ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal22f20 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK060135.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-D07, full insert sequence Length = 1060 Score = 167 bits (84), Expect = 4e-38 Identities = 194/230 (84%), Gaps = 3/230 (1%) Strand = Plus / Plus Query: 216 tgtggagtttcggtgcttggttttgcaggtgatggcctggcggcggccaagcagggccca 275 ||||||||||| ||| |||||||||||||||| || |||| | | |||||||||| Sbjct: 315 tgtggagtttcagtgtttggttttgcaggtgagagcatggcagtg---aagcagggcctt 371 Query: 276 ctggcagggaggatccctgggctgtctggccctgatcagaatggttggagaacataccgc 335 ||||| ||| ||||||||||||| |||| ||||||| | || ||||||||||||||||| Sbjct: 372 ctggctgggcggatccctgggctctctgaccctgatgaaaaaggttggagaacataccgt 431 Query: 336 aggccggacgaaaagtctggcggacacggcgtcggctggagccccatcatcccctacagc 395 ||||| ||||| ||||| || ||||| || || || |||||||| ||||| ||||||||| Sbjct: 432 aggccagacgacaagtccggtggacatggagttggatggagcccaatcattccctacagc 491 Query: 396 ttcaaagttcctgatggctgggaagagacgccggtctcgatcgctgatct 445 |||||||||| |||||||||||||||| ||||| ||||| |||||||| Sbjct: 492 ttcaaagttcgtgatggctgggaagaggtcccggtgtcgattgctgatct 541
>dbj|AK058893.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-007-E10, full insert sequence Length = 1007 Score = 133 bits (67), Expect = 5e-28 Identities = 193/234 (82%), Gaps = 7/234 (2%) Strand = Plus / Plus Query: 216 tgtggagtttcggtgcttggttttgcaggtgatggcctggcggcggccaagcagggccca 275 ||||||||||| ||| |||||||||||||||| || |||| | | |||||||||| Sbjct: 305 tgtggagtttcagtgtttggttttgcaggtgagagcatggcagtg---aagcagggcctt 361 Query: 276 ctggcagggaggatccctgggctgtctggccctgatcagaatg----gttggagaacata 331 ||||| ||| ||||||||||||| |||| ||||||| | || | ||||||||||||| Sbjct: 362 ctggctgggcggatccctgggctctctgaccctgatgaaaaagacaggttggagaacata 421 Query: 332 ccgcaggccggacgaaaagtctggcggacacggcgtcggctggagccccatcatccccta 391 || ||||| ||||| ||||| || ||||| || || || |||||||| ||||| ||||| Sbjct: 422 tcgtaggccagacgacaagtccggtggacatggagttggatggagcccaatcattcccta 481 Query: 392 cagcttcaaagttcctgatggctgggaagagacgccggtctcgatcgctgatct 445 |||||||||||||| |||||||||||||||| ||||| ||||| |||||||| Sbjct: 482 cagcttcaaagttcgtgatggctgggaagaggtcccggtgtcgattgctgatct 535
>gb|AY109944.1| Zea mays CL24591_1 mRNA sequence Length = 1069 Score = 123 bits (62), Expect = 5e-25 Identities = 137/162 (84%) Strand = Plus / Minus Query: 257 ggcggccaagcagggcccactggcagggaggatccctgggctgtctggccctgatcagaa 316 ||||||||| ||||||| || || |||||| |||| || |||||| ||||| | || Sbjct: 847 ggcggccaaccagggcctgctcgccgggagggtccccggcttgtctgaacctgacgaaaa 788 Query: 317 tggttggagaacataccgcaggccggacgaaaagtctggcggacacggcgtcggctggag 376 |||||||||||| ||||||||||| ||||| ||||| || || ||||| || |||||||| Sbjct: 787 tggttggagaacgtaccgcaggccagacgacaagtccggtggccacggagttggctggag 728 Query: 377 ccccatcatcccctacagcttcaaagttcctgatggctggga 418 |||||||||||| ||||||||||||||||| || |||||||| Sbjct: 727 ccccatcatcccgtacagcttcaaagttccagacggctggga 686
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 113 bits (57), Expect = 5e-22 Identities = 93/105 (88%) Strand = Plus / Minus Query: 318 ggttggagaacataccgcaggccggacgaaaagtctggcggacacggcgtcggctggagc 377 ||||||||||||||||| ||||| ||||| ||||| || ||||| || || || |||||| Sbjct: 4556085 ggttggagaacataccgtaggccagacgacaagtccggtggacatggagttggatggagc 4556026 Query: 378 cccatcatcccctacagcttcaaagttcctgatggctgggaagag 422 || ||||| ||||||||||||||||||| |||||||||||||||| Sbjct: 4556025 ccaatcattccctacagcttcaaagttcgtgatggctgggaagag 4555981 Score = 60.0 bits (30), Expect = 6e-06 Identities = 80/96 (83%), Gaps = 3/96 (3%) Strand = Plus / Minus Query: 216 tgtggagtttcggtgcttggttttgcaggtgatggcctggcggcggccaagcagggccca 275 ||||||||||| ||| |||||||||||||||| || |||| | | |||||||||| Sbjct: 4556742 tgtggagtttcagtgtttggttttgcaggtgagagcatggcagtg---aagcagggcctt 4556686 Query: 276 ctggcagggaggatccctgggctgtctggccctgat 311 ||||| ||| ||||||||||||| |||| ||||||| Sbjct: 4556685 ctggctgggcggatccctgggctctctgaccctgat 4556650
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 113 bits (57), Expect = 5e-22 Identities = 93/105 (88%) Strand = Plus / Minus Query: 318 ggttggagaacataccgcaggccggacgaaaagtctggcggacacggcgtcggctggagc 377 ||||||||||||||||| ||||| ||||| ||||| || ||||| || || || |||||| Sbjct: 4556066 ggttggagaacataccgtaggccagacgacaagtccggtggacatggagttggatggagc 4556007 Query: 378 cccatcatcccctacagcttcaaagttcctgatggctgggaagag 422 || ||||| ||||||||||||||||||| |||||||||||||||| Sbjct: 4556006 ccaatcattccctacagcttcaaagttcgtgatggctgggaagag 4555962 Score = 60.0 bits (30), Expect = 6e-06 Identities = 80/96 (83%), Gaps = 3/96 (3%) Strand = Plus / Minus Query: 216 tgtggagtttcggtgcttggttttgcaggtgatggcctggcggcggccaagcagggccca 275 ||||||||||| ||| |||||||||||||||| || |||| | | |||||||||| Sbjct: 4556723 tgtggagtttcagtgtttggttttgcaggtgagagcatggcagtg---aagcagggcctt 4556667 Query: 276 ctggcagggaggatccctgggctgtctggccctgat 311 ||||| ||| ||||||||||||| |||| ||||||| Sbjct: 4556666 ctggctgggcggatccctgggctctctgaccctgat 4556631
>emb|AL928749.4|CNS08CBM Oryza sativa chromosome 12, . BAC OSJNBa0002O20 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 129155 Score = 113 bits (57), Expect = 5e-22 Identities = 93/105 (88%) Strand = Plus / Plus Query: 318 ggttggagaacataccgcaggccggacgaaaagtctggcggacacggcgtcggctggagc 377 ||||||||||||||||| ||||| ||||| ||||| || ||||| || || || |||||| Sbjct: 48693 ggttggagaacataccgtaggccagacgacaagtccggtggacatggagttggatggagc 48752 Query: 378 cccatcatcccctacagcttcaaagttcctgatggctgggaagag 422 || ||||| ||||||||||||||||||| |||||||||||||||| Sbjct: 48753 ccaatcattccctacagcttcaaagttcgtgatggctgggaagag 48797 Score = 60.0 bits (30), Expect = 6e-06 Identities = 80/96 (83%), Gaps = 3/96 (3%) Strand = Plus / Plus Query: 216 tgtggagtttcggtgcttggttttgcaggtgatggcctggcggcggccaagcagggccca 275 ||||||||||| ||| |||||||||||||||| || |||| | | |||||||||| Sbjct: 48036 tgtggagtttcagtgtttggttttgcaggtgagagcatggcagtg---aagcagggcctt 48092 Query: 276 ctggcagggaggatccctgggctgtctggccctgat 311 ||||| ||| ||||||||||||| |||| ||||||| Sbjct: 48093 ctggctgggcggatccctgggctctctgaccctgat 48128
>gb|AC111115.13| Mus musculus chromosome 5, clone RP23-213H20, complete sequence Length = 201694 Score = 48.1 bits (24), Expect = 0.025 Identities = 27/28 (96%) Strand = Plus / Minus Query: 10 ccctcttcttgccgagctcctcctcctc 37 |||||||||| ||||||||||||||||| Sbjct: 4820 ccctcttcttcccgagctcctcctcctc 4793
>ref|NM_183928.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1224 Score = 48.1 bits (24), Expect = 0.025 Identities = 30/32 (93%) Strand = Plus / Minus Query: 3 agcttggccctcttcttgccgagctcctcctc 34 ||||||||||||| |||||||| ||||||||| Sbjct: 311 agcttggccctctccttgccgacctcctcctc 280
>gb|AC129553.10| Mus musculus chromosome 5, clone RP24-351J24, complete sequence Length = 152414 Score = 48.1 bits (24), Expect = 0.025 Identities = 27/28 (96%) Strand = Plus / Minus Query: 10 ccctcttcttgccgagctcctcctcctc 37 |||||||||| ||||||||||||||||| Sbjct: 120064 ccctcttcttcccgagctcctcctcctc 120037
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 48.1 bits (24), Expect = 0.025 Identities = 30/32 (93%) Strand = Plus / Minus Query: 3 agcttggccctcttcttgccgagctcctcctc 34 ||||||||||||| |||||||| ||||||||| Sbjct: 13346896 agcttggccctctccttgccgacctcctcctc 13346865 Score = 46.1 bits (23), Expect = 0.097 Identities = 29/31 (93%) Strand = Plus / Plus Query: 3 agcttggccctcttcttgccgagctcctcct 33 ||||||||||||| |||| |||||||||||| Sbjct: 39821699 agcttggccctctccttgtcgagctcctcct 39821729 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 2 cagcttggccctcttcttgccgagctcc 29 |||||||||||||| ||||| ||||||| Sbjct: 13349580 cagcttggccctctgcttgcggagctcc 13349553 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 cgagctcctcctcctcctct 41 |||||||||||||||||||| Sbjct: 2274217 cgagctcctcctcctcctct 2274236
>dbj|AP003331.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1088D01 Length = 146144 Score = 48.1 bits (24), Expect = 0.025 Identities = 30/32 (93%) Strand = Plus / Minus Query: 3 agcttggccctcttcttgccgagctcctcctc 34 ||||||||||||| |||||||| ||||||||| Sbjct: 87254 agcttggccctctccttgccgacctcctcctc 87223 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 2 cagcttggccctcttcttgccgagctcc 29 |||||||||||||| ||||| ||||||| Sbjct: 89938 cagcttggccctctgcttgcggagctcc 89911
>ref|NM_189918.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1440 Score = 46.1 bits (23), Expect = 0.097 Identities = 29/31 (93%) Strand = Plus / Minus Query: 3 agcttggccctcttcttgccgagctcctcct 33 ||||||||||||| |||| |||||||||||| Sbjct: 293 agcttggccctctccttgtcgagctcctcct 263
>dbj|AP003433.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0004D12 Length = 138136 Score = 46.1 bits (23), Expect = 0.097 Identities = 29/31 (93%) Strand = Plus / Plus Query: 3 agcttggccctcttcttgccgagctcctcct 33 ||||||||||||| |||| |||||||||||| Sbjct: 2407 agcttggccctctccttgtcgagctcctcct 2437
>dbj|AP003436.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0470A12 Length = 185095 Score = 46.1 bits (23), Expect = 0.097 Identities = 29/31 (93%) Strand = Plus / Plus Query: 3 agcttggccctcttcttgccgagctcctcct 33 ||||||||||||| |||| |||||||||||| Sbjct: 172598 agcttggccctctccttgtcgagctcctcct 172628
>gb|AC103550.13| Oryza sativa chromosome 3 BAC OSJNBa0079G12 genomic sequence, complete sequence Length = 163712 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 22 cgagctcctcctcctcctctcc 43 |||||||||||||||||||||| Sbjct: 129002 cgagctcctcctcctcctctcc 129023
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 22 cgagctcctcctcctcctctcc 43 |||||||||||||||||||||| Sbjct: 29642375 cgagctcctcctcctcctctcc 29642354
>emb|AL365445.11| Human DNA sequence from clone RP4-796B4 on chromosome 1p32.1-33 Contains a novel pseudogene (FLJ40434), the DMRTB1 gene for DMRT-like family B with proline-rich C-terminal, 1 and two CpG islands, complete sequence Length = 106438 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 19 tgccgagctcctcctcctcctc 40 |||||||||||||||||||||| Sbjct: 72686 tgccgagctcctcctcctcctc 72665
>gb|AC079623.15| Homo sapiens 3 BAC RP11-201D16 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 201451 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 130 atgaagaggaggagcagagaga 151 |||||||||||||||||||||| Sbjct: 51670 atgaagaggaggagcagagaga 51691
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 22 cgagctcctcctcctcctctcc 43 |||||||||||||||||||||| Sbjct: 29733797 cgagctcctcctcctcctctcc 29733776
>ref|XM_341826.2| PREDICTED: Rattus norvegicus sorting nexin 26 (predicted) (Snx26_predicted), mRNA Length = 3177 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Plus Query: 284 gaggatccctgggctgtctggccctg 309 ||||||||||| |||||||||||||| Sbjct: 1176 gaggatccctgagctgtctggccctg 1201
>gb|AY108915.1| Zea mays PCO116082 mRNA sequence Length = 501 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 155 ggtgatggccttggttgggagg 176 |||||||||||||||||||||| Sbjct: 266 ggtgatggccttggttgggagg 287
>ref|XM_475181.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1650 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 19 tgccgagctcctcctcctcct 39 ||||||||||||||||||||| Sbjct: 158 tgccgagctcctcctcctcct 178
>gb|AC137611.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0020H14, complete sequence Length = 185623 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 23 gagctcctcctcctcctctcc 43 ||||||||||||||||||||| Sbjct: 124268 gagctcctcctcctcctctcc 124248
>gb|AC154425.2| Mus musculus BAC clone RP24-196O13 from chromosome 16, complete sequence Length = 161700 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 26 ctcctcctcctcctctccgttcctt 50 |||||||||||||||||| |||||| Sbjct: 94692 ctcctcctcctcctctcccttcctt 94716
>gb|AC105773.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1562_H01, complete sequence Length = 88352 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 19 tgccgagctcctcctcctcct 39 ||||||||||||||||||||| Sbjct: 24221 tgccgagctcctcctcctcct 24241
>ref|XM_991821.1| PREDICTED: Mus musculus Down syndrome cell adhesion molecule-like 1 (Dscaml1), mRNA Length = 6877 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 118 tgtcagggtcacatgaagagg 138 ||||||||||||||||||||| Sbjct: 1134 tgtcagggtcacatgaagagg 1114
>ref|XM_901581.2| PREDICTED: Mus musculus Down syndrome cell adhesion molecule-like 1, transcript variant 2 (Dscaml1), mRNA Length = 1764 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 118 tgtcagggtcacatgaagagg 138 ||||||||||||||||||||| Sbjct: 1162 tgtcagggtcacatgaagagg 1142
>ref|XM_620746.3| PREDICTED: Mus musculus Down syndrome cell adhesion molecule-like 1, transcript variant 1 (Dscaml1), mRNA Length = 6885 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 118 tgtcagggtcacatgaagagg 138 ||||||||||||||||||||| Sbjct: 1134 tgtcagggtcacatgaagagg 1114
>ref|XM_001002206.1| PREDICTED: Mus musculus Down syndrome cell adhesion molecule-like 1 (Dscaml1), mRNA Length = 6880 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 118 tgtcagggtcacatgaagagg 138 ||||||||||||||||||||| Sbjct: 1134 tgtcagggtcacatgaagagg 1114
>gb|AC132084.2| Mus musculus BAC clone RP24-544J20 from chromosome 5, complete sequence Length = 119933 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 2 cagcttggccctcttcttgccgagctcct 30 ||||||| ||||||||||||| ||||||| Sbjct: 115644 cagcttgcccctcttcttgcccagctcct 115672
>ref|XM_745842.1| Aspergillus fumigatus Af293 hypothetical protein (Afu6g10470) partial mRNA Length = 1428 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 21 ccgagctcctcctcctcctct 41 ||||||||||||||||||||| Sbjct: 1343 ccgagctcctcctcctcctct 1323
>gb|AC126447.3| Mus musculus BAC clone RP23-352G19 from chromosome 5, complete sequence Length = 196904 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 2 cagcttggccctcttcttgccgagctcct 30 ||||||| ||||||||||||| ||||||| Sbjct: 18997 cagcttgcccctcttcttgcccagctcct 19025
>emb|AL358072.21| Human DNA sequence from clone RP11-188D8 on chromosome 1 Contains the 5' end of the MAN1A2 gene for mannosidase alpha class 1A member 2 and two CpG islands, complete sequence Length = 129725 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 20 gccgagctcctcctcctcctc 40 ||||||||||||||||||||| Sbjct: 8631 gccgagctcctcctcctcctc 8611
>ref|NM_001030131.1| Danio rerio similar to euchromatic histone methyltransferase 1 (bZ1O1.6), mRNA Length = 3795 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 127 cacatgaagaggaggagcagagaga 151 ||||||||||||| ||||||||||| Sbjct: 408 cacatgaagaggatgagcagagaga 432
>emb|AL670399.4| Mouse DNA sequence from clone RP23-263M10 on chromosome 11 Contains the 3' end of the Atp2a3 gene for ubiquitous Ca++ transporting ATPase, the P2rx1 and P2rx5 genes for purinergic receptor P2X ligand-gated ion channel 1 and 5, 111 novel genes, the Camkk1 gene for calcium/calmodulin-dependent protein kinase kinase 1 alpha, the Itgae gene for epithelial-associated integrin alpha E, the Gsg2 gene for germ cell-specific gene 2 protein, the gene for a novel protein similar to human tax interacting protein 1, the Ctns gene for nephropathic cystinosis protein and five CpG islands, complete sequence Length = 224037 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 26 ctcctcctcctcctctccgttcctt 50 |||||||||||||||||| |||||| Sbjct: 137912 ctcctcctcctcctctcccttcctt 137936
>gb|AC163649.3| Mus musculus BAC clone RP24-372B10 from chromosome 3, complete sequence Length = 154740 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 278 ggcagggaggatccctgggctgtctggcc 306 ||||| ||||||||||||||| ||||||| Sbjct: 113974 ggcagagaggatccctgggctctctggcc 114002
>gb|AC159893.2| Mus musculus BAC clone RP23-365N23 from chromosome 9, complete sequence Length = 196765 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 118 tgtcagggtcacatgaagagg 138 ||||||||||||||||||||| Sbjct: 18823 tgtcagggtcacatgaagagg 18843
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 252 ctggcggcggccaagcagggc 272 ||||||||||||||||||||| Sbjct: 1649893 ctggcggcggccaagcagggc 1649913
>gb|AF487347.1| Mus musculus clone cDSL-16 Down syndrome cell adhesion molecule-like protein (Dscaml1) mRNA, partial cds Length = 2811 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 118 tgtcagggtcacatgaagagg 138 ||||||||||||||||||||| Sbjct: 1026 tgtcagggtcacatgaagagg 1006
>gb|AF487345.1| Mus musculus clone cDSL-Z5 Down syndrome cell adhesion molecule-like protein (Dscaml1) mRNA, partial cds Length = 1825 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 118 tgtcagggtcacatgaagagg 138 ||||||||||||||||||||| Sbjct: 1038 tgtcagggtcacatgaagagg 1018
>dbj|AK161365.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:4930500K09 product:Down syndrome cell adhesion molecule-like 1, full insert sequence Length = 1736 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 118 tgtcagggtcacatgaagagg 138 ||||||||||||||||||||| Sbjct: 1163 tgtcagggtcacatgaagagg 1143
>dbj|AK147531.1| Mus musculus cDNA, RIKEN full-length enriched library, clone:M5C1064L17 product:Down syndrome cell adhesion molecule-like 1, full insert sequence Length = 6379 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 118 tgtcagggtcacatgaagagg 138 ||||||||||||||||||||| Sbjct: 1078 tgtcagggtcacatgaagagg 1058
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 23 gagctcctcctcctcctctcc 43 ||||||||||||||||||||| Sbjct: 21570412 gagctcctcctcctcctctcc 21570392 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 19 tgccgagctcctcctcctcct 39 ||||||||||||||||||||| Sbjct: 18718818 tgccgagctcctcctcctcct 18718838 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 24 agctcctcctcctcctctcc 43 |||||||||||||||||||| Sbjct: 27135660 agctcctcctcctcctctcc 27135641
>gb|AC141889.4| Mus musculus BAC clone RP23-434P15 from chromosome 3, complete sequence Length = 186264 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 278 ggcagggaggatccctgggctgtctggcc 306 ||||| ||||||||||||||| ||||||| Sbjct: 579 ggcagagaggatccctgggctctctggcc 607
>ref|XM_236203.3| PREDICTED: Rattus norvegicus Down syndrome cell adhesion molecule-like 1 (predicted) (Dscaml1_predicted), mRNA Length = 6892 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 118 tgtcagggtcacatgaagagg 138 ||||||||||||||||||||| Sbjct: 1136 tgtcagggtcacatgaagagg 1116
>gb|AC092591.2| Homo sapiens BAC clone RP11-46C12 from 2, complete sequence Length = 100728 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 26 ctcctcctcctcctctccgttcctt 50 |||||||||||||||||| |||||| Sbjct: 74362 ctcctcctcctcctctcccttcctt 74386
>dbj|AK106590.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-111-G04, full insert sequence Length = 1953 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 23 gagctcctcctcctcctctcc 43 ||||||||||||||||||||| Sbjct: 68 gagctcctcctcctcctctcc 88
>emb|AJ326499.1|HSA326499 Homo sapiens genomic sequence surrounding NotI site, clone NL1-GF20C Length = 638 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 20 gccgagctcctcctcctcctc 40 ||||||||||||||||||||| Sbjct: 13 gccgagctcctcctcctcctc 33
>dbj|AK101529.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033047I01, full insert sequence Length = 2235 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 19 tgccgagctcctcctcctcct 39 ||||||||||||||||||||| Sbjct: 350 tgccgagctcctcctcctcct 370
>emb|AL831768.9| Zebrafish DNA sequence from clone RP71-1O1 in linkage group 5, complete sequence Length = 149457 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 127 cacatgaagaggaggagcagagaga 151 ||||||||||||| ||||||||||| Sbjct: 21029 cacatgaagaggatgagcagagaga 21005
>emb|CT025666.5| Zebrafish DNA sequence from clone DKEY-218J1 in linkage group 5, complete sequence Length = 131912 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 127 cacatgaagaggaggagcagagaga 151 ||||||||||||| ||||||||||| Sbjct: 108734 cacatgaagaggatgagcagagaga 108710
>gb|AC174644.2| Mus musculus BAC clone RP23-432C18 from chromosome 9, complete sequence Length = 199707 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 118 tgtcagggtcacatgaagagg 138 ||||||||||||||||||||| Sbjct: 70674 tgtcagggtcacatgaagagg 70694
>gb|AC116384.9| Mus musculus chromosome 3, clone RP23-20L19, complete sequence Length = 203580 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 25 gctcctcctcctcctctccgttcc 48 ||||||||||||||||||| |||| Sbjct: 197777 gctcctcctcctcctctcctttcc 197754
>gb|AC102039.8| Mus musculus chromosome 5, clone RP23-262L7, complete sequence Length = 168142 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 135 gaggaggagcagagagaggg 154 |||||||||||||||||||| Sbjct: 29633 gaggaggagcagagagaggg 29614
>gb|AY461511.1| Hordeum vulgare Na+/H+ antiporter precursor mRNA, complete cds Length = 2559 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 20 gccgagctcctcctcctcct 39 |||||||||||||||||||| Sbjct: 208 gccgagctcctcctcctcct 189
>gb|AC167970.4| Mus musculus BAC clone RP24-471H15 from chromosome 7, complete sequence Length = 238950 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 284 gaggatccctgggctgtctggccc 307 ||||||||||| |||||||||||| Sbjct: 91511 gaggatccctgagctgtctggccc 91534
>gb|AC113538.14| Mus musculus chromosome 8, clone RP23-118F24, complete sequence Length = 206380 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 26 ctcctcctcctcctctccgttcct 49 |||||||||||||||||| ||||| Sbjct: 170318 ctcctcctcctcctctcctttcct 170341
>gb|AC152567.1| Ornithorhynchus anatinus chromosome UNK clone OABb-43A15, complete sequence Length = 119966 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 25 gctcctcctcctcctctccgttcc 48 ||||||||||||||||||| |||| Sbjct: 113923 gctcctcctcctcctctcccttcc 113900
>ref|XM_479962.1| Oryza sativa (japonica cultivar-group), mRNA Length = 291 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 26 ctcctcctcctcctctccgt 45 |||||||||||||||||||| Sbjct: 216 ctcctcctcctcctctccgt 197
>ref|NM_030665.3| Homo sapiens retinoic acid induced 1 (RAI1), mRNA Length = 7668 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 259 cggccaagcagggcccactg 278 |||||||||||||||||||| Sbjct: 5757 cggccaagcagggcccactg 5776
>gb|AC161505.4| Mus musculus chromosome 8, clone RP24-307K17, complete sequence Length = 215514 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 26 ctcctcctcctcctctccgttcct 49 |||||||||||||||||| ||||| Sbjct: 202432 ctcctcctcctcctctcctttcct 202409
>gb|AC078839.4| Oryza sativa (japonica cultivar-group) chromosome X clone OSJNBa0094J09, complete sequence Length = 168192 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 232 ttggttttgcaggtgatggc 251 |||||||||||||||||||| Sbjct: 153807 ttggttttgcaggtgatggc 153788
>gb|AC129717.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0079H23, complete sequence Length = 191765 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 24 agctcctcctcctcctctcc 43 |||||||||||||||||||| Sbjct: 10628 agctcctcctcctcctctcc 10609
>gb|AC137592.2| Oryza sativa (Japonica cultiva-group) chromosome 9 BAC clone OSJNBa0035B22, complete sequence Length = 155788 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 26 ctcctcctcctcctctccgt 45 |||||||||||||||||||| Sbjct: 148064 ctcctcctcctcctctccgt 148083
>gb|BC065166.1| Mus musculus sorting nexin 26, mRNA (cDNA clone MGC:90030 IMAGE:6836510), complete cds Length = 4425 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 284 gaggatccctgggctgtctggccc 307 ||||||||||| |||||||||||| Sbjct: 1290 gaggatccctgagctgtctggccc 1313
>gb|BC065086.1| Mus musculus sorting nexin 26, mRNA (cDNA clone MGC:86107 IMAGE:6850475), complete cds Length = 4415 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 284 gaggatccctgggctgtctggccc 307 ||||||||||| |||||||||||| Sbjct: 1292 gaggatccctgagctgtctggccc 1315
>gb|AC135925.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0560C03, complete sequence Length = 177861 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 24 agctcctcctcctcctctcc 43 |||||||||||||||||||| Sbjct: 67056 agctcctcctcctcctctcc 67037
>gb|AF434124.1| Uncultured firmicute clone S5-1-26 16S ribosomal RNA gene, partial sequence Length = 511 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 50 tacaaagcaggcccacccta 69 |||||||||||||||||||| Sbjct: 243 tacaaagcaggcccacccta 224
>gb|AC137096.10| Mus musculus chromosome 8, clone RP24-473D4, complete sequence Length = 149463 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 26 ctcctcctcctcctctccgttcct 49 |||||||||||||||||| ||||| Sbjct: 77626 ctcctcctcctcctctcctttcct 77603
>gb|AC110217.10| Mus musculus chromosome 1, clone RP24-510P18, complete sequence Length = 132882 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 26 ctcctcctcctcctctccgttcct 49 |||||||||||||||||| ||||| Sbjct: 85861 ctcctcctcctcctctcccttcct 85838
>gb|AC115860.9| Mus musculus chromosome 1, clone RP24-290C11, complete sequence Length = 240785 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 21 ccgagctcctcctcctcctc 40 |||||||||||||||||||| Sbjct: 93997 ccgagctcctcctcctcctc 93978
>gb|BC066047.1| Mus musculus sorting nexin 26, mRNA (cDNA clone MGC:90125 IMAGE:6822191), complete cds Length = 4432 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 284 gaggatccctgggctgtctggccc 307 ||||||||||| |||||||||||| Sbjct: 1268 gaggatccctgagctgtctggccc 1291
>gb|AF131216.2| Homo sapiens chromosome 8 map 8p23-p22 clone CTB-164D9, CTB-169o5, CTB-65D4, CTC-271o23, CTC-367J24, complete sequence; and clones CTC-493P15, CTB-91N18, partial sequence Length = 321261 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 276 ctggcagggaggatccctgg 295 |||||||||||||||||||| Sbjct: 225420 ctggcagggaggatccctgg 225401
>gb|AC113198.15| Mus musculus chromosome 14, clone RP23-248E15, complete sequence Length = 236220 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 24 agctcctcctcctcctctcc 43 |||||||||||||||||||| Sbjct: 163489 agctcctcctcctcctctcc 163508
>ref|XR_003161.1| PREDICTED: Mus musculus similar to MYB binding protein (P160) 1a (LOC670866), mRNA Length = 3897 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 21 ccgagctcctcctcctcctc 40 |||||||||||||||||||| Sbjct: 2391 ccgagctcctcctcctcctc 2372
>ref|XR_004954.1| PREDICTED: Mus musculus similar to MYB binding protein (P160) 1a (LOC676681), mRNA Length = 3848 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 21 ccgagctcctcctcctcctc 40 |||||||||||||||||||| Sbjct: 2388 ccgagctcctcctcctcctc 2369
>gb|AC110563.4| Mus musculus chromosome 3, clone RP23-287O4, complete sequence Length = 237878 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 25 gctcctcctcctcctctccgttcc 48 ||||||||||||||||||| |||| Sbjct: 197986 gctcctcctcctcctctcctttcc 198009
>gb|AC139296.4| Mus musculus BAC clone RP24-131C5 from chromosome 18, complete sequence Length = 165703 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 133 aagaggaggagcagagagag 152 |||||||||||||||||||| Sbjct: 90567 aagaggaggagcagagagag 90548
>gb|BC061471.1| Mus musculus sorting nexin 26, mRNA (cDNA clone MGC:67222 IMAGE:5698780), complete cds Length = 3646 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 284 gaggatccctgggctgtctggccc 307 ||||||||||| |||||||||||| Sbjct: 520 gaggatccctgagctgtctggccc 543
>gb|AC121911.3| Mus musculus BAC clone RP24-181L3 from chromosome 1, complete sequence Length = 141695 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 273 ccactggcagggaggatccc 292 |||||||||||||||||||| Sbjct: 51414 ccactggcagggaggatccc 51395
>emb|CR723028.2|CNS0GKU2 Tetraodon nigroviridis full-length cDNA Length = 1269 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 233 tggttttgcaggtgatggcc 252 |||||||||||||||||||| Sbjct: 440 tggttttgcaggtgatggcc 459
>gb|AC145968.3| Pan troglodytes BAC clone RP43-12H15 from 7, complete sequence Length = 192898 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 132 gaagaggaggagcagagaga 151 |||||||||||||||||||| Sbjct: 101159 gaagaggaggagcagagaga 101178
>gb|AC109365.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0034P08, complete sequence Length = 173088 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 24 agctcctcctcctcctctcc 43 |||||||||||||||||||| Sbjct: 10787 agctcctcctcctcctctcc 10768
>emb|CR701999.2|CNS0G4M3 Tetraodon nigroviridis full-length cDNA Length = 1326 Score = 40.1 bits (20), Expect = 6.0 Identities = 32/36 (88%) Strand = Plus / Minus Query: 11 cctcttcttgccgagctcctcctcctcctctccgtt 46 ||||||||| ||| |||||||||||||||| |||| Sbjct: 324 cctcttcttaccgtcctcctcctcctcctctgcgtt 289
>gb|AC073330.6| Homo sapiens BAC clone RP11-409J21 from 7, complete sequence Length = 155704 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 132 gaagaggaggagcagagaga 151 |||||||||||||||||||| Sbjct: 128446 gaagaggaggagcagagaga 128465
>emb|CR680823.2|CNS0FO9V Tetraodon nigroviridis full-length cDNA Length = 623 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 152 gggggtgatggccttggttgggag 175 ||||||| |||||||||||||||| Sbjct: 320 gggggtgctggccttggttgggag 343
>emb|CR679904.2|CNS0FNKC Tetraodon nigroviridis full-length cDNA Length = 570 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 152 gggggtgatggccttggttgggag 175 ||||||| |||||||||||||||| Sbjct: 259 gggggtgctggccttggttgggag 282
>emb|CR678756.2|CNS0FMOG Tetraodon nigroviridis full-length cDNA Length = 612 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 152 gggggtgatggccttggttgggag 175 ||||||| |||||||||||||||| Sbjct: 306 gggggtgctggccttggttgggag 329
>emb|CR678964.2|CNS0FMU8 Tetraodon nigroviridis full-length cDNA Length = 611 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 152 gggggtgatggccttggttgggag 175 ||||||| |||||||||||||||| Sbjct: 306 gggggtgctggccttggttgggag 329
>emb|CR676233.2|CNS0FKQT Tetraodon nigroviridis full-length cDNA Length = 692 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 152 gggggtgatggccttggttgggag 175 ||||||| |||||||||||||||| Sbjct: 381 gggggtgctggccttggttgggag 404
>emb|CR674783.2|CNS0FJMT Tetraodon nigroviridis full-length cDNA Length = 581 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 152 gggggtgatggccttggttgggag 175 ||||||| |||||||||||||||| Sbjct: 277 gggggtgctggccttggttgggag 300
>emb|CR673900.2|CNS0FIYA Tetraodon nigroviridis full-length cDNA Length = 610 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 152 gggggtgatggccttggttgggag 175 ||||||| |||||||||||||||| Sbjct: 306 gggggtgctggccttggttgggag 329
>emb|CR673629.2|CNS0FIQR Tetraodon nigroviridis full-length cDNA Length = 614 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 152 gggggtgatggccttggttgggag 175 ||||||| |||||||||||||||| Sbjct: 306 gggggtgctggccttggttgggag 329
>emb|CR669795.2|CNS0FFS9 Tetraodon nigroviridis full-length cDNA Length = 651 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 152 gggggtgatggccttggttgggag 175 ||||||| |||||||||||||||| Sbjct: 345 gggggtgctggccttggttgggag 368
>emb|CR667902.2|CNS0FEBO Tetraodon nigroviridis full-length cDNA Length = 612 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 152 gggggtgatggccttggttgggag 175 ||||||| |||||||||||||||| Sbjct: 306 gggggtgctggccttggttgggag 329
>emb|CR667707.2|CNS0FE69 Tetraodon nigroviridis full-length cDNA Length = 612 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 152 gggggtgatggccttggttgggag 175 ||||||| |||||||||||||||| Sbjct: 306 gggggtgctggccttggttgggag 329
>emb|CR664823.2|CNS0FBY5 Tetraodon nigroviridis full-length cDNA Length = 615 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 152 gggggtgatggccttggttgggag 175 ||||||| |||||||||||||||| Sbjct: 306 gggggtgctggccttggttgggag 329
>emb|CR664195.2|CNS0FBGP Tetraodon nigroviridis full-length cDNA Length = 641 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 152 gggggtgatggccttggttgggag 175 ||||||| |||||||||||||||| Sbjct: 337 gggggtgctggccttggttgggag 360
>emb|CR662959.2|CNS0FAID Tetraodon nigroviridis full-length cDNA Length = 618 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 152 gggggtgatggccttggttgggag 175 ||||||| |||||||||||||||| Sbjct: 315 gggggtgctggccttggttgggag 338
>emb|CR661596.2|CNS0F9GI Tetraodon nigroviridis full-length cDNA Length = 612 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 152 gggggtgatggccttggttgggag 175 ||||||| |||||||||||||||| Sbjct: 308 gggggtgctggccttggttgggag 331
>emb|CR661343.2|CNS0F99H Tetraodon nigroviridis full-length cDNA Length = 591 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 152 gggggtgatggccttggttgggag 175 ||||||| |||||||||||||||| Sbjct: 286 gggggtgctggccttggttgggag 309
>emb|CR659336.2|CNS0F7PQ Tetraodon nigroviridis full-length cDNA Length = 613 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 152 gggggtgatggccttggttgggag 175 ||||||| |||||||||||||||| Sbjct: 309 gggggtgctggccttggttgggag 332
>emb|CR659673.2|CNS0F7Z3 Tetraodon nigroviridis full-length cDNA Length = 625 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 152 gggggtgatggccttggttgggag 175 ||||||| |||||||||||||||| Sbjct: 321 gggggtgctggccttggttgggag 344
>emb|CR657540.2|CNS0F6BU Tetraodon nigroviridis full-length cDNA Length = 608 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 152 gggggtgatggccttggttgggag 175 ||||||| |||||||||||||||| Sbjct: 302 gggggtgctggccttggttgggag 325
>gb|AF016427.2| Caenorhabditis elegans cosmid F32D1, complete sequence Length = 39235 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 26 ctcctcctcctcctctccgt 45 |||||||||||||||||||| Sbjct: 16106 ctcctcctcctcctctccgt 16087
>gb|AC161500.4| Mus musculus chromosome 7, clone RP23-145H5, complete sequence Length = 223833 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 132 gaagaggaggagcagagagagggg 155 |||||||||||| ||||||||||| Sbjct: 149163 gaagaggaggaggagagagagggg 149186
>gb|AC103574.7| Rattus norvegicus 1 BAC CH230-205C19 (Children's Hospital Oakland Research Institute) complete sequence Length = 199047 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 26 ctcctcctcctcctctccgt 45 |||||||||||||||||||| Sbjct: 3683 ctcctcctcctcctctccgt 3702
>gb|AC109594.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0007P22, complete sequence Length = 148068 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 24 agctcctcctcctcctctcc 43 |||||||||||||||||||| Sbjct: 122305 agctcctcctcctcctctcc 122286
>emb|AL445685.18| Human DNA sequence from clone RP11-91A18 on chromosome 1 Contains the 5' end of the RAB3B gene for RAB3B member RAS oncogene family, a 40s ribosomal protein S26 (RPS26) pseudogene, the gene for endoplasmic reticulum thioredoxin superfamily member 18 kDa (TLP19), three novel genes, the 5' end of the gene for a novel protein similar to RNA polymerase B transcription factor 3 (MGC23908) and a CpG island, complete sequence Length = 142790 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 132 gaagaggaggagcagagagagggg 155 ||||||||||||||| |||||||| Sbjct: 2418 gaagaggaggagcagggagagggg 2441
>gb|AC116320.5| Mus musculus chromosome 18 clone RP23-269B16, complete sequence Length = 195630 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 133 aagaggaggagcagagagag 152 |||||||||||||||||||| Sbjct: 44492 aagaggaggagcagagagag 44473
>gb|AY172136.1| Homo sapiens retinoic acid induced 1 (RAI1) mRNA, complete cds Length = 7663 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 259 cggccaagcagggcccactg 278 |||||||||||||||||||| Sbjct: 5758 cggccaagcagggcccactg 5777
>ref|XM_783676.1| PREDICTED: Strongylocentrotus purpuratus similar to CG13076-PB, isoform B (LOC583782), mRNA Length = 1416 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 26 ctcctcctcctcctctccgt 45 |||||||||||||||||||| Sbjct: 1033 ctcctcctcctcctctccgt 1014
>gb|AY217764.1| Mus musculus TC10/CDC42 GTPase-activating protein mRNA, complete cds; alternatively spliced Length = 3918 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 284 gaggatccctgggctgtctggccc 307 ||||||||||| |||||||||||| Sbjct: 1176 gaggatccctgagctgtctggccc 1199
>gb|AC111280.7| Rattus norvegicus 13 BAC CH230-51N9 (Children's Hospital Oakland Research Institute) complete sequence Length = 216192 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 114 aacctgtcagggtcacatga 133 |||||||||||||||||||| Sbjct: 194857 aacctgtcagggtcacatga 194876
>ref|XM_782269.1| PREDICTED: Strongylocentrotus purpuratus similar to Eukaryotic translation initiation factor 4B (eIF-4B) (LOC582313), mRNA Length = 1939 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 21 ccgagctcctcctcctcctc 40 |||||||||||||||||||| Sbjct: 1816 ccgagctcctcctcctcctc 1797
>emb|AL672236.18| Mouse DNA sequence from clone RP23-206L21 on chromosome 11 Contains a ribosomal protein S6 (Rps6) pseudogene, a novel gene, the gene for a novel immunoglobulin domain containing protein and two CpG islands, complete sequence Length = 219893 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 39 tctccgttccttacaaagca 58 |||||||||||||||||||| Sbjct: 113096 tctccgttccttacaaagca 113077
>gb|AC025678.7| Homo sapiens chromosome 15, clone RP11-602M11, complete sequence Length = 189533 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 26 ctcctcctcctcctctccgt 45 |||||||||||||||||||| Sbjct: 102612 ctcctcctcctcctctccgt 102631
>emb|AL662930.29| Mouse DNA sequence from clone RP23-212B18 on chromosome 11 Contains part of the gene for a novel protein (likely ortholog to homo sapiens FLJ38335), complete sequence Length = 198148 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 135 gaggaggagcagagagaggg 154 |||||||||||||||||||| Sbjct: 112714 gaggaggagcagagagaggg 112695
>emb|AL662868.15| Mouse DNA sequence from clone RP23-144P24 on chromosome 11 Contains three novel genes, the 5' end of the Galnt9 gene for UDP-N-acetyl-alpha-D-galactosamine: polypeptide N-acetylgalactosaminyltransferase 9 and a CpG island, complete sequence Length = 198647 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 140 ggagcagagagagggggtga 159 |||||||||||||||||||| Sbjct: 143594 ggagcagagagagggggtga 143575
>emb|AL732621.11| Mouse DNA sequence from clone RP23-299D17 on chromosome 11 Contains part of the Asb3 gene for ankyrin repeat and SOCS box-containing protein 3 and a Cpg island, complete sequence Length = 94738 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 27 tcctcctcctcctctccgtt 46 |||||||||||||||||||| Sbjct: 22807 tcctcctcctcctctccgtt 22788
>emb|AL662916.8| Mouse DNA sequence from clone RP23-442C24 on chromosome 11, complete sequence Length = 25524 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 134 agaggaggagcagagagagg 153 |||||||||||||||||||| Sbjct: 13152 agaggaggagcagagagagg 13171
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 254 ggcggcggccaagcagggcc 273 |||||||||||||||||||| Sbjct: 3067000 ggcggcggccaagcagggcc 3067019
>gb|DP000058.1| Felis catus target 117 genomic scaffold Length = 458092 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 137 ggaggagcagagagaggggg 156 |||||||||||||||||||| Sbjct: 265191 ggaggagcagagagaggggg 265210
>gb|AC098685.7| Mus musculus clone ct7-393l21, complete sequence Length = 73632 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 133 aagaggaggagcagagagaggggg 156 ||||||||||| |||||||||||| Sbjct: 21254 aagaggaggaggagagagaggggg 21231
>gb|AC026702.6| Homo sapiens chromosome 5 clone CTC-575I10, complete sequence Length = 148737 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 28 cctcctcctcctctccgttcctta 51 |||| ||||||||||||||||||| Sbjct: 61506 cctcttcctcctctccgttcctta 61483
>dbj|AK142180.1| Mus musculus 13 days embryo heart cDNA, RIKEN full-length enriched library, clone:D330006E09 product:sorting nexin 26, full insert sequence Length = 4338 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 284 gaggatccctgggctgtctggccc 307 ||||||||||| |||||||||||| Sbjct: 1234 gaggatccctgagctgtctggccc 1257
>ref|XM_680569.1| PREDICTED: Danio rerio similar to LOC407696 protein (LOC557489), partial mRNA Length = 600 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 23 gagctcctcctcctcctctccgttcctt 50 |||||||| |||||||||||| |||||| Sbjct: 490 gagctcctgctcctcctctcctttcctt 463
>gb|AC153137.4| Mus musculus BAC clone RP23-471J16 from chromosome 1, complete sequence Length = 201668 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 273 ccactggcagggaggatccc 292 |||||||||||||||||||| Sbjct: 127409 ccactggcagggaggatccc 127390
>gb|AC161252.2| Mus musculus BAC clone RP24-167E3 from chromosome 13, complete sequence Length = 158432 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 17 cttgccgagctcctcctcctcctc 40 ||||| |||||||||||||||||| Sbjct: 99986 cttgctgagctcctcctcctcctc 99963
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 24 agctcctcctcctcctctcc 43 |||||||||||||||||||| Sbjct: 22330511 agctcctcctcctcctctcc 22330530
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 232 ttggttttgcaggtgatggc 251 |||||||||||||||||||| Sbjct: 12354651 ttggttttgcaggtgatggc 12354632
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 26 ctcctcctcctcctctccgt 45 |||||||||||||||||||| Sbjct: 21942630 ctcctcctcctcctctccgt 21942649 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 26 ctcctcctcctcctctccgt 45 |||||||||||||||||||| Sbjct: 15036171 ctcctcctcctcctctccgt 15036190
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 26 ctcctcctcctcctctccgt 45 |||||||||||||||||||| Sbjct: 1948848 ctcctcctcctcctctccgt 1948829
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 104 cagtgggccaaacctgtcag 123 |||||||||||||||||||| Sbjct: 26947713 cagtgggccaaacctgtcag 26947732 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 25 gctcctcctcctcctctccg 44 |||||||||||||||||||| Sbjct: 3110548 gctcctcctcctcctctccg 3110567
>gb|AF312033.1|AF312033 Mus musculus acetylcholinesterase (Ache) and D5Ertd655e genes, complete cds; ASR2 (Asr2) gene, complete cds, alternatively spliced; TRIP6 (Trip6), CIP1 (Cip1), EPHB4 (Ephb4), ZAN (Zan), EPO (Epo), RPP20 (Rpp20), PERQ1 (Perq1), GNB2 (Gnb2), and BAF53B (Baf53b) genes, complete cds; and TFR2 (Tfr2) gene, partial cds Length = 296820 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 129 catgaagaggaggagcagag 148 |||||||||||||||||||| Sbjct: 208754 catgaagaggaggagcagag 208773
>gb|DQ060518.1| Homo sapiens nitric oxide synthase 2A (inducible, hepatocytes) (NOS2A) gene, complete cds Length = 47758 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 134 agaggaggagcagagagagg 153 |||||||||||||||||||| Sbjct: 3929 agaggaggagcagagagagg 3910
>gb|AC009148.11| Homo sapiens chromosome 16 clone RP11-55K13, complete sequence Length = 157518 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 137 ggaggagcagagagagggggtgat 160 ||||||| |||||||||||||||| Sbjct: 148722 ggaggagaagagagagggggtgat 148745
>gb|AC013471.7| Homo sapiens BAC clone RP11-489A14 from 2, complete sequence Length = 145040 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 23 gagctcctcctcctcctctc 42 |||||||||||||||||||| Sbjct: 85021 gagctcctcctcctcctctc 85040
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 361 acggcgtcggctggagcccc 380 |||||||||||||||||||| Sbjct: 6944186 acggcgtcggctggagcccc 6944205
>gb|AC130289.11| Homo sapiens chromosome 17, clone RP1-66C13, complete sequence Length = 136599 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 134 agaggaggagcagagagagg 153 |||||||||||||||||||| Sbjct: 105383 agaggaggagcagagagagg 105402
>gb|AC122129.9| Homo sapiens chromosome 17, clone RP1-253P7, complete sequence Length = 159868 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 259 cggccaagcagggcccactg 278 |||||||||||||||||||| Sbjct: 55974 cggccaagcagggcccactg 55993
>gb|AY135690.1| Mus musculus argonaute 4 protein (Ago4) gene, complete cds Length = 92047 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 283 ggaggatccctgggctgtctggcc 306 ||||||||||||||||| |||||| Sbjct: 20475 ggaggatccctgggctggctggcc 20452
>dbj|AB026295.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, clone:P0681F10 Length = 170371 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 25 gctcctcctcctcctctccg 44 |||||||||||||||||||| Sbjct: 64733 gctcctcctcctcctctccg 64752
>dbj|AP003311.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0024G09 Length = 175565 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 cgagctcctcctcctcctct 41 |||||||||||||||||||| Sbjct: 3267 cgagctcctcctcctcctct 3286
>dbj|AP002483.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0019D06 Length = 167405 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 cgagctcctcctcctcctct 41 |||||||||||||||||||| Sbjct: 57801 cgagctcctcctcctcctct 57820
>dbj|AP004744.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBb0065C04 Length = 165270 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 104 cagtgggccaaacctgtcag 123 |||||||||||||||||||| Sbjct: 71474 cagtgggccaaacctgtcag 71493
>dbj|AP005090.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1065_E04 Length = 115865 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 26 ctcctcctcctcctctccgt 45 |||||||||||||||||||| Sbjct: 73345 ctcctcctcctcctctccgt 73364
>dbj|AP005426.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0668D04 Length = 148848 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 26 ctcctcctcctcctctccgt 45 |||||||||||||||||||| Sbjct: 27814 ctcctcctcctcctctccgt 27833
>dbj|AP005429.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0701F11 Length = 154950 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 26 ctcctcctcctcctctccgt 45 |||||||||||||||||||| Sbjct: 105617 ctcctcctcctcctctccgt 105636
>emb|BX678775.3| Mouse DNA sequence from clone RP24-82E8 on chromosome 11, complete sequence Length = 65735 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 26 ctcctcctcctcctctccgttcct 49 |||||||||||||||||| ||||| Sbjct: 20796 ctcctcctcctcctctcccttcct 20773
>dbj|BS000191.1| Pan troglodytes chromosome 22 clone:PTB-015O01, map 22, complete sequences Length = 155412 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 389 ctacagcttcaaagttcctg 408 |||||||||||||||||||| Sbjct: 115900 ctacagcttcaaagttcctg 115919
>dbj|BS000035.1| Pan troglodytes chromosome 22 clone:PTB-089G12, map 22, complete sequences Length = 225055 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 26 ctcctcctcctcctctccgt 45 |||||||||||||||||||| Sbjct: 153193 ctcctcctcctcctctccgt 153212
>dbj|AP005620.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0680F05 Length = 185495 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 26 ctcctcctcctcctctccgt 45 |||||||||||||||||||| Sbjct: 74046 ctcctcctcctcctctccgt 74027
>dbj|AP005618.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0509D04 Length = 140666 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 26 ctcctcctcctcctctccgt 45 |||||||||||||||||||| Sbjct: 97883 ctcctcctcctcctctccgt 97864
>emb|AL845357.6| Zebrafish DNA sequence from clone DKEY-202M22 in linkage group 20, complete sequence Length = 221012 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 26 ctcctcctcctcctctccgt 45 |||||||||||||||||||| Sbjct: 67322 ctcctcctcctcctctccgt 67341
>dbj|AK111842.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023140K06, full insert sequence Length = 2413 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 26 ctcctcctcctcctctccgt 45 |||||||||||||||||||| Sbjct: 122 ctcctcctcctcctctccgt 141
>dbj|AK073786.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033067G01, full insert sequence Length = 1620 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 26 ctcctcctcctcctctccgt 45 |||||||||||||||||||| Sbjct: 161 ctcctcctcctcctctccgt 180
>emb|AJ271791.1|HSA271791 Homo sapiens partial RAI1 gene for retinoid-acid induced protein 1, exons 1-7 Length = 23843 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 259 cggccaagcagggcccactg 278 |||||||||||||||||||| Sbjct: 14876 cggccaagcagggcccactg 14895
>emb|AJ271790.1|HSA271790 Homo sapiens mRNA for retinoid-acid induced protein 1 (RAI1 gene) Length = 5667 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 259 cggccaagcagggcccactg 278 |||||||||||||||||||| Sbjct: 4952 cggccaagcagggcccactg 4971
>dbj|AK064394.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-108-G02, full insert sequence Length = 1365 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 26 ctcctcctcctcctctccgt 45 |||||||||||||||||||| Sbjct: 149 ctcctcctcctcctctccgt 168
>gb|AC138272.11| Mus musculus chromosome 7, clone RP23-91H13, complete sequence Length = 234237 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 132 gaagaggaggagcagagagagggg 155 |||||||||||| ||||||||||| Sbjct: 151805 gaagaggaggaggagagagagggg 151782
>dbj|AB089197.1| Hordeum vulgare HvNHX1 mRNA for sodium/proton antiporter, complete cds Length = 2564 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 20 gccgagctcctcctcctcct 39 |||||||||||||||||||| Sbjct: 207 gccgagctcctcctcctcct 188
>gb|AC005697.1|AC005697 Homo sapiens chromosome 17, clone hRPK.138_P_22, complete sequence Length = 174503 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 134 agaggaggagcagagagagg 153 |||||||||||||||||||| Sbjct: 16004 agaggaggagcagagagagg 16023
>emb|AL354000.7|HS253P07 Homo from PAC RP1-253P07 and PAC RP1-281I13 (complete covert by PAC RP1-253P07), complete sequence Length = 159876 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 259 cggccaagcagggcccactg 278 |||||||||||||||||||| Sbjct: 103895 cggccaagcagggcccactg 103876
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 232 ttggttttgcaggtgatggc 251 |||||||||||||||||||| Sbjct: 12361991 ttggttttgcaggtgatggc 12361972
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 24 agctcctcctcctcctctcc 43 |||||||||||||||||||| Sbjct: 22640422 agctcctcctcctcctctcc 22640441
>ref|NM_178252.2| Mus musculus sorting nexin 26 (Snx26), mRNA Length = 4415 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 284 gaggatccctgggctgtctggccc 307 ||||||||||| |||||||||||| Sbjct: 1292 gaggatccctgagctgtctggccc 1315
>gb|AC148018.3| Mus musculus BAC clone RP23-45G4 from 5, complete sequence Length = 234240 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 129 catgaagaggaggagcagag 148 |||||||||||||||||||| Sbjct: 121458 catgaagaggaggagcagag 121477
>gb|AC132126.3| Mus musculus BAC clone RP23-400E10 from 8, complete sequence Length = 204800 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 140 ggagcagagagagggggtgatggc 163 ||||||| |||||||||||||||| Sbjct: 98631 ggagcagggagagggggtgatggc 98608
>gb|AC149609.5| Mus musculus BAC clone RP23-442K4 from 7, complete sequence Length = 196912 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 284 gaggatccctgggctgtctggccc 307 ||||||||||| |||||||||||| Sbjct: 53454 gaggatccctgagctgtctggccc 53431
>gb|AC118226.7| Mus musculus chromosome 5, clone RP23-372N19, complete sequence Length = 173599 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 24 agctcctcctcctcctctcc 43 |||||||||||||||||||| Sbjct: 27799 agctcctcctcctcctctcc 27780
>emb|AL845367.6| Zebrafish DNA sequence from clone DKEYP-33D4 in linkage group 20, complete sequence Length = 104646 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 26 ctcctcctcctcctctccgt 45 |||||||||||||||||||| Sbjct: 42109 ctcctcctcctcctctccgt 42090
>gb|M26652.1|MUSERPC Mouse erythropoietin gene, 5' flank Length = 2975 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 129 catgaagaggaggagcagag 148 |||||||||||||||||||| Sbjct: 326 catgaagaggaggagcagag 307
>emb|AL603868.15| Mouse DNA sequence from clone RP23-101J23 on chromosome 11, complete sequence Length = 209068 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 131 tgaagaggaggagcagagagaggg 154 ||||||||||| |||||||||||| Sbjct: 48559 tgaagaggaggcgcagagagaggg 48582
>emb|AL772372.4| Mouse DNA sequence from clone RP23-375N21 on chromosome 2, complete sequence Length = 210503 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 26 ctcctcctcctcctctccgt 45 |||||||||||||||||||| Sbjct: 6093 ctcctcctcctcctctccgt 6074
>emb|AL354047.6|HS66C13 Homo sapiens chromosome 17 from PAC RPCI-1 66C13 map 17p11.2 region D17S842-D17S953, complete sequence Length = 156907 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 134 agaggaggagcagagagagg 153 |||||||||||||||||||| Sbjct: 105382 agaggaggagcagagagagg 105401
>emb|AL663027.9| Mouse DNA sequence from clone RP23-16P3 on chromosome 2, complete sequence Length = 219778 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 26 ctcctcctcctcctctccgttcct 49 |||||||||||||||||| ||||| Sbjct: 184870 ctcctcctcctcctctcccttcct 184893
>emb|AL606935.8| Mouse DNA sequence from clone RP23-204N19 on chromosome 4, complete sequence Length = 213391 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 283 ggaggatccctgggctgtctggcc 306 ||||||||||||||||| |||||| Sbjct: 96973 ggaggatccctgggctggctggcc 96996
>emb|AL844180.6| Mouse DNA sequence from clone RP23-403A4 on chromosome 4, complete sequence Length = 213870 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 133 aagaggaggagcagagagaggggg 156 ||||||||||| |||||||||||| Sbjct: 134099 aagaggaggaggagagagaggggg 134076
>emb|AL834486.1|HSM805594 Homo sapiens mRNA; cDNA DKFZp434O1430 (from clone DKFZp434O1430) Length = 3234 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 259 cggccaagcagggcccactg 278 |||||||||||||||||||| Sbjct: 1274 cggccaagcagggcccactg 1293
>emb|AL834468.1|HSM805571 Homo sapiens mRNA; cDNA DKFZp762L0710 (from clone DKFZp762L0710) Length = 5359 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 259 cggccaagcagggcccactg 278 |||||||||||||||||||| Sbjct: 3426 cggccaagcagggcccactg 3445
>emb|AL133649.1|HSM801433 Homo sapiens mRNA; cDNA DKFZp434A139 (from clone DKFZp434A139) Length = 2660 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 259 cggccaagcagggcccactg 278 |||||||||||||||||||| Sbjct: 748 cggccaagcagggcccactg 767 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,833,058 Number of Sequences: 3902068 Number of extensions: 4833058 Number of successful extensions: 488822 Number of sequences better than 10.0: 182 Number of HSP's better than 10.0 without gapping: 188 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 484067 Number of HSP's gapped (non-prelim): 4754 length of query: 446 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 424 effective length of database: 17,147,199,772 effective search space: 7270412703328 effective search space used: 7270412703328 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
