ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal22g22
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1GUN5_THEFU (Q01786) Endoglucanase E-5 precursor (EC 3.2.1.4) (En... 29 3.5
2THIE_NEIMB (Q9JXF7) Thiamine-phosphate pyrophosphorylase (EC 2.5... 28 6.0
3THIE_NEIMA (Q9JWI2) Thiamine-phosphate pyrophosphorylase (EC 2.5... 28 6.0
4LRP1B_MOUSE (Q9JI18) Low-density lipoprotein receptor-related pr... 28 7.9
5LRP1B_HUMAN (Q9NZR2) Low-density lipoprotein receptor-related pr... 28 7.9
6SYL_BORPA (Q7W9M4) Leucyl-tRNA synthetase (EC 6.1.1.4) (Leucine-... 28 7.9
7CD37_HUMAN (P11049) Leukocyte antigen CD37 (Tetraspanin-26) (Tsp... 28 7.9

>GUN5_THEFU (Q01786) Endoglucanase E-5 precursor (EC 3.2.1.4)|
           (Endo-1,4-beta-glucanase E-4) (Cellulase E-5) (Cellulase
           E5)
          Length = 466

 Score = 28.9 bits (63), Expect = 3.5
 Identities = 17/59 (28%), Positives = 28/59 (47%)
 Frame = -2

Query: 239 YSILITKRR*KTSTVTFFLLQITVQEFST*LDVWNISVSVAERRSTSAAASWLRSSRPG 63
           YS  +T R   +STV+ + + +T+   +T   VWN   + +    T    SW  +  PG
Sbjct: 53  YSASVTVRNDTSSTVSQWEVVLTLPGGTTVAQVWNAQHTSSGNSHTFTGVSWNSTIPPG 111



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>THIE_NEIMB (Q9JXF7) Thiamine-phosphate pyrophosphorylase (EC 2.5.1.3) (TMP|
           pyrophosphorylase) (TMP-PPase) (Thiamine-phosphate
           synthase)
          Length = 205

 Score = 28.1 bits (61), Expect = 6.0
 Identities = 16/36 (44%), Positives = 20/36 (55%)
 Frame = -1

Query: 111 EEYLSGS*LAAIFTXGLRIGLSHMSATTLDDMLPEH 4
           +E +  + LAAI   GLR+GLS  S   LD  L  H
Sbjct: 84  QEDMDTADLAAIAAAGLRLGLSTHSVAELDRALSVH 119



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>THIE_NEIMA (Q9JWI2) Thiamine-phosphate pyrophosphorylase (EC 2.5.1.3) (TMP|
           pyrophosphorylase) (TMP-PPase) (Thiamine-phosphate
           synthase)
          Length = 205

 Score = 28.1 bits (61), Expect = 6.0
 Identities = 16/36 (44%), Positives = 20/36 (55%)
 Frame = -1

Query: 111 EEYLSGS*LAAIFTXGLRIGLSHMSATTLDDMLPEH 4
           +E +  + LAAI   GLR+GLS  S   LD  L  H
Sbjct: 84  QEDMDTADLAAIAAAGLRLGLSTHSVAELDRALSVH 119



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>LRP1B_MOUSE (Q9JI18) Low-density lipoprotein receptor-related protein 1B|
            precursor (Low-density lipoprotein receptor-related
            protein-deleted in tumor) (LRP-DIT)
          Length = 4599

 Score = 27.7 bits (60), Expect = 7.9
 Identities = 13/38 (34%), Positives = 19/38 (50%)
 Frame = +3

Query: 90   SCR*GTPPLCYRNTYIPHVQLCTEFLHCNL*QEKCNCR 203
            SCR G  P CY    +PH +LC     C    ++ +C+
Sbjct: 2551 SCRSGFKP-CYNRRCVPHGKLCDGTNDCGDSSDELDCK 2587



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>LRP1B_HUMAN (Q9NZR2) Low-density lipoprotein receptor-related protein 1B|
            precursor (Low-density lipoprotein receptor-related
            protein-deleted in tumor) (LRP-DIT)
          Length = 4599

 Score = 27.7 bits (60), Expect = 7.9
 Identities = 14/38 (36%), Positives = 19/38 (50%)
 Frame = +3

Query: 90   SCR*GTPPLCYRNTYIPHVQLCTEFLHCNL*QEKCNCR 203
            SCR G  P CY    IPH +LC     C    ++ +C+
Sbjct: 2551 SCRRGFKP-CYNRRCIPHGKLCDGENDCGDNSDELDCK 2587



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>SYL_BORPA (Q7W9M4) Leucyl-tRNA synthetase (EC 6.1.1.4) (Leucine--tRNA ligase)|
           (LeuRS)
          Length = 885

 Score = 27.7 bits (60), Expect = 7.9
 Identities = 14/53 (26%), Positives = 25/53 (47%)
 Frame = -1

Query: 255 YFKNYLQHSHNQT*VENIDSYIFPVTNYSAGIQYIIGRVEYKCFGSRAEEYLS 97
           YF  Y    ++Q  V+  + Y  P+  Y  GI++ +  + Y  F ++    LS
Sbjct: 519 YFMRYTSPDNDQAMVDARNDYWMPMDQYIGGIEHAVLHLLYARFWTKVMRDLS 571



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>CD37_HUMAN (P11049) Leukocyte antigen CD37 (Tetraspanin-26) (Tspan-26)|
          Length = 281

 Score = 27.7 bits (60), Expect = 7.9
 Identities = 13/43 (30%), Positives = 27/43 (62%)
 Frame = -2

Query: 281 FFTKILILFISKITYSILITKRR*KTSTVTFFLLQITVQEFST 153
           +F  +L+LF ++IT  ILI+ +R +       +++ T+Q++ T
Sbjct: 90  YFGMLLLLFATQITLGILISTQRAQLERSLRDVVEKTIQKYGT 132


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 40,507,859
Number of Sequences: 219361
Number of extensions: 742649
Number of successful extensions: 1738
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1703
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1738
length of database: 80,573,946
effective HSP length: 70
effective length of database: 65,218,676
effective search space used: 1565248224
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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