ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal22f09
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ref|XM_465260.1| Oryza sativa (japonica cultivar-group), mRNA 412 e-112
2gb|AY104587.1| Zea mays PCO104634 mRNA sequence 311 1e-81
3dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 250 4e-63
4dbj|AP004024.3| Oryza sativa (japonica cultivar-group) genomic D... 250 4e-63
5dbj|AP004798.2| Oryza sativa (japonica cultivar-group) genomic D... 250 4e-63
6ref|NM_124867.2| Arabidopsis thaliana unknown protein AT5G54855 ... 117 4e-23
7gb|AY093718.1| Arabidopsis thaliana AT1g27100/T7N9_16 mRNA, comp... 117 4e-23
8gb|AF410270.1|AF410270 Arabidopsis thaliana unknown protein mRNA... 117 4e-23
9dbj|AK118946.1| Arabidopsis thaliana At5g54855 mRNA for unknown ... 117 4e-23
10dbj|AB005232.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 113 6e-22
11gb|AY088675.1| Arabidopsis thaliana clone 9159 mRNA, complete se... 109 1e-20
12emb|BX830033.1|CNS0A053 Arabidopsis thaliana Full-length cDNA Co... 84 6e-13
13gb|AY364845.1| Virus PhiCh1 pBgB51 capsid protein, int1, and cap... 42 2.0
14gb|AY364843.1| Virus PhiCh1 pBgB5 ORF34-5, integrase, and ORF36-... 42 2.0
15gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 42 2.0
16gb|AF440695.1| Virus PhiCh1, complete genome 42 2.0
17dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.0
18gb|AC134230.2| Oryza sativa (japonica cultivar-group) chromosome... 42 2.0
19gb|AY661566.1| Saccharopolyspora erythraea polyketide synthase g... 40 7.8
20gb|AC114420.11| Mus musculus chromosome 5, clone RP23-375E13, co... 40 7.8
21gb|DQ149987.1| Streptomyces neyagawaensis concanamycin A biosynt... 40 7.8
22emb|CR674137.2|CNS0FJ4V Tetraodon nigroviridis full-length cDNA 40 7.8
23emb|Z82188.2|HS151B14 Human DNA sequence from clone RP1-151B14 o... 40 7.8
24emb|AL161729.27| Human DNA sequence from clone RP11-435O5 on chr... 40 7.8
25gb|BC023640.1| Homo sapiens, clone IMAGE:4890344, mRNA 40 7.8
26emb|AL939109.1|SCO939109 Streptomyces coelicolor A3(2) complete ... 40 7.8
27emb|AL939108.1|SCO939108 Streptomyces coelicolor A3(2) complete ... 40 7.8
28gb|AC099506.3| Homo sapiens chromosome 16 clone RP11-22H5, compl... 40 7.8
29gb|AE012496.1| Xanthomonas campestris pv. campestris str. ATCC 3... 40 7.8
30gb|AC116665.1| Papio hamadryas chromosome , clone RP41-119J13, c... 40 7.8
31gb|AF196488.2|AF196488 Mycobacterium smegmatis hypothetical prot... 40 7.8
32gb|CP000249.1| Frankia sp. CcI3, complete genome 40 7.8
33gb|AC135209.2| Oryza sativa (japonica cultivar-group) chromosome... 40 7.8
34gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, ... 40 7.8
35gb|AC120182.8| Mus musculus chromosome 1, clone RP24-501C2, comp... 40 7.8
36dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 40 7.8
37gb|AF031418.3| Pseudomonas putida FliK (fliK), FliL, FliM (fliM)... 40 7.8
38dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ... 40 7.8
39gb|AC008572.6|AC008572 Homo sapiens chromosome 5 clone CTC-551A1... 40 7.8
40gb|AC093475.9| Mus musculus chromosome 1, clone RP23-54K22, comp... 40 7.8
41gb|M63676.1|SERERYAA Saccharopolyspora erythraea EryA (eryA) gen... 40 7.8

>ref|XM_465260.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 468

 Score =  412 bits (208), Expect = e-112
 Identities = 340/384 (88%)
 Strand = Plus / Plus

                                                                       
Query: 127 ctcgctttcctgctggccgcggccccggcggccgaggcttggacgggggagatccgcggc 186
           ||||| || |||||||  |||||||||||||||||||| |||||||||||||||||||||
Sbjct: 64  ctcgccttgctgctggtagcggccccggcggccgaggcgtggacgggggagatccgcggc 123

                                                                       
Query: 187 cgcgtcgtctgcgacgtctgcgcggactctgccatcggccccgaggaccacgtcctcgaa 246
           | |||||||||||||||||||| |||| | ||||||||||||||||||||||||||||||
Sbjct: 124 cacgtcgtctgcgacgtctgcggggacgccgccatcggccccgaggaccacgtcctcgaa 183

                                                                       
Query: 247 ggcgctgaggttgctgttctgtgcatcacgaaatctggtgaggtcatcaactaccaggcg 306
           || || |||||||| || || |||||||||| ||||||||| || |||||||||||||| 
Sbjct: 184 ggtgccgaggttgccgtcctctgcatcacgagatctggtgaagttatcaactaccaggcc 243

                                                                       
Query: 307 ttcacaaactacaagggtgtctacagcgttgcagagacaatgcctgagagcgaccgatgg 366
           |||||||||| ||||||||||||||  ||||| ||||| ||||| ||||| ||||| |||
Sbjct: 244 ttcacaaactccaagggtgtctacattgttgcggagacgatgccagagagtgaccgttgg 303

                                                                       
Query: 367 gattcgtgcctggcgaggcccatcagcagcttccaccagcattgcaccaggaggggcgat 426
           || || ||| |||| ||||||||||||||||| |||||||||||||| | |||||| |||
Sbjct: 304 gagtcatgcttggcaaggcccatcagcagctttcaccagcattgcactaagaggggtgat 363

                                                                       
Query: 427 gcacactctggggtcaagttcacatacaacaaacagtcggggagctcgcacaacgtcaag 486
            ||||||||||||||||||||||||||| ||| |  || || | ||| |||| |||||||
Sbjct: 364 acacactctggggtcaagttcacatacagcaagccttcaggaaactctcacaccgtcaag 423

                                   
Query: 487 acgttcctctacaagcctgccaac 510
           ||||||||||||||||||||||||
Sbjct: 424 acgttcctctacaagcctgccaac 447



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>gb|AY104587.1| Zea mays PCO104634 mRNA sequence
          Length = 903

 Score =  311 bits (157), Expect = 1e-81
 Identities = 307/357 (85%)
 Strand = Plus / Plus

                                                                       
Query: 152 cggcggccgaggcttggacgggggagatccgcggccgcgtcgtctgcgacgtctgcgcgg 211
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |
Sbjct: 243 cggcggccgaggcttggacgggggagatccgcggccgcgtcgtctgcgacgtctgcggcg 302

                                                                       
Query: 212 actctgccatcggccccgaggaccacgtcctcgaaggcgctgaggttgctgttctgtgca 271
           || | ||||||||||| |||||||||| ||||||||| || ||||||||||| || ||||
Sbjct: 303 acgcagccatcggcccggaggaccacgccctcgaaggtgcggaggttgctgtcctctgca 362

                                                                       
Query: 272 tcacgaaatctggtgaggtcatcaactaccaggcgttcacaaactacaagggtgtctaca 331
           |||| |||||||||||||| |||||||| || || |||||||||| |||||| || || |
Sbjct: 363 tcacaaaatctggtgaggttatcaactatcaagccttcacaaactccaagggcgtgtata 422

                                                                       
Query: 332 gcgttgcagagacaatgcctgagagcgaccgatgggattcgtgcctggcgaggcccatca 391
             || || ||||| ||||| ||||||||| | ||||| |||||| |||||||||| || |
Sbjct: 423 ctgtcgccgagactatgccggagagcgacaggtgggactcgtgcttggcgaggcctatga 482

                                                                       
Query: 392 gcagcttccaccagcattgcaccaggaggggcgatgcacactctggggtcaagttcacat 451
           |||||||||| |  ||||||||  || |||| ||||| ||||||||||| |||||||| |
Sbjct: 483 gcagcttccatctacattgcacacggcggggtgatgctcactctggggtgaagttcactt 542

                                                                    
Query: 452 acaacaaacagtcggggagctcgcacaacgtcaagacgttcctctacaagcctgcca 508
           ||||||||  ||| |||| | |||||| ||||||| | |||||||||||||| ||||
Sbjct: 543 acaacaaatcgtctgggaacccgcacaccgtcaagcctttcctctacaagccggcca 599



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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  250 bits (126), Expect = 4e-63
 Identities = 225/258 (87%)
 Strand = Plus / Minus

                                                                            
Query: 253      gaggttgctgttctgtgcatcacgaaatctggtgaggtcatcaactaccaggcgttcaca 312
                |||||||| || || |||||||||| ||||||||| || |||||||||||||| ||||||
Sbjct: 12629680 gaggttgccgtcctctgcatcacgagatctggtgaagttatcaactaccaggccttcaca 12629621

                                                                            
Query: 313      aactacaagggtgtctacagcgttgcagagacaatgcctgagagcgaccgatgggattcg 372
                |||| ||||||||||||||  ||||| ||||| ||||| ||||| ||||| ||||| || 
Sbjct: 12629620 aactccaagggtgtctacattgttgcggagacgatgccagagagtgaccgttgggagtca 12629561

                                                                            
Query: 373      tgcctggcgaggcccatcagcagcttccaccagcattgcaccaggaggggcgatgcacac 432
                ||| |||| ||||||||||||||||| |||||||||||||| | |||||| ||| |||||
Sbjct: 12629560 tgcttggcaaggcccatcagcagctttcaccagcattgcactaagaggggtgatacacac 12629501

                                                                            
Query: 433      tctggggtcaagttcacatacaacaaacagtcggggagctcgcacaacgtcaagacgttc 492
                |||||||||||||||||||||| ||| |  || || | ||| |||| |||||||||||||
Sbjct: 12629500 tctggggtcaagttcacatacagcaagccttcaggaaactctcacaccgtcaagacgttc 12629441

                                  
Query: 493      ctctacaagcctgccaac 510
                ||||||||||||||||||
Sbjct: 12629440 ctctacaagcctgccaac 12629423



 Score =  170 bits (86), Expect = 3e-39
 Identities = 113/122 (92%)
 Strand = Plus / Minus

                                                                            
Query: 127      ctcgctttcctgctggccgcggccccggcggccgaggcttggacgggggagatccgcggc 186
                ||||| || |||||||  |||||||||||||||||||| |||||||||||||||||||||
Sbjct: 12632467 ctcgccttgctgctggtagcggccccggcggccgaggcgtggacgggggagatccgcggc 12632408

                                                                            
Query: 187      cgcgtcgtctgcgacgtctgcgcggactctgccatcggccccgaggaccacgtcctcgaa 246
                | |||||||||||||||||||| |||| | ||||||||||||||||||||||||||||||
Sbjct: 12632407 cacgtcgtctgcgacgtctgcggggacgccgccatcggccccgaggaccacgtcctcgaa 12632348

                  
Query: 247      gg 248
                ||
Sbjct: 12632347 gg 12632346



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>dbj|AP004024.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1134_B09
          Length = 105247

 Score =  250 bits (126), Expect = 4e-63
 Identities = 225/258 (87%)
 Strand = Plus / Minus

                                                                         
Query: 253   gaggttgctgttctgtgcatcacgaaatctggtgaggtcatcaactaccaggcgttcaca 312
             |||||||| || || |||||||||| ||||||||| || |||||||||||||| ||||||
Sbjct: 26739 gaggttgccgtcctctgcatcacgagatctggtgaagttatcaactaccaggccttcaca 26680

                                                                         
Query: 313   aactacaagggtgtctacagcgttgcagagacaatgcctgagagcgaccgatgggattcg 372
             |||| ||||||||||||||  ||||| ||||| ||||| ||||| ||||| ||||| || 
Sbjct: 26679 aactccaagggtgtctacattgttgcggagacgatgccagagagtgaccgttgggagtca 26620

                                                                         
Query: 373   tgcctggcgaggcccatcagcagcttccaccagcattgcaccaggaggggcgatgcacac 432
             ||| |||| ||||||||||||||||| |||||||||||||| | |||||| ||| |||||
Sbjct: 26619 tgcttggcaaggcccatcagcagctttcaccagcattgcactaagaggggtgatacacac 26560

                                                                         
Query: 433   tctggggtcaagttcacatacaacaaacagtcggggagctcgcacaacgtcaagacgttc 492
             |||||||||||||||||||||| ||| |  || || | ||| |||| |||||||||||||
Sbjct: 26559 tctggggtcaagttcacatacagcaagccttcaggaaactctcacaccgtcaagacgttc 26500

                               
Query: 493   ctctacaagcctgccaac 510
             ||||||||||||||||||
Sbjct: 26499 ctctacaagcctgccaac 26482



 Score =  170 bits (86), Expect = 3e-39
 Identities = 113/122 (92%)
 Strand = Plus / Minus

                                                                         
Query: 127   ctcgctttcctgctggccgcggccccggcggccgaggcttggacgggggagatccgcggc 186
             ||||| || |||||||  |||||||||||||||||||| |||||||||||||||||||||
Sbjct: 29526 ctcgccttgctgctggtagcggccccggcggccgaggcgtggacgggggagatccgcggc 29467

                                                                         
Query: 187   cgcgtcgtctgcgacgtctgcgcggactctgccatcggccccgaggaccacgtcctcgaa 246
             | |||||||||||||||||||| |||| | ||||||||||||||||||||||||||||||
Sbjct: 29466 cacgtcgtctgcgacgtctgcggggacgccgccatcggccccgaggaccacgtcctcgaa 29407

               
Query: 247   gg 248
             ||
Sbjct: 29406 gg 29405



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>dbj|AP004798.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0572D06
          Length = 148920

 Score =  250 bits (126), Expect = 4e-63
 Identities = 225/258 (87%)
 Strand = Plus / Minus

                                                                          
Query: 253    gaggttgctgttctgtgcatcacgaaatctggtgaggtcatcaactaccaggcgttcaca 312
              |||||||| || || |||||||||| ||||||||| || |||||||||||||| ||||||
Sbjct: 134213 gaggttgccgtcctctgcatcacgagatctggtgaagttatcaactaccaggccttcaca 134154

                                                                          
Query: 313    aactacaagggtgtctacagcgttgcagagacaatgcctgagagcgaccgatgggattcg 372
              |||| ||||||||||||||  ||||| ||||| ||||| ||||| ||||| ||||| || 
Sbjct: 134153 aactccaagggtgtctacattgttgcggagacgatgccagagagtgaccgttgggagtca 134094

                                                                          
Query: 373    tgcctggcgaggcccatcagcagcttccaccagcattgcaccaggaggggcgatgcacac 432
              ||| |||| ||||||||||||||||| |||||||||||||| | |||||| ||| |||||
Sbjct: 134093 tgcttggcaaggcccatcagcagctttcaccagcattgcactaagaggggtgatacacac 134034

                                                                          
Query: 433    tctggggtcaagttcacatacaacaaacagtcggggagctcgcacaacgtcaagacgttc 492
              |||||||||||||||||||||| ||| |  || || | ||| |||| |||||||||||||
Sbjct: 134033 tctggggtcaagttcacatacagcaagccttcaggaaactctcacaccgtcaagacgttc 133974

                                
Query: 493    ctctacaagcctgccaac 510
              ||||||||||||||||||
Sbjct: 133973 ctctacaagcctgccaac 133956



 Score =  170 bits (86), Expect = 3e-39
 Identities = 113/122 (92%)
 Strand = Plus / Minus

                                                                          
Query: 127    ctcgctttcctgctggccgcggccccggcggccgaggcttggacgggggagatccgcggc 186
              ||||| || |||||||  |||||||||||||||||||| |||||||||||||||||||||
Sbjct: 137000 ctcgccttgctgctggtagcggccccggcggccgaggcgtggacgggggagatccgcggc 136941

                                                                          
Query: 187    cgcgtcgtctgcgacgtctgcgcggactctgccatcggccccgaggaccacgtcctcgaa 246
              | |||||||||||||||||||| |||| | ||||||||||||||||||||||||||||||
Sbjct: 136940 cacgtcgtctgcgacgtctgcggggacgccgccatcggccccgaggaccacgtcctcgaa 136881

                
Query: 247    gg 248
              ||
Sbjct: 136880 gg 136879



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>ref|NM_124867.2| Arabidopsis thaliana unknown protein AT5G54855 mRNA, complete cds
          Length = 679

 Score =  117 bits (59), Expect = 4e-23
 Identities = 134/159 (84%)
 Strand = Plus / Plus

                                                                       
Query: 244 gaaggcgctgaggttgctgttctgtgcatcacgaaatctggtgaggtcatcaactaccag 303
           ||||| ||||||||||| ||||||||||| || |||||||| || ||  | |||||||| 
Sbjct: 259 gaaggagctgaggttgcggttctgtgcataaccaaatctggagaagttgtgaactaccaa 318

                                                                       
Query: 304 gcgttcacaaactacaagggtgtctacagcgttgcagagacaatgcctgagagcgaccga 363
           || ||||||||||  || ||||||||||  ||||||||||||||||| |||||||| || 
Sbjct: 319 gctttcacaaactcaaaaggtgtctacacagttgcagagacaatgccagagagcgaacgt 378

                                                  
Query: 364 tgggattcgtgcctggcgaggcccatcagcagcttccac 402
           |||||  | ||||| || || ||||||||||||||||||
Sbjct: 379 tgggacgcttgccttgcaagacccatcagcagcttccac 417



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>gb|AY093718.1| Arabidopsis thaliana AT1g27100/T7N9_16 mRNA, complete cds
          Length = 441

 Score =  117 bits (59), Expect = 4e-23
 Identities = 134/159 (84%)
 Strand = Plus / Plus

                                                                       
Query: 244 gaaggcgctgaggttgctgttctgtgcatcacgaaatctggtgaggtcatcaactaccag 303
           ||||| ||||||||||| ||||||||||| || |||||||| || ||  | |||||||| 
Sbjct: 157 gaaggagctgaggttgcggttctgtgcataaccaaatctggagaagttgtgaactaccaa 216

                                                                       
Query: 304 gcgttcacaaactacaagggtgtctacagcgttgcagagacaatgcctgagagcgaccga 363
           || ||||||||||  || ||||||||||  ||||||||||||||||| |||||||| || 
Sbjct: 217 gctttcacaaactcaaaaggtgtctacacagttgcagagacaatgccagagagcgaacgt 276

                                                  
Query: 364 tgggattcgtgcctggcgaggcccatcagcagcttccac 402
           |||||  | ||||| || || ||||||||||||||||||
Sbjct: 277 tgggacgcttgccttgcaagacccatcagcagcttccac 315



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>gb|AF410270.1|AF410270 Arabidopsis thaliana unknown protein mRNA, complete cds
          Length = 636

 Score =  117 bits (59), Expect = 4e-23
 Identities = 134/159 (84%)
 Strand = Plus / Plus

                                                                       
Query: 244 gaaggcgctgaggttgctgttctgtgcatcacgaaatctggtgaggtcatcaactaccag 303
           ||||| ||||||||||| ||||||||||| || |||||||| || ||  | |||||||| 
Sbjct: 216 gaaggagctgaggttgcggttctgtgcataaccaaatctggagaagttgtgaactaccaa 275

                                                                       
Query: 304 gcgttcacaaactacaagggtgtctacagcgttgcagagacaatgcctgagagcgaccga 363
           || ||||||||||  || ||||||||||  ||||||||||||||||| |||||||| || 
Sbjct: 276 gctttcacaaactcaaaaggtgtctacacagttgcagagacaatgccagagagcgaacgt 335

                                                  
Query: 364 tgggattcgtgcctggcgaggcccatcagcagcttccac 402
           |||||  | ||||| || || ||||||||||||||||||
Sbjct: 336 tgggacgcttgccttgcaagacccatcagcagcttccac 374



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>dbj|AK118946.1| Arabidopsis thaliana At5g54855 mRNA for unknown protein, complete
           cds, clone: RAFL21-28-L11
          Length = 635

 Score =  117 bits (59), Expect = 4e-23
 Identities = 134/159 (84%)
 Strand = Plus / Plus

                                                                       
Query: 244 gaaggcgctgaggttgctgttctgtgcatcacgaaatctggtgaggtcatcaactaccag 303
           ||||| ||||||||||| ||||||||||| || |||||||| || ||  | |||||||| 
Sbjct: 229 gaaggagctgaggttgcggttctgtgcataaccaaatctggagaagttgtgaactaccaa 288

                                                                       
Query: 304 gcgttcacaaactacaagggtgtctacagcgttgcagagacaatgcctgagagcgaccga 363
           || ||||||||||  || ||||||||||  ||||||||||||||||| |||||||| || 
Sbjct: 289 gctttcacaaactcaaaaggtgtctacacagttgcagagacaatgccagagagcgaacgt 348

                                                  
Query: 364 tgggattcgtgcctggcgaggcccatcagcagcttccac 402
           |||||  | ||||| || || ||||||||||||||||||
Sbjct: 349 tgggacgcttgccttgcaagacccatcagcagcttccac 387



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>dbj|AB005232.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MBG8
          Length = 80315

 Score =  113 bits (57), Expect = 6e-22
 Identities = 129/153 (84%)
 Strand = Plus / Plus

                                                                         
Query: 250   gctgaggttgctgttctgtgcatcacgaaatctggtgaggtcatcaactaccaggcgttc 309
             ||||||||||| ||||||||||| || |||||||| || ||  | |||||||| || |||
Sbjct: 42976 gctgaggttgcggttctgtgcataaccaaatctggagaagttgtgaactaccaagctttc 43035

                                                                         
Query: 310   acaaactacaagggtgtctacagcgttgcagagacaatgcctgagagcgaccgatgggat 369
             |||||||  || ||||||||||  ||||||||||||||||| |||||||| || ||||| 
Sbjct: 43036 acaaactcaaaaggtgtctacacagttgcagagacaatgccagagagcgaacgttgggac 43095

                                              
Query: 370   tcgtgcctggcgaggcccatcagcagcttccac 402
              | ||||| || || ||||||||||||||||||
Sbjct: 43096 gcttgccttgcaagacccatcagcagcttccac 43128



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>gb|AY088675.1| Arabidopsis thaliana clone 9159 mRNA, complete sequence
          Length = 661

 Score =  109 bits (55), Expect = 1e-20
 Identities = 133/159 (83%)
 Strand = Plus / Plus

                                                                       
Query: 244 gaaggcgctgaggttgctgttctgtgcatcacgaaatctggtgaggtcatcaactaccag 303
           ||||| ||||||||||| ||||||||||| || |||||||| || ||  | |||||||| 
Sbjct: 259 gaaggagctgaggttgcggttctgtgcataaccaaatctggagaagttgtgaactaccaa 318

                                                                       
Query: 304 gcgttcacaaactacaagggtgtctacagcgttgcagagacaatgcctgagagcgaccga 363
           || ||||| ||||  || ||||||||||  ||||||||||||||||| |||||||| || 
Sbjct: 319 gctttcactaactcaaaaggtgtctacacagttgcagagacaatgccagagagcgaacgt 378

                                                  
Query: 364 tgggattcgtgcctggcgaggcccatcagcagcttccac 402
           |||||  | ||||| || || ||||||||||||||||||
Sbjct: 379 tgggacgcttgccttgcaagacccatcagcagcttccac 417



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>emb|BX830033.1|CNS0A053 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTFB54ZF04 of Flowers and buds of strain col-0 of
            Arabidopsis thaliana (thale cress)
          Length = 1507

 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 123/150 (82%)
 Strand = Plus / Plus

                                                                        
Query: 250  gctgaggttgctgttctgtgcatcacgaaatctggtgaggtcatcaactaccaggcgttc 309
            ||||||||||| ||||||||||| || |||||||| || ||  | |||||||| || || 
Sbjct: 1134 gctgaggttgcggttctgtgcataaccaaatctggagaagttgtgaactaccaagctttt 1193

                                                                        
Query: 310  acaaactacaagggtgtctacagcgttgcagagacaatgcctgagagcgaccgatgggat 369
            |||||||  || |||||||| |  ||||||||||||||||| |||||||| || ||||| 
Sbjct: 1194 acaaactcaaaaggtgtctaaacagttgcagagacaatgccagagagcgaacgttgggac 1253

                                          
Query: 370  tcgtgcctggcgaggcccatcagcagcttc 399
             | | ||| || || |||||||||||||||
Sbjct: 1254 gcttcccttgcaagacccatcagcagcttc 1283



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>gb|AY364845.1| Virus PhiCh1 pBgB51 capsid protein, int1, and capsid protein genes,
            complete cds
          Length = 5995

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 181  cgcggccgcgtcgtctgcgac 201
            |||||||||||||||||||||
Sbjct: 5722 cgcggccgcgtcgtctgcgac 5742



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>gb|AY364843.1| Virus PhiCh1 pBgB5 ORF34-5, integrase, and ORF36-5 genes, complete
            cds
          Length = 5995

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 181  cgcggccgcgtcgtctgcgac 201
            |||||||||||||||||||||
Sbjct: 5722 cgcggccgcgtcgtctgcgac 5742



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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 185      gccgcgtcgtctgcgacgtctgcgc 209
                ||||||||||||||| |||||||||
Sbjct: 11359213 gccgcgtcgtctgcgccgtctgcgc 11359237



 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 185     gccgcgtcgtctgcgacgtctgcg 208
               ||||||||||||||| ||||||||
Sbjct: 8951927 gccgcgtcgtctgcgccgtctgcg 8951904



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>gb|AF440695.1| Virus PhiCh1, complete genome
          Length = 58498

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 181   cgcggccgcgtcgtctgcgac 201
             |||||||||||||||||||||
Sbjct: 27029 cgcggccgcgtcgtctgcgac 27049



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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 185      gccgcgtcgtctgcgacgtctgcgc 209
                ||||||||||||||| |||||||||
Sbjct: 11355976 gccgcgtcgtctgcgccgtctgcgc 11356000



 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 185     gccgcgtcgtctgcgacgtctgcg 208
               ||||||||||||||| ||||||||
Sbjct: 8949762 gccgcgtcgtctgcgccgtctgcg 8949739



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>gb|AC134230.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBa0005J15, complete sequence
          Length = 159270

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 185   gccgcgtcgtctgcgacgtctgcgc 209
             ||||||||||||||| |||||||||
Sbjct: 67510 gccgcgtcgtctgcgccgtctgcgc 67534



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>gb|AY661566.1| Saccharopolyspora erythraea polyketide synthase gene cluster,
            complete sequence
          Length = 32299

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 133  ttcctgctggccgcggccccggcg 156
            ||||||||||||||||||| ||||
Sbjct: 1231 ttcctgctggccgcggcccaggcg 1254



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>gb|AC114420.11| Mus musculus chromosome 5, clone RP23-375E13, complete sequence
          Length = 155958

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 92     ctcaccggtgtctgctcctc 111
              ||||||||||||||||||||
Sbjct: 130526 ctcaccggtgtctgctcctc 130545



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>gb|DQ149987.1| Streptomyces neyagawaensis concanamycin A biosynthetic gene cluster,
             complete sequence
          Length = 99892

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 141   ggccgcggccccggcggccg 160
             ||||||||||||||||||||
Sbjct: 60608 ggccgcggccccggcggccg 60627



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>emb|CR674137.2|CNS0FJ4V Tetraodon nigroviridis full-length cDNA
          Length = 453

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 135 cctgctggccgcggccccggcggc 158
           ||||||||||| ||||||||||||
Sbjct: 131 cctgctggccgaggccccggcggc 154



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>emb|Z82188.2|HS151B14 Human DNA sequence from clone RP1-151B14 on chromosome 22, complete
             sequence
          Length = 128942

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 109   ctcctccatctggccatcct 128
             ||||||||||||||||||||
Sbjct: 96064 ctcctccatctggccatcct 96045



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>emb|AL161729.27| Human DNA sequence from clone RP11-435O5 on chromosome 9q22.1-22.33
             Contains the PTCH gene for patched homolog, a novel gene,
             the gene for a novel protein similar to a metallothionein
             protein (MT1) and three CpG islands, complete sequence
          Length = 189643

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 138   gctggccgcggccccggcgg 157
             ||||||||||||||||||||
Sbjct: 53478 gctggccgcggccccggcgg 53459



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>gb|BC023640.1| Homo sapiens, clone IMAGE:4890344, mRNA
          Length = 1429

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 138  gctggccgcggccccggcgg 157
            ||||||||||||||||||||
Sbjct: 1140 gctggccgcggccccggcgg 1159



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>emb|AL939109.1|SCO939109 Streptomyces coelicolor A3(2) complete genome; segment 6/29
          Length = 277000

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 142    gccgcggccccggcggccga 161
              ||||||||||||||||||||
Sbjct: 122901 gccgcggccccggcggccga 122882



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>emb|AL939108.1|SCO939108 Streptomyces coelicolor A3(2) complete genome; segment 5/29
          Length = 339650

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 222    cggccccgaggaccacgtcctcga 245
              |||||||||||||| |||||||||
Sbjct: 335453 cggccccgaggacctcgtcctcga 335430



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>gb|AC099506.3| Homo sapiens chromosome 16 clone RP11-22H5, complete sequence
          Length = 186318

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 15    aaagtcaccaagctctaccc 34
             ||||||||||||||||||||
Sbjct: 38036 aaagtcaccaagctctaccc 38055



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>gb|AE012496.1| Xanthomonas campestris pv. campestris str. ATCC 33913,  section 404
            of 460 of the complete genome
          Length = 12103

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 138  gctggccgcggccccggcgg 157
            ||||||||||||||||||||
Sbjct: 8722 gctggccgcggccccggcgg 8703



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>gb|AC116665.1| Papio hamadryas chromosome , clone RP41-119J13, complete sequence
          Length = 176602

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 141   ggccgcggccccggcggccgaggc 164
             |||||||||| |||||||||||||
Sbjct: 21182 ggccgcggccgcggcggccgaggc 21205



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>gb|AF196488.2|AF196488 Mycobacterium smegmatis hypothetical protein, complete cds; and
            cydABDC gene cluster, complete sequence
          Length = 7506

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 142  gccgcggccccggcggccgaggct 165
            ||||||||||||||||||| ||||
Sbjct: 6534 gccgcggccccggcggccgtggct 6557



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>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 237     cgtcctcgaaggcgctgagg 256
               ||||||||||||||||||||
Sbjct: 4215927 cgtcctcgaaggcgctgagg 4215908



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>gb|AC135209.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBa0071M09, complete sequence
          Length = 143595

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 185   gccgcgtcgtctgcgacgtctgcg 208
             ||||||||||||||| ||||||||
Sbjct: 76788 gccgcgtcgtctgcgccgtctgcg 76765



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>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome
          Length = 5148708

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 138     gctggccgcggccccggcgg 157
               ||||||||||||||||||||
Sbjct: 4524156 gctggccgcggccccggcgg 4524137



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>gb|AC120182.8| Mus musculus chromosome 1, clone RP24-501C2, complete sequence
          Length = 188506

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 389   tcagcagcttccaccagcat 408
             ||||||||||||||||||||
Sbjct: 24887 tcagcagcttccaccagcat 24868



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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 225     ccccgaggaccacgtcctcg 244
               ||||||||||||||||||||
Sbjct: 1743973 ccccgaggaccacgtcctcg 1743992



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>gb|AF031418.3| Pseudomonas putida FliK (fliK), FliL, FliM (fliM), FliN (fliN), FliO
            (fliO), FliP (fliP), FliQ (fliQ), FliR (fliR), and FlhB
            (flhB) genes, complete cds; and unknown gene
          Length = 10493

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 137  tgctggccgcggccccggcggccg 160
            |||||||||||||| |||||||||
Sbjct: 4094 tgctggccgcggcctcggcggccg 4071



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>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                           
Query: 178     atccgcggccgcgtcgtctgcgacgtct 205
               |||||||||||||||||| || ||||||
Sbjct: 2820186 atccgcggccgcgtcgtcggcaacgtct 2820213



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>gb|AC008572.6|AC008572 Homo sapiens chromosome 5 clone CTC-551A13, complete sequence
          Length = 170529

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 251   ctgaggttgctgttctgtgc 270
             ||||||||||||||||||||
Sbjct: 74384 ctgaggttgctgttctgtgc 74403



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>gb|AC093475.9| Mus musculus chromosome 1, clone RP23-54K22, complete sequence
          Length = 248543

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 389    tcagcagcttccaccagcat 408
              ||||||||||||||||||||
Sbjct: 216627 tcagcagcttccaccagcat 216608



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>gb|M63676.1|SERERYAA Saccharopolyspora erythraea EryA (eryA) gene, complete cds
          Length = 11219

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 133  ttcctgctggccgcggccccggcg 156
            ||||||||||||||||||| ||||
Sbjct: 1818 ttcctgctggccgcggcccaggcg 1841


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,989,417
Number of Sequences: 3902068
Number of extensions: 3989417
Number of successful extensions: 81530
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 80935
Number of HSP's gapped (non-prelim): 589
length of query: 572
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 549
effective length of database: 17,143,297,704
effective search space: 9411670439496
effective search space used: 9411670439496
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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