ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal22f16
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|BT009272.1| Triticum aestivum clone wlk8.pk0011.e10:fis, full... 515 e-143
2ref|XM_469653.1| Oryza sativa (japonica cultivar-group), mRNA 359 3e-96
3dbj|AK119226.1| Oryza sativa (japonica cultivar-group) cDNA clon... 359 3e-96
4dbj|AK100404.1| Oryza sativa (japonica cultivar-group) cDNA clon... 359 3e-96
5dbj|AK060674.1| Oryza sativa (japonica cultivar-group) cDNA clon... 359 3e-96
6gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 127 2e-26
7gb|AY387483.1| Oryza sativa (japonica cultivar-group) BAC OSJNBa... 127 2e-26
8gb|AC117988.3| Oryza sativa chromosome 3 BAC OSJNBa0057G07 genom... 127 2e-26
9dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 127 2e-26
10dbj|AK063056.1| Oryza sativa (japonica cultivar-group) cDNA clon... 127 2e-26
11emb|Z25863.1|STGHMT S.tuberosum mRNA for glycine hydroxymethyltr... 76 7e-11
12emb|Z25860.1|FPGHMT2 Flaveria pringlei mRNA for glycine hydroxym... 68 2e-08
13emb|Z25859.1|FPGHMT1 Flaveria pringlei mRNA for glycine hydroxym... 68 2e-08
14ref|NM_119954.2| Arabidopsis thaliana SHM1 (SERINE HYDROXYMETHYL... 60 4e-06
15gb|BT013569.1| Lycopersicon esculentum clone 132307R, mRNA sequence 60 4e-06
16emb|AJ271726.1|ATH271726 Arabidopsis thaliana mRNA for serine hy... 60 4e-06
17gb|AY070726.1| Arabidopsis thaliana AT4g37930/F20D10_50 mRNA, co... 60 4e-06
18gb|AY057645.1| Arabidopsis thaliana AT4g37930/F20D10_50 mRNA, co... 60 4e-06
19gb|AF428388.1|AF428388 Arabidopsis thaliana AT4g37930/F20D10_50 ... 60 4e-06
20gb|AY054254.1| Arabidopsis thaliana AT4g37930/F20D10_50 mRNA, co... 60 4e-06
21gb|BT006353.1| Arabidopsis thaliana At4g37930/F20D10_50 gene, co... 60 4e-06
22emb|BX828432.1|CNS0A3VV Arabidopsis thaliana Full-length cDNA Co... 60 4e-06
23gb|AY089107.1| Arabidopsis thaliana clone 33799 mRNA, complete s... 60 4e-06
24gb|AC120991.3| Oryza sativa (japonica cultivar-group) chromosome... 56 7e-05
25dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 56 7e-05
26dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 56 7e-05
27dbj|AP003294.2| Oryza sativa (japonica cultivar-group) genomic D... 56 7e-05
28dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 54 3e-04
29gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 54 3e-04
30emb|AL954160.5|CNS08CCY Oryza sativa chromosome 12, . BAC OSJNBb... 54 3e-04
31emb|AL831806.5|CNS08CAJ Oryza sativa chromosome 12, . BAC OSJNBb... 54 3e-04
32dbj|AK101088.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.004
33emb|AL713942.4|CNS07YPB Oryza sativa chromosome 12, . BAC OSJNBa... 50 0.004
34emb|AL954826.3|CNS08CD2 Oryza sativa chromosome 12, . BAC OSJNBb... 50 0.004
35emb|AL161592.2|ATCHRIV88 Arabidopsis thaliana DNA chromosome 4, ... 48 0.016
36emb|AL035538.1|ATF20D10 Arabidopsis thaliana DNA chromosome 4, B... 48 0.016
37dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.016
38dbj|AP003452.3| Oryza sativa (japonica cultivar-group) genomic D... 48 0.016
39dbj|AP003347.3| Oryza sativa (japonica cultivar-group) genomic D... 48 0.016
40dbj|AP003876.3| Oryza sativa (japonica cultivar-group) genomic D... 48 0.016
41dbj|AK110519.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.016
42gb|DQ139269.1| Medicago truncatula serine hydroxymethyltransfera... 46 0.065
43gb|AC137752.4| Oryza sativa (japonica cultivar-group) chromosome... 44 0.26
44dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.26
45dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.26
46dbj|AP004155.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.26
47dbj|AP005730.2| Oryza sativa (japonica cultivar-group) genomic D... 44 0.26
48dbj|AP005822.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.26
49dbj|AP005695.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.26
50dbj|AP004254.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.26
51dbj|AK105624.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.26
52dbj|AK101450.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.26
53dbj|AK071541.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.26
54gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete... 44 0.26
55gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 44 0.26
56ref|XM_503153.1| Yarrowia lipolytica CLIB122, YALI0D22484g predi... 42 1.0
57gb|AF442558.1| Chlamydomonas reinhardtii serine hydroxymethyltra... 42 1.0
58gb|CP000240.1| Synechococcus sp. JA-2-3B'a(2-13), complete genome 42 1.0
59gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome 42 1.0
60dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 42 1.0
61emb|CR962125.2| Medicago truncatula chromosome 5 clone mth2-179a... 42 1.0
62emb|CR382130.1| Yarrowia lipolytica chromosome D of strain CLIB1... 42 1.0
63dbj|AP004579.1| Lotus japonicus genomic DNA, chromosome 2, clone... 42 1.0
64dbj|AP004578.1| Lotus japonicus genomic DNA, chromosome 2, clone... 42 1.0
65gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete ... 40 4.0
66ref|XM_848436.1| PREDICTED: Canis familiaris similar to junctoph... 40 4.0
67gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hilde... 40 4.0
68dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.0
69dbj|AP004817.3| Oryza sativa (japonica cultivar-group) genomic D... 40 4.0
70dbj|AP005287.3| Oryza sativa (japonica cultivar-group) genomic D... 40 4.0
71gb|AC154667.2| Mus musculus BAC clone RP23-153F8 from 16, comple... 40 4.0
72dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, comp... 40 4.0 
>gb|BT009272.1| Triticum aestivum clone wlk8.pk0011.e10:fis, full insert mRNA
           sequence
          Length = 1878

 Score =  515 bits (260), Expect = e-143
 Identities = 278/284 (97%)
 Strand = Plus / Plus

                                                                       
Query: 21  tggccatggcgacggcgctccgcaagctctccgcccgcggccagcccctctcccgcctca 80
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 70  tggccatggcgacggcgctccgcaagctctccgcccgcggccagcccctctcccgcctca 129

                                                                       
Query: 81  cgccgctctactccatggcgtccctgccggcgacggaggagagatccgcagtcacctggc 140
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130 cgccgctctactccatggcgtccctgccggcgacggaggagagatccgcagtcacctggc 189

                                                                       
Query: 141 cgaagcagctcaacgcgccgctggaggaggtcgacccggagattgccgacatcatcgagc 200
           |||||||| | |||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 190 cgaagcagttgaacgcgccgctggaggaggtcgaccccgagattgccgacatcatcgagc 249

                                                                       
Query: 201 tcgagaaggcccgccaatggaaggggctggagctcatcccgtcggagaacttcacctccc 260
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 tcgagaaggcccgccaatggaaggggctggagctcatcccgtcggagaacttcacctccc 309

                                                       
Query: 261 tgtcggtgatgcaagccgtgggatccgtcatgacgaacaagtac 304
           ||||||||||||| || ||||||||||||||||| |||||||||
Sbjct: 310 tgtcggtgatgcaggcggtgggatccgtcatgaccaacaagtac 353
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>ref|XM_469653.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2052

 Score =  359 bits (181), Expect = 3e-96
 Identities = 264/293 (90%), Gaps = 9/293 (3%)
 Strand = Plus / Plus

                                                                       
Query: 21  tggccatggcgacggcgctccgcaagctctccgcc---------cgcggccagcccctct 71
           |||||||||||||||||||||||||||||||| ||         ||| ||||||| ||||
Sbjct: 134 tggccatggcgacggcgctccgcaagctctcctccgacgccctccgccgccagccgctct 193

                                                                       
Query: 72  cccgcctcacgccgctctactccatggcgtccctgccggcgacggaggagagatccgcag 131
           ||||| |||| |||||||||| ||||||||||||||||||||||||||||||||||| ||
Sbjct: 194 cccgcatcaccccgctctactacatggcgtccctgccggcgacggaggagagatccggag 253

                                                                       
Query: 132 tcacctggccgaagcagctcaacgcgccgctggaggaggtcgacccggagattgccgaca 191
           ||||||||||||||||||| |||||||||||||||||||| || || ||||| |||||||
Sbjct: 254 tcacctggccgaagcagctgaacgcgccgctggaggaggtggatcccgagatcgccgaca 313

                                                                       
Query: 192 tcatcgagctcgagaaggcccgccaatggaaggggctggagctcatcccgtcggagaact 251
           ||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 314 tcatcgagcacgagaaggcccgccaatggaagggtctggagctcatcccgtcggagaact 373

                                                                
Query: 252 tcacctccctgtcggtgatgcaagccgtgggatccgtcatgacgaacaagtac 304
           |||||||  |||| |||||||| || ||||||||||||||||| |||||||||
Sbjct: 374 tcacctcggtgtcagtgatgcaggcggtgggatccgtcatgaccaacaagtac 426
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>dbj|AK119226.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-100-H12, full
           insert sequence
          Length = 1923

 Score =  359 bits (181), Expect = 3e-96
 Identities = 264/293 (90%), Gaps = 9/293 (3%)
 Strand = Plus / Plus

                                                                       
Query: 21  tggccatggcgacggcgctccgcaagctctccgcc---------cgcggccagcccctct 71
           |||||||||||||||||||||||||||||||| ||         ||| ||||||| ||||
Sbjct: 57  tggccatggcgacggcgctccgcaagctctcctccgacgccctccgccgccagccgctct 116

                                                                       
Query: 72  cccgcctcacgccgctctactccatggcgtccctgccggcgacggaggagagatccgcag 131
           ||||| |||| |||||||||| ||||||||||||||||||||||||||||||||||| ||
Sbjct: 117 cccgcatcaccccgctctactacatggcgtccctgccggcgacggaggagagatccggag 176

                                                                       
Query: 132 tcacctggccgaagcagctcaacgcgccgctggaggaggtcgacccggagattgccgaca 191
           ||||||||||||||||||| |||||||||||||||||||| || || ||||| |||||||
Sbjct: 177 tcacctggccgaagcagctgaacgcgccgctggaggaggtggatcccgagatcgccgaca 236

                                                                       
Query: 192 tcatcgagctcgagaaggcccgccaatggaaggggctggagctcatcccgtcggagaact 251
           ||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 237 tcatcgagcacgagaaggcccgccaatggaagggtctggagctcatcccgtcggagaact 296

                                                                
Query: 252 tcacctccctgtcggtgatgcaagccgtgggatccgtcatgacgaacaagtac 304
           |||||||  |||| |||||||| || ||||||||||||||||| |||||||||
Sbjct: 297 tcacctcggtgtcagtgatgcaggcggtgggatccgtcatgaccaacaagtac 349
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>dbj|AK100404.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023086P20, full
           insert sequence
          Length = 1976

 Score =  359 bits (181), Expect = 3e-96
 Identities = 264/293 (90%), Gaps = 9/293 (3%)
 Strand = Plus / Plus

                                                                       
Query: 21  tggccatggcgacggcgctccgcaagctctccgcc---------cgcggccagcccctct 71
           |||||||||||||||||||||||||||||||| ||         ||| ||||||| ||||
Sbjct: 58  tggccatggcgacggcgctccgcaagctctcctccgacgccctccgccgccagccgctct 117

                                                                       
Query: 72  cccgcctcacgccgctctactccatggcgtccctgccggcgacggaggagagatccgcag 131
           ||||| |||| |||||||||| ||||||||||||||||||||||||||||||||||| ||
Sbjct: 118 cccgcatcaccccgctctactacatggcgtccctgccggcgacggaggagagatccggag 177

                                                                       
Query: 132 tcacctggccgaagcagctcaacgcgccgctggaggaggtcgacccggagattgccgaca 191
           ||||||||||||||||||| |||||||||||||||||||| || || ||||| |||||||
Sbjct: 178 tcacctggccgaagcagctgaacgcgccgctggaggaggtggatcccgagatcgccgaca 237

                                                                       
Query: 192 tcatcgagctcgagaaggcccgccaatggaaggggctggagctcatcccgtcggagaact 251
           ||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 238 tcatcgagcacgagaaggcccgccaatggaagggtctggagctcatcccgtcggagaact 297

                                                                
Query: 252 tcacctccctgtcggtgatgcaagccgtgggatccgtcatgacgaacaagtac 304
           |||||||  |||| |||||||| || ||||||||||||||||| |||||||||
Sbjct: 298 tcacctcggtgtcagtgatgcaggcggtgggatccgtcatgaccaacaagtac 350
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>dbj|AK060674.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-029-A01, full
           insert sequence
          Length = 1844

 Score =  359 bits (181), Expect = 3e-96
 Identities = 264/293 (90%), Gaps = 9/293 (3%)
 Strand = Plus / Plus

                                                                       
Query: 21  tggccatggcgacggcgctccgcaagctctccgcc---------cgcggccagcccctct 71
           |||||||||||||||||||||||||||||||| ||         ||| ||||||| ||||
Sbjct: 50  tggccatggcgacggcgctccgcaagctctcctccgacgccctccgccgccagccgctct 109

                                                                       
Query: 72  cccgcctcacgccgctctactccatggcgtccctgccggcgacggaggagagatccgcag 131
           ||||| |||| |||||||||| ||||||||||||||||||||||||||||||||||| ||
Sbjct: 110 cccgcatcaccccgctctactacatggcgtccctgccggcgacggaggagagatccggag 169

                                                                       
Query: 132 tcacctggccgaagcagctcaacgcgccgctggaggaggtcgacccggagattgccgaca 191
           ||||||||||||||||||| |||||||||||||||||||| || || ||||| |||||||
Sbjct: 170 tcacctggccgaagcagctgaacgcgccgctggaggaggtggatcccgagatcgccgaca 229

                                                                       
Query: 192 tcatcgagctcgagaaggcccgccaatggaaggggctggagctcatcccgtcggagaact 251
           ||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 230 tcatcgagcacgagaaggcccgccaatggaagggtctggagctcatcccgtcggagaact 289

                                                                
Query: 252 tcacctccctgtcggtgatgcaagccgtgggatccgtcatgacgaacaagtac 304
           |||||||  |||| |||||||| || ||||||||||||||||| |||||||||
Sbjct: 290 tcacctcggtgtcagtgatgcaggcggtgggatccgtcatgaccaacaagtac 342
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  127 bits (64), Expect = 2e-26
 Identities = 82/88 (93%)
 Strand = Plus / Plus

                                                                            
Query: 137      tggccgaagcagctcaacgcgccgctggaggaggtcgacccggagattgccgacatcatc 196
                |||||||||||||| |||||||||||||||||||| || || ||||| ||||||||||||
Sbjct: 30007717 tggccgaagcagctgaacgcgccgctggaggaggtggatcccgagatcgccgacatcatc 30007776

                                            
Query: 197      gagctcgagaaggcccgccaatggaagg 224
                |||| |||||||||||||||||||||||
Sbjct: 30007777 gagcacgagaaggcccgccaatggaagg 30007804



 Score =  109 bits (55), Expect = 5e-21
 Identities = 76/83 (91%)
 Strand = Plus / Plus

                                                                            
Query: 222      aggggctggagctcatcccgtcggagaacttcacctccctgtcggtgatgcaagccgtgg 281
                |||| ||||||||||||||||||||||||||||||||  |||| |||||||| || ||||
Sbjct: 30007894 agggtctggagctcatcccgtcggagaacttcacctcggtgtcagtgatgcaggcggtgg 30007953

                                       
Query: 282      gatccgtcatgacgaacaagtac 304
                ||||||||||||| |||||||||
Sbjct: 30007954 gatccgtcatgaccaacaagtac 30007976



 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 39/40 (97%)
 Strand = Plus / Plus

                                                        
Query: 97       ggcgtccctgccggcgacggaggagagatccgcagtcacc 136
                |||||||||||||||||||||||||||||||| |||||||
Sbjct: 30007561 ggcgtccctgccggcgacggaggagagatccggagtcacc 30007600



 Score = 63.9 bits (32), Expect = 3e-07
 Identities = 32/32 (100%)
 Strand = Plus / Plus

                                                
Query: 21       tggccatggcgacggcgctccgcaagctctcc 52
                ||||||||||||||||||||||||||||||||
Sbjct: 30007359 tggccatggcgacggcgctccgcaagctctcc 30007390
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>gb|AY387483.1| Oryza sativa (japonica cultivar-group) BAC OSJNBa0084L17, complete
            sequence
          Length = 159661

 Score =  127 bits (64), Expect = 2e-26
 Identities = 82/88 (93%)
 Strand = Plus / Minus

                                                                        
Query: 137  tggccgaagcagctcaacgcgccgctggaggaggtcgacccggagattgccgacatcatc 196
            |||||||||||||| |||||||||||||||||||| || || ||||| ||||||||||||
Sbjct: 2889 tggccgaagcagctgaacgcgccgctggaggaggtggatcccgagatcgccgacatcatc 2830

                                        
Query: 197  gagctcgagaaggcccgccaatggaagg 224
            |||| |||||||||||||||||||||||
Sbjct: 2829 gagcacgagaaggcccgccaatggaagg 2802



 Score =  109 bits (55), Expect = 5e-21
 Identities = 76/83 (91%)
 Strand = Plus / Minus

                                                                        
Query: 222  aggggctggagctcatcccgtcggagaacttcacctccctgtcggtgatgcaagccgtgg 281
            |||| ||||||||||||||||||||||||||||||||  |||| |||||||| || ||||
Sbjct: 2712 agggtctggagctcatcccgtcggagaacttcacctcggtgtcagtgatgcaggcggtgg 2653

                                   
Query: 282  gatccgtcatgacgaacaagtac 304
            ||||||||||||| |||||||||
Sbjct: 2652 gatccgtcatgaccaacaagtac 2630



 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 39/40 (97%)
 Strand = Plus / Minus

                                                    
Query: 97   ggcgtccctgccggcgacggaggagagatccgcagtcacc 136
            |||||||||||||||||||||||||||||||| |||||||
Sbjct: 3045 ggcgtccctgccggcgacggaggagagatccggagtcacc 3006



 Score = 63.9 bits (32), Expect = 3e-07
 Identities = 32/32 (100%)
 Strand = Plus / Minus

                                            
Query: 21   tggccatggcgacggcgctccgcaagctctcc 52
            ||||||||||||||||||||||||||||||||
Sbjct: 3247 tggccatggcgacggcgctccgcaagctctcc 3216
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>gb|AC117988.3| Oryza sativa chromosome 3 BAC OSJNBa0057G07 genomic sequence, complete
              sequence
          Length = 155106

 Score =  127 bits (64), Expect = 2e-26
 Identities = 82/88 (93%)
 Strand = Plus / Minus

                                                                          
Query: 137    tggccgaagcagctcaacgcgccgctggaggaggtcgacccggagattgccgacatcatc 196
              |||||||||||||| |||||||||||||||||||| || || ||||| ||||||||||||
Sbjct: 100034 tggccgaagcagctgaacgcgccgctggaggaggtggatcccgagatcgccgacatcatc 99975

                                          
Query: 197    gagctcgagaaggcccgccaatggaagg 224
              |||| |||||||||||||||||||||||
Sbjct: 99974  gagcacgagaaggcccgccaatggaagg 99947



 Score =  109 bits (55), Expect = 5e-21
 Identities = 76/83 (91%)
 Strand = Plus / Minus

                                                                         
Query: 222   aggggctggagctcatcccgtcggagaacttcacctccctgtcggtgatgcaagccgtgg 281
             |||| ||||||||||||||||||||||||||||||||  |||| |||||||| || ||||
Sbjct: 99857 agggtctggagctcatcccgtcggagaacttcacctcggtgtcagtgatgcaggcggtgg 99798

                                    
Query: 282   gatccgtcatgacgaacaagtac 304
             ||||||||||||| |||||||||
Sbjct: 99797 gatccgtcatgaccaacaagtac 99775



 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 39/40 (97%)
 Strand = Plus / Minus

                                                      
Query: 97     ggcgtccctgccggcgacggaggagagatccgcagtcacc 136
              |||||||||||||||||||||||||||||||| |||||||
Sbjct: 100190 ggcgtccctgccggcgacggaggagagatccggagtcacc 100151



 Score = 63.9 bits (32), Expect = 3e-07
 Identities = 32/32 (100%)
 Strand = Plus / Minus

                                              
Query: 21     tggccatggcgacggcgctccgcaagctctcc 52
              ||||||||||||||||||||||||||||||||
Sbjct: 100392 tggccatggcgacggcgctccgcaagctctcc 100361
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  127 bits (64), Expect = 2e-26
 Identities = 82/88 (93%)
 Strand = Plus / Plus

                                                                            
Query: 137      tggccgaagcagctcaacgcgccgctggaggaggtcgacccggagattgccgacatcatc 196
                |||||||||||||| |||||||||||||||||||| || || ||||| ||||||||||||
Sbjct: 30099139 tggccgaagcagctgaacgcgccgctggaggaggtggatcccgagatcgccgacatcatc 30099198

                                            
Query: 197      gagctcgagaaggcccgccaatggaagg 224
                |||| |||||||||||||||||||||||
Sbjct: 30099199 gagcacgagaaggcccgccaatggaagg 30099226



 Score =  109 bits (55), Expect = 5e-21
 Identities = 76/83 (91%)
 Strand = Plus / Plus

                                                                            
Query: 222      aggggctggagctcatcccgtcggagaacttcacctccctgtcggtgatgcaagccgtgg 281
                |||| ||||||||||||||||||||||||||||||||  |||| |||||||| || ||||
Sbjct: 30099316 agggtctggagctcatcccgtcggagaacttcacctcggtgtcagtgatgcaggcggtgg 30099375

                                       
Query: 282      gatccgtcatgacgaacaagtac 304
                ||||||||||||| |||||||||
Sbjct: 30099376 gatccgtcatgaccaacaagtac 30099398



 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 39/40 (97%)
 Strand = Plus / Plus

                                                        
Query: 97       ggcgtccctgccggcgacggaggagagatccgcagtcacc 136
                |||||||||||||||||||||||||||||||| |||||||
Sbjct: 30098983 ggcgtccctgccggcgacggaggagagatccggagtcacc 30099022



 Score = 63.9 bits (32), Expect = 3e-07
 Identities = 32/32 (100%)
 Strand = Plus / Plus

                                                
Query: 21       tggccatggcgacggcgctccgcaagctctcc 52
                ||||||||||||||||||||||||||||||||
Sbjct: 30098781 tggccatggcgacggcgctccgcaagctctcc 30098812
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>dbj|AK063056.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-110-F04, full
           insert sequence
          Length = 791

 Score =  127 bits (64), Expect = 2e-26
 Identities = 82/88 (93%)
 Strand = Plus / Plus

                                                                       
Query: 137 tggccgaagcagctcaacgcgccgctggaggaggtcgacccggagattgccgacatcatc 196
           |||||||||||||| |||||||||||||||||||| || || ||||| ||||||||||||
Sbjct: 89  tggccgaagcagctgaacgcgccgctggaggaggtggatcccgagatcgccgacatcatc 148

                                       
Query: 197 gagctcgagaaggcccgccaatggaagg 224
           |||| |||||||||||||||||||||||
Sbjct: 149 gagcacgagaaggcccgccaatggaagg 176



 Score =  109 bits (55), Expect = 5e-21
 Identities = 76/83 (91%)
 Strand = Plus / Plus

                                                                       
Query: 222 aggggctggagctcatcccgtcggagaacttcacctccctgtcggtgatgcaagccgtgg 281
           |||| ||||||||||||||||||||||||||||||||  |||| |||||||| || ||||
Sbjct: 266 agggtctggagctcatcccgtcggagaacttcacctcggtgtcagtgatgcaggcggtgg 325

                                  
Query: 282 gatccgtcatgacgaacaagtac 304
           ||||||||||||| |||||||||
Sbjct: 326 gatccgtcatgaccaacaagtac 348
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>emb|Z25863.1|STGHMT S.tuberosum mRNA for glycine hydroxymethyltransferase
          Length = 1745

 Score = 75.8 bits (38), Expect = 7e-11
 Identities = 104/126 (82%)
 Strand = Plus / Plus

                                                                       
Query: 179 gagattgccgacatcatcgagctcgagaaggcccgccaatggaaggggctggagctcatc 238
           |||||||| ||||| || ||||  ||||| || ||||||||||||||||| || ||||| 
Sbjct: 189 gagattgctgacattattgagcatgagaaagcacgccaatggaaggggctcgaactcatt 248

                                                                       
Query: 239 ccgtcggagaacttcacctccctgtcggtgatgcaagccgtgggatccgtcatgacgaac 298
           || || || || ||||| ||  | |||||||||||||| || ||||| |||||||| |||
Sbjct: 249 ccatcagaaaatttcacttctgtttcggtgatgcaagcagttggatcagtcatgactaac 308

                 
Query: 299 aagtac 304
           ||||||
Sbjct: 309 aagtac 314
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>emb|Z25860.1|FPGHMT2 Flaveria pringlei mRNA for glycine hydroxymethyltransferase
          Length = 1779

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 100/122 (81%)
 Strand = Plus / Plus

                                                                       
Query: 179 gagattgccgacatcatcgagctcgagaaggcccgccaatggaaggggctggagctcatc 238
           |||||||| || || || ||||| || ||||| || ||||||||||| || || ||||| 
Sbjct: 208 gagattgctgatattattgagcttgaaaaggctcggcaatggaagggtcttgaactcata 267

                                                                       
Query: 239 ccgtcggagaacttcacctccctgtcggtgatgcaagccgtgggatccgtcatgacgaac 298
           |  || |||||||| ||||||||||| ||||||||||| || ||||| || ||||| |||
Sbjct: 268 ctctcagagaactttacctccctgtcagtgatgcaagcagttggatctgtgatgactaac 327

             
Query: 299 aa 300
           ||
Sbjct: 328 aa 329
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>emb|Z25859.1|FPGHMT1 Flaveria pringlei mRNA for glycine hydroxymethyltransferase
          Length = 1746

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 136/170 (80%)
 Strand = Plus / Plus

                                                                       
Query: 131 gtcacctggccgaagcagctcaacgcgccgctggaggaggtcgacccggagattgccgac 190
           ||||| |||||||||||| | || || ||||| ||||  || || || ||||| || || 
Sbjct: 169 gtcacttggccgaagcagttgaatgctccgcttgaggttgtggatcctgagatcgcggat 228

                                                                       
Query: 191 atcatcgagctcgagaaggcccgccaatggaaggggctggagctcatcccgtcggagaac 250
           || || ||||| || ||||| || ||||||||||| || || ||||| || || ||||||
Sbjct: 229 attattgagcttgaaaaggctcggcaatggaagggtcttgaactcataccatcagagaac 288

                                                             
Query: 251 ttcacctccctgtcggtgatgcaagccgtgggatccgtcatgacgaacaa 300
           || ||||| || || ||||||||||| || |||||||| ||||| |||||
Sbjct: 289 tttacctctctatcagtgatgcaagcagttggatccgtgatgaccaacaa 338
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>ref|NM_119954.2| Arabidopsis thaliana SHM1 (SERINE HYDROXYMETHYLTRANSFERASE 1);
           glycine hydroxymethyltransferase AT4G37930 (SHM1) mRNA,
           complete cds
          Length = 1822

 Score = 60.0 bits (30), Expect = 4e-06
 Identities = 135/170 (79%)
 Strand = Plus / Plus

                                                                       
Query: 131 gtcacctggccgaagcagctcaacgcgccgctggaggaggtcgacccggagattgccgac 190
           ||||| ||||| || ||||| ||||| ||  | |||||||| || || |||||||| |||
Sbjct: 256 gtcacttggccaaaacagcttaacgcacctttagaggaggttgatcctgagattgctgac 315

                                                                       
Query: 191 atcatcgagctcgagaaggcccgccaatggaaggggctggagctcatcccgtcggagaac 250
           || || ||||  ||||| ||  | ||||||||||| || || || || || || ||||||
Sbjct: 316 attattgagcatgagaaagctagacaatggaagggacttgaacttattccatctgagaac 375

                                                             
Query: 251 ttcacctccctgtcggtgatgcaagccgtgggatccgtcatgacgaacaa 300
           ||||| ||  |||||||||||||||| || || || |||||||| |||||
Sbjct: 376 ttcacatctgtgtcggtgatgcaagctgttgggtctgtcatgactaacaa 425
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>gb|BT013569.1| Lycopersicon esculentum clone 132307R, mRNA sequence
          Length = 1923

 Score = 60.0 bits (30), Expect = 4e-06
 Identities = 99/122 (81%)
 Strand = Plus / Plus

                                                                       
Query: 179 gagattgccgacatcatcgagctcgagaaggcccgccaatggaaggggctggagctcatc 238
           |||||||||||||| || ||||  ||||| ||  | ||||||||||| || ||||| |||
Sbjct: 223 gagattgccgacattattgagcatgagaaagctaggcaatggaagggtcttgagcttatc 282

                                                                       
Query: 239 ccgtcggagaacttcacctccctgtcggtgatgcaagccgtgggatccgtcatgacgaac 298
           || || ||||| || || || ||||| ||||||||||| || ||||| || ||||| |||
Sbjct: 283 ccttcagagaattttacatcactgtcagtgatgcaagcagttggatcagtaatgaccaac 342

             
Query: 299 aa 300
           ||
Sbjct: 343 aa 344
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>emb|AJ271726.1|ATH271726 Arabidopsis thaliana mRNA for serine hydroxymethyl transferase
           (shm1 gene)
          Length = 1797

 Score = 60.0 bits (30), Expect = 4e-06
 Identities = 135/170 (79%)
 Strand = Plus / Plus

                                                                       
Query: 131 gtcacctggccgaagcagctcaacgcgccgctggaggaggtcgacccggagattgccgac 190
           ||||| ||||| || ||||| ||||| ||  | |||||||| || || |||||||| |||
Sbjct: 232 gtcacttggccaaaacagcttaacgcacctttagaggaggttgatcctgagattgctgac 291

                                                                       
Query: 191 atcatcgagctcgagaaggcccgccaatggaaggggctggagctcatcccgtcggagaac 250
           || || ||||  ||||| ||  | ||||||||||| || || || || || || ||||||
Sbjct: 292 attattgagcatgagaaagctagacaatggaagggacttgaacttattccatctgagaac 351

                                                             
Query: 251 ttcacctccctgtcggtgatgcaagccgtgggatccgtcatgacgaacaa 300
           ||||| ||  |||||||||||||||| || || || |||||||| |||||
Sbjct: 352 ttcacatctgtgtcggtgatgcaagctgttgggtctgtcatgactaacaa 401
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>gb|AY070726.1| Arabidopsis thaliana AT4g37930/F20D10_50 mRNA, complete cds
          Length = 1775

 Score = 60.0 bits (30), Expect = 4e-06
 Identities = 135/170 (79%)
 Strand = Plus / Plus

                                                                       
Query: 131 gtcacctggccgaagcagctcaacgcgccgctggaggaggtcgacccggagattgccgac 190
           ||||| ||||| || ||||| ||||| ||  | |||||||| || || |||||||| |||
Sbjct: 240 gtcacttggccaaaacagcttaacgcacctttagaggaggttgatcctgagattgctgac 299

                                                                       
Query: 191 atcatcgagctcgagaaggcccgccaatggaaggggctggagctcatcccgtcggagaac 250
           || || ||||  ||||| ||  | ||||||||||| || || || || || || ||||||
Sbjct: 300 attattgagcatgagaaagctagacaatggaagggacttgaacttattccatctgagaac 359

                                                             
Query: 251 ttcacctccctgtcggtgatgcaagccgtgggatccgtcatgacgaacaa 300
           ||||| ||  |||||||||||||||| || || || |||||||| |||||
Sbjct: 360 ttcacatctgtgtcggtgatgcaagctgttgggtctgtcatgactaacaa 409
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>gb|AY057645.1| Arabidopsis thaliana AT4g37930/F20D10_50 mRNA, complete cds
          Length = 1716

 Score = 60.0 bits (30), Expect = 4e-06
 Identities = 135/170 (79%)
 Strand = Plus / Plus

                                                                       
Query: 131 gtcacctggccgaagcagctcaacgcgccgctggaggaggtcgacccggagattgccgac 190
           ||||| ||||| || ||||| ||||| ||  | |||||||| || || |||||||| |||
Sbjct: 186 gtcacttggccaaaacagcttaacgcacctttagaggaggttgatcctgagattgctgac 245

                                                                       
Query: 191 atcatcgagctcgagaaggcccgccaatggaaggggctggagctcatcccgtcggagaac 250
           || || ||||  ||||| ||  | ||||||||||| || || || || || || ||||||
Sbjct: 246 attattgagcatgagaaagctagacaatggaagggacttgaacttattccatctgagaac 305

                                                             
Query: 251 ttcacctccctgtcggtgatgcaagccgtgggatccgtcatgacgaacaa 300
           ||||| ||  |||||||||||||||| || || || |||||||| |||||
Sbjct: 306 ttcacatctgtgtcggtgatgcaagctgttgggtctgtcatgactaacaa 355
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>gb|AF428388.1|AF428388 Arabidopsis thaliana AT4g37930/F20D10_50 mRNA, complete cds
          Length = 1730

 Score = 60.0 bits (30), Expect = 4e-06
 Identities = 135/170 (79%)
 Strand = Plus / Plus

                                                                       
Query: 131 gtcacctggccgaagcagctcaacgcgccgctggaggaggtcgacccggagattgccgac 190
           ||||| ||||| || ||||| ||||| ||  | |||||||| || || |||||||| |||
Sbjct: 187 gtcacttggccaaaacagcttaacgcacctttagaggaggttgatcctgagattgctgac 246

                                                                       
Query: 191 atcatcgagctcgagaaggcccgccaatggaaggggctggagctcatcccgtcggagaac 250
           || || ||||  ||||| ||  | ||||||||||| || || || || || || ||||||
Sbjct: 247 attattgagcatgagaaagctagacaatggaagggacttgaacttattccatctgagaac 306

                                                             
Query: 251 ttcacctccctgtcggtgatgcaagccgtgggatccgtcatgacgaacaa 300
           ||||| ||  |||||||||||||||| || || || |||||||| |||||
Sbjct: 307 ttcacatctgtgtcggtgatgcaagctgttgggtctgtcatgactaacaa 356
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>gb|AY054254.1| Arabidopsis thaliana AT4g37930/F20D10_50 mRNA, complete cds
          Length = 1770

 Score = 60.0 bits (30), Expect = 4e-06
 Identities = 135/170 (79%)
 Strand = Plus / Plus

                                                                       
Query: 131 gtcacctggccgaagcagctcaacgcgccgctggaggaggtcgacccggagattgccgac 190
           ||||| ||||| || ||||| ||||| ||  | |||||||| || || |||||||| |||
Sbjct: 240 gtcacttggccaaaacagcttaacgcacctttagaggaggttgatcctgagattgctgac 299

                                                                       
Query: 191 atcatcgagctcgagaaggcccgccaatggaaggggctggagctcatcccgtcggagaac 250
           || || ||||  ||||| ||  | ||||||||||| || || || || || || ||||||
Sbjct: 300 attattgagcatgagaaagctagacaatggaagggacttgaacttattccatctgagaac 359

                                                             
Query: 251 ttcacctccctgtcggtgatgcaagccgtgggatccgtcatgacgaacaa 300
           ||||| ||  |||||||||||||||| || || || |||||||| |||||
Sbjct: 360 ttcacatctgtgtcggtgatgcaagctgttgggtctgtcatgactaacaa 409
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>gb|BT006353.1| Arabidopsis thaliana At4g37930/F20D10_50 gene, complete cds
          Length = 1554

 Score = 60.0 bits (30), Expect = 4e-06
 Identities = 135/170 (79%)
 Strand = Plus / Plus

                                                                       
Query: 131 gtcacctggccgaagcagctcaacgcgccgctggaggaggtcgacccggagattgccgac 190
           ||||| ||||| || ||||| ||||| ||  | |||||||| || || |||||||| |||
Sbjct: 133 gtcacttggccaaaacagcttaacgcacctttagaggaggttgatcctgagattgctgac 192

                                                                       
Query: 191 atcatcgagctcgagaaggcccgccaatggaaggggctggagctcatcccgtcggagaac 250
           || || ||||  ||||| ||  | ||||||||||| || || || || || || ||||||
Sbjct: 193 attattgagcatgagaaagctagacaatggaagggacttgaacttattccatctgagaac 252

                                                             
Query: 251 ttcacctccctgtcggtgatgcaagccgtgggatccgtcatgacgaacaa 300
           ||||| ||  |||||||||||||||| || || || |||||||| |||||
Sbjct: 253 ttcacatctgtgtcggtgatgcaagctgttgggtctgtcatgactaacaa 302
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>emb|BX828432.1|CNS0A3VV Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH89ZH08 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1771

 Score = 60.0 bits (30), Expect = 4e-06
 Identities = 135/170 (79%)
 Strand = Plus / Plus

                                                                       
Query: 131 gtcacctggccgaagcagctcaacgcgccgctggaggaggtcgacccggagattgccgac 190
           ||||| ||||| || ||||| ||||| ||  | |||||||| || || |||||||| |||
Sbjct: 229 gtcacttggccaaaacagcttaacgcacctttagaggaggttgatcctgagattgctgac 288

                                                                       
Query: 191 atcatcgagctcgagaaggcccgccaatggaaggggctggagctcatcccgtcggagaac 250
           || || ||||  ||||| ||  | ||||||||||| || || || || || || ||||||
Sbjct: 289 attattgagcatgagaaagctagacaatggaagggacttgaacttattccatctgagaac 348

                                                             
Query: 251 ttcacctccctgtcggtgatgcaagccgtgggatccgtcatgacgaacaa 300
           ||||| ||  |||||||||||||||| || || || |||||||| |||||
Sbjct: 349 ttcacatctgtgtcggtgatgcaagctgttgggtctgtcatgactaacaa 398
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>gb|AY089107.1| Arabidopsis thaliana clone 33799 mRNA, complete sequence
          Length = 1725

 Score = 60.0 bits (30), Expect = 4e-06
 Identities = 135/170 (79%)
 Strand = Plus / Plus

                                                                       
Query: 131 gtcacctggccgaagcagctcaacgcgccgctggaggaggtcgacccggagattgccgac 190
           ||||| ||||| || ||||| ||||| ||  | |||||||| || || |||||||| |||
Sbjct: 194 gtcacttggccaaaacagcttaacgcacctttagaggaggttgatcctgagattgctgac 253

                                                                       
Query: 191 atcatcgagctcgagaaggcccgccaatggaaggggctggagctcatcccgtcggagaac 250
           || || ||||  ||||| ||  | ||||||||||| || || || || || || ||||||
Sbjct: 254 attattgagcatgagaaagctagacaatggaagggacttgaacttattccatctgagaac 313

                                                             
Query: 251 ttcacctccctgtcggtgatgcaagccgtgggatccgtcatgacgaacaa 300
           ||||| ||  |||||||||||||||| || || || |||||||| |||||
Sbjct: 314 ttcacatctgtgtcggtgatgcaagctgttgggtctgtcatgactaacaa 363
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>gb|AC120991.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBb0006J12, complete sequence
          Length = 157069

 Score = 56.0 bits (28), Expect = 7e-05
 Identities = 28/28 (100%)
 Strand = Plus / Minus

                                         
Query: 25    catggcgacggcgctccgcaagctctcc 52
             ||||||||||||||||||||||||||||
Sbjct: 74072 catggcgacggcgctccgcaagctctcc 74045
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 56.0 bits (28), Expect = 7e-05
 Identities = 28/28 (100%)
 Strand = Plus / Minus

                                            
Query: 25       catggcgacggcgctccgcaagctctcc 52
                ||||||||||||||||||||||||||||
Sbjct: 19473360 catggcgacggcgctccgcaagctctcc 19473333
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 56.0 bits (28), Expect = 7e-05
 Identities = 37/40 (92%)
 Strand = Plus / Minus

                                                        
Query: 97       ggcgtccctgccggcgacggaggagagatccgcagtcacc 136
                ||||| ||||||||||| |||||||||||||| |||||||
Sbjct: 26702781 ggcgtgcctgccggcgatggaggagagatccggagtcacc 26702742



 Score = 48.1 bits (24), Expect = 0.016
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                                
Query: 55       ccgcggccagcccctctcccgcctcacgccgc 86
                |||| |||||||||||||||||||||| ||||
Sbjct: 28239947 ccgcagccagcccctctcccgcctcaccccgc 28239916
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>dbj|AP003294.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0694A04
          Length = 141476

 Score = 56.0 bits (28), Expect = 7e-05
 Identities = 37/40 (92%)
 Strand = Plus / Minus

                                                     
Query: 97    ggcgtccctgccggcgacggaggagagatccgcagtcacc 136
             ||||| ||||||||||| |||||||||||||| |||||||
Sbjct: 49873 ggcgtgcctgccggcgatggaggagagatccggagtcacc 49834
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 30/31 (96%)
 Strand = Plus / Minus

                                              
Query: 21      tggccatggcgacggcgctccgcaagctctc 51
               ||||||| |||||||||||||||||||||||
Sbjct: 7238732 tggccatcgcgacggcgctccgcaagctctc 7238702



 Score = 50.1 bits (25), Expect = 0.004
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                             
Query: 230      gagctcatcccgtcggagaacttcacctc 258
                ||||||||| |||||||||||||||||||
Sbjct: 12440571 gagctcatcgcgtcggagaacttcacctc 12440543
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 30/31 (96%)
 Strand = Plus / Minus

                                              
Query: 21      tggccatggcgacggcgctccgcaagctctc 51
               ||||||| |||||||||||||||||||||||
Sbjct: 7238611 tggccatcgcgacggcgctccgcaagctctc 7238581



 Score = 50.1 bits (25), Expect = 0.004
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                             
Query: 230      gagctcatcccgtcggagaacttcacctc 258
                ||||||||| |||||||||||||||||||
Sbjct: 12394941 gagctcatcgcgtcggagaacttcacctc 12394913
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>emb|AL954160.5|CNS08CCY Oryza sativa chromosome 12, . BAC OSJNBb0078J08 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 121243

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 30/31 (96%)
 Strand = Plus / Plus

                                            
Query: 21    tggccatggcgacggcgctccgcaagctctc 51
             ||||||| |||||||||||||||||||||||
Sbjct: 17374 tggccatcgcgacggcgctccgcaagctctc 17404
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>emb|AL831806.5|CNS08CAJ Oryza sativa chromosome 12, . BAC OSJNBb0106P21 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 141427

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 30/31 (96%)
 Strand = Plus / Minus

                                            
Query: 21    tggccatggcgacggcgctccgcaagctctc 51
             ||||||| |||||||||||||||||||||||
Sbjct: 95045 tggccatcgcgacggcgctccgcaagctctc 95015
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>dbj|AK101088.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033024L02, full
           insert sequence
          Length = 1944

 Score = 50.1 bits (25), Expect = 0.004
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                        
Query: 230 gagctcatcccgtcggagaacttcacctc 258
           ||||||||| |||||||||||||||||||
Sbjct: 381 gagctcatcgcgtcggagaacttcacctc 409
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>emb|AL713942.4|CNS07YPB Oryza sativa chromosome 12, . BAC OSJNBa0009F05 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 163702

 Score = 50.1 bits (25), Expect = 0.004
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                           
Query: 230    gagctcatcccgtcggagaacttcacctc 258
              ||||||||| |||||||||||||||||||
Sbjct: 154936 gagctcatcgcgtcggagaacttcacctc 154908
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>emb|AL954826.3|CNS08CD2 Oryza sativa chromosome 12, . BAC OSJNBb0080P14 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 132241

 Score = 50.1 bits (25), Expect = 0.004
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                          
Query: 230   gagctcatcccgtcggagaacttcacctc 258
             ||||||||| |||||||||||||||||||
Sbjct: 42049 gagctcatcgcgtcggagaacttcacctc 42021
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>emb|AL161592.2|ATCHRIV88 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 88
          Length = 198493

 Score = 48.1 bits (24), Expect = 0.016
 Identities = 48/56 (85%)
 Strand = Plus / Minus

                                                                      
Query: 245    gagaacttcacctccctgtcggtgatgcaagccgtgggatccgtcatgacgaacaa 300
              ||||||||||| ||  |||||||||||||||| || || || |||||||| |||||
Sbjct: 136557 gagaacttcacatctgtgtcggtgatgcaagctgttgggtctgtcatgactaacaa 136502
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>emb|AL035538.1|ATF20D10 Arabidopsis thaliana DNA chromosome 4, BAC clone  F20D10 (ESSA project)
          Length = 147215

 Score = 48.1 bits (24), Expect = 0.016
 Identities = 48/56 (85%)
 Strand = Plus / Minus

                                                                     
Query: 245   gagaacttcacctccctgtcggtgatgcaagccgtgggatccgtcatgacgaacaa 300
             ||||||||||| ||  |||||||||||||||| || || || |||||||| |||||
Sbjct: 22142 gagaacttcacatctgtgtcggtgatgcaagctgttgggtctgtcatgactaacaa 22087
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score = 48.1 bits (24), Expect = 0.016
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                       
Query: 97      ggcgtccctgccggcgacggaggagagatccgcagtcacc 136
               ||||| ||||||||||| ||| |||||||||| |||||||
Sbjct: 2199155 ggcgtgcctgccggcgatggaagagagatccggagtcacc 2199116



 Score = 44.1 bits (22), Expect = 0.26
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 31      gacggcgctccgcaagctctcc 52
               ||||||||||||||||||||||
Sbjct: 9469716 gacggcgctccgcaagctctcc 9469695



 Score = 44.1 bits (22), Expect = 0.26
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 31      gacggcgctccgcaagctctcc 52
               ||||||||||||||||||||||
Sbjct: 1316599 gacggcgctccgcaagctctcc 1316578
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>dbj|AP003452.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0478H03
          Length = 167560

 Score = 48.1 bits (24), Expect = 0.016
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                             
Query: 55    ccgcggccagcccctctcccgcctcacgccgc 86
             |||| |||||||||||||||||||||| ||||
Sbjct: 74454 ccgcagccagcccctctcccgcctcaccccgc 74423
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>dbj|AP003347.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0445E10
          Length = 145912

 Score = 48.1 bits (24), Expect = 0.016
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                              
Query: 55     ccgcggccagcccctctcccgcctcacgccgc 86
              |||| |||||||||||||||||||||| ||||
Sbjct: 123941 ccgcagccagcccctctcccgcctcaccccgc 123910
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>dbj|AP003876.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1119_D01
          Length = 97862

 Score = 48.1 bits (24), Expect = 0.016
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                     
Query: 97    ggcgtccctgccggcgacggaggagagatccgcagtcacc 136
             ||||| ||||||||||| ||| |||||||||| |||||||
Sbjct: 77417 ggcgtgcctgccggcgatggaagagagatccggagtcacc 77378
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>dbj|AK110519.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-167-H01,
          full insert sequence
          Length = 1415

 Score = 48.1 bits (24), Expect = 0.016
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                          
Query: 55 ccgcggccagcccctctcccgcctcacgccgc 86
          |||| |||||||||||||||||||||| ||||
Sbjct: 83 ccgcagccagcccctctcccgcctcaccccgc 52
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>gb|DQ139269.1| Medicago truncatula serine hydroxymethyltransferase mRNA, complete
           cds
          Length = 1524

 Score = 46.1 bits (23), Expect = 0.065
 Identities = 68/83 (81%)
 Strand = Plus / Plus

                                                                       
Query: 215 caatggaaggggctggagctcatcccgtcggagaacttcacctccctgtcggtgatgcaa 274
           |||||||||||||| ||||| || || || || || || || ||  ||||||||||||||
Sbjct: 187 caatggaaggggctagagcttataccatcagaaaattttacgtcgttgtcggtgatgcaa 246

                                  
Query: 275 gccgtgggatccgtcatgacgaa 297
           || || ||||| || ||||||||
Sbjct: 247 gcggttggatcggttatgacgaa 269
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>gb|AC137752.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0041C22, complete sequence
          Length = 161172

 Score = 44.1 bits (22), Expect = 0.26
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                           
Query: 230   gagctcatcccgtcggagaacttcacctcc 259
             ||||||||| | ||||||||||||||||||
Sbjct: 84026 gagctcatcgcctcggagaacttcacctcc 84055
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 44.1 bits (22), Expect = 0.26
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                              
Query: 230      gagctcatcccgtcggagaacttcacctcc 259
                ||||||||| | ||||||||||||||||||
Sbjct: 14860959 gagctcatcgcctcggagaacttcacctcc 14860988
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 44.1 bits (22), Expect = 0.26
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 31      gacggcgctccgcaagctctcc 52
               ||||||||||||||||||||||
Sbjct: 9870462 gacggcgctccgcaagctctcc 9870441
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>dbj|AP004155.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1112_D12
          Length = 97572

 Score = 44.1 bits (22), Expect = 0.26
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 31    gacggcgctccgcaagctctcc 52
             ||||||||||||||||||||||
Sbjct: 94307 gacggcgctccgcaagctctcc 94286
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>dbj|AP005730.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OSJNBa0073J19
          Length = 165174

 Score = 44.1 bits (22), Expect = 0.26
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 31     gacggcgctccgcaagctctcc 52
              ||||||||||||||||||||||
Sbjct: 145906 gacggcgctccgcaagctctcc 145885
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>dbj|AP005822.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0456E06
          Length = 164353

 Score = 44.1 bits (22), Expect = 0.26
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 31     gacggcgctccgcaagctctcc 52
              ||||||||||||||||||||||
Sbjct: 160704 gacggcgctccgcaagctctcc 160683
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>dbj|AP005695.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0063H02
          Length = 152326

 Score = 44.1 bits (22), Expect = 0.26
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 31    gacggcgctccgcaagctctcc 52
             ||||||||||||||||||||||
Sbjct: 67097 gacggcgctccgcaagctctcc 67076
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>dbj|AP004254.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
            clone:OJ1126_D10
          Length = 90631

 Score = 44.1 bits (22), Expect = 0.26
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 31   gacggcgctccgcaagctctcc 52
            ||||||||||||||||||||||
Sbjct: 8956 gacggcgctccgcaagctctcc 8935
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>dbj|AK105624.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-200-C10, full
           insert sequence
          Length = 1811

 Score = 44.1 bits (22), Expect = 0.26
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 230 gagctcatcccgtcggagaacttcacctcc 259
           ||||||||| | ||||||||||||||||||
Sbjct: 183 gagctcatcgcctcggagaacttcacctcc 212
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>dbj|AK101450.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033039N02, full
           insert sequence
          Length = 1896

 Score = 44.1 bits (22), Expect = 0.26
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 230 gagctcatcccgtcggagaacttcacctcc 259
           ||||||||| | ||||||||||||||||||
Sbjct: 184 gagctcatcgcctcggagaacttcacctcc 213
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>dbj|AK071541.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023100I04, full
           insert sequence
          Length = 1811

 Score = 44.1 bits (22), Expect = 0.26
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 230 gagctcatcccgtcggagaacttcacctcc 259
           ||||||||| | ||||||||||||||||||
Sbjct: 184 gagctcatcgcctcggagaacttcacctcc 213
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>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence
          Length = 2648638

 Score = 44.1 bits (22), Expect = 0.26
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                             
Query: 57      gcggccagcccctctcccgcctcacgccgc 86
               |||||||||||||| |||||| ||||||||
Sbjct: 1468996 gcggccagcccctcccccgccccacgccgc 1469025
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 44.1 bits (22), Expect = 0.26
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                              
Query: 230      gagctcatcccgtcggagaacttcacctcc 259
                ||||||||| | ||||||||||||||||||
Sbjct: 14940927 gagctcatcgcctcggagaacttcacctcc 14940956
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>ref|XM_503153.1| Yarrowia lipolytica CLIB122, YALI0D22484g predicted mRNA
          Length = 1446

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 57/69 (82%)
 Strand = Plus / Plus

                                                                       
Query: 236 atcccgtcggagaacttcacctccctgtcggtgatgcaagccgtgggatccgtcatgacg 295
           ||||||||||| ||||||||||| | | | || ||| | ||| |||| |||||||||  |
Sbjct: 175 atcccgtcggaaaacttcacctcgcaggccgtcatgaacgccctgggctccgtcatgcag 234

                    
Query: 296 aacaagtac 304
           |||||||||
Sbjct: 235 aacaagtac 243
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>gb|AF442558.1| Chlamydomonas reinhardtii serine hydroxymethyltransferase (shmt)
           mRNA, complete cds; nuclear gene for mitochondrial
           product
          Length = 2025

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                            
Query: 221 aaggggctggagctcatcccgtcggagaacttc 253
           ||||| |||||||| ||||| ||||||||||||
Sbjct: 254 aagggcctggagctgatcccctcggagaacttc 286
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>gb|CP000240.1| Synechococcus sp. JA-2-3B'a(2-13), complete genome
          Length = 3046682

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 181     gattgccgacatcatcgagct 201
               |||||||||||||||||||||
Sbjct: 2021081 gattgccgacatcatcgagct 2021061
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>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 151     caacgcgccgctggaggaggt 171
               |||||||||||||||||||||
Sbjct: 1128134 caacgcgccgctggaggaggt 1128154
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>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 41      cgcaagctctccgcccgcggc 61
               |||||||||||||||||||||
Sbjct: 1445067 cgcaagctctccgcccgcggc 1445047
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>emb|CR962125.2| Medicago truncatula chromosome 5 clone mth2-179a9, COMPLETE SEQUENCE
          Length = 113972

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                  
Query: 261   tgtcggtgatgcaagccgtgggatccgtcatgacgaa 297
             |||||||||||||||| || ||||| || ||||||||
Sbjct: 15238 tgtcggtgatgcaagcggttggatcggttatgacgaa 15274
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>emb|CR382130.1| Yarrowia lipolytica chromosome D of strain CLIB122 of Yarrowia lipolytica
          Length = 3633272

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 57/69 (82%)
 Strand = Plus / Plus

                                                                           
Query: 236     atcccgtcggagaacttcacctccctgtcggtgatgcaagccgtgggatccgtcatgacg 295
               ||||||||||| ||||||||||| | | | || ||| | ||| |||| |||||||||  |
Sbjct: 2873281 atcccgtcggaaaacttcacctcgcaggccgtcatgaacgccctgggctccgtcatgcag 2873340

                        
Query: 296     aacaagtac 304
               |||||||||
Sbjct: 2873341 aacaagtac 2873349
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>dbj|AP004579.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT11E23, TM0557
          Length = 87695

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 66/81 (81%)
 Strand = Plus / Plus

                                                                        
Query: 220  gaaggggctggagctcatcccgtcggagaacttcacctccctgtcggtgatgcaagccgt 279
            ||||||||||||||| || || || ||||| ||||| || || || || |||||||| ||
Sbjct: 3540 gaaggggctggagctgataccctcagagaatttcacttctctctctgtaatgcaagctgt 3599

                                 
Query: 280  gggatccgtcatgacgaacaa 300
             || || |||||||| |||||
Sbjct: 3600 tggctctgtcatgacaaacaa 3620
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>dbj|AP004578.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT17H01, TM0541,
             complete sequence
          Length = 110985

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 66/81 (81%)
 Strand = Plus / Plus

                                                                         
Query: 220   gaaggggctggagctcatcccgtcggagaacttcacctccctgtcggtgatgcaagccgt 279
             ||||||||||||||| || || || ||||| ||||| || || || || |||||||| ||
Sbjct: 91143 gaaggggctggagctgataccctcagagaatttcacttctctctctgtaatgcaagctgt 91202

                                  
Query: 280   gggatccgtcatgacgaacaa 300
              || || |||||||| |||||
Sbjct: 91203 tggctctgtcatgacaaacaa 91223
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>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome
          Length = 2584158

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 166     ggaggtcgacccggagattgccga 189
               |||||||||||||||||| |||||
Sbjct: 1921123 ggaggtcgacccggagatcgccga 1921100
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>ref|XM_848436.1| PREDICTED: Canis familiaris similar to junctophilin 2 isoform 1
            (LOC610874), mRNA
          Length = 1801

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 97   ggcgtccctgccggcgacgg 116
            ||||||||||||||||||||
Sbjct: 1236 ggcgtccctgccggcgacgg 1217
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>gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete genome
          Length = 3570858

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 230     gagctcatcccgtcggagaacttc 253
               ||||||||| ||||||||||||||
Sbjct: 1295505 gagctcatcgcgtcggagaacttc 1295482
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                            
Query: 25       catggcgacggcgctccgcaagctctcc 52
                ||||||||||| |||| |||||||||||
Sbjct: 32282703 catggcgacggtgctctgcaagctctcc 32282730
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>dbj|AP004817.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0539D10
          Length = 158691

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 25     catggcgacggcgctccgcaagctctcc 52
              ||||||||||| |||| |||||||||||
Sbjct: 126716 catggcgacggtgctctgcaagctctcc 126743
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>dbj|AP005287.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1004_A11
          Length = 132352

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 25    catggcgacggcgctccgcaagctctcc 52
             ||||||||||| |||| |||||||||||
Sbjct: 58535 catggcgacggtgctctgcaagctctcc 58562
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>gb|AC154667.2| Mus musculus BAC clone RP23-153F8 from 16, complete sequence
          Length = 195017

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 245   gagaacttcacctccctgtc 264
             ||||||||||||||||||||
Sbjct: 61233 gagaacttcacctccctgtc 61252
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>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome
          Length = 3566135

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 162     tggaggaggtcgacccggag 181
               ||||||||||||||||||||
Sbjct: 2278296 tggaggaggtcgacccggag 2278277


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,661,449
Number of Sequences: 3902068
Number of extensions: 1661449
Number of successful extensions: 39917
Number of sequences better than 10.0: 72
Number of HSP's better than 10.0 without gapping: 73
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 39102
Number of HSP's gapped (non-prelim): 815
length of query: 304
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 282
effective length of database: 17,147,199,772
effective search space: 4835510335704
effective search space used: 4835510335704
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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