| Clone Name | baal22i08 |
|---|---|
| Clone Library Name | barley_pub |
>emb|X82937.1|HVRNAJIP H.vulgare mRNA for jasmonate induced protein Length = 1334 Score = 591 bits (298), Expect = e-166 Identities = 298/298 (100%) Strand = Plus / Plus Query: 1 cttacatcatgtcaggtgacctagttgatttaagtccagggcagttgcataagctagccg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 67 cttacatcatgtcaggtgacctagttgatttaagtccagggcagttgcataagctagccg 126 Query: 61 atctgatccatcgacaagaagtccagaagcttcaagagctcgagttcaactcgtatgcag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127 atctgatccatcgacaagaagtccagaagcttcaagagctcgagttcaactcgtatgcag 186 Query: 121 agcaacaaaagtatctccgtgacgccaatgatgcccgcgataaggtgtatcacatccttg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 187 agcaacaaaagtatctccgtgacgccaatgatgcccgcgataaggtgtatcacatccttg 246 Query: 181 acagtgcacgggacatgatagcacaaaccgaggctgagaaggatgccaccaagcaagata 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 247 acagtgcacgggacatgatagcacaaaccgaggctgagaaggatgccaccaagcaagata 306 Query: 241 ttggcaaggatgtctatgactactgcaccaaggccatcggaatatctctccaattcat 298 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 307 ttggcaaggatgtctatgactactgcaccaaggccatcggaatatctctccaattcat 364
>gb|AC163992.9| Mus musculus chromosome 1, clone RP23-193H10, complete sequence Length = 198062 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 tagttgatttaagtccaggg 41 |||||||||||||||||||| Sbjct: 120328 tagttgatttaagtccaggg 120347
>ref|XM_457812.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0C03498g) partial mRNA Length = 3774 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 228 accaagcaagatattggcaa 247 |||||||||||||||||||| Sbjct: 1747 accaagcaagatattggcaa 1766
>ref|XM_781740.1| PREDICTED: Strongylocentrotus purpuratus similar to aldehyde dehydrogenase 2, like (LOC581754), mRNA Length = 1767 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 49 ataagctagccgatctgatc 68 |||||||||||||||||||| Sbjct: 527 ataagctagccgatctgatc 546
>emb|CR382135.1| Debaryomyces hansenii chromosome C of strain CBS767 of Debaryomyces hansenii Length = 1592360 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 228 accaagcaagatattggcaa 247 |||||||||||||||||||| Sbjct: 281073 accaagcaagatattggcaa 281092
>emb|AL645823.12| Mouse DNA sequence from clone RP23-288I22 on chromosome 11 Contains the Gabra6 gene for subunit alpha 6 gamma-aminobutyric acid (GABA-A) receptor, complete sequence Length = 132024 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 234 caagatattggcaaggatgt 253 |||||||||||||||||||| Sbjct: 120263 caagatattggcaaggatgt 120244
>gb|AC021205.6| Homo sapiens BAC clone RP11-170N16 from 4, complete sequence Length = 178917 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 279 ggaatatctctccaattcat 298 |||||||||||||||||||| Sbjct: 97894 ggaatatctctccaattcat 97913
>gb|AC157217.2| Pan troglodytes BAC clone CH251-305B5 from chromosome unknown, complete sequence Length = 159245 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 279 ggaatatctctccaattcat 298 |||||||||||||||||||| Sbjct: 67066 ggaatatctctccaattcat 67047 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,900,378 Number of Sequences: 3902068 Number of extensions: 1900378 Number of successful extensions: 36104 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 8 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 36091 Number of HSP's gapped (non-prelim): 13 length of query: 298 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 276 effective length of database: 17,147,199,772 effective search space: 4732627137072 effective search space used: 4732627137072 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)