP24-80P7 from chromosome 13, complete sequence
          Length = 164377

 Score = 42.1 bits (21), Expect = 0.39
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 17    tagaagggttgttgaagcatt 37
             |||||||||||||||||||||
Sbjct: 83704 tagaagggttgttgaagcatt 83724
to top
>ref|NM_123596.2| Arabidopsis thaliana unknown protein AT5G42310 mRNA, complete cds
          Length = 2897

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 3    gcctttggtgaggatagaag 22
            ||||||||||||||||||||
Sbjct: 1959 gcctttggtgaggatagaag 1978
to top
>gb|AC146680.3| Gasterosteus aculeatus clone CH213-10I3, complete sequence
          Length = 214256

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 61    aaaatgtaagtgatgttaat 80
             ||||||||||||||||||||
Sbjct: 83239 aaaatgtaagtgatgttaat 83220
to top
>gb|AC122687.2| Homo sapiens 12 BAC RP13-501J24 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 141411

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 43    tgcttcaattcatgaaggaaaatg 66
             |||||||||||||| |||||||||
Sbjct: 95103 tgcttcaattcatggaggaaaatg 95080
to top
>gb|AY120753.1| Arabidopsis thaliana maize crp1 protein-like (At5g42310) mRNA,
            complete cds
          Length = 2537

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 3    gcctttggtgaggatagaag 22
            ||||||||||||||||||||
Sbjct: 1958 gcctttggtgaggatagaag 1977
to top
>emb|BX296532.7| Zebrafish DNA sequence from clone CH211-281C19 in linkage group 24,
             complete sequence
          Length = 155029

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 58    aggaaaatgtaagtgatgtt 77
             ||||||||||||||||||||
Sbjct: 49861 aggaaaatgtaagtgatgtt 49880
to top
>emb|BX784022.6| Zebrafish DNA sequence from clone CH211-152C8 in linkage group 18,
             complete sequence
          Length = 153244

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 58    aggaaaatgtaagtgatgtt 77
             ||||||||||||||||||||
Sbjct: 49958 aggaaaatgtaagtgatgtt 49977
to top
>emb|BX832769.1|CNS0A1MH Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTPGH9ZF11 of Hormone Treated Callus of strain col-0 of
            Arabidopsis thaliana (thale cress)
          Length = 2382

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 3    gcctttggtgaggatagaag 22
            ||||||||||||||||||||
Sbjct: 1899 gcctttggtgaggatagaag 1918
to top
>gb|AC005703.2|AC005703 Homo sapiens chromosome 17, clone hRPK.849_N_15, complete sequence
          Length = 233454

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 60     gaaaatgtaagtgatgttaa 79
              ||||||||||||||||||||
Sbjct: 100379 gaaaatgtaagtgatgttaa 100360
to top
>dbj|AB023032.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K5J14
          Length = 59762

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 3     gcctttggtgaggatagaag 22
             ||||||||||||||||||||
Sbjct: 56371 gcctttggtgaggatagaag 56390
to top
>gb|AC168214.7| Mus musculus chromosome 15, clone RP24-373K19, complete sequence
          Length = 166835

 Score = 38.2 bits (19), Expect = 6.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 20    aagggttgttgaagcattc 38
             |||||||||||||||||||
Sbjct: 93317 aagggttgttgaagcattc 93335
to top
>gb|CP000141.1| Carboxydothermus hydrogenoformans Z-2901, complete genome
          Length = 2401520

 Score = 38.2 bits (19), Expect = 6.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 98     ttgacctgcatcatgttac 116
              |||||||||||||||||||
Sbjct: 471401 ttgacctgcatcatgttac 471419
to top
>gb|AC149783.2| Bos taurus  BAC CH240-3K17 (Children's Hospital Oakland Research
              Institute Bovine BAC Library (male)) complete sequence
          Length = 205084

 Score = 38.2 bits (19), Expect = 6.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 56     gaaggaaaatgtaagtgat 74
              |||||||||||||||||||
Sbjct: 203435 gaaggaaaatgtaagtgat 203453
to top
>emb|CR936923.5| Human DNA sequence from clone DAMC-324C19 on chromosome 6, complete
             sequence
          Length = 51231

 Score = 38.2 bits (19), Expect = 6.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 93    ttaccttgacctgcatcat 111
             |||||||||||||||||||
Sbjct: 31028 ttaccttgacctgcatcat 31010
to top
>gb|AC117223.3| Mus musculus BAC clone RP23-348B1 from chromosome 2, complete sequence
          Length = 183972

 Score = 38.2 bits (19), Expect = 6.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 83    gctcattttgttaccttga 101
             |||||||||||||||||||
Sbjct: 78894 gctcattttgttaccttga 78876
to top
>gb|AC163029.5| Mus musculus chromosome 1, clone RP23-267I23, complete sequence
          Length = 181761

 Score = 38.2 bits (19), Expect = 6.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 48     caattcatgaaggaaaatg 66
              |||||||||||||||||||
Sbjct: 175760 caattcatgaaggaaaatg 175778
to top
>emb|BX248413.5| Human DNA sequence from clone DASS-263D3 on chromosome 6, complete
             sequence
          Length = 75842

 Score = 38.2 bits (19), Expect = 6.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 93    ttaccttgacctgcatcat 111
             |||||||||||||||||||
Sbjct: 31031 ttaccttgacctgcatcat 31013
to top
>emb|AL929561.5| Human DNA sequence from clone DAQB-117O11 on chromosome 6 Contains the
             KRT18P1 pseudogene 1 for keratin 18, the HCG15 gene for
             the novel transcript HLA complex group 15, the HCG16 gene
             for the novel transcript HLA complex group 16, the ZNF311
             gene for zinc finger protein 311, the OR2AD1P pseudogene
             for the olfactory receptor, family 2, subfamily AD, member
             1, the OR2W1 gene for olfactory receptor, family 2,
             subfamily W, member 1, the OR2P1P pseudogene for olfactory
             receptor, family 2, subfamily P, member 1, the SARAP
             pseudogene for SAR1a gene homolog (S. cerevisiae), the
             OR2B3 gene for olfactory receptor, family 2, subfamily B,
             member 3, the OR2J1P pseudogene for olfactory receptor,
             family 2, subfamily J, member 1, the OR2J3 gene for
             olfactory receptor, family 2, subfamily J, member 3, the
             OR2N1P pseudogene for olfactory receptor, family 2,
             subfamily N, member 1 and 2 CpG islands, complete sequence
          Length = 181111

 Score = 38.2 bits (19), Expect = 6.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 93    ttaccttgacctgcatcat 111
             |||||||||||||||||||
Sbjct: 79349 ttaccttgacctgcatcat 79331
to top
>emb|AL662865.4| Human DNA sequence from clone XXbac-216M5 on chromosome 6 contains a
              keratin 18 (KRT18) pseudogene (KRT18P1), a novel zinc
              finger protein, two putative novel transcripts, the OR2AD1P
              gene for aolfactory receptor, family 2, subfamily AD,
              member 1 (pseudogene), the OR2W1 gene for olfactory
              receptor, family 2, subfamily W, member 1 and two CpG
              islands, complete sequence
          Length = 133757

 Score = 38.2 bits (19), Expect = 6.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 93     ttaccttgacctgcatcat 111
              |||||||||||||||||||
Sbjct: 113049 ttaccttgacctgcatcat 113031
to top
>emb|AL662791.3| Human DNA sequence from clone XXbac-258E24 on chromosome 6 contains a
             keratin 18 (KRT18) pseudogene, a novel zinc finger protein
             fragment, the OR2W1 and OR2B3 genes for olfactory
             receptor, family 2, subfamily W, member 1 and subfamily B,
             member 3, the ORA2D1P and OR2B3 pseudogenes for olfactory
             receptor, family 2, subfamily AD, member 1 and subfamily
             P, member 1, a GTP-binding protein pseudogene, two
             putative novel transcripts and two CpG islands, complete
             sequence
          Length = 134463

 Score = 38.2 bits (19), Expect = 6.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 93    ttaccttgacctgcatcat 111
             |||||||||||||||||||
Sbjct: 77165 ttaccttgacctgcatcat 77147
to top
>gb|AC120541.8| Mus musculus, clone RP23-286L18, complete sequence
          Length = 171942

 Score = 38.2 bits (19), Expect = 6.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 62     aaatgtaagtgatgttaat 80
              |||||||||||||||||||
Sbjct: 125106 aaatgtaagtgatgttaat 125088
to top
>emb|AL031073.1|HS142F18 Human DNA sequence from clone RP1-142F18 on chromosome Xq26.3-27.2
             Contains the MAGEE1 gene for melanoma antigen, family E 1,
             a  melanoma antigen, family E 1(MAGEE1) pseudogene, and a
             CpG island, complete sequence
          Length = 141672

 Score = 38.2 bits (19), Expect = 6.1
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 44    gcttcaattcatgaaggaaaatg 66
             ||||||||||| |||||||||||
Sbjct: 61197 gcttcaattcaagaaggaaaatg 61175
to top
>emb|CR759835.5| Human DNA sequence from clone DADB-29N8 on chromosome 6, complete
             sequence
          Length = 75398

 Score = 38.2 bits (19), Expect = 6.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 93    ttaccttgacctgcatcat 111
             |||||||||||||||||||
Sbjct: 67661 ttaccttgacctgcatcat 67643
to top
>emb|CR759957.2| Human DNA sequence from clone DAAP-223O5 on chromosome 6, complete
             sequence
          Length = 75014

 Score = 38.2 bits (19), Expect = 6.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 93    ttaccttgacctgcatcat 111
             |||||||||||||||||||
Sbjct: 61592 ttaccttgacctgcatcat 61574
to top
>dbj|AK142870.1| Mus musculus 15 days embryo head cDNA, RIKEN full-length enriched
            library, clone:D930033I06 product:unclassifiable, full
            insert sequence
          Length = 4551

 Score = 38.2 bits (19), Expect = 6.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 62   aaatgtaagtgatgttaat 80
            |||||||||||||||||||
Sbjct: 3440 aaatgtaagtgatgttaat 3458
to top
>emb|BX927167.6| Human DNA sequence from clone DAMA-52D19 on chromosome 6, complete
              sequence
          Length = 124344

 Score = 38.2 bits (19), Expect = 6.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 93     ttaccttgacctgcatcat 111
              |||||||||||||||||||
Sbjct: 104770 ttaccttgacctgcatcat 104752
to top
>emb|AL772181.23| Mouse DNA sequence from clone RP23-118H3 on chromosome 2, complete
             sequence
          Length = 219704

 Score = 38.2 bits (19), Expect = 6.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 83    gctcattttgttaccttga 101
             |||||||||||||||||||
Sbjct: 78890 gctcattttgttaccttga 78872
to top
>gb|AC074020.4| Homo sapiens BAC clone RP11-341A4 from 2, complete sequence
          Length = 147512

 Score = 38.2 bits (19), Expect = 6.1
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 44    gcttcaattcatgaaggaaaatg 66
             ||||||||||| |||||||||||
Sbjct: 70251 gcttcaattcaagaaggaaaatg 70229
to top
>gb|AF165214.1|AF165214 Bacteriophage D3, complete genome
          Length = 56425

 Score = 38.2 bits (19), Expect = 6.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 23    ggttgttgaagcattctcc 41
             |||||||||||||||||||
Sbjct: 50105 ggttgttgaagcattctcc 50123
to top
>dbj|BA000016.3| Clostridium perfringens str. 13 DNA, complete genome
          Length = 3031430

 Score = 38.2 bits (19), Expect = 6.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 62      aaatgtaagtgatgttaat 80
               |||||||||||||||||||
Sbjct: 1706338 aaatgtaagtgatgttaat 1706320
to top
>emb|AL953880.11| Zebrafish DNA sequence from clone CH211-236O11 in linkage group 16,
             complete sequence
          Length = 161603

 Score = 38.2 bits (19), Expect = 6.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 57    aaggaaaatgtaagtgatg 75
             |||||||||||||||||||
Sbjct: 38375 aaggaaaatgtaagtgatg 38393
to top
>gb|AC006021.2|AC006021 Homo sapiens PAC clone RP5-1129L24 from 7q32-q34, complete sequence
          Length = 98240

 Score = 38.2 bits (19), Expect = 6.1
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 48    caattcatgaaggaaaatgtaag 70
             |||||||||||||||||| ||||
Sbjct: 58888 caattcatgaaggaaaatctaag 58910
to top
>emb|CT486003.10| Mouse DNA sequence from clone RP23-415F11 on chromosome 14, complete
            sequence
          Length = 181037

 Score = 38.2 bits (19), Expect = 6.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 62   aaatgtaagtgatgttaat 80
            |||||||||||||||||||
Sbjct: 3990 aaatgtaagtgatgttaat 3972
to top
>gb|AC161018.4| Pan troglodytes BAC clone CH251-345F11 from chromosome unknown,
             complete sequence
          Length = 153379

 Score = 38.2 bits (19), Expect = 6.1
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 82    cgctcattttgttaccttgacct 104
             |||||||||||||| ||||||||
Sbjct: 45387 cgctcattttgttatcttgacct 45365
to top
>emb|AL035402.7|HS88J8 Human DNA sequence from clone RP1-88J8 on chromosome 6p21.31-21.33
             Contains the OR2W1 gene for olfactory receptor 2W1,
             olfactory receptor 2P1 pseudogene OR2P1P and a GTP binding
             protein pseudogene. Contains ESTs, an STS and GSS,
             complete sequence
          Length = 47216

 Score = 38.2 bits (19), Expect = 6.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 93    ttaccttgacctgcatcat 111
             |||||||||||||||||||
Sbjct: 10872 ttaccttgacctgcatcat 10854
to top
>gb|AC123689.8| Mus musculus chromosome 15, clone RP23-321P10, complete sequence
          Length = 218071

 Score = 38.2 bits (19), Expect = 6.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 20    aagggttgttgaagcattc 38
             |||||||||||||||||||
Sbjct: 37362 aagggttgttgaagcattc 37380
to top
>gb|AC102363.19| Mus musculus chromosome 1, clone RP23-76B18, complete sequence
          Length = 210317

 Score = 38.2 bits (19), Expect = 6.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 48    caattcatgaaggaaaatg 66
             |||||||||||||||||||
Sbjct: 25347 caattcatgaaggaaaatg 25365
to top
>gb|AC164643.4| Mus musculus BAC clone RP23-254F23 from chromosome 7, complete sequence
          Length = 232098

 Score = 38.2 bits (19), Expect = 6.1
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 86     cattttgttaccttgacctgcat 108
              |||||||| ||||||||||||||
Sbjct: 121557 cattttgtcaccttgacctgcat 121579
to top
>gb|AC168312.8| Mus musculus chromosome 15, clone RP24-288F21, complete sequence
          Length = 167239

 Score = 38.2 bits (19), Expect = 6.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 20    aagggttgttgaagcattc 38
             |||||||||||||||||||
Sbjct: 30259 aagggttgttgaagcattc 30241
to top
>gb|AC112493.2| Homo sapiens X BAC RP11-2M5 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 164480

 Score = 38.2 bits (19), Expect = 6.1
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 33    gcattctccgtgcttcaattcat 55
             |||||| ||||||||||||||||
Sbjct: 81975 gcattcaccgtgcttcaattcat 81953


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,208,936
Number of Sequences: 3902068
Number of extensions: 1208936
Number of successful extensions: 87955
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 87794
Number of HSP's gapped (non-prelim): 161
length of query: 130
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 109
effective length of database: 17,151,101,840
effective search space: 1869470100560
effective search space used: 1869470100560
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
to top