ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal22j23
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK101871.1| Oryza sativa (japonica cultivar-group) cDNA clon... 452 e-124
2ref|XM_473489.1| Oryza sativa (japonica cultivar-group), predic... 230 3e-57
3dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 224 2e-55
4dbj|AP004858.3| Oryza sativa (japonica cultivar-group) genomic D... 224 2e-55
5dbj|AP004139.3| Oryza sativa (japonica cultivar-group) genomic D... 224 2e-55
6dbj|AK108411.1| Oryza sativa (japonica cultivar-group) cDNA clon... 224 2e-55
7dbj|AK105878.1| Oryza sativa (japonica cultivar-group) cDNA clon... 133 6e-28
8emb|AL606687.3|OSJN00087 Oryza sativa genomic DNA, chromosome 4,... 111 2e-21
9dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 111 2e-21
10ref|NM_127253.1| Arabidopsis thaliana unknown protein AT2G17000 ... 68 3e-08
11gb|AC002354.2|AC002354 Arabidopsis thaliana chromosome II sectio... 68 3e-08
12gb|AC007260.2| Arabidopsis thaliana chromosome I BAC T30F21 geno... 52 0.002
13emb|AJ234472.1|HVU234472 Hordeum vulgare genomic DNA fragment; c... 52 0.002
14ref|NM_106508.2| Arabidopsis thaliana unknown protein AT1G78610 ... 50 0.006
15ref|NM_104225.1| Arabidopsis thaliana unknown protein AT1G53470 ... 50 0.006
16ref|NM_127254.3| Arabidopsis thaliana unknown protein AT2G17010 ... 44 0.40
17gb|AC090469.9| Homo sapiens chromosome 11, clone RP11-734J23, co... 42 1.6
18emb|CR788255.6| Zebrafish DNA sequence from clone DKEY-9C18 in l... 42 1.6
19gb|AC024260.4|AC024260 Arabidopsis thaliana chromosome 1 BAC F22... 42 1.6
20gb|AC090156.10| Homo sapiens chromosome 11, clone RP11-202M19, c... 42 1.6
21gb|AC018748.3|T3F20 Sequence of BAC T3F20 from Arabidopsis thali... 42 1.6
22dbj|AK130395.1| Homo sapiens cDNA FLJ26885 fis, clone PRS09304 42 1.6
23gb|AC008659.5| Homo sapiens chromosome 5 clone CTB-26E19, comple... 42 1.6
24gb|AC182700.2| Populus trichocarpa clone Pop1-73H20, complete se... 40 6.3
25gb|BC058534.1| Mus musculus RIKEN cDNA A830091I15 gene, mRNA (cD... 40 6.3
26ref|NM_172795.2| Mus musculus RIKEN cDNA A830091I15 gene (A83009... 40 6.3
27gb|BC057547.1| Mus musculus RIKEN cDNA A830091I15 gene, mRNA (cD... 40 6.3
28gb|BC052098.1| Mus musculus RIKEN cDNA A830091I15 gene, mRNA (cD... 40 6.3
29gb|AC074327.6| Homo sapiens chromosome 10 clone RP11-556E13, com... 40 6.3
30emb|AL354695.12| Human DNA sequence from clone RP11-265G8 on chr... 40 6.3
31emb|AL121934.18|HSBA209A2 Human DNA sequence from clone RP11-209... 40 6.3
32emb|BX572091.1| Prochlorococcus marinus MED4 complete genome; se... 40 6.3
33gb|AC153837.4| Mus musculus 6 BAC RP23-192D5 (Roswell Park Cance... 40 6.3
34emb|AL591177.14| Mouse DNA sequence from clone RP23-399H5 on chr... 40 6.3
35dbj|AP008230.1| Desulfitobacterium hafniense Y51 genomic DNA, co... 40 6.3
36gb|AC016654.6| Homo sapiens chromosome 5 clone RP1-31E24, comple... 40 6.3
37dbj|AK044113.1| Mus musculus 10 days neonate cortex cDNA, RIKEN ... 40 6.3
38gb|AC150263.4| Aedes aegypti, clone XX-44H3, complete sequence 40 6.3
39dbj|AK172964.1| Mus musculus premature mRNA for mKIAA0524 protein 40 6.3
40gb|AC016549.8| Homo sapiens chromosome 5 clone CTC-250P22, compl... 40 6.3
41emb|AL627327.29| Mouse DNA sequence from clone RP23-62O17 on chr... 40 6.3
42gb|BC080850.1| Mus musculus RIKEN cDNA A830091I15 gene, mRNA (cD... 40 6.3
43emb|BX571970.20| Zebrafish DNA sequence from clone DKEY-276G11 i... 40 6.3
44gb|AC002324.1|AC002324 Mus musculus chromosome 11, clone 475_H_1... 40 6.3 
>dbj|AK101871.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033070F06, full
            insert sequence
          Length = 3349

 Score =  452 bits (228), Expect = e-124
 Identities = 388/442 (87%)
 Strand = Plus / Plus

                                                                        
Query: 16   gattgatgaagggatcaccattgacaagctccacaggctcaatcagaaaaacgtctcggc 75
            |||||| || |||||||||||||||||||| || |  ||||| ||||||||  |||| ||
Sbjct: 1878 gattgaggaggggatcaccattgacaagcttcataaactcaaccagaaaaatatctcagc 1937

                                                                        
Query: 76   atggaacatgaagaggctgatgaagattgttcgttttgggacgctcaccacaatggacga 135
             ||||||||||| ||| |||||| ||||||||| |||||||||||||| |||||||| ||
Sbjct: 1938 ttggaacatgaaaaggttgatgaggattgttcggtttgggacgctcacgacaatggatga 1997

                                                                        
Query: 136  gcagattcagcaggcaacgggagagggggacgagtcagcgacacagattcgcagcgaata 195
            |||||| |||||||||||||| |||||||| |||||||||||||||||||| || |||||
Sbjct: 1998 gcagatacagcaggcaacgggtgagggggatgagtcagcgacacagattcgtagtgaata 2057

                                                                        
Query: 196  tnaggcgcaggtggccgccaagaagatctttcataatgtggctaagcctggatccaagta 255
            | | ||  || | || ||||||||||||||||| |||||||| |||||||| ||||||||
Sbjct: 2058 tgaagccaagattgctgccaagaagatctttcacaatgtggcgaagcctggctccaagta 2117

                                                                        
Query: 256  catatacttggcagacatgatgcgcttcatgaggcaggaggaagccatcaaagctatgca 315
             ||||||||| ||||  || |||| |||||||||||||| |||||||||||| | ||| |
Sbjct: 2118 tatatacttgtcagatttgctgcgtttcatgaggcaggaagaagccatcaaaacaatgga 2177

                                                                        
Query: 316  tctttttgaaggggcacaggagcactgtagggtcagcaggaggtctctgaagaactgggt 375
            |||||| ||||| |||||||||||| | ||||| |||| ||| ||||| |||||||||||
Sbjct: 2178 tcttttcgaaggagcacaggagcacagcagggttagcaagagatctctaaagaactgggt 2237

                                                                        
Query: 376  ggtgaatgcatttanagagcgcaaagctcttgccctaacacttaatgatacaaaaactgc 435
            |||||||||||||| |||||||||||| |||||||||||||||||||||||||| |||||
Sbjct: 2238 ggtgaatgcatttagagagcgcaaagcccttgccctaacacttaatgatacaaagactgc 2297

                                  
Query: 436  agttaacaagctcaaccagatg 457
            ||| ||||||||||||||||||
Sbjct: 2298 agtgaacaagctcaaccagatg 2319
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>ref|XM_473489.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2805

 Score =  230 bits (116), Expect = 3e-57
 Identities = 353/432 (81%), Gaps = 3/432 (0%)
 Strand = Plus / Plus

                                                                        
Query: 26   gggatcaccattgacaagctccacaggctcaatcagaaaaacgtctcggcatggaacatg 85
            |||||||| || ||| |||| |||||||| |  ||||| ||| |||| || |||| ||||
Sbjct: 1678 gggatcacgatcgaccagcttcacaggcttagccagaagaacatctcagcttggagcatg 1737

                                                                        
Query: 86   aagaggctgatgaagattgttcgttttgggacgctcaccacaatggacgagcagattcag 145
            |||||| ||||||||||||||||||  ||| |||| ||||| ||||||||||||||  ||
Sbjct: 1738 aagaggttgatgaagattgttcgttacggggcgctgaccaccatggacgagcagatcaag 1797

                                                                        
Query: 146  caggcaacgggagagggggacgagtcagcgacacagattcgcagcgaatatnaggcgcag 205
            || ||||| |||||||   |||||   || || ||||| | |||||| ||  ||||  ||
Sbjct: 1798 catgcaaccggagagg---acgagctggccacgcagatacacagcgagtacgaggccaag 1854

                                                                        
Query: 206  gtggccgccaagaagatctttcataatgtggctaagcctggatccaagtacatatacttg 265
            || || ||||||| ||| || || ||||| || ||||||   |||||| |||||||||||
Sbjct: 1855 gttgctgccaagaggattttccacaatgtcgccaagcctcactccaagcacatatacttg 1914

                                                                        
Query: 266  gcagacatgatgcgcttcatgaggcaggaggaagccatcaaagctatgcatctttttgaa 325
             | ||  ||||||| ||||||||||||||||||||  | ||||| ||| |||||||||||
Sbjct: 1915 tcggatttgatgcgtttcatgaggcaggaggaagctctgaaagcaatggatctttttgaa 1974

                                                                        
Query: 326  ggggcacaggagcactgtagggtcagcaggaggtctctgaagaactgggtggtgaatgca 385
            || ||||||||||||   |||||||||| |||||| || |||||||||||||| |  || 
Sbjct: 1975 ggcgcacaggagcacaacagggtcagcaagaggtcactcaagaactgggtggtaagcgcg 2034

                                                                        
Query: 386  tttanagagcgcaaagctcttgccctaacacttaatgatacaaaaactgcagttaacaag 445
            || | |||||||||||||||||| ||||| || || || |||||||||||||| ||||||
Sbjct: 2035 ttcagagagcgcaaagctcttgctctaacgctcaacgacacaaaaactgcagtgaacaag 2094

                        
Query: 446  ctcaaccagatg 457
            ||| ||||||||
Sbjct: 2095 ctccaccagatg 2106
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  224 bits (113), Expect = 2e-55
 Identities = 208/240 (86%)
 Strand = Plus / Plus

                                                                            
Query: 16       gattgatgaagggatcaccattgacaagctccacaggctcaatcagaaaaacgtctcggc 75
                |||||| || |||||||||||||||||||| || |  ||||| ||||||||  |||| ||
Sbjct: 27138374 gattgaggaggggatcaccattgacaagcttcataaactcaaccagaaaaatatctcagc 27138433

                                                                            
Query: 76       atggaacatgaagaggctgatgaagattgttcgttttgggacgctcaccacaatggacga 135
                 ||||||||||| ||| |||||| ||||||||| |||||||||||||| |||||||| ||
Sbjct: 27138434 ttggaacatgaaaaggttgatgaggattgttcggtttgggacgctcacgacaatggatga 27138493

                                                                            
Query: 136      gcagattcagcaggcaacgggagagggggacgagtcagcgacacagattcgcagcgaata 195
                |||||| |||||||||||||| |||||||| |||||||||||||||||||| || |||||
Sbjct: 27138494 gcagatacagcaggcaacgggtgagggggatgagtcagcgacacagattcgtagtgaata 27138553

                                                                            
Query: 196      tnaggcgcaggtggccgccaagaagatctttcataatgtggctaagcctggatccaagta 255
                | | ||  || | || ||||||||||||||||| |||||||| |||||||| ||||||||
Sbjct: 27138554 tgaagccaagattgctgccaagaagatctttcacaatgtggcgaagcctggctccaagta 27138613



 Score =  133 bits (67), Expect = 6e-28
 Identities = 78/82 (95%)
 Strand = Plus / Plus

                                                                            
Query: 376      ggtgaatgcatttanagagcgcaaagctcttgccctaacacttaatgatacaaaaactgc 435
                |||||||||||||| |||||||||||| |||||||||||||||||||||||||| |||||
Sbjct: 27139400 ggtgaatgcatttagagagcgcaaagcccttgccctaacacttaatgatacaaagactgc 27139459

                                      
Query: 436      agttaacaagctcaaccagatg 457
                ||| ||||||||||||||||||
Sbjct: 27139460 agtgaacaagctcaaccagatg 27139481



 Score =  107 bits (54), Expect = 3e-20
 Identities = 105/122 (86%)
 Strand = Plus / Plus

                                                                            
Query: 257      atatacttggcagacatgatgcgcttcatgaggcaggaggaagccatcaaagctatgcat 316
                ||||||||| ||||  || |||| |||||||||||||| |||||||||||| | ||| ||
Sbjct: 27138937 atatacttgtcagatttgctgcgtttcatgaggcaggaagaagccatcaaaacaatggat 27138996

                                                                            
Query: 317      ctttttgaaggggcacaggagcactgtagggtcagcaggaggtctctgaagaactgggtg 376
                ||||| ||||| |||||||||||| | ||||| |||| ||| ||||| ||||||||||||
Sbjct: 27138997 cttttcgaaggagcacaggagcacagcagggttagcaagagatctctaaagaactgggtg 27139056

                  
Query: 377      gt 378
                ||
Sbjct: 27139057 gt 27139058
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>dbj|AP004858.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1725_H08
          Length = 155431

 Score =  224 bits (113), Expect = 2e-55
 Identities = 208/240 (86%)
 Strand = Plus / Plus

                                                                         
Query: 16    gattgatgaagggatcaccattgacaagctccacaggctcaatcagaaaaacgtctcggc 75
             |||||| || |||||||||||||||||||| || |  ||||| ||||||||  |||| ||
Sbjct: 34823 gattgaggaggggatcaccattgacaagcttcataaactcaaccagaaaaatatctcagc 34882

                                                                         
Query: 76    atggaacatgaagaggctgatgaagattgttcgttttgggacgctcaccacaatggacga 135
              ||||||||||| ||| |||||| ||||||||| |||||||||||||| |||||||| ||
Sbjct: 34883 ttggaacatgaaaaggttgatgaggattgttcggtttgggacgctcacgacaatggatga 34942

                                                                         
Query: 136   gcagattcagcaggcaacgggagagggggacgagtcagcgacacagattcgcagcgaata 195
             |||||| |||||||||||||| |||||||| |||||||||||||||||||| || |||||
Sbjct: 34943 gcagatacagcaggcaacgggtgagggggatgagtcagcgacacagattcgtagtgaata 35002

                                                                         
Query: 196   tnaggcgcaggtggccgccaagaagatctttcataatgtggctaagcctggatccaagta 255
             | | ||  || | || ||||||||||||||||| |||||||| |||||||| ||||||||
Sbjct: 35003 tgaagccaagattgctgccaagaagatctttcacaatgtggcgaagcctggctccaagta 35062



 Score =  133 bits (67), Expect = 6e-28
 Identities = 78/82 (95%)
 Strand = Plus / Plus

                                                                         
Query: 376   ggtgaatgcatttanagagcgcaaagctcttgccctaacacttaatgatacaaaaactgc 435
             |||||||||||||| |||||||||||| |||||||||||||||||||||||||| |||||
Sbjct: 35849 ggtgaatgcatttagagagcgcaaagcccttgccctaacacttaatgatacaaagactgc 35908

                                   
Query: 436   agttaacaagctcaaccagatg 457
             ||| ||||||||||||||||||
Sbjct: 35909 agtgaacaagctcaaccagatg 35930



 Score =  107 bits (54), Expect = 3e-20
 Identities = 105/122 (86%)
 Strand = Plus / Plus

                                                                         
Query: 257   atatacttggcagacatgatgcgcttcatgaggcaggaggaagccatcaaagctatgcat 316
             ||||||||| ||||  || |||| |||||||||||||| |||||||||||| | ||| ||
Sbjct: 35386 atatacttgtcagatttgctgcgtttcatgaggcaggaagaagccatcaaaacaatggat 35445

                                                                         
Query: 317   ctttttgaaggggcacaggagcactgtagggtcagcaggaggtctctgaagaactgggtg 376
             ||||| ||||| |||||||||||| | ||||| |||| ||| ||||| ||||||||||||
Sbjct: 35446 cttttcgaaggagcacaggagcacagcagggttagcaagagatctctaaagaactgggtg 35505

               
Query: 377   gt 378
             ||
Sbjct: 35506 gt 35507
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>dbj|AP004139.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1486_E07
          Length = 110494

 Score =  224 bits (113), Expect = 2e-55
 Identities = 208/240 (86%)
 Strand = Plus / Plus

                                                                          
Query: 16     gattgatgaagggatcaccattgacaagctccacaggctcaatcagaaaaacgtctcggc 75
              |||||| || |||||||||||||||||||| || |  ||||| ||||||||  |||| ||
Sbjct: 110023 gattgaggaggggatcaccattgacaagcttcataaactcaaccagaaaaatatctcagc 110082

                                                                          
Query: 76     atggaacatgaagaggctgatgaagattgttcgttttgggacgctcaccacaatggacga 135
               ||||||||||| ||| |||||| ||||||||| |||||||||||||| |||||||| ||
Sbjct: 110083 ttggaacatgaaaaggttgatgaggattgttcggtttgggacgctcacgacaatggatga 110142

                                                                          
Query: 136    gcagattcagcaggcaacgggagagggggacgagtcagcgacacagattcgcagcgaata 195
              |||||| |||||||||||||| |||||||| |||||||||||||||||||| || |||||
Sbjct: 110143 gcagatacagcaggcaacgggtgagggggatgagtcagcgacacagattcgtagtgaata 110202

                                                                          
Query: 196    tnaggcgcaggtggccgccaagaagatctttcataatgtggctaagcctggatccaagta 255
              | | ||  || | || ||||||||||||||||| |||||||| |||||||| ||||||||
Sbjct: 110203 tgaagccaagattgctgccaagaagatctttcacaatgtggcgaagcctggctccaagta 110262
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>dbj|AK108411.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-142-H02, full
           insert sequence
          Length = 864

 Score =  224 bits (113), Expect = 2e-55
 Identities = 208/240 (86%)
 Strand = Plus / Plus

                                                                       
Query: 16  gattgatgaagggatcaccattgacaagctccacaggctcaatcagaaaaacgtctcggc 75
           |||||| || |||||||||||||||||||| || |  ||||| ||||||||  |||| ||
Sbjct: 408 gattgaggaggggatcaccattgacaagcttcataaactcaaccagaaaaatatctcagc 467

                                                                       
Query: 76  atggaacatgaagaggctgatgaagattgttcgttttgggacgctcaccacaatggacga 135
            ||||||||||| ||| |||||| ||||||||| |||||||||||||| |||||||| ||
Sbjct: 468 ttggaacatgaaaaggttgatgaggattgttcggtttgggacgctcacgacaatggatga 527

                                                                       
Query: 136 gcagattcagcaggcaacgggagagggggacgagtcagcgacacagattcgcagcgaata 195
           |||||| |||||||||||||| |||||||| |||||||||||||||||||| || |||||
Sbjct: 528 gcagatacagcaggcaacgggtgagggggatgagtcagcgacacagattcgtagtgaata 587

                                                                       
Query: 196 tnaggcgcaggtggccgccaagaagatctttcataatgtggctaagcctggatccaagta 255
           | | ||  || | || ||||||||||||||||| |||||||| |||||||| ||||||||
Sbjct: 588 tgaagccaagattgctgccaagaagatctttcacaatgtggcgaagcctggctccaagta 647
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>dbj|AK105878.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-204-C07, full
            insert sequence
          Length = 1638

 Score =  133 bits (67), Expect = 6e-28
 Identities = 78/82 (95%)
 Strand = Plus / Minus

                                                                        
Query: 376  ggtgaatgcatttanagagcgcaaagctcttgccctaacacttaatgatacaaaaactgc 435
            |||||||||||||| |||||||||||| |||||||||||||||||||||||||| |||||
Sbjct: 1416 ggtgaatgcatttagagagcgcaaagcccttgccctaacacttaatgatacaaagactgc 1357

                                  
Query: 436  agttaacaagctcaaccagatg 457
            ||| ||||||||||||||||||
Sbjct: 1356 agtgaacaagctcaaccagatg 1335
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>emb|AL606687.3|OSJN00087 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0084K11,
             complete sequence
          Length = 147806

 Score =  111 bits (56), Expect = 2e-21
 Identities = 107/124 (86%)
 Strand = Plus / Plus

                                                                         
Query: 255   acatatacttggcagacatgatgcgcttcatgaggcaggaggaagccatcaaagctatgc 314
             ||||||||||| | ||  ||||||| ||||||||||||||||||||  | ||||| ||| 
Sbjct: 73920 acatatacttgtcggatttgatgcgtttcatgaggcaggaggaagctctgaaagcaatgg 73979

                                                                         
Query: 315   atctttttgaaggggcacaggagcactgtagggtcagcaggaggtctctgaagaactggg 374
             ||||||||||||| ||||||||||||   |||||||||| |||||| || ||||||||||
Sbjct: 73980 atctttttgaaggcgcacaggagcacaacagggtcagcaagaggtcactcaagaactggg 74039

                 
Query: 375   tggt 378
             ||||
Sbjct: 74040 tggt 74043



 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 114/136 (83%)
 Strand = Plus / Plus

                                                                         
Query: 26    gggatcaccattgacaagctccacaggctcaatcagaaaaacgtctcggcatggaacatg 85
             |||||||| || ||| |||| |||||||| |  ||||| ||| |||| || |||| ||||
Sbjct: 73587 gggatcacgatcgaccagcttcacaggcttagccagaagaacatctcagcttggagcatg 73646

                                                                         
Query: 86    aagaggctgatgaagattgttcgttttgggacgctcaccacaatggacgagcagattcag 145
             |||||| ||||||||||||||||||  ||| |||| ||||| ||||||||||||||  ||
Sbjct: 73647 aagaggttgatgaagattgttcgttacggggcgctgaccaccatggacgagcagatcaag 73706

                             
Query: 146   caggcaacgggagagg 161
             || ||||| |||||||
Sbjct: 73707 catgcaaccggagagg 73722



 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 60/67 (89%)
 Strand = Plus / Plus

                                                                         
Query: 391   agagcgcaaagctcttgccctaacacttaatgatacaaaaactgcagttaacaagctcaa 450
             |||||||||||||||||| ||||| || || || |||||||||||||| ||||||||| |
Sbjct: 74148 agagcgcaaagctcttgctctaacgctcaacgacacaaaaactgcagtgaacaagctcca 74207

                    
Query: 451   ccagatg 457
             |||||||
Sbjct: 74208 ccagatg 74214
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score =  111 bits (56), Expect = 2e-21
 Identities = 107/124 (86%)
 Strand = Plus / Plus

                                                                            
Query: 255      acatatacttggcagacatgatgcgcttcatgaggcaggaggaagccatcaaagctatgc 314
                ||||||||||| | ||  ||||||| ||||||||||||||||||||  | ||||| ||| 
Sbjct: 28066694 acatatacttgtcggatttgatgcgtttcatgaggcaggaggaagctctgaaagcaatgg 28066753

                                                                            
Query: 315      atctttttgaaggggcacaggagcactgtagggtcagcaggaggtctctgaagaactggg 374
                ||||||||||||| ||||||||||||   |||||||||| |||||| || ||||||||||
Sbjct: 28066754 atctttttgaaggcgcacaggagcacaacagggtcagcaagaggtcactcaagaactggg 28066813

                    
Query: 375      tggt 378
                ||||
Sbjct: 28066814 tggt 28066817



 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 114/136 (83%)
 Strand = Plus / Plus

                                                                            
Query: 26       gggatcaccattgacaagctccacaggctcaatcagaaaaacgtctcggcatggaacatg 85
                |||||||| || ||| |||| |||||||| |  ||||| ||| |||| || |||| ||||
Sbjct: 28066361 gggatcacgatcgaccagcttcacaggcttagccagaagaacatctcagcttggagcatg 28066420

                                                                            
Query: 86       aagaggctgatgaagattgttcgttttgggacgctcaccacaatggacgagcagattcag 145
                |||||| ||||||||||||||||||  ||| |||| ||||| ||||||||||||||  ||
Sbjct: 28066421 aagaggttgatgaagattgttcgttacggggcgctgaccaccatggacgagcagatcaag 28066480

                                
Query: 146      caggcaacgggagagg 161
                || ||||| |||||||
Sbjct: 28066481 catgcaaccggagagg 28066496



 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 60/67 (89%)
 Strand = Plus / Plus

                                                                            
Query: 391      agagcgcaaagctcttgccctaacacttaatgatacaaaaactgcagttaacaagctcaa 450
                |||||||||||||||||| ||||| || || || |||||||||||||| ||||||||| |
Sbjct: 28066922 agagcgcaaagctcttgctctaacgctcaacgacacaaaaactgcagtgaacaagctcca 28066981

                       
Query: 451      ccagatg 457
                |||||||
Sbjct: 28066982 ccagatg 28066988
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>ref|NM_127253.1| Arabidopsis thaliana unknown protein AT2G17000 mRNA, complete cds
          Length = 2550

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 46/50 (92%)
 Strand = Plus / Plus

                                                              
Query: 56   aatcagaaaaacgtctcggcatggaacatgaagaggctgatgaagattgt 105
            |||||||||||||| || || |||||||||||||| ||||||||||||||
Sbjct: 1420 aatcagaaaaacgtttcagcttggaacatgaagagactgatgaagattgt 1469



 Score = 46.1 bits (23), Expect = 0.10
 Identities = 67/82 (81%)
 Strand = Plus / Plus

                                                                        
Query: 363  tgaagaactgggtggtgaatgcatttanagagcgcaaagctcttgccctaacacttaatg 422
            ||||||||||| |||| ||||| || | |||| | | ||| |||||| ||||||| ||||
Sbjct: 1724 tgaagaactggctggtaaatgctttcagagagagaagagcacttgccttaacactcaatg 1783

                                  
Query: 423  atacaaaaactgcagttaacaa 444
            | || ||||| ||||| |||||
Sbjct: 1784 acaccaaaacagcagtgaacaa 1805
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>gb|AC002354.2|AC002354 Arabidopsis thaliana chromosome II section 98 of 255 of the complete
             sequence. Sequence from clones F12A24, F6P23
          Length = 90952

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 46/50 (92%)
 Strand = Plus / Minus

                                                               
Query: 56    aatcagaaaaacgtctcggcatggaacatgaagaggctgatgaagattgt 105
             |||||||||||||| || || |||||||||||||| ||||||||||||||
Sbjct: 14835 aatcagaaaaacgtttcagcttggaacatgaagagactgatgaagattgt 14786



 Score = 46.1 bits (23), Expect = 0.10
 Identities = 50/59 (84%)
 Strand = Plus / Minus

                                                                        
Query: 47    cacaggctcaatcagaaaaacgtctcggcatggaacatgaagaggctgatgaagattgt 105
             |||||| | ||||| || ||| |||| || |||||||||||||| || |||||||||||
Sbjct: 18508 cacaggatgaatcataagaacatctctgcttggaacatgaagagactaatgaagattgt 18450
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>gb|AC007260.2| Arabidopsis thaliana chromosome I BAC T30F21 genomic sequence, complete
             sequence
          Length = 78378

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                   
Query: 218   aagatctttcataatgtggctaagcctggatccaagta 255
             ||||||||||||||||| |||||||| ||||| |||||
Sbjct: 20227 aagatctttcataatgttgctaagccaggatcaaagta 20264



 Score = 44.1 bits (22), Expect = 0.40
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 74    gcatggaacatgaagaggctgatgaa 99
             |||||||| |||||||||||||||||
Sbjct: 20086 gcatggaaaatgaagaggctgatgaa 20111
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>emb|AJ234472.1|HVU234472 Hordeum vulgare genomic DNA fragment; clone MWG0503
          Length = 654

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 80/98 (81%)
 Strand = Plus / Plus

                                                                       
Query: 281 ttcatgaggcaggaggaagccatcaaagctatgcatctttttgaaggggcacaggagcac 340
           ||||||||||||||||| ||  | ||||| ||| |||| || ||||| ||  ||||| ||
Sbjct: 457 ttcatgaggcaggaggaggctgtgaaagccatggatctcttcgaaggagccaaggagaac 516

                                                 
Query: 341 tgtagggtcagcaggaggtctctgaagaactgggtggt 378
              |||||||||| |||||| || ||||||||||||||
Sbjct: 517 aacagggtcagcaagaggtcgctcaagaactgggtggt 554



 Score = 46.1 bits (23), Expect = 0.10
 Identities = 56/67 (83%)
 Strand = Plus / Plus

                                                                       
Query: 42  agctccacaggctcaatcagaaaaacgtctcggcatggaacatgaagaggctgatgaaga 101
           ||||||||| ||| || ||||| ||| |||| || |||| |||||||||||| |||| ||
Sbjct: 139 agctccacaagctgaaccagaagaacatctctgcgtggagcatgaagaggctaatgagga 198

                  
Query: 102 ttgttcg 108
           | |||||
Sbjct: 199 tcgttcg 205



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 38/44 (86%)
 Strand = Plus / Plus

                                                       
Query: 212 gccaagaagatctttcataatgtggctaagcctggatccaagta 255
           ||||||||||| || || ||||| || || ||||||||||||||
Sbjct: 310 gccaagaagattttccacaatgtcgccaaacctggatccaagta 353
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>ref|NM_106508.2| Arabidopsis thaliana unknown protein AT1G78610 mRNA, complete cds
          Length = 2767

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                 
Query: 218  aagatctttcataatgtggctaagcctggatccaagt 254
            ||||||||||||||||| |||||||| ||||| ||||
Sbjct: 1606 aagatctttcataatgttgctaagccaggatcaaagt 1642



 Score = 46.1 bits (23), Expect = 0.10
 Identities = 43/50 (86%)
 Strand = Plus / Plus

                                                              
Query: 359  tctctgaagaactgggtggtgaatgcatttanagagcgcaaagctcttgc 408
            ||||| || ||||||||||||||||| |||| |||| | | |||||||||
Sbjct: 1747 tctcttaaaaactgggtggtgaatgcttttagagagagaagagctcttgc 1796



 Score = 44.1 bits (22), Expect = 0.40
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 74   gcatggaacatgaagaggctgatgaa 99
            |||||||| |||||||||||||||||
Sbjct: 1465 gcatggaaaatgaagaggctgatgaa 1490
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>ref|NM_104225.1| Arabidopsis thaliana unknown protein AT1G53470 mRNA, complete cds
          Length = 2646

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 40/45 (88%)
 Strand = Plus / Plus

                                                         
Query: 217  gaagatctttcataatgtggctaagcctggatccaagtacatata 261
            |||||| ||||| ||||| ||| |||||||||||| |||||||||
Sbjct: 1689 gaagatttttcagaatgttgctgagcctggatccaggtacatata 1733



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 67/83 (80%)
 Strand = Plus / Plus

                                                                        
Query: 361  tctgaagaactgggtggtgaatgcatttanagagcgcaaagctcttgccctaacacttaa 420
            ||||||||| |||||||| ||||| |||| ||| || | ||| || ||  ||||| | ||
Sbjct: 1833 tctgaagaattgggtggttaatgcctttagagaacgaagagcactagctttaacattaaa 1892

                                   
Query: 421  tgatacaaaaactgcagttaaca 443
             ||||||||||| ||||| ||||
Sbjct: 1893 cgatacaaaaacagcagtgaaca 1915
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>ref|NM_127254.3| Arabidopsis thaliana unknown protein AT2G17010 mRNA, complete cds
          Length = 2404

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 43/50 (86%)
 Strand = Plus / Plus

                                                              
Query: 56   aatcagaaaaacgtctcggcatggaacatgaagaggctgatgaagattgt 105
            ||||| || ||| |||| || |||||||||||||| || |||||||||||
Sbjct: 1234 aatcataagaacatctctgcttggaacatgaagagactaatgaagattgt 1283



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 68/84 (80%)
 Strand = Plus / Plus

                                                                        
Query: 365  aagaactgggtggtgaatgcatttanagagcgcaaagctcttgccctaacacttaatgat 424
            ||||||||| |||| ||||| || | ||||||   |||||||||||| ||||| || || 
Sbjct: 1540 aagaactggctggtcaatgctttcagagagcgacgagctcttgccctgacactcaacgac 1599

                                    
Query: 425  acaaaaactgcagttaacaagctc 448
            || || || ||||| |||||||||
Sbjct: 1600 accaagacagcagtgaacaagctc 1623
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>gb|AC090469.9| Homo sapiens chromosome 11, clone RP11-734J23, complete sequence
          Length = 215308

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 108    gttttgggacgctcaccacaatgga 132
              ||||||||| |||||||||||||||
Sbjct: 214986 gttttgggatgctcaccacaatgga 215010
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>emb|CR788255.6| Zebrafish DNA sequence from clone DKEY-9C18 in linkage group 2, complete
              sequence
          Length = 210464

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 425    acaaaaactgcagttaacaag 445
              |||||||||||||||||||||
Sbjct: 121443 acaaaaactgcagttaacaag 121463
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>gb|AC024260.4|AC024260 Arabidopsis thaliana chromosome 1 BAC F22G10 genomic sequence, complete
              sequence
          Length = 111936

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                           
Query: 217    gaagatctttcataatgtggctaagcctggatccaagtacatata 261
              |||||| ||||| ||||| ||| |||||||||||| ||| |||||
Sbjct: 111910 gaagatttttcagaatgttgctgagcctggatccaggtatatata 111866
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>gb|AC090156.10| Homo sapiens chromosome 11, clone RP11-202M19, complete sequence
          Length = 45120

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 108  gttttgggacgctcaccacaatgga 132
            ||||||||| |||||||||||||||
Sbjct: 4839 gttttgggatgctcaccacaatgga 4863
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>gb|AC018748.3|T3F20 Sequence of BAC T3F20 from Arabidopsis thaliana chromosome 1, complete
             sequence
          Length = 99960

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                          
Query: 217   gaagatctttcataatgtggctaagcctggatccaagtacatata 261
             |||||| ||||| ||||| ||| |||||||||||| ||| |||||
Sbjct: 70816 gaagatttttcagaatgttgctgagcctggatccaggtatatata 70772
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>dbj|AK130395.1| Homo sapiens cDNA FLJ26885 fis, clone PRS09304
          Length = 1670

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 313  gcatctttttgaaggggcaca 333
            |||||||||||||||||||||
Sbjct: 1249 gcatctttttgaaggggcaca 1229
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>gb|AC008659.5| Homo sapiens chromosome 5 clone CTB-26E19, complete sequence
          Length = 184981

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 313    gcatctttttgaaggggcaca 333
              |||||||||||||||||||||
Sbjct: 143664 gcatctttttgaaggggcaca 143684
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>gb|AC182700.2| Populus trichocarpa clone Pop1-73H20, complete sequence
          Length = 90044

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 413   acacttaatgatacaaaaactgcagttaacaa 444
             ||||| ||||| ||||||||||| ||||||||
Sbjct: 25319 acactgaatgacacaaaaactgctgttaacaa 25350
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>gb|BC058534.1| Mus musculus RIKEN cDNA A830091I15 gene, mRNA (cDNA clone MGC:67205
            IMAGE:6834056), complete cds
          Length = 4102

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 283  catgaggcaggaggaagcca 302
            ||||||||||||||||||||
Sbjct: 2884 catgaggcaggaggaagcca 2865
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>ref|NM_172795.2| Mus musculus RIKEN cDNA A830091I15 gene (A830091I15Rik), mRNA
          Length = 4102

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 283  catgaggcaggaggaagcca 302
            ||||||||||||||||||||
Sbjct: 2884 catgaggcaggaggaagcca 2865
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>gb|BC057547.1| Mus musculus RIKEN cDNA A830091I15 gene, mRNA (cDNA clone
            IMAGE:6407106), **** WARNING: chimeric clone ****
          Length = 3656

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 283  catgaggcaggaggaagcca 302
            ||||||||||||||||||||
Sbjct: 1309 catgaggcaggaggaagcca 1290
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>gb|BC052098.1| Mus musculus RIKEN cDNA A830091I15 gene, mRNA (cDNA clone
            IMAGE:5695587), containing frame-shift errors
          Length = 3747

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 283  catgaggcaggaggaagcca 302
            ||||||||||||||||||||
Sbjct: 2583 catgaggcaggaggaagcca 2564
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>gb|AC074327.6| Homo sapiens chromosome 10 clone RP11-556E13, complete sequence
          Length = 189250

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 44    ctccacaggctcaatcagaa 63
             ||||||||||||||||||||
Sbjct: 67457 ctccacaggctcaatcagaa 67476
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>emb|AL354695.12| Human DNA sequence from clone RP11-265G8 on chromosome 10 Contains a
             high-mobility group nucleosome binding domain 1 (HMGN1)
             pseudogene, a pseudogene similar to part of ATPase, Ca++
             transporting cardiac muscle slow twitch 2 (ATP2A2) and the
             gene for a novel protein, complete sequence
          Length = 125859

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 418   taatgatacaaaaactgcag 437
             ||||||||||||||||||||
Sbjct: 56902 taatgatacaaaaactgcag 56921
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>emb|AL121934.18|HSBA209A2 Human DNA sequence from clone RP11-209A2 on chromosome 6 Contains a 60S
             ribosomal protein L10 (RPL10) pseudogene, STSs and GSSs,
             complete sequence
          Length = 49261

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 212   gccaagaagatctttcataa 231
             ||||||||||||||||||||
Sbjct: 32197 gccaagaagatctttcataa 32178
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>emb|BX572091.1| Prochlorococcus marinus MED4 complete genome; segment 2/5
          Length = 349082

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 316    tctttttgaaggggcacagg 335
              ||||||||||||||||||||
Sbjct: 129174 tctttttgaaggggcacagg 129155
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>gb|AC153837.4| Mus musculus 6 BAC RP23-192D5 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 232039

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 412    aacacttaatgatacaaaaa 431
              ||||||||||||||||||||
Sbjct: 166193 aacacttaatgatacaaaaa 166212
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>emb|AL591177.14| Mouse DNA sequence from clone RP23-399H5 on chromosome 11, complete
             sequence
          Length = 193004

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 283   catgaggcaggaggaagcca 302
             ||||||||||||||||||||
Sbjct: 13570 catgaggcaggaggaagcca 13589
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>dbj|AP008230.1| Desulfitobacterium hafniense Y51 genomic DNA, complete genome
          Length = 5727534

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 13      gaggattgatgaagggatca 32
               ||||||||||||||||||||
Sbjct: 1855759 gaggattgatgaagggatca 1855740
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>gb|AC016654.6| Homo sapiens chromosome 5 clone RP1-31E24, complete sequence
          Length = 27134

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 285   tgaggcaggaggaagccatc 304
             ||||||||||||||||||||
Sbjct: 18513 tgaggcaggaggaagccatc 18532
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>dbj|AK044113.1| Mus musculus 10 days neonate cortex cDNA, RIKEN full-length enriched
            library, clone:A830091I15 product:hypothetical
            Gram-positive cocci surface protein 'anchoring'
            hexapeptide/TIR domain containing protein, full insert
            sequence
          Length = 2498

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 283  catgaggcaggaggaagcca 302
            ||||||||||||||||||||
Sbjct: 1274 catgaggcaggaggaagcca 1255
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>gb|AC150263.4| Aedes aegypti, clone XX-44H3, complete sequence
          Length = 131682

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 325    aggggcacaggagcactgta 344
              ||||||||||||||||||||
Sbjct: 131447 aggggcacaggagcactgta 131428
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>dbj|AK172964.1| Mus musculus premature mRNA for mKIAA0524 protein
          Length = 4344

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 283  catgaggcaggaggaagcca 302
            ||||||||||||||||||||
Sbjct: 3200 catgaggcaggaggaagcca 3181
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>gb|AC016549.8| Homo sapiens chromosome 5 clone CTC-250P22, complete sequence
          Length = 167830

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 285    tgaggcaggaggaagccatc 304
              ||||||||||||||||||||
Sbjct: 157892 tgaggcaggaggaagccatc 157873
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>emb|AL627327.29| Mouse DNA sequence from clone RP23-62O17 on chromosome 4, complete
              sequence
          Length = 249562

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 16     gattgatgaagggatcacca 35
              ||||||||||||||||||||
Sbjct: 173857 gattgatgaagggatcacca 173838
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>gb|BC080850.1| Mus musculus RIKEN cDNA A830091I15 gene, mRNA (cDNA clone MGC:90760
            IMAGE:6849138), complete cds
          Length = 4102

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 283  catgaggcaggaggaagcca 302
            ||||||||||||||||||||
Sbjct: 2937 catgaggcaggaggaagcca 2918
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>emb|BX571970.20| Zebrafish DNA sequence from clone DKEY-276G11 in linkage group 7,
             complete sequence
          Length = 170614

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 412   aacacttaatgatacaaaaa 431
             ||||||||||||||||||||
Sbjct: 76463 aacacttaatgatacaaaaa 76444
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>gb|AC002324.1|AC002324 Mus musculus chromosome 11, clone 475_H_14, complete sequence
          Length = 171952

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 283   catgaggcaggaggaagcca 302
             ||||||||||||||||||||
Sbjct: 71419 catgaggcaggaggaagcca 71400


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,501,362
Number of Sequences: 3902068
Number of extensions: 4501362
Number of successful extensions: 70319
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 70167
Number of HSP's gapped (non-prelim): 146
length of query: 464
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 442
effective length of database: 17,147,199,772
effective search space: 7579062299224
effective search space used: 7579062299224
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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