| Clone Name | baal22g04 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY236227.1| Oryza sativa (indica cultivar-group) alanine aminotransferase mRNA, complete cds Length = 1558 Score = 472 bits (238), Expect = e-130 Identities = 361/402 (89%) Strand = Plus / Plus Query: 84 gggaggaaggcgctggactacgaggagctcaacgagaacgtcaagaaggtgcagtacgcc 143 ||||||||| ||||||||||||||||||| ||||||||||| ||||||||||||||||| Sbjct: 64 gggaggaagccgctggactacgaggagctgaacgagaacgtgaagaaggtgcagtacgcg 123 Query: 144 gtgcgcggcgagctctacctccgcgcatccgagctccagaaggagggcaagaggatcatc 203 ||||| || ||||| ||||| ||||| ||||||||||||||||||||||||| ||||||| Sbjct: 124 gtgcggggggagctgtacctgcgcgcctccgagctccagaaggagggcaagaagatcatc 183 Query: 204 ttcaccaacgtcggcaacccgcacgccctcggacagaagccactcaccttcccacgccag 263 |||||||||||||||||||| ||||| ||||| |||||||| ||||||||||| |||||| Sbjct: 184 ttcaccaacgtcggcaacccacacgcgctcggccagaagccgctcaccttcccccgccag 243 Query: 264 gtggtggcgctctgccaggctcccttcctcctcgatgatcccaacgtcggtctcatcttc 323 || |||||||| |||||||| |||||||| |||||||||||||||||||| || |||||| Sbjct: 244 gttgtggcgctgtgccaggcccccttcctgctcgatgatcccaacgtcggccttatcttc 303 Query: 324 cccgccgatgccatcgcaagggccaagcactacctctccctcgcacccggcggcttaggt 383 |||||||| |||||||| ||||||||||||||||| || | |||||||| || ||||| Sbjct: 304 cccgccgacgccatcgcgcgggccaagcactacctcgccatggcacccggtggactaggt 363 Query: 384 gcgtacagtgactcccgaggtatccctggggtcaggaaggaagttgccgagttcattcag 443 || |||||||| ||||||||||||||||| | ||||||||||| ||||||||||| || Sbjct: 364 gcttacagtgattcccgaggtatccctggtattaggaaggaagtcgccgagttcatcgag 423 Query: 444 aggcgtgatgggtatccgagtgatccagagcttatttacctc 485 ||||||||||| ||||| ||||||||||| |||||||||||| Sbjct: 424 aggcgtgatggttatccaagtgatccagaacttatttacctc 465
>dbj|AK067732.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013118J02, full insert sequence Length = 1970 Score = 472 bits (238), Expect = e-130 Identities = 361/402 (89%) Strand = Plus / Plus Query: 84 gggaggaaggcgctggactacgaggagctcaacgagaacgtcaagaaggtgcagtacgcc 143 ||||||||| ||||||||||||||||||| ||||||||||| ||||||||||||||||| Sbjct: 113 gggaggaagccgctggactacgaggagctgaacgagaacgtgaagaaggtgcagtacgcg 172 Query: 144 gtgcgcggcgagctctacctccgcgcatccgagctccagaaggagggcaagaggatcatc 203 ||||| || ||||| ||||| ||||| ||||||||||||||||||||||||| ||||||| Sbjct: 173 gtgcggggggagctgtacctgcgcgcctccgagctccagaaggagggcaagaagatcatc 232 Query: 204 ttcaccaacgtcggcaacccgcacgccctcggacagaagccactcaccttcccacgccag 263 |||||||||||||||||||| ||||| ||||| |||||||| ||||||||||| |||||| Sbjct: 233 ttcaccaacgtcggcaacccacacgcgctcggccagaagccgctcaccttcccccgccag 292 Query: 264 gtggtggcgctctgccaggctcccttcctcctcgatgatcccaacgtcggtctcatcttc 323 || |||||||| |||||||| |||||||| |||||||||||||||||||| || |||||| Sbjct: 293 gttgtggcgctgtgccaggcccccttcctgctcgatgatcccaacgtcggccttatcttc 352 Query: 324 cccgccgatgccatcgcaagggccaagcactacctctccctcgcacccggcggcttaggt 383 |||||||| |||||||| ||||||||||||||||| || | |||||||| || ||||| Sbjct: 353 cccgccgacgccatcgcgcgggccaagcactacctcgccatggcacccggtggactaggt 412 Query: 384 gcgtacagtgactcccgaggtatccctggggtcaggaaggaagttgccgagttcattcag 443 || |||||||| ||||||||||||||||| | ||||||||||| ||||||||||| || Sbjct: 413 gcttacagtgattcccgaggtatccctggtattaggaaggaagtcgccgagttcatcgag 472 Query: 444 aggcgtgatgggtatccgagtgatccagagcttatttacctc 485 ||||||||||| ||||| ||||||||||| |||||||||||| Sbjct: 473 aggcgtgatggttatccaagtgatccagaacttatttacctc 514
>dbj|AK060835.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-C09, full insert sequence Length = 1581 Score = 315 bits (159), Expect = 7e-83 Identities = 252/283 (89%) Strand = Plus / Plus Query: 203 cttcaccaacgtcggcaacccgcacgccctcggacagaagccactcaccttcccacgcca 262 ||||||||||||||||||||| ||||| ||||| |||||||| ||||||||||| ||||| Sbjct: 1 cttcaccaacgtcggcaacccacacgcgctcggccagaagccgctcaccttcccccgcca 60 Query: 263 ggtggtggcgctctgccaggctcccttcctcctcgatgatcccaacgtcggtctcatctt 322 ||| |||||||| |||||||| |||||||| |||||||||||||||||||| || ||||| Sbjct: 61 ggttgtggcgctgtgccaggcccccttcctgctcgatgatcccaacgtcggccttatctt 120 Query: 323 ccccgccgatgccatcgcaagggccaagcactacctctccctcgcacccggcggcttagg 382 ||||||||| |||||||| ||||||||||||||||| || | |||||||| || |||| Sbjct: 121 ccccgccgacgccatcgcgcgggccaagcactacctcgccatggcacccggtggactagg 180 Query: 383 tgcgtacagtgactcccgaggtatccctggggtcaggaaggaagttgccgagttcattca 442 ||| |||||||| ||||||||||||||||| | ||||||||||| ||||||||||| | Sbjct: 181 tgcttacagtgattcccgaggtatccctggtattaggaaggaagtcgccgagttcatcga 240 Query: 443 gaggcgtgatgggtatccgagtgatccagagcttatttacctc 485 |||||||||||| ||||| ||||||||||| |||||||||||| Sbjct: 241 gaggcgtgatggttatccaagtgatccagaacttatttacctc 283
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 242 bits (122), Expect = 9e-61 Identities = 167/182 (91%) Strand = Plus / Minus Query: 84 gggaggaaggcgctggactacgaggagctcaacgagaacgtcaagaaggtgcagtacgcc 143 ||||||||| ||||||||||||||||||| ||||||||||| ||||||||||||||||| Sbjct: 450138 gggaggaagccgctggactacgaggagctgaacgagaacgtgaagaaggtgcagtacgcg 450079 Query: 144 gtgcgcggcgagctctacctccgcgcatccgagctccagaaggagggcaagaggatcatc 203 ||||| || ||||| ||||| ||||| ||||||||||||||||||||||||| ||||||| Sbjct: 450078 gtgcggggggagctgtacctgcgcgcctccgagctccagaaggagggcaagaagatcatc 450019 Query: 204 ttcaccaacgtcggcaacccgcacgccctcggacagaagccactcaccttcccacgccag 263 |||||||||||||||||||| ||||| ||||| |||||||| ||||||||||| |||||| Sbjct: 450018 ttcaccaacgtcggcaacccacacgcgctcggccagaagccgctcaccttcccccgccag 449959 Query: 264 gt 265 || Sbjct: 449958 gt 449957 Score = 129 bits (65), Expect = 9e-27 Identities = 101/113 (89%) Strand = Plus / Minus Query: 261 caggtggtggcgctctgccaggctcccttcctcctcgatgatcccaacgtcggtctcatc 320 ||||| |||||||| |||||||| |||||||| |||||||||||||||||||| || ||| Sbjct: 449877 caggttgtggcgctgtgccaggcccccttcctgctcgatgatcccaacgtcggccttatc 449818 Query: 321 ttccccgccgatgccatcgcaagggccaagcactacctctccctcgcacccgg 373 ||||||||||| |||||||| ||||||||||||||||| || | |||||||| Sbjct: 449817 ttccccgccgacgccatcgcgcgggccaagcactacctcgccatggcacccgg 449765 Score = 89.7 bits (45), Expect = 8e-15 Identities = 72/81 (88%) Strand = Plus / Minus Query: 380 aggtgcgtacagtgactcccgaggtatccctggggtcaggaaggaagttgccgagttcat 439 |||||| |||||||| ||||||||||||||||| | ||||||||||| ||||||||||| Sbjct: 449575 aggtgcttacagtgattcccgaggtatccctggtattaggaaggaagtcgccgagttcat 449516 Query: 440 tcagaggcgtgatgggtatcc 460 ||||||||||||| ||||| Sbjct: 449515 cgagaggcgtgatggttatcc 449495 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 462 agtgatccagagcttatttacctc 485 ||||||||||| |||||||||||| Sbjct: 449386 agtgatccagaacttatttacctc 449363
>dbj|AP004342.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0585H11 Length = 149371 Score = 242 bits (122), Expect = 9e-61 Identities = 167/182 (91%) Strand = Plus / Minus Query: 84 gggaggaaggcgctggactacgaggagctcaacgagaacgtcaagaaggtgcagtacgcc 143 ||||||||| ||||||||||||||||||| ||||||||||| ||||||||||||||||| Sbjct: 52302 gggaggaagccgctggactacgaggagctgaacgagaacgtgaagaaggtgcagtacgcg 52243 Query: 144 gtgcgcggcgagctctacctccgcgcatccgagctccagaaggagggcaagaggatcatc 203 ||||| || ||||| ||||| ||||| ||||||||||||||||||||||||| ||||||| Sbjct: 52242 gtgcggggggagctgtacctgcgcgcctccgagctccagaaggagggcaagaagatcatc 52183 Query: 204 ttcaccaacgtcggcaacccgcacgccctcggacagaagccactcaccttcccacgccag 263 |||||||||||||||||||| ||||| ||||| |||||||| ||||||||||| |||||| Sbjct: 52182 ttcaccaacgtcggcaacccacacgcgctcggccagaagccgctcaccttcccccgccag 52123 Query: 264 gt 265 || Sbjct: 52122 gt 52121 Score = 129 bits (65), Expect = 9e-27 Identities = 101/113 (89%) Strand = Plus / Minus Query: 261 caggtggtggcgctctgccaggctcccttcctcctcgatgatcccaacgtcggtctcatc 320 ||||| |||||||| |||||||| |||||||| |||||||||||||||||||| || ||| Sbjct: 52041 caggttgtggcgctgtgccaggcccccttcctgctcgatgatcccaacgtcggccttatc 51982 Query: 321 ttccccgccgatgccatcgcaagggccaagcactacctctccctcgcacccgg 373 ||||||||||| |||||||| ||||||||||||||||| || | |||||||| Sbjct: 51981 ttccccgccgacgccatcgcgcgggccaagcactacctcgccatggcacccgg 51929 Score = 89.7 bits (45), Expect = 8e-15 Identities = 72/81 (88%) Strand = Plus / Minus Query: 380 aggtgcgtacagtgactcccgaggtatccctggggtcaggaaggaagttgccgagttcat 439 |||||| |||||||| ||||||||||||||||| | ||||||||||| ||||||||||| Sbjct: 51739 aggtgcttacagtgattcccgaggtatccctggtattaggaaggaagtcgccgagttcat 51680 Query: 440 tcagaggcgtgatgggtatcc 460 ||||||||||||| ||||| Sbjct: 51679 cgagaggcgtgatggttatcc 51659 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 462 agtgatccagagcttatttacctc 485 ||||||||||| |||||||||||| Sbjct: 51550 agtgatccagaacttatttacctc 51527
>dbj|AP003759.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1567_G09 Length = 121388 Score = 242 bits (122), Expect = 9e-61 Identities = 167/182 (91%) Strand = Plus / Minus Query: 84 gggaggaaggcgctggactacgaggagctcaacgagaacgtcaagaaggtgcagtacgcc 143 ||||||||| ||||||||||||||||||| ||||||||||| ||||||||||||||||| Sbjct: 4050 gggaggaagccgctggactacgaggagctgaacgagaacgtgaagaaggtgcagtacgcg 3991 Query: 144 gtgcgcggcgagctctacctccgcgcatccgagctccagaaggagggcaagaggatcatc 203 ||||| || ||||| ||||| ||||| ||||||||||||||||||||||||| ||||||| Sbjct: 3990 gtgcggggggagctgtacctgcgcgcctccgagctccagaaggagggcaagaagatcatc 3931 Query: 204 ttcaccaacgtcggcaacccgcacgccctcggacagaagccactcaccttcccacgccag 263 |||||||||||||||||||| ||||| ||||| |||||||| ||||||||||| |||||| Sbjct: 3930 ttcaccaacgtcggcaacccacacgcgctcggccagaagccgctcaccttcccccgccag 3871 Query: 264 gt 265 || Sbjct: 3870 gt 3869 Score = 129 bits (65), Expect = 9e-27 Identities = 101/113 (89%) Strand = Plus / Minus Query: 261 caggtggtggcgctctgccaggctcccttcctcctcgatgatcccaacgtcggtctcatc 320 ||||| |||||||| |||||||| |||||||| |||||||||||||||||||| || ||| Sbjct: 3789 caggttgtggcgctgtgccaggcccccttcctgctcgatgatcccaacgtcggccttatc 3730 Query: 321 ttccccgccgatgccatcgcaagggccaagcactacctctccctcgcacccgg 373 ||||||||||| |||||||| ||||||||||||||||| || | |||||||| Sbjct: 3729 ttccccgccgacgccatcgcgcgggccaagcactacctcgccatggcacccgg 3677 Score = 89.7 bits (45), Expect = 8e-15 Identities = 72/81 (88%) Strand = Plus / Minus Query: 380 aggtgcgtacagtgactcccgaggtatccctggggtcaggaaggaagttgccgagttcat 439 |||||| |||||||| ||||||||||||||||| | ||||||||||| ||||||||||| Sbjct: 3487 aggtgcttacagtgattcccgaggtatccctggtattaggaaggaagtcgccgagttcat 3428 Query: 440 tcagaggcgtgatgggtatcc 460 ||||||||||||| ||||| Sbjct: 3427 cgagaggcgtgatggttatcc 3407 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 462 agtgatccagagcttatttacctc 485 ||||||||||| |||||||||||| Sbjct: 3298 agtgatccagaacttatttacctc 3275
>gb|DQ118094.1| Vitis labrusca AlaT1 mRNA, complete cds Length = 1434 Score = 99.6 bits (50), Expect = 8e-18 Identities = 239/302 (79%) Strand = Plus / Plus Query: 174 gagctccagaaggagggcaagaggatcatcttcaccaacgtcggcaacccgcacgccctc 233 ||||| |||||||| || || | ||| || ||||| ||||| |||||||| || || || Sbjct: 94 gagcttcagaaggaagggaaaaagattattttcacaaacgtgggcaaccctcatgctcta 153 Query: 234 ggacagaagccactcaccttcccacgccaggtggtggcgctctgccaggctcccttcctc 293 |||||||||||||| || || || ||||||||||| || || ||||| ||||| || || Sbjct: 154 ggacagaagccactgacttttcctcgccaggtggttgctctatgccaagctccatttcta 213 Query: 294 ctcgatgatcccaacgtcggtctcatcttccccgccgatgccatcgcaagggccaagcac 353 | |||||||| || || || ||| | ||||| || ||||| || ||||| || || ||| Sbjct: 214 ttagatgatcctaatgtaggactcgtattcccagcagatgcaattgcaagagctaaacac 273 Query: 354 tacctctccctcgcacccggcggcttaggtgcgtacagtgactcccgaggtatccctggg 413 ||||| || | | | || || ||||||| || |||||||| |||||| | ||||| Sbjct: 274 tacctttcattgactacgggtggtctaggtgcttatagtgactctcgaggtcttcctgga 333 Query: 414 gtcaggaaggaagttgccgagttcattcagaggcgtgatgggtatccgagtgatccagag 473 | ||||||||||| || ||||||||| |||||||||||||||||| |||||||||||| Sbjct: 334 ataaggaaggaagtggcagagttcattgggaggcgtgatgggtatccaagtgatccagag 393 Query: 474 ct 475 || Sbjct: 394 ct 395
>gb|DQ118095.1| Vitis vinifera AlaT1 mRNA, complete cds Length = 1455 Score = 91.7 bits (46), Expect = 2e-15 Identities = 238/302 (78%) Strand = Plus / Plus Query: 174 gagctccagaaggagggcaagaggatcatcttcaccaacgtcggcaacccgcacgccctc 233 ||||| |||||||| || || | ||| || ||||| ||||| |||||||| || || || Sbjct: 94 gagcttcagaaggaagggaaaaagattattttcacaaacgtgggcaaccctcatgctcta 153 Query: 234 ggacagaagccactcaccttcccacgccaggtggtggcgctctgccaggctcccttcctc 293 |||||||| ||||| || || || ||||||||||| || || ||||| ||||| || || Sbjct: 154 ggacagaaaccactgacttttcctcgccaggtggttgctctatgccaagctccatttcta 213 Query: 294 ctcgatgatcccaacgtcggtctcatcttccccgccgatgccatcgcaagggccaagcac 353 | |||||||| || || || ||| | ||||| || ||||| || ||||| || || ||| Sbjct: 214 ttagatgatcctaatgtaggactcgtattcccagcagatgcaattgcaagagctaaacac 273 Query: 354 tacctctccctcgcacccggcggcttaggtgcgtacagtgactcccgaggtatccctggg 413 ||||| || | | | || || ||||||| || |||||||| |||||| | ||||| Sbjct: 274 tacctttcattgacttcgggtggtctaggtgcttatagtgactctcgaggtcttcctgga 333 Query: 414 gtcaggaaggaagttgccgagttcattcagaggcgtgatgggtatccgagtgatccagag 473 | ||||||||||| || ||||||||| |||||||||||||||||| |||||||||||| Sbjct: 334 ataaggaaggaagtggcagagttcattgggaggcgtgatgggtatccaagtgatccagag 393 Query: 474 ct 475 || Sbjct: 394 ct 395
>gb|DQ226853.1| Boechera divaricarpa isolate SLW-C-D09 mRNA sequence Length = 646 Score = 73.8 bits (37), Expect = 5e-10 Identities = 85/101 (84%) Strand = Plus / Plus Query: 372 ggcggcttaggtgcgtacagtgactcccgaggtatccctggggtcaggaaggaagttgcc 431 ||||| |||||||| ||||||||||| |||| || || || || ||||| || ||||| Sbjct: 407 ggcggtttaggtgcttacagtgactcaagaggcattccaggagttaggaaagaggttgct 466 Query: 432 gagttcattcagaggcgtgatgggtatccgagtgatccaga 472 ||||||||||| |||||||||||||||| ||||| ||||| Sbjct: 467 gagttcattcaacggcgtgatgggtatccaagtgacccaga 507
>gb|AY109741.1| Zea mays CL1839_2 mRNA sequence Length = 1303 Score = 73.8 bits (37), Expect = 5e-10 Identities = 74/85 (87%), Gaps = 1/85 (1%) Strand = Plus / Minus Query: 385 cgtacagtgactcccgaggtatccctggggtcaggaaggaagttgccgagttcattcaga 444 |||||||||||||||| || ||||| || ||||||||||||||||||| ||||| || | Sbjct: 1302 cgtacagtgactcccgcgg-atcccgggaatcaggaaggaagttgccgacttcatccaca 1244 Query: 445 ggcgtgatgggtatccgagtgatcc 469 ||||||||| ||||| |||||||| Sbjct: 1243 agcgtgatggatatcccagtgatcc 1219
>ref|NM_102180.2| Arabidopsis thaliana GGT1 (ALANINE-2-OXOGLUTARATE AMINOTRANSFERASE 1) AT1G23310 (GGT1) transcript variant AT1G23310.1 mRNA, complete cds Length = 2052 Score = 58.0 bits (29), Expect = 3e-05 Identities = 83/101 (82%) Strand = Plus / Plus Query: 372 ggcggcttaggtgcgtacagtgactcccgaggtatccctggggtcaggaaggaagttgcc 431 ||||| |||||||| |||||||| || |||| | || || || ||||| || ||||| Sbjct: 594 ggcggtttaggtgcttacagtgattcaagaggccttccaggagttaggaaagaggttgct 653 Query: 432 gagttcattcagaggcgtgatgggtatccgagtgatccaga 472 ||||||||||| |||||||||||||||| ||||| ||||| Sbjct: 654 gagttcattcaacggcgtgatgggtatccaagtgacccaga 694 Score = 42.1 bits (21), Expect = 1.7 Identities = 45/53 (84%) Strand = Plus / Plus Query: 234 ggacagaagccactcaccttcccacgccaggtggtggcgctctgccaggctcc 286 |||||||||||| | || || || ||||||||||| ||||| ||||| ||||| Sbjct: 456 ggacagaagccattgacatttcctcgccaggtggttgcgctttgccaagctcc 508
>ref|NM_001036006.1| Arabidopsis thaliana GGT1 (ALANINE-2-OXOGLUTARATE AMINOTRANSFERASE 1) AT1G23310 (GGT1) transcript variant AT1G23310.2 mRNA, complete cds Length = 2066 Score = 58.0 bits (29), Expect = 3e-05 Identities = 83/101 (82%) Strand = Plus / Plus Query: 372 ggcggcttaggtgcgtacagtgactcccgaggtatccctggggtcaggaaggaagttgcc 431 ||||| |||||||| |||||||| || |||| | || || || ||||| || ||||| Sbjct: 628 ggcggtttaggtgcttacagtgattcaagaggccttccaggagttaggaaagaggttgct 687 Query: 432 gagttcattcagaggcgtgatgggtatccgagtgatccaga 472 ||||||||||| |||||||||||||||| ||||| ||||| Sbjct: 688 gagttcattcaacggcgtgatgggtatccaagtgacccaga 728 Score = 42.1 bits (21), Expect = 1.7 Identities = 45/53 (84%) Strand = Plus / Plus Query: 234 ggacagaagccactcaccttcccacgccaggtggtggcgctctgccaggctcc 286 |||||||||||| | || || || ||||||||||| ||||| ||||| ||||| Sbjct: 490 ggacagaagccattgacatttcctcgccaggtggttgcgctttgccaagctcc 542
>gb|AY150373.1| Arabidopsis thaliana putative alanine aminotransferase (At1g23310) mRNA, complete cds Length = 1477 Score = 58.0 bits (29), Expect = 3e-05 Identities = 83/101 (82%) Strand = Plus / Plus Query: 372 ggcggcttaggtgcgtacagtgactcccgaggtatccctggggtcaggaaggaagttgcc 431 ||||| |||||||| |||||||| || |||| | || || || ||||| || ||||| Sbjct: 292 ggcggtttaggtgcttacagtgattcaagaggccttccaggagttaggaaagaggttgct 351 Query: 432 gagttcattcagaggcgtgatgggtatccgagtgatccaga 472 ||||||||||| |||||||||||||||| ||||| ||||| Sbjct: 352 gagttcattcaacggcgtgatgggtatccaagtgacccaga 392 Score = 42.1 bits (21), Expect = 1.7 Identities = 45/53 (84%) Strand = Plus / Plus Query: 234 ggacagaagccactcaccttcccacgccaggtggtggcgctctgccaggctcc 286 |||||||||||| | || || || ||||||||||| ||||| ||||| ||||| Sbjct: 154 ggacagaagccattgacatttcctcgccaggtggttgcgctttgccaagctcc 206
>gb|AF360195.1| Arabidopsis thaliana putative alanine aminotransferase (At1g23310) mRNA, complete cds Length = 1768 Score = 58.0 bits (29), Expect = 3e-05 Identities = 83/101 (82%) Strand = Plus / Plus Query: 372 ggcggcttaggtgcgtacagtgactcccgaggtatccctggggtcaggaaggaagttgcc 431 ||||| |||||||| |||||||| || |||| | || || || ||||| || ||||| Sbjct: 416 ggcggtttaggtgcttacagtgattcaagaggccttccaggagttaggaaagaggttgct 475 Query: 432 gagttcattcagaggcgtgatgggtatccgagtgatccaga 472 ||||||||||| |||||||||||||||| ||||| ||||| Sbjct: 476 gagttcattcaacggcgtgatgggtatccaagtgacccaga 516 Score = 42.1 bits (21), Expect = 1.7 Identities = 45/53 (84%) Strand = Plus / Plus Query: 234 ggacagaagccactcaccttcccacgccaggtggtggcgctctgccaggctcc 286 |||||||||||| | || || || ||||||||||| ||||| ||||| ||||| Sbjct: 278 ggacagaagccattgacatttcctcgccaggtggttgcgctttgccaagctcc 330
>gb|AY056379.1| Arabidopsis thaliana At1g23310/F26F24_4 mRNA, complete cds Length = 1647 Score = 58.0 bits (29), Expect = 3e-05 Identities = 83/101 (82%) Strand = Plus / Plus Query: 372 ggcggcttaggtgcgtacagtgactcccgaggtatccctggggtcaggaaggaagttgcc 431 ||||| |||||||| |||||||| || |||| | || || || ||||| || ||||| Sbjct: 398 ggcggtttaggtgcttacagtgattcaagaggccttccaggagttaggaaagaggttgct 457 Query: 432 gagttcattcagaggcgtgatgggtatccgagtgatccaga 472 ||||||||||| |||||||||||||||| ||||| ||||| Sbjct: 458 gagttcattcaacggcgtgatgggtatccaagtgacccaga 498 Score = 42.1 bits (21), Expect = 1.7 Identities = 45/53 (84%) Strand = Plus / Plus Query: 234 ggacagaagccactcaccttcccacgccaggtggtggcgctctgccaggctcc 286 |||||||||||| | || || || ||||||||||| ||||| ||||| ||||| Sbjct: 260 ggacagaagccattgacatttcctcgccaggtggttgcgctttgccaagctcc 312
>emb|BX814587.1|CNS0AAUD Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB82ZG03 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1707 Score = 58.0 bits (29), Expect = 3e-05 Identities = 83/101 (82%) Strand = Plus / Plus Query: 372 ggcggcttaggtgcgtacagtgactcccgaggtatccctggggtcaggaaggaagttgcc 431 ||||| |||||||| |||||||| || |||| | || || || ||||| || ||||| Sbjct: 382 ggcggtttaggtgcttacagtgattcaagaggccttccaggagttaggaaagaggttgct 441 Query: 432 gagttcattcagaggcgtgatgggtatccgagtgatccaga 472 ||||||||||| |||||||||||||||| ||||| ||||| Sbjct: 442 gagttcattcaacggcgtgatgggtatccaagtgacccaga 482 Score = 42.1 bits (21), Expect = 1.7 Identities = 45/53 (84%) Strand = Plus / Plus Query: 234 ggacagaagccactcaccttcccacgccaggtggtggcgctctgccaggctcc 286 |||||||||||| | || || || ||||||||||| ||||| ||||| ||||| Sbjct: 244 ggacagaagccattgacatttcctcgccaggtggttgcgctttgccaagctcc 296
>gb|AF479639.1| Arabidopsis thaliana glutamate:glyoxylate aminotransferase 1 (GGT1) mRNA, complete cds Length = 1714 Score = 58.0 bits (29), Expect = 3e-05 Identities = 83/101 (82%) Strand = Plus / Plus Query: 372 ggcggcttaggtgcgtacagtgactcccgaggtatccctggggtcaggaaggaagttgcc 431 ||||| |||||||| |||||||| || |||| | || || || ||||| || ||||| Sbjct: 439 ggcggtttaggtgcttacagtgattcaagaggccttccaggagttaggaaagaggttgct 498 Query: 432 gagttcattcagaggcgtgatgggtatccgagtgatccaga 472 ||||||||||| |||||||||||||||| ||||| ||||| Sbjct: 499 gagttcattcaacggcgtgatgggtatccaagtgacccaga 539 Score = 42.1 bits (21), Expect = 1.7 Identities = 45/53 (84%) Strand = Plus / Plus Query: 234 ggacagaagccactcaccttcccacgccaggtggtggcgctctgccaggctcc 286 |||||||||||| | || || || ||||||||||| ||||| ||||| ||||| Sbjct: 301 ggacagaagccattgacatttcctcgccaggtggttgcgctttgccaagctcc 353
>gb|AY042902.1| Arabidopsis thaliana alanine aminotransferase-like protein (F26F24.16) mRNA, partial cds Length = 1328 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 417 aggaaggaagttgccgagttcattcagaggcgtgatgggtatccgagtgatccaga 472 ||||| || ||||| ||||||||||| |||||||||||||||| ||||| ||||| Sbjct: 32 aggaaagaggttgctgagttcattcaacggcgtgatgggtatccaagtgacccaga 87
>gb|U31975.1|CRU31975 Chlamydomonas reinhardtii alanine aminotransferase mRNA, complete cds Length = 2534 Score = 54.0 bits (27), Expect = 4e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 183 aaggagggcaagaggatcatcttcaccaacgtcggcaacccgcacgc 229 |||||||||||| |||||| ||||| |||||||| ||||||||||| Sbjct: 313 aaggagggcaaggagatcattttcacaaacgtcggaaacccgcacgc 359
>dbj|AP004918.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT13I21, TM0076a, complete sequence Length = 71794 Score = 52.0 bits (26), Expect = 0.002 Identities = 68/82 (82%) Strand = Plus / Minus Query: 379 taggtgcgtacagtgactcccgaggtatccctggggtcaggaaggaagttgccgagttca 438 ||||||| || |||||||||||||| | || || || ||| ||||||| || ||||||| Sbjct: 35227 taggtgcttatagtgactcccgaggccttccaggagtgaggcaggaagtggcagagttca 35168 Query: 439 ttcagaggcgtgatgggtatcc 460 | || ||||||||||| ||||| Sbjct: 35167 tacaaaggcgtgatggttatcc 35146
>gb|AY058868.1| Arabidopsis thaliana At1g23310/F26F24_4 mRNA, complete cds Length = 1762 Score = 50.1 bits (25), Expect = 0.007 Identities = 73/89 (82%) Strand = Plus / Plus Query: 372 ggcggcttaggtgcgtacagtgactcccgaggtatccctggggtcaggaaggaagttgcc 431 ||||| |||||||| |||||||| || |||| | || || || ||||| || ||||| Sbjct: 398 ggcggtttaggtgcttacagtgattcaagaggccttccaggagttaggaaagaggttgct 457 Query: 432 gagttcattcagaggcgtgatgggtatcc 460 ||||||||||| |||||||||||||||| Sbjct: 458 gagttcattcaacggcgtgatgggtatcc 486 Score = 42.1 bits (21), Expect = 1.7 Identities = 45/53 (84%) Strand = Plus / Plus Query: 234 ggacagaagccactcaccttcccacgccaggtggtggcgctctgccaggctcc 286 |||||||||||| | || || || ||||||||||| ||||| ||||| ||||| Sbjct: 260 ggacagaagccattgacatttcctcgccaggtggttgcgctttgccaagctcc 312
>gb|BT002643.1| Arabidopsis thaliana At1g23310/F26F24_4 gene, complete cds Length = 1446 Score = 50.1 bits (25), Expect = 0.007 Identities = 73/89 (82%) Strand = Plus / Plus Query: 372 ggcggcttaggtgcgtacagtgactcccgaggtatccctggggtcaggaaggaagttgcc 431 ||||| |||||||| |||||||| || |||| | || || || ||||| || ||||| Sbjct: 292 ggcggtttaggtgcttacagtgattcaagaggccttccaggagttaggaaagaggttgct 351 Query: 432 gagttcattcagaggcgtgatgggtatcc 460 ||||||||||| |||||||||||||||| Sbjct: 352 gagttcattcaacggcgtgatgggtatcc 380 Score = 42.1 bits (21), Expect = 1.7 Identities = 45/53 (84%) Strand = Plus / Plus Query: 234 ggacagaagccactcaccttcccacgccaggtggtggcgctctgccaggctcc 286 |||||||||||| | || || || ||||||||||| ||||| ||||| ||||| Sbjct: 154 ggacagaagccattgacatttcctcgccaggtggttgcgctttgccaagctcc 206
>gb|AC005292.4|AC005292 Genomic sequence for Arabidopsis thaliana BAC F26F24 from chromosome I, complete sequence Length = 99053 Score = 48.1 bits (24), Expect = 0.027 Identities = 39/44 (88%) Strand = Plus / Minus Query: 417 aggaaggaagttgccgagttcattcagaggcgtgatgggtatcc 460 ||||| || ||||| ||||||||||| |||||||||||||||| Sbjct: 46944 aggaaagaggttgctgagttcattcaacggcgtgatgggtatcc 46901
>ref|XM_587589.2| PREDICTED: Bos taurus similar to kyphoscoliosis peptidase (LOC510448), partial mRNA Length = 766 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Minus Query: 27 ctctgctctgcggcggcgcgccaggg 52 |||||| ||||||||||||||||||| Sbjct: 307 ctctgcgctgcggcggcgcgccaggg 282
>ref|XM_573798.1| PREDICTED: Rattus norvegicus similar to Hypothetical protein BC024118 (LOC498528), mRNA Length = 905 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 12 ccccctggggctctgctctgct 33 |||||||||||||||||||||| Sbjct: 485 ccccctggggctctgctctgct 464
>ref|XM_515293.1| PREDICTED: Pan troglodytes a disintegrin and metalloproteinase domain 17 (LOC459018), mRNA Length = 2565 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 274 tctgccaggctcccttcctcc 294 ||||||||||||||||||||| Sbjct: 1833 tctgccaggctcccttcctcc 1853
>ref|NM_145463.3| Mus musculus transmembrane protein 46 (Tmem46), mRNA Length = 3144 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 13 cccctggggctctgctctgct 33 ||||||||||||||||||||| Sbjct: 1230 cccctggggctctgctctgct 1210
>gb|AC147044.2| Mus musculus BAC clone RP23-106B19 from chromosome 14, complete sequence Length = 181146 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 13 cccctggggctctgctctgct 33 ||||||||||||||||||||| Sbjct: 1895 cccctggggctctgctctgct 1915
>gb|AC123534.3| Mus musculus BAC clone RP23-356I5 from chromosome 14, complete sequence Length = 205222 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 13 cccctggggctctgctctgct 33 ||||||||||||||||||||| Sbjct: 117062 cccctggggctctgctctgct 117082
>gb|BC057640.1| Mus musculus transmembrane protein 46, mRNA (cDNA clone MGC:67809 IMAGE:4018213), complete cds Length = 2740 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 13 cccctggggctctgctctgct 33 ||||||||||||||||||||| Sbjct: 819 cccctggggctctgctctgct 799
>gb|AC131961.1| Drosophila pseudoobscura FOSMID DPSF1-548A3 (Children's Hospital Oakland Research Institute Drosophila pseudoobscura FOSMID Library) complete sequence Length = 39990 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 17 tggggctctgctctgctctgc 37 ||||||||||||||||||||| Sbjct: 32123 tggggctctgctctgctctgc 32103
>dbj|AK087512.1| Mus musculus 0 day neonate eyeball cDNA, RIKEN full-length enriched library, clone:E130308O13 product:hypothetical protein, full insert sequence Length = 2236 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 13 cccctggggctctgctctgct 33 ||||||||||||||||||||| Sbjct: 1225 cccctggggctctgctctgct 1205
>dbj|AK034905.1| Mus musculus 12 days embryo embryonic body between diaphragm region and neck cDNA, RIKEN full-length enriched library, clone:9430059P22 product:hypothetical protein, full insert sequence Length = 3144 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 13 cccctggggctctgctctgct 33 ||||||||||||||||||||| Sbjct: 1230 cccctggggctctgctctgct 1210
>gb|AC080162.7| Homo sapiens BAC clone RP11-400L8 from 2, complete sequence Length = 171653 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 274 tctgccaggctcccttcctcc 294 ||||||||||||||||||||| Sbjct: 144125 tctgccaggctcccttcctcc 144105
>gb|BC024118.1| Mus musculus transmembrane protein 46, mRNA (cDNA clone MGC:37759 IMAGE:5068886), complete cds Length = 2603 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 13 cccctggggctctgctctgct 33 ||||||||||||||||||||| Sbjct: 691 cccctggggctctgctctgct 671
>gb|AY106411.1| Zea mays PCO106344 mRNA sequence Length = 1217 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 21 gctctgctctgctctgcggcg 41 ||||||||||||||||||||| Sbjct: 67 gctctgctctgctctgcggcg 47
>gb|AE004969.1| Neisseria gonorrhoeae FA 1090, complete genome Length = 2153922 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 209 caacgtcggcaacccgcacgccctc 233 ||||| ||||||||||||||||||| Sbjct: 788135 caacgacggcaacccgcacgccctc 788159
>gb|AC124724.4| Mus musculus BAC clone RP23-446L16 from chromosome 19, complete sequence Length = 179952 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 21 gctctgctctgctctgcggc 40 |||||||||||||||||||| Sbjct: 131321 gctctgctctgctctgcggc 131340
>ref|XM_537089.2| PREDICTED: Canis familiaris similar to collagen, type XXIV, alpha 1 (LOC479965), mRNA Length = 5145 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 2 acacccttttccccctgggg 21 |||||||||||||||||||| Sbjct: 2666 acacccttttccccctgggg 2647
>ref|XM_503184.1| Yarrowia lipolytica CLIB122, YALI0D23287g predicted mRNA Length = 4983 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 97 tggactacgaggagctcaacgaga 120 ||||| |||||||||||||||||| Sbjct: 3584 tggacgacgaggagctcaacgaga 3607
>emb|AL162591.16| Human DNA sequence from clone RP11-350G8 on chromosome 1 Contains the 3' end of the AQP10 gene for aquaporin 10, the ATP8B2 gene for ATPase, Class I, type 8B, member 2, a mitochondrial ribosomal protein S33 (MRPS33) pseudogene, a novel gene, the IL6R gene for interleukin 6 receptor, a proteasome (prosome, macropain) 26S subunit, non-ATPase, 8 (PSMD8) pseduogene, a novel gene (LOC126669), the 5' end of a novel gene (DKFZp434M202) and a CpG island, complete sequence Length = 201167 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 14 ccctggggctctgctctgctctgc 37 |||| ||||||||||||||||||| Sbjct: 180882 cccttgggctctgctctgctctgc 180859
>emb|AL591985.1|RME591985 Sinorhizobium meliloti 1021 complete pSymB Length = 1683333 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 327 gccgatgccatcgcaagggc 346 |||||||||||||||||||| Sbjct: 292803 gccgatgccatcgcaagggc 292784
>emb|BX571691.13| Zebrafish DNA sequence from clone CH211-142G20 in linkage group 7, complete sequence Length = 79440 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 185 ggagggcaagaggatcatct 204 |||||||||||||||||||| Sbjct: 736 ggagggcaagaggatcatct 717
>gb|AC126783.33| Medicago truncatula clone mth2-15k17, complete sequence Length = 117437 Score = 40.1 bits (20), Expect = 6.6 Identities = 38/44 (86%) Strand = Plus / Minus Query: 417 aggaaggaagttgccgagttcattcagaggcgtgatgggtatcc 460 ||||| ||||| || ||||| || |||||||||||||| ||||| Sbjct: 80405 aggaaagaagtggcagagtttatacagaggcgtgatggttatcc 80362
>ref|XM_681871.1| PREDICTED: Danio rerio similar to Nedd4-binding protein 1 (N4BP1) (LOC558641), partial mRNA Length = 458 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 185 ggagggcaagaggatcatct 204 |||||||||||||||||||| Sbjct: 216 ggagggcaagaggatcatct 235
>gb|AC099032.1| Drosophila melanogaster, chromosome 2R, region 53F-54A, BAC clone BACR32P08, complete sequence Length = 163072 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 18 ggggctctgctctgctctgc 37 |||||||||||||||||||| Sbjct: 138034 ggggctctgctctgctctgc 138015
>gb|AC007520.8|AC007520 Drosophila melanogaster, chromosome 2R, region 53D-54A, BAC clone BACR11M15, complete sequence Length = 170994 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 18 ggggctctgctctgctctgc 37 |||||||||||||||||||| Sbjct: 62201 ggggctctgctctgctctgc 62182
>gb|AC108814.22| Mus musculus chromosome 19, clone RP23-235H21, complete sequence Length = 196556 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 21 gctctgctctgctctgcggc 40 |||||||||||||||||||| Sbjct: 25508 gctctgctctgctctgcggc 25527
>emb|AJ299420.1|CRU299420 Capsella rubella ORF1 and ORF2 DNA for hypothetical proteins Length = 5138 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 320 cttccccgccgatgccatcg 339 |||||||||||||||||||| Sbjct: 434 cttccccgccgatgccatcg 453
>emb|AJ328439.1|HSA328439 Homo sapiens genomic sequence surrounding NotI site, clone HSJ4-AD9RS Length = 715 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 371 cggcggcttaggtgcgtaca 390 |||||||||||||||||||| Sbjct: 11 cggcggcttaggtgcgtaca 30
>gb|AE003804.4| Drosophila melanogaster chromosome 2R, section 46 of 73 of the complete sequence Length = 260337 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 18 ggggctctgctctgctctgc 37 |||||||||||||||||||| Sbjct: 125326 ggggctctgctctgctctgc 125307
>gb|AC005757.1|AC005757 Homo sapiens chromosome 19, cosmid R32611, complete sequence Length = 45929 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 278 ccaggctcccttcctcctcgatga 301 ||||||||||||||||||| |||| Sbjct: 30098 ccaggctcccttcctcctccatga 30121
>emb|CR382130.1| Yarrowia lipolytica chromosome D of strain CLIB122 of Yarrowia lipolytica Length = 3633272 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 97 tggactacgaggagctcaacgaga 120 ||||| |||||||||||||||||| Sbjct: 3030212 tggacgacgaggagctcaacgaga 3030235 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,534,116 Number of Sequences: 3902068 Number of extensions: 3534116 Number of successful extensions: 80047 Number of sequences better than 10.0: 53 Number of HSP's better than 10.0 without gapping: 53 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 79850 Number of HSP's gapped (non-prelim): 196 length of query: 485 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 463 effective length of database: 17,147,199,772 effective search space: 7939153494436 effective search space used: 7939153494436 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)