| Clone Name | baal22g22 |
|---|---|
| Clone Library Name | barley_pub |
>GUN5_THEFU (Q01786) Endoglucanase E-5 precursor (EC 3.2.1.4)| (Endo-1,4-beta-glucanase E-4) (Cellulase E-5) (Cellulase E5) Length = 466 Score = 28.9 bits (63), Expect = 3.5 Identities = 17/59 (28%), Positives = 28/59 (47%) Frame = -2 Query: 239 YSILITKRR*KTSTVTFFLLQITVQEFST*LDVWNISVSVAERRSTSAAASWLRSSRPG 63 YS +T R +STV+ + + +T+ +T VWN + + T SW + PG Sbjct: 53 YSASVTVRNDTSSTVSQWEVVLTLPGGTTVAQVWNAQHTSSGNSHTFTGVSWNSTIPPG 111
>THIE_NEIMB (Q9JXF7) Thiamine-phosphate pyrophosphorylase (EC 2.5.1.3) (TMP| pyrophosphorylase) (TMP-PPase) (Thiamine-phosphate synthase) Length = 205 Score = 28.1 bits (61), Expect = 6.0 Identities = 16/36 (44%), Positives = 20/36 (55%) Frame = -1 Query: 111 EEYLSGS*LAAIFTXGLRIGLSHMSATTLDDMLPEH 4 +E + + LAAI GLR+GLS S LD L H Sbjct: 84 QEDMDTADLAAIAAAGLRLGLSTHSVAELDRALSVH 119
>THIE_NEIMA (Q9JWI2) Thiamine-phosphate pyrophosphorylase (EC 2.5.1.3) (TMP| pyrophosphorylase) (TMP-PPase) (Thiamine-phosphate synthase) Length = 205 Score = 28.1 bits (61), Expect = 6.0 Identities = 16/36 (44%), Positives = 20/36 (55%) Frame = -1 Query: 111 EEYLSGS*LAAIFTXGLRIGLSHMSATTLDDMLPEH 4 +E + + LAAI GLR+GLS S LD L H Sbjct: 84 QEDMDTADLAAIAAAGLRLGLSTHSVAELDRALSVH 119
>LRP1B_MOUSE (Q9JI18) Low-density lipoprotein receptor-related protein 1B| precursor (Low-density lipoprotein receptor-related protein-deleted in tumor) (LRP-DIT) Length = 4599 Score = 27.7 bits (60), Expect = 7.9 Identities = 13/38 (34%), Positives = 19/38 (50%) Frame = +3 Query: 90 SCR*GTPPLCYRNTYIPHVQLCTEFLHCNL*QEKCNCR 203 SCR G P CY +PH +LC C ++ +C+ Sbjct: 2551 SCRSGFKP-CYNRRCVPHGKLCDGTNDCGDSSDELDCK 2587
>LRP1B_HUMAN (Q9NZR2) Low-density lipoprotein receptor-related protein 1B| precursor (Low-density lipoprotein receptor-related protein-deleted in tumor) (LRP-DIT) Length = 4599 Score = 27.7 bits (60), Expect = 7.9 Identities = 14/38 (36%), Positives = 19/38 (50%) Frame = +3 Query: 90 SCR*GTPPLCYRNTYIPHVQLCTEFLHCNL*QEKCNCR 203 SCR G P CY IPH +LC C ++ +C+ Sbjct: 2551 SCRRGFKP-CYNRRCIPHGKLCDGENDCGDNSDELDCK 2587
>SYL_BORPA (Q7W9M4) Leucyl-tRNA synthetase (EC 6.1.1.4) (Leucine--tRNA ligase)| (LeuRS) Length = 885 Score = 27.7 bits (60), Expect = 7.9 Identities = 14/53 (26%), Positives = 25/53 (47%) Frame = -1 Query: 255 YFKNYLQHSHNQT*VENIDSYIFPVTNYSAGIQYIIGRVEYKCFGSRAEEYLS 97 YF Y ++Q V+ + Y P+ Y GI++ + + Y F ++ LS Sbjct: 519 YFMRYTSPDNDQAMVDARNDYWMPMDQYIGGIEHAVLHLLYARFWTKVMRDLS 571
>CD37_HUMAN (P11049) Leukocyte antigen CD37 (Tetraspanin-26) (Tspan-26)| Length = 281 Score = 27.7 bits (60), Expect = 7.9 Identities = 13/43 (30%), Positives = 27/43 (62%) Frame = -2 Query: 281 FFTKILILFISKITYSILITKRR*KTSTVTFFLLQITVQEFST 153 +F +L+LF ++IT ILI+ +R + +++ T+Q++ T Sbjct: 90 YFGMLLLLFATQITLGILISTQRAQLERSLRDVVEKTIQKYGT 132 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 40,507,859 Number of Sequences: 219361 Number of extensions: 742649 Number of successful extensions: 1738 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 1703 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1738 length of database: 80,573,946 effective HSP length: 70 effective length of database: 65,218,676 effective search space used: 1565248224 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)