>CARB_PSEPK (Q88DU6) Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)|
           (Carbamoyl-phosphate synthetase ammonia chain)
          Length = 1073

 Score = 30.0 bits (66), Expect = 1.5
 Identities = 14/36 (38%), Positives = 23/36 (63%)
 Frame = -3

Query: 142 SHVIGARTFSLIYALHELLELRQYIRQAAIPKHDRP 35
           S+V+G R   ++Y   EL EL++Y+R+A    +D P
Sbjct: 716 SYVLGGRAMEIVY---ELDELKRYLREAVQVSNDSP 748

>AT10A_HUMAN (O60312) Probable phospholipid-transporting ATPase VA (EC 3.6.3.1)|
           (ATPVA) (Aminophospholipid translocase VA)
          Length = 1499

 Score = 30.0 bits (66), Expect = 1.5
 Identities = 18/42 (42%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
 Frame = +1

Query: 4   GPHPRRRRPDG---VDRASEWPPVGCIGGAPGAHEGRKSRRR 120
           GP  RRRR +G     R++  PP G    A GA +G + RRR
Sbjct: 12  GPPGRRRRREGRTRTVRSNLLPPPGAEDPAAGAAKGERRRRR 53

>MYO1_SCHPO (Q9Y7Z8) Myosin-1|
          Length = 1217

 Score = 29.6 bits (65), Expect = 2.0
 Identities = 18/50 (36%), Positives = 28/50 (56%)
 Frame = +1

Query: 136 HGSYPSSDSAFSPRSQRFNFVKAHYHIEWQIGLRRWFIVLHTASSCSWSI 285
           H    ++DSAF+   QR NF+ ++ H E +   +  FIV H A   ++SI
Sbjct: 496 HADSAAADSAFA---QRLNFLSSNPHFEQR---QNQFIVKHYAGDVTYSI 539

>VIT_BOMMO (Q27309) Vitellogenin precursor [Contains: Vitellin light chain|
           (VL); Vitellin light chain rare isoform; Vitellin heavy
           chain rare isoform; Vitellin heavy chain (VH)]
          Length = 1782

 Score = 29.6 bits (65), Expect = 2.0
 Identities = 17/58 (29%), Positives = 25/58 (43%)
 Frame = +1

Query: 40  DRASEWPPVGCIGGAPGAHEGRKSRRRFERL*HGSYPSSDSAFSPRSQRFNFVKAHYH 213
           D  +EWP  G +  A        +++  +      Y SS S+ S  S  FNF + H H
Sbjct: 304 DSGAEWPRAGAMRPAQSILYSLSTKQMTKH-----YESSSSSSSSESHEFNFPEQHEH 356

>VTFP_BPT7 (P03748) Tail fiber protein|
          Length = 553

 Score = 29.3 bits (64), Expect = 2.6
 Identities = 12/22 (54%), Positives = 16/22 (72%)
 Frame = +2

Query: 128 AYDMALIQAQIRHLAQEVRDLT 193
           AYD+ + Q Q  H+A+E RDLT
Sbjct: 96  AYDLNVAQIQTMHVAEEARDLT 117

>VTFP_BPT3 (P10308) Tail fiber protein|
          Length = 557

 Score = 29.3 bits (64), Expect = 2.6
 Identities = 12/22 (54%), Positives = 16/22 (72%)
 Frame = +2

Query: 128 AYDMALIQAQIRHLAQEVRDLT 193
           AYD+ + Q Q  H+A+E RDLT
Sbjct: 96  AYDLNVAQIQTMHVAEEARDLT 117

>DRE2D_ARATH (Q9LQZ2) Putative dehydration-responsive element-binding protein 2D|
           (DREB2D protein)
          Length = 206

 Score = 28.9 bits (63), Expect = 3.4
 Identities = 16/46 (34%), Positives = 20/46 (43%)
 Frame = +1

Query: 37  VDRASEWPPVGCIGGAPGAHEGRKSRRRFERL*HGSYPSSDSAFSP 174
           +D +S W       G P  HEG     RF+    G Y + DS  SP
Sbjct: 160 MDDSSIWEEATMSLGFPWVHEGDNDISRFDTCISGGYSNWDSFHSP 205

>RECQ5_HUMAN (O94762) ATP-dependent DNA helicase Q5 (EC 3.6.1.-) (RecQ|
           protein-like 5) (RecQ5)
          Length = 991

 Score = 28.5 bits (62), Expect = 4.4
 Identities = 21/60 (35%), Positives = 26/60 (43%), Gaps = 7/60 (11%)
 Frame = +1

Query: 1   QGPHPRRRRPDGVDRASEWPPVGCIGGAPG-------AHEGRKSRRRFERL*HGSYPSSD 159
           Q P   RRR + ++R+S W    CIG + G          GRK    F R   GS  S D
Sbjct: 435 QNPTAVRRRLEALERSSSWSKT-CIGPSQGNGFDPELYEGGRKGYGDFSRYDEGSGGSGD 493

>CARB2_AQUAE (O67233) Carbamoyl-phosphate synthase large chain, C-terminal|
           section (EC 6.3.5.5) (Carbamoyl-phosphate synthetase
           ammonia chain)
          Length = 537

 Score = 28.5 bits (62), Expect = 4.4
 Identities = 12/36 (33%), Positives = 22/36 (61%)
 Frame = -3

Query: 142 SHVIGARTFSLIYALHELLELRQYIRQAAIPKHDRP 35
           S+V+G R   ++Y   +  EL++Y+ +A    H+RP
Sbjct: 160 SYVLGGRAMRIVY---DEEELKEYLEEAVSVSHERP 192

>CEP63_HUMAN (Q96MT8) Centrosomal protein of 63 kDa (Cep63 protein)|
          Length = 703

 Score = 28.5 bits (62), Expect = 4.4
 Identities = 15/43 (34%), Positives = 29/43 (67%), Gaps = 2/43 (4%)
 Frame = +2

Query: 77  AELQELMKGVNQGEGSSAYDMALIQAQIRHLAQEV--RDLTLS 199
           AE+++L + + QGE S +  +  ++ +I HL QE+  RD+T++
Sbjct: 390 AEIKKLKEQILQGEQSYSSALEGMKMEISHLTQELHQRDITIA 432

>MUTS_NITOC (Q3JCL5) DNA mismatch repair protein mutS|
          Length = 863

 Score = 28.1 bits (61), Expect = 5.8
 Identities = 14/29 (48%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
 Frame = +2

Query: 113 GEGSSAYD-MALIQAQIRHLAQEVRDLTL 196
           G G+S +D ++L  A + HLA +VR LTL
Sbjct: 702 GRGTSTFDGLSLAWAVVSHLANKVRSLTL 730

>PUR4_ARATH (Q9M8D3) Probable phosphoribosylformylglycinamidine synthase,|
           chloroplast precursor (EC 6.3.5.3) (FGAM synthase)
           (FGAMS) (Formylglycinamide ribotide amidotransferase)
           (FGARAT) (Formylglycinamide ribotide synthetase)
          Length = 1387

 Score = 28.1 bits (61), Expect = 5.8
 Identities = 16/45 (35%), Positives = 23/45 (51%)
 Frame = +2

Query: 11  ILVGAGLTGSIVLRNGRLSDVLAELQELMKGVNQGEGSSAYDMAL 145
           + VG  LT  +  +   LSDV A    +     +GEGS+ YD A+
Sbjct: 802 LAVGEALTNLVWAKVTALSDVKASGNWMYAAKLEGEGSAMYDAAI 846

>SYC_PORGI (Q7MTR6) Cysteinyl-tRNA synthetase (EC 6.1.1.16) (Cysteine--tRNA|
           ligase) (CysRS)
          Length = 490

 Score = 27.7 bits (60), Expect = 7.5
 Identities = 11/24 (45%), Positives = 17/24 (70%)
 Frame = +1

Query: 139 GSYPSSDSAFSPRSQRFNFVKAHY 210
           G++PS + A+SP + RF  + AHY
Sbjct: 300 GAHPSLNKAYSPMTIRFFILGAHY 323

>MUTS_XANAC (Q8PMX2) DNA mismatch repair protein mutS|
          Length = 902

 Score = 27.7 bits (60), Expect = 7.5
 Identities = 16/29 (55%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
 Frame = +2

Query: 113 GEGSSAYD-MALIQAQIRHLAQEVRDLTL 196
           G G+S YD +AL  A  RHLAQ  R  TL
Sbjct: 736 GRGTSTYDGLALADAVARHLAQTNRCYTL 764

>MUTS_BACHD (Q9KAC0) DNA mismatch repair protein mutS|
          Length = 865

 Score = 27.7 bits (60), Expect = 7.5
 Identities = 15/29 (51%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
 Frame = +2

Query: 113 GEGSSAYD-MALIQAQIRHLAQEVRDLTL 196
           G G+S YD MAL QA I ++  E+R  TL
Sbjct: 687 GRGTSTYDGMALAQAIIEYIHDEIRAKTL 715

>IF2_STRAW (Q82K53) Translation initiation factor IF-2|
          Length = 1046

 Score = 27.7 bits (60), Expect = 7.5
 Identities = 14/29 (48%), Positives = 15/29 (51%)
 Frame = -2

Query: 104 RPS*APGAPPIHPTGGHSEARSTPSGLRR 18
           RP   PG  P  P GG   AR TP G+ R
Sbjct: 263 RPQGGPGGAP-RPQGGPGGARPTPGGMPR 290

>LPP_HUMAN (Q93052) Lipoma-preferred partner (LIM domain-containing preferred|
           translocation partner in lipoma)
          Length = 612

 Score = 27.3 bits (59), Expect = 9.8
 Identities = 11/17 (64%), Positives = 12/17 (70%)
 Frame = -2

Query: 101 PS*APGAPPIHPTGGHS 51
           P  AP APP+ P GGHS
Sbjct: 359 PVSAPCAPPLQPKGGHS 375

>MYH14_HUMAN (Q7Z406) Myosin-14 (Myosin heavy chain, nonmuscle IIc) (Nonmuscle|
            myosin heavy chain IIc) (NMHC II-C)
          Length = 1995

 Score = 27.3 bits (59), Expect = 9.8
 Identities = 14/48 (29%), Positives = 25/48 (52%)
 Frame = +2

Query: 59   RLSDVLAELQELMKGVNQGEGSSAYDMALIQAQIRHLAQEVRDLTLSK 202
            +L   L EL+  M    QG+  +   +  +QAQ++ L +EV +   S+
Sbjct: 1638 KLEGELEELKAQMASAGQGKEEAVKQLRKMQAQMKELWREVEETRTSR 1685


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 49,460,907
Number of Sequences: 219361
Number of extensions: 937516
Number of successful extensions: 2995
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 2878
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2994
length of database: 80,573,946
effective HSP length: 83
effective length of database: 62,366,983
effective search space used: 1496807592
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)