ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal22l11 |
|---|---|
| Clone Library Name | barley_pub |
>RED_MOUSE (Q9Z1M8) Protein Red (Protein RER) (IK factor) (Cytokine IK)| Length = 557 Score = 124 bits (312), Expect = 1e-28 Identities = 65/150 (43%), Positives = 103/150 (68%), Gaps = 6/150 (4%) Frame = +1 Query: 70 KRFQLRKANTLGGDLEHTHLVKGLDFALLNKVRSEI-DKKPDAEDGKDAKARETKED--- 237 +R ++++ LGGD+EHTHLVKGLDFALL KVR+EI K+ + E+ + +ETK+D Sbjct: 143 RRQLIQESKFLGGDMEHTHLVKGLDFALLQKVRAEIASKEKEEEELMEKPQKETKKDEDP 202 Query: 238 -RAVSFRTAIAKSVYQWTVKQQQSMIKANDMFLPGRMAFIYNMEDG-LNSDIPTTLHRSK 411 + F+T + ++VY+ K + + N++FLPGRMA++ +++D ++DIPTTL RSK Sbjct: 203 ENKIEFKTRLGRNVYRMLFKSKS--YERNELFLPGRMAYVVDLDDEYADTDIPTTLIRSK 260 Query: 412 ADCPVPEEMVTVSVDGSVLDRIAKIMSYLR 501 ADCP E T++ + V+ ++ +I+SYLR Sbjct: 261 ADCPTMEAQTTLTTNDIVISKLTQILSYLR 290
>RED_HUMAN (Q13123) Protein Red (Protein RER) (IK factor) (Cytokine IK)| Length = 557 Score = 122 bits (306), Expect = 7e-28 Identities = 65/150 (43%), Positives = 101/150 (67%), Gaps = 6/150 (4%) Frame = +1 Query: 70 KRFQLRKANTLGGDLEHTHLVKGLDFALLNKVRSEI-DKKPDAEDGKDAKARETKED--- 237 +R ++++ LGGD+EHTHLVKGLDFALL KVR EI K + E+ + +ETK+D Sbjct: 143 RRQLIQESKFLGGDMEHTHLVKGLDFALLQKVRLEIASKDKEEEELMEKPQKETKKDEDP 202 Query: 238 -RAVSFRTAIAKSVYQWTVKQQQSMIKANDMFLPGRMAFIYNMEDG-LNSDIPTTLHRSK 411 + F+T + ++VY+ K + + N++FLPGRMA++ +++D ++DIPTTL RSK Sbjct: 203 ENKIEFKTRLGRNVYRMLFKSK--AYERNELFLPGRMAYVVDLDDEYADTDIPTTLIRSK 260 Query: 412 ADCPVPEEMVTVSVDGSVLDRIAKIMSYLR 501 ADCP E T++ + V+ ++ +I+SYLR Sbjct: 261 ADCPTMEAQTTLTTNDIVISKLTQILSYLR 290
>YK13_CAEEL (P34337) Putative tyrosine-protein phosphatase C15H7.3 (EC| 3.1.3.48) Length = 398 Score = 33.9 bits (76), Expect = 0.31 Identities = 21/95 (22%), Positives = 42/95 (44%), Gaps = 7/95 (7%) Frame = +1 Query: 196 EDGKDAKARETKEDRAVSFRTAIAKSVYQWTVKQQQSMIKANDMFLPGRMAFIYNMEDGL 375 ++ KD K E KE+R + + + W+ ++ + AN F + + D Sbjct: 81 DEKKDDKKEEKKEERKEEKKEEVKEP---WSEEEPAKRMVANGFFTTTNVGGTFKQTDNF 137 Query: 376 NSDIPT------TLHRSKA-DCPVPEEMVTVSVDG 459 + + + +H+ +A DCP+PEE + +G Sbjct: 138 KTPMDSCPSFKNNMHKIRAPDCPIPEEKLVKLTNG 172
>MA205_DROME (P23226) 205 kDa microtubule-associated protein| Length = 1185 Score = 30.4 bits (67), Expect = 3.4 Identities = 28/141 (19%), Positives = 58/141 (41%), Gaps = 5/141 (3%) Frame = +1 Query: 67 PKRFQLRKANTLGGDLEHTHLVKGLDFALLNKVRSEIDKKPDAEDGKDAKARETKEDRAV 246 P + +ANT+ D+ + DFA+ +KV S+ + ED + + KE+ Sbjct: 616 PAHLVIEQANTMMEDVGGMPIPASEDFAICDKVASK--SSNEVEDHRSEQQAFVKEELLH 673 Query: 247 SFRTAIAK-----SVYQWTVKQQQSMIKANDMFLPGRMAFIYNMEDGLNSDIPTTLHRSK 411 +A+ + + V++++ I +D + + D + + T+ K Sbjct: 674 PVGDVVAQVENLGTEKNFVVEEERLPISVSDEIPLSSASKEKLLPDTTDEQLLTSALEEK 733 Query: 412 ADCPVPEEMVTVSVDGSVLDR 474 PEE V+ + DG + + Sbjct: 734 LRSVAPEESVSTAADGQSISQ 754
>SOX_CAEEL (Q18006) Putative sarcosine oxidase (EC 1.5.3.1)| Length = 384 Score = 29.6 bits (65), Expect = 5.9 Identities = 19/57 (33%), Positives = 25/57 (43%), Gaps = 3/57 (5%) Frame = +1 Query: 322 DMFLPGRMAFIYNMEDGLNSDIPTTLHRSKADCPVPEEMV---TVSVDGSVLDRIAK 483 D PG M F Y+ D L D+ RS+ +P + + VDGS RI K Sbjct: 258 DTDYPGSMKFCYHFGDALTQDLAHPAQRSQRCIDLPAKFIQKYMPVVDGSAPTRIDK 314
>L_SENDZ (P06447) Large structural protein (Protein L) (Transcriptase)| (Replicase) [Includes: RNA-directed RNA polymerase (EC 2.7.7.48); mRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.56); mRNA guanylyltransferase (EC 2.7.7.-)] Length = 2228 Score = 29.6 bits (65), Expect = 5.9 Identities = 13/26 (50%), Positives = 16/26 (61%) Frame = -3 Query: 521 TFPDDPSLRYDMILAILSSTEPSTLT 444 TF DDP LRY + ++ PSTLT Sbjct: 1647 TFLDDPVLRYSQLTGLVIKVFPSTLT 1672
>L_SENDO (O55528) Large structural protein (Protein L) (Transcriptase)| (Replicase) [Includes: RNA-directed RNA polymerase (EC 2.7.7.48); mRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.56); mRNA guanylyltransferase (EC 2.7.7.-)] Length = 2228 Score = 29.6 bits (65), Expect = 5.9 Identities = 13/26 (50%), Positives = 16/26 (61%) Frame = -3 Query: 521 TFPDDPSLRYDMILAILSSTEPSTLT 444 TF DDP LRY + ++ PSTLT Sbjct: 1647 TFLDDPVLRYSQLTGLVIKVFPSTLT 1672
>L_SENDF (Q06996) Large structural protein (Protein L) (Transcriptase)| (Replicase) [Includes: RNA-directed RNA polymerase (EC 2.7.7.48); mRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.56); mRNA guanylyltransferase (EC 2.7.7.-)] Length = 2228 Score = 29.6 bits (65), Expect = 5.9 Identities = 13/26 (50%), Positives = 16/26 (61%) Frame = -3 Query: 521 TFPDDPSLRYDMILAILSSTEPSTLT 444 TF DDP LRY + ++ PSTLT Sbjct: 1647 TFLDDPVLRYSQLTGLVIKVFPSTLT 1672
>L_SENDE (P06829) Large structural protein (Protein L) (Transcriptase)| (Replicase) [Includes: RNA-directed RNA polymerase (EC 2.7.7.48); mRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.56); mRNA guanylyltransferase (EC 2.7.7.-)] Length = 2228 Score = 29.6 bits (65), Expect = 5.9 Identities = 13/26 (50%), Positives = 16/26 (61%) Frame = -3 Query: 521 TFPDDPSLRYDMILAILSSTEPSTLT 444 TF DDP LRY + ++ PSTLT Sbjct: 1647 TFLDDPVLRYSQLTGLVIKVFPSTLT 1672
>L_SENDA (Q9DUD8) Large structural protein (Protein L) (Transcriptase)| (Replicase) [Includes: RNA-directed RNA polymerase (EC 2.7.7.48); mRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.56); mRNA guanylyltransferase (EC 2.7.7.-)] Length = 2228 Score = 29.6 bits (65), Expect = 5.9 Identities = 13/26 (50%), Positives = 16/26 (61%) Frame = -3 Query: 521 TFPDDPSLRYDMILAILSSTEPSTLT 444 TF DDP LRY + ++ PSTLT Sbjct: 1647 TFLDDPVLRYSQLTGLVIKVFPSTLT 1672
>ABP1_RAT (P36633) Amiloride-sensitive amine oxidase [copper-containing]| precursor (EC 1.4.3.6) (Diamine oxidase) (DAO) (Amiloride-binding protein) (ABP) (Histaminase) Length = 746 Score = 29.3 bits (64), Expect = 7.7 Identities = 19/55 (34%), Positives = 24/55 (43%), Gaps = 9/55 (16%) Frame = -1 Query: 220 SPWHPSHPLHQASCQFHYVLCLVEQNPTL*PNEYAPDH---------LPRYLLFS 83 +PW PSH L Q PTL +Y+ +H LP+YLLFS Sbjct: 536 NPWSPSHSLVQ---------------PTLEQTQYSQEHQAAFRFGQTLPKYLLFS 575
>TAL2_STRCO (Q9XAC0) Transaldolase 2 (EC 2.2.1.2)| Length = 372 Score = 29.3 bits (64), Expect = 7.7 Identities = 19/50 (38%), Positives = 26/50 (52%) Frame = +1 Query: 82 LRKANTLGGDLEHTHLVKGLDFALLNKVRSEIDKKPDAEDGKDAKARETK 231 L KA G DL H V +++V +EIDK+ DA +AKA+ K Sbjct: 183 LEKAKERGLDLSQIHSVASF---FVSRVDTEIDKRIDALGTDEAKAQRGK 229
>PDCD1_MOUSE (Q02242) Programmed cell death protein 1 precursor (Protein PD-1)| (mPD-1) Length = 288 Score = 29.3 bits (64), Expect = 7.7 Identities = 9/22 (40%), Positives = 14/22 (63%), Gaps = 2/22 (9%) Frame = +2 Query: 89 KQIPWEVIWSI--LIWSKGWIL 148 +Q+PW W++ L W GW+L Sbjct: 4 RQVPWSFTWAVLQLSWQSGWLL 25
>Y849_METTH (O26937) Hypothetical protein MTH849| Length = 403 Score = 28.9 bits (63), Expect = 10.0 Identities = 15/48 (31%), Positives = 24/48 (50%) Frame = +1 Query: 103 GGDLEHTHLVKGLDFALLNKVRSEIDKKPDAEDGKDAKARETKEDRAV 246 GG L L + +D A +N V S +DK+ + KD K R + + + Sbjct: 41 GGSLIQIQLERPVDAATMNTVTSVLDKRLNIFGVKDVKVRASGDQNVI 88
>ABP1_MOUSE (Q8JZQ5) Amiloride-sensitive amine oxidase [copper-containing]| precursor (EC 1.4.3.6) (Diamine oxidase) (DAO) (Amiloride-binding protein) (ABP) (Histaminase) Length = 751 Score = 28.9 bits (63), Expect = 10.0 Identities = 19/55 (34%), Positives = 24/55 (43%), Gaps = 9/55 (16%) Frame = -1 Query: 220 SPWHPSHPLHQASCQFHYVLCLVEQNPTL*PNEYAPDH---------LPRYLLFS 83 +PW PSH L Q PTL +Y+ +H LP+YLLFS Sbjct: 541 NPWSPSHSLVQ---------------PTLEQTQYSHEHQAAFRFGQTLPKYLLFS 580
>SMRC1_HUMAN (Q92922) SWI/SNF-related matrix-associated actin-dependent| regulator of chromatin subfamily C member 1 (SWI/SNF complex 155 kDa subunit) (BRG1-associated factor 155) Length = 1105 Score = 28.9 bits (63), Expect = 10.0 Identities = 13/31 (41%), Positives = 20/31 (64%) Frame = +1 Query: 157 NKVRSEIDKKPDAEDGKDAKARETKEDRAVS 249 NKV +E D+ A+DG++ K E ++D VS Sbjct: 795 NKVENETDEGDKAQDGENEKNSEKEQDSEVS 825
>KLDC2_RAT (Q3KRE6) Kelch domain-containing protein 2| Length = 406 Score = 28.9 bits (63), Expect = 10.0 Identities = 20/87 (22%), Positives = 35/87 (40%), Gaps = 6/87 (6%) Frame = +1 Query: 178 DKKPDAEDGKDAKARETKEDRAVSFRTAIAKSVYQWTVKQQQSMIKANDMFLPGRMAFIY 357 D A +G +A +R+ + + ++ W + + D +LP +IY Sbjct: 12 DMPGPAFEGYEAMELACPAERSGHVAVSDGRHMFVWGGYKSNQVRGLYDFYLPREELWIY 71 Query: 358 NMEDG------LNSDIPTTLHRSKADC 420 NME G D+P ++ S A C Sbjct: 72 NMETGRWKKINTEGDVPPSMSGSCAVC 98 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 77,910,949 Number of Sequences: 219361 Number of extensions: 1573314 Number of successful extensions: 4395 Number of sequences better than 10.0: 17 Number of HSP's better than 10.0 without gapping: 4274 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4389 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4430660157 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
